TCONS_00047173 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047173
Unique NameTCONS_00047173
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length818

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047173 ID=TCONS_00047173|Name=TCONS_00047173|organism=Clytia hemisphaerica|type=transcript|length=818bp
GCAATTATCAACCTGaagaaaagttaaatttcattttttctttattttct
gcGAAGAAAAATTTATcgaattttgttgatgtttgaGGTCGAGAGAAATG
CTGATTTTACGATGCATTTCCctgattttgacttttattttattgGTCAA
TGTACAAGAAGCGAAACAAGatgATTGTAAGGTGAAAGCCGACATAGTTC
TCCTTATCGATGGGTCTGGATCCATCAGCAATTTGGGTCAAAAGGAAGTC
GGACCGCAATTTTATCTCCGATTCGTCTATCCATCCATCCAGAAGTTGAT
CAAAAGTTTACCGATCAGTGAGGATAATATTCACCTTGGATTTGTTTTCT
TTGGTGCTGACAACTTGGAGAAAGTTGTCGAAGAGGAGGGTTGGTACCAG
GAATTAGACAGTGCGTATTCTTCCAAGGAGATCAGTACATGGTTCACCGA
AAGGagtaaaaaaggaattttcccAAGATTCAAATCAACCTTCACGGATG
AAGGAGTCGCCTATGCAACTAAAATGTTGCAACGTTCCAAAAGATTCAAA
GATGATTCAGTCAAGAAACTTTTGTTTATTATCACGGATGGTGAACCGAC
TGTACAAAGCCGAGCGGATGCGTCGatCAGTAAGTTCAAAGAGAACAATT
GGGGCGTGATGGCTTTGGGAATAGGTCAATTTGATGATGAGAAATTGAAA
GCTTGGGCCACCAAACCAGAATGGTTTTTCAAGACAAGTTTCAAAGAGTT
GACGAAAGTTTTGTCtggaatgaaaaatgaaatttgtgaAGTTGCTGAAC
AAACCGAACAACAAGACT
Run BLAST on NCBI

transcript from alignment at scaffold_123:95732..115901+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047173 ID=TCONS_00047173|Name=TCONS_00047173|organism=Clytia hemisphaerica|type=transcript|length=20170bp|location=Sequence derived from alignment at scaffold_123:95732..115901+ (Clytia hemisphaerica)
GCAATTATCAACCTGaagaaaagttaaatttcattttttctttattttct
gcGAAGAAAAATTTATcgaattttgttgatgtttgaGGTCGAGAGAAATG
CTGATTTTACGATGCATTTCCctgattttgacttttattttattgGTCAA
TGTACAAGAAGCGAAACAAGGTAACAAAACTGTTTTACTtaaatcgttaa
ttgcatcaaaatctaagaCCAACCTTAAAAACTGGTACTTTGAGCATGCG
CTGTGTTAAGTAAAGTCAGGGATAGGGTATCGCTATGGGCACTAATATCA
CTGAGGTTACACCCCCTGACATTCAGacacagttttttttctttgagaaT
CCCTCCTCATTTTCCTCTGTATCACAGACCAGGTGGTAATATGTAATTTG
TACGAGTCGTAGCGTTCccaacaaaaaacaaatgtCAGGATGAAGATTAT
GAAAGAAGAGTATATAGTAGTCGAGGTACTCGAGGATTGTGGGAAGGTTA
CACGCTTTGATAGTCGTGAATGGTGATGCAGTAGTATTGGTTTATGAAGC
AATATTTCGGATCagctaaatatttttatatatttttatatttcattttt
agatgATTGTAAGGTGAAAGCCGACATAGTTCTCCTTATCGATGGGTCTG
GATCCATCAGCAATTTGGGTCAAAAGGAAGTCGGACCGCAATTTTATCTC
CGATTCGTCTATCCATCCATCCAGAAGTTGATCAAAAGTTTACCGATCAG
TGAGGATAATATTCACCTTGGATTTGTTTTCTTTGGTGCTGACAACTTGG
AGAAAGTTGTCGAAGAGGAGGTATTGAAATCTCTTTTatttatctaaaaa
atttttgacaaaaggttACTTGTCCATCAAAGACTAGCCACATGAAATCA
ATGTTAGTTAGGAGAGGGTAATTTTTGTCACTGTACTTTTAAACGCTCCT
CCTAAAAACCAAAGAATATAATAAGTGCCCCAGTAACGTAGAAAGGAGGA
GAGCATTTTTATAAACGCCTCGGGTCCAGTAACGTAGACAGGAgaggcgc
aaaatttgtgtaggagagcatatttttatgacacagtaattatcttttta
tattgtAAATAGGTGATTACAgtttacagtgtcataaaaatctgctcttc
tACACAAaatttgcgcccctcctgtctacgctactggacCCGaggtgttt
attcgaagtaatacagtAGTACGTGTTGCACTAGTTTATTAACATTTGTC
TTTATAACAGGATTGGTATTACGATTTGGATCGTTCTTACTCCTCTGCAA
AAATAAACCAATGGTTCGTCGATAAAcgtcaaaaacaaaactttccaaaa
ttcaaaacaactTTTACCAACGAGGGAGTCGACTATGCAACTAAAATTTT
GCAACGTTCCAAAAGATTCAAAGATGATTCAGTCAAGAAACTTTTGTTTA
TCATCACGGATGGTGTACCCACAAAACCACGCCTCGCTGATGCATCGGTa
aaagtttcttgattttaAAGTAGAGtagttttatattattttattggacc
tacctggaggtcctataaattaacctctgtccgtccgtccgtccgtccgt
ccgttcgtccgtctgttaccagcttttctcaggattggctcattagtttt
ttctgatttttggcacaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTaaccgctatattttcttaatgat
tgtttttctccttattgctatctaagtttcatcatcaggtaggtccattc
agcatgttgcttgttttatattttattttatttatagttTTTTCATGCTC
GcatctatttttcaaaacaataatgtttttctaaattacCCATTGCTAAC
CATCCATCGTCCTGCGCGTGCTTGAAATAGTGCTAGGTCTTAGTAAGAAA
AACATCCCAAGAAACGTTCTAAACCTTACACGTTTAGCTGAATAGTTTTA
CATTGATAAGGATACACATGGTTTGTGTAACCAAGGTATAGTTAAGAAGA
CATTATTTTTGAGGCCGATTCGCATTCCTGATAACAAAACAAATCAGATG
GATGTCGGCTGGAGGCTAGGTTCGAGCATCAACCCTCTTCTTTAGGGATA
CCGAAGAACATGGTTCaacccatagatttataaaggccgaagggctagat
gtcgtgcttcggctgaaaagtgttaggtaggaaatcctacataggtcacg
tgacattacattTCAGCGCTtggccaatcagaagcttcgcgggttttcga
aaacaatagcaaaaatattttttctgatattcaatttttttatcctgTGA
TGGCACGACATTTAGCcagggctttataaatctgtgttTCAACCTTCCAC
AGTGTTAACACGTGCTATAGCCCGGGAGCTGGGTAGGTCAACTATGACAG
TCGTTTTTATATCGCTATTTTTGCATTCTGGTCCGTAAAATAGACACCTA
CAAGAAAATTTCGGACAGCAAACAAGTAAATTCGGAAACTTCAACAGGGT
GGCCACgcatgctggaaaaactggaaaacctggaaaaactggaaaaatgt
cttttttctgaaaactaactggaaaaactggaaataAGTACATTTTCCAA
ACAGGaaagctggaaaaactggaaaaacttttttgaaattttgattttaa
ctttaTGTCAGGAATTGGTTAGAATCATTATGTGGTTATACattaatatt
tttcataagATGTTATCTAGTATGAGTTTTACCATTTTCAGTTTAGTCCA
TCAGACATTCTTTTGTCAAAGCATAGATCTCTATgaccgatttgaaagaa
atgtcttttgaaaatctagAAGTAGATTTGAAAAACCTACAAAGATGCAC
TATGGGCTCTGTTAGccaccaaacttaatttaatattgtttagttcactt
ttttacaacctcttataaatgtactttcataaaatacctaatttcgAGAA
TTTCAATTATCgcaaagtgttataaaattcaaagtcatctaaattttatc
aagaatcccttcaaaaaattaagtttttcggggacctagaaattacacat
ttgaatttaaggtcattAAACCTATATCTTCCGGTACCTATACTTATAgt
aggtatgaaaaaaataatttttttcttcttggttaGACCCCCAAACAAAT
CTAAGGCCCTCAAAGTTctaatttaggatttaaagtgtattttgatttta
acgtacagttttgaaaatatttaggttcCAATAATCTAATTGCAACACTA
GTtactttgcagtgaatcactgCTCGAAATTGGagaccaaaaggactatt
tcataaaaagttattggagaaaaaccattttgtaggaaCCACAGACagcg
tactttcaacacaaaaagtttcggCCTAAAATTCCACCTACATTTTCAGA
TAGAGGGTACCTctattttttgtaggttttgAGGGGTATCCGCTGGTAAT
AATTTTGCACTCGCTTATAGCTGGAAAAAAGTACAGATTTTTGGGTGAAG
GCTGGAAAAAGGTGCATTTTCCAACTGAAAATACCTGGAAAAAAGGATGT
TTTTGACCCAAAAAGCTGGatttttcatctaaaataaGCGTGGCCACCCT
GTCAGACATAGTGCTACATGATGGTATACATTTGCACGCGCCTCTACGAC
TGTCATAGTTGACCTCCCCAAGCTCCCGGACTATATCTTAGTTTGCTTTC
ACGGCTTCTACTATATTTTTATTCCATATTTTtactttaataattttttc
atcCATCGCAACTTAAGGTTCGTAAATTCAAAGAAAGCAATTGGGGTGTG
ATGACTCTTGgtattggaaaatttgacactAAAAAATTGAAACGATGGGC
AACGAAACCTAGTTGGTTCTTTGCTGCCGATTTCAAAGACTTTGCAAAAG
TGTTTTCAGAAATGAAAGATGATCTTTGCAAAGGTAGGTGACCGTTATTT
TACCAAATGATGATGTATTTCtgcaatttttcatattttatacCTCGTTT
ATGAATTTCTATAGATCGAATGTTTGAATGGCTCTTAAAAGTGTTGTCCG
GTCTGTTGATTATTTGTCTGTAAATAGACCCGATATCTAtggaaatttca
acaaaattcatTGCTGTGGAGGAACTTACAGACAATCACAACAACTTGTG
CTCTAGTACAGAGTAACTGATTATTTATTGTTTTACATTTTAGTTGCTAA
AGACGTCGAAGAGCAAGAGTGTAAGATTTTCTTCATTTCCCATTTACAGC
CAACTGCTTTCAATCTTTGCATttgaagaagacattgcataacACGAGTA
AAATGTAACCCTTAGTTTCCGAGTGCCTAGAATTTCAGCCTGACCAAGGG
GTAATGTTCCGGGGGGGCAcacgatttcgaaacgacggtatgtgccgcgc
aaaatctgcttttcaaaatcgtatccttacagtgcagttcaatatggctg
aaaaggtaccctttcagtgcattttctcttgatttacccaacccttatag
tgcactgtatttctcagctgtaaatctgtgtgaaaaaagaagcttgggaa
attttctgttctagagaaaaactgagaaaaatattcttgtcagctgtaac
tATCAGAcattagaaactttttcaaacaaacgagaagtaaaaacctttct
ttttattatttgctttaaaattcgacccttgcagtgcaatctcgcagaaa
cacacccttacagtgcattttgagatgctgaaaaaccccacccttaagcg
cggcatatgacgtacacgtttttttttataaggaaccttaactttgctct
gagcctggagttccttatttttacagagaatttcagcctcaaagtttctt
atcgagttccttatttacatagctgctaagtttggattcgcaaaaattgg
attccttaccttaaaactttttttctttctgagcagctccttaacaattc
cttattttttggaccattttcagcctcgagttccttataaacgtgatcct
tataaaaaaaaacgtgtaggccaaatcatatgagtgcccccccccgggta
atGTCATACCCTGTCTTAGTTTCGGAGTTCGAACATGCTAGAAACGGTTA
TATCGACAGAAtgattacacccctgtctcacagccccggtggaacttttt
tctcatcagggataaaaattcctattgaaatcccaatggggatagaaatt
ctattgttccaagattcTGTGGGGATGGATTTGAtgtgcaatttttaaaa
attgaatttcgaatgggattAAATAAAAGTCgatttctcagtggggctga
aattctagggttttttcccaccggggacaaaatgtttgcaaaattttcca
gtgaggcTGGGGTCCCTGcgggtttgtgacacagggTTGTAAGACTATTC
gactttttatgaatttttggaTTCCCTATTTTTTCCAGTGATGGTTGCGG
AAGTGGAATATTGTAAATTGAAATACGCAAATGCAAAACATTGTTATGCT
TTCGAAGAATCCAAcaagaattatgtttttgattccATCACCTTCAATAA
AGCTATCATGAATTGTGTAAGTAAAAGTTCATTGTGTATTCTTTGTACGT
TGTAATAATCGGTACCATGTGATAATTCTACAGGGTGGCCAAAAAAATAT
GGTCAGCCAAAATTGTTCTACTTGTAGAGCAATTAGTGCGATAGGAATTA
TATTTCTCTTTTGTTACATAGTTGCGTTGGAAACTTCATCATAAGCGCTC
CCACTAGACACCTTTCTCGTGTCAGATACATAATGCATTCCACaataatt
tttcattgtttgaggCATTTCATTCAGATACTTCACTTGCCTTAATAAGA
GACCATTCCCTTATAAATAACATTTTGAACAATCTGGTTACGTATAATGA
ATGTAGTCTGAAAATTGATAGAATGTCTTCTTCTACCCCAGCctccaacc
tcgttccctgggcccggttgttcaaaaaatCGATTAGATTAAATCCCGAT
TAGCGCTAATCGCGATTTAATCTGGACTTATGCTAATCGGCcgctaatcc
acttttgaacaaccgggccctaTGCATTATCTGCTTTTGATGCTTACGCT
GGCACTTGTTTTGAGAACtagcatcagccaacaccagggttttctctggc
gtcaatcagtaacataaataaagcctgggatacacggggacgaggttgcc
cAGCCCATGTTAAGCTTAATATCATTTTACAATTCTTCCGATTCTGTGAA
ATGACTTTCCATTAATTCATCTACTGTGATGCTCATGTATTAGCGAGATA
ATTACTTCGATAACGAAAACaaattttcggaaaacaagCAGTACCCATCT
ATCTTCTTAGTAGAAAGAAAAATTCGctcccgggtgggcttgaaccacca
acctttcggttaacagccgaacgcgctaaccaattgcgccacggaagCTT
GAAGTCCTAGAAAAGGCATATAGAAATGTTTTTTAATCATTTGTATAAGT
GTTTGTCAAAGAACATCAAtcaaaataatgacgtcatattgTCAAATCTT
ATTAAGCAATTGTTTTTGTGGTTTTTCATATCAAATTGCATATCTCTCAA
TGAGATATAAATGTCCTCCTAGATGTAATTTCATAGGCCTTTCACCATGT
CCTGTTGTCGTCCTAATCTACTTTTAACTACATTTATATGTTTGTTTTAC
GACTTCGAGattgtatttcccaaggaaagtAGACTAAATCAATGTTTTTC
AAAACCATTTCTTGTTCTTCTTGAAATTGTTGAAACCATTTGCCAAGGGT
AATAGGCTGAGAAATTATTCCTTgtttttttcaaggaaaattaacTAAGC
TGGTCTACTTGTATACTTGTATTAGCCAAGGATATGAACTGaaacaattt
ttatttcaataaggAAAATTTACAGAAACTTCTATTTCCAAGTGAAAACC
CAAGGATAATAAACTAAACCAATTtcgtgtatttttcaaggaaaatgaac
cAAACCAATTTCGTGTAATTTCCAAAGAAAACCAACTAAGGCAATTTcgt
gtatttcccaaggaaaatgaacTAAGCTACCAAGGAAAATCAACTATAAA
CCACTCGTGTATTTCCtaatagactggagtcgtttataatgcatgtaata
ctaataataaacacaaataatgatacgggatttactttgtataaacgact
ggaagaatccggtgttccagccttatagataccgggcctagctacgcaga
aacttgcgtagcgagaaaacaatttatcaagcaacaacaNcagaaacttg
cgtagcgagaaaacaatttattaagcaaaaacaaactctcaaaataaaat
cagctcaaatgaaacatttttaacacacaaatccacacaaattttatttt
caagaattttttttgagctggaaaaaattttaattgcgatattgacactt
tttttttgtttggagttagtgcacaaaggtttctagacgactaaaattta
ctttttttgctttatttctaatatgtctgaattagtcgtctagcttgcta
gactaattTCCTAAGGAAAGTGAACTAAACcatttttttgtatatttccG
GAGGAAGATTATTTTTGCGAGTGACTTACTTTGTTGAGATAGTATCTTTT
TGACGAGAACTTATTTCTGGCGAATTTTTGCCAAAGTTAAGCGCTCGTGC
AAGGTTATATATTATTGTATGTATTAATTTTATATTTGCAGGGAGCGAAA
TTAGTGTCGGATGAGTTCAGAGGGTTCAAAGGACGTGTTCTTACTTTGAA
CGATAAAGATGATAAATGTTCAGCAAACCAATTTCCTTCCGTTGATTTGG
GACCTTTCAAAGGTATGTATTTTTGACCTCTGAAATCTCCCCTTCCGATA
TTGTTAGATGTTGgtaacttttttaaagaaaatatgtaCTCTAAAGGTTC
TTATTTTCGTTGTTTTCGAACCTGCGTGATTAGCCTTAATTTTAGACTCA
ATAATATTAATGAGttattagaaatagaaaaagcttaaaatagtTATACT
TGTCGCCAGGAACCATGGAAGgctgttatatttttctaattttcaaattt
tgcatttaTTATTTGGTGGCATGTTACCGCTAGAATCATTTTATCACAGC
TCTTGCTAAGGTTTCAGCGCCACAAGTCAGGTGTTCCTGCCGCCTTCCTA
TATTTCCAGTCAATTCGCAGATTAGCGAGTAGGTAGGCTCTGCCGTTAAA
GCCATTAAAGGACTGTCTAAAAGATTCCTGTACTAACCACTTGAAAGGTC
GATTCTATCTATATGTCTGTTTAGAGTCTATGTCAATTGTCAGAGGgttg
attatttttattttgaaactcaTTACCAGGTGAATGCAGTGCAGATCCAA
CACTTTGCACAAATGGAATCACCATTTCTTTTTGGttgaaaatggaagaa
aatgtaATCGCAAAAATGAAAAGCAAAGGATTCAACGAGTTTTACGTTTG
GGCCAGTGGTGGTCTTCAAATCAAAAACAGGTACGGGTACGGTTGTCAGA
TTTCTTTATTCATTGTCGTTCCCAGTTCTTGGGGAATTGCAAGGCCCGCG
GAATCGGTCAATTGATATTAGACTTTGTCAACTTATCTGTCTTAACAATC
GTGGGAGGATTTCCTCAAATATAGATGGAAAATAACCTGTTTTTTTTTAG
GGCAGAAATTTGTCAATTACAGCTTTAAACCCTATAGATACTTTCATAAC
TCAAATGTCTTCTATTGGGGATAGGAGTCTTCTTTGAGATAAAGTTGTCT
AGGAAACTTTTTAGGGCTCAATAGAAATAATTTACTGCTTCACTTTTTAG
AGGTTATGCACTGGTTTACCGAAACGGTGGCTTTGAGTTACATTTACAAC
ACAGTGAAGGTGGTCACGTgattaaaatgacgtcatttgtttaTTCAAAA
TGGTTCCACATCTCTTTCACTTGGTCAGGTAAGAGATGCATATTTTCTTT
TGGTTAGGTTCTCACATAGAGATTTGTCATAGCAACGCGTGTATGTTGGA
ATGACGCAATGGCGGGAGGGGGAGTTTAGGGGGTAGCAACTNTTCGCATA
GAGATTTGTCATAGCAACGCATGTATGTTGGAATGACGCAATGGCGGGAG
GGGGAGTTTAGGGGGTAGCAACTCCGCGCGGCCATTCCGTCAATTTTTCC
GCAATTTTCTTCACActgttaaaatgaaaaatgaaatttcttttcAGTCG
AAAATTCTgaagattttgactttttggttCCAATTCCGAAATGTCGGAAT
TCCGATCGATTTTTTTCGCTTGAATTCTCCTGTATCCCCAGTTTTCTATC
TTTGATAGTGCAGCTAAAGTCAGcgattttgttcaaattttcggTGATTT
TCGCACAAATACCCGTTCCTCCGCCAAACGCAAAACCTCTCCAGCTATTA
AAACTCAAACTTAAAAACTTGTCAAGTTTACCTAATAATTCCAGGCAACT
GGTGTACTATCTACATTTCATATTAGTTtaagtattttctttattttgat
tttcaattacCTCCATGATATTGAAAACTTTAAATATCTTTTATACAGCA
TCAGAAGGCCTCCGTTACTACCAAGATGGTGTTTTAAGTGGATCATCAAC
CTCCTACAGTAAAAAATTTGCTGCTTCTTCGCAAACATCGATGACTATTG
GGAGACTCAATAACGGtgtaaaaaatgcaaaacaaaATTCATTTGCTGAC
TTCAGAATGGACGACTTGGTGATTTATGAACGTATTTTGGCTCTCAAGGA
GATCGAGTATATGGCTGGGAAGCGTAAGACAAAATTAAATCTTTGGGAGG
AGAGTACTATTTTGGTGACAGCGGGGTATAACGTaggatagatagataga
tagatagatagatagatatgccctccgatgcatcggaatgggtcctaccc
acggtggagtaggaatcacagcgcaagcagacattgcNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNagagccatggtgtataccacgacactcgaactacacgggagaacg
gatgtcctcgcaggtgtagaacctcctgAGTGTCAcggcacaccacaatg
tctgaaatatctacccatactcttgtatcagagttatggtacccaattcc
cctcaaatggcatgggttgacccgggcgaaggagcattcacttgccaagt
gaatcgtagtgccacggtgggtatcgaaatcgagcctcctggacagaagt
caagcacgataaccactacaccactACGCCTACACGGGGTATAACGTAAT
GACTTGATGAAGTCTAAATGAAGATTAAAATGCACCCTTTTTAGCAATTA
TTCTATTACGCTGACACTGTGTCAACATTTAAAATAGAGTACTTAGTGTG
AACGGACCTTTTTTATGTTATTGTATTGAGGGTCAAGATTTTTATTATCA
actaaaatctaaaaagttgaaatttgtgTCTCCAACTAGAATTTAAATCT
TTCAAATAAATCCATAATGAATTTTCGAATAAATCCTCATTTCAAACCGT
TAAAATTTATTAATTAATATAATCTTATACGAACTTAAAATTTGGGATCT
GTTCAAGACTTCAAGGTTACAAACGAAGAAATCACTTCTCATTTCAGAAT
ACGCATTGACTTCGAATATTTATTATTACGCACGATGGTTTTGGGCATGG
AAACGATTATGGCACCACCACGAGGGTAATGGAGAAATCATGTACTCGCC
AATGTACTTCCAACAAGATTCCATCAATAATGCCGGAATATTAAAGGTAC
ACCTTTCATTTAATGTCTTAATGAGATAATATCAATGTTAATactaaaac
aaacttttttatcagtaaaattattattaaatcAGAACAATCCATCACCA
ACATTATGAAAGACTTTCTTATTTCCGAGGAAACATTTTAGGTGCATTTT
CGGGGAATTTTCCGCTTTTTCCTCCGGCGGCATATCggcaaaagtttttt
tcctGCTTATACAATAGTGTAGAGAAAAAGCAACGACCGAGCGAGAACGT
TCCTCTTGTACATAACCAGAGTGTTGGCTATTTTTCCGTTGTAAAgtgga
aattggaaaatttgccTGAGAATGAGAAAGTTAAACAATTTCACcatctt
tattttgatattcCCGTGTGTTTTCCCTCTCTTCGTTATTATTTGACTAT
TTTACAGAACAAACCACGACTAGAGTTTTCATCTAAGAGAGGGTACCATT
TACGGATCAGAGAAGCAACTTATGCATACATGGGCGATTACAAAGGTAct
gaaaggttttatttttacaaagtgttcaaaatatgtttcatatcaggacg
gtgtctccctattgctgtattatgctgatataagcaaaaaatgtttttct
tctcctctttttgaccaatcttgctccacatccgtgtcaattcaatgtga
aaaagcttgtaaattaaaattgatgagtaagcgaACGATATCActctatt
ttaaaaacaaaacctctaaAGTTAGACGTTTATCATCCTTGTATCCAAAA
AAGACCATTTACCCACATACATAGAAAGTTATGATTTCTAGAAAAAGATC
AGGGTCTGGCCTTGAacttgaattgaatttttttttcattttagttctGA
TAACACAGAGCCAGGCAACGTAATTTCTTTTACCCAAATCCATATCCTAA
TAAAAATTTCTCATATAGGTCTTAGTACATATAATATTTATTGGACAATT
TCCCTCTTAAGCCTTTAGTCTGGTGGAGATACATCGACGATGTCTTTTTG
CTTTGGGAACACGGGCAAGAGTCTTTAAACGAATTTCTGACATATCTGAA
TGCCGAGCATCCTTCTATCAAATTTACGGCAGACTTTCCCGACTCAGAAA
TCAATTTCTTGGATGTTAAGGTCAGTCGTAAAGGGGATAAGTTAGAGACC
GACCTCTATGTAAAACCAACTGACACGCACCAATATCTTGATGCAACATC
TTGCCATCCGGATCATTGTAAGACGTCTATACCATATAGTCAAACATTAA
GGCTAAACCGTATCTGTTCGAAGCCCGAGTTGTTTGACAAAAGATGCGAT
GATTTGGAAAAGTGGCTACTCAAGCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNGCAAAttgctctagggagaccaggctgtaaatc
agaacataaaatatctaaaactagactgtgaaataatttacagcctggat
atccaggctagtattatacctgatgaagttctgaaaatagaacgaaatat
cgtaaaaaacaaactgtgttgattttacttttttgttcacttaaTAAGAA
AGACTATGTACTATGCTTTGGCATTAAATTGCGTCAAGAAATCAAGACTC
TTCAACAATTCAATGTTTGATACCTTAAGttaaaaatatatctttttttt
cttgtatttcttTGAAGGAACTTGTATCAGTGATCCAGACCTTTGTTTAC
AAGCTTCTGATGGAATGCAAAATTTACCGAGTACAATGCAAAAGAAAACT
CTTCAAGCCGGTCTGACCGTCTCCTTTTGGCTGTCCAGCTACCAAGGGTC
AAATGGAAAAGGCGGtgcaattaaaaaatattattacatTTCTAGCGGTG
GCAAAATGAGCAAAGGTGAACATTTTAGTAACCCAGTTTTGGATGACCTA
AACTCTTCATAAAGCCTTATATCTAAACTTAGTGCTTTttctttggaaag
gttgaaTAACGAAAATGCACTATTTGACGTTNCTTATATATCTAAACTTA
GTGCTTTTTCTTTGGAAAAGTTGAATAACGAAAATGCACTATTTGAAGTT
TGGGCTTTTGTAGGGACATCTTTAAAGTCCATAGAGTCCTATAACTTTTC
GTTCAAAGATATTTCTAGGTGAGCAAGTAGGAGTGGGCTCATATGGAGCT
TTTTTAGCCGCGATTGTCTTAAATTTATACCCAAATACTCATTTTCCTCT
TCATTTCAATTCAAGGTTTCTCGTTATATTATGATGGGAATGCACAGAAA
TGGTATCTTTTGCTTCGAACGAAGTCTCACTATTACGAAATAGCCTTCAC
TGGAATTACATTCGCTACGTCAAAAGAAGAACAATGGGTTTTCTTCGCTT
TCACTTGGTCACTTGAAGGTATGGTCTTGTAACATTTTAAAATCAGAGGC
CTTTTACTAATAAAATCACTGTTTTAACTTCACACGAAAAATCTAAACTT
TTTAATTGACGATGGACGTGACTTTTCGAAATATATCTTAATTTGTTTAC
ACATTGCAGTTTaagtttttctgtaaaaaatcttaGTTACATCCTAAGGT
ATTTGGACTTAAAATCATGTTGCGTTTTTTTGGGTCACCCCGGTAAAATC
TTTGCTGGAAAAAGGAcatttcccgggggggggggCAGCCAAGAAAAAtg
actgacgggtatgtgcagGCACTAAGGGTGTGTTTTCAAGGCatccgaaa
tgcactgtaagggtgggttATTTGCcgcctgcactgtaagggtacgaatt
actaaattctaacaaaaatgaaattgtccagtCCAAAATCCGACTGCCTC
CCCGGGGGACATTTATAAACGTCATGGATACAAACTGTGAATTTGCTACG
AATAAATAATATTTTCCTTccattaaatttgattttaaataacAATGAAT
TTTACGAATCCACATCGTTAAAAGCCATAAGAATAAAGTTTTAAAGTCTT
GACGCAGTATTATTGACATTTAACACTATCAAGTCTTTAGCAACACGGCA
AGAACTTAGTCTACTATTTCATTGAAATGAATAACGAGGAGAAACTTTTC
TTTAACATTGCAGGTGGCGTAAAGGTGTATGTTAATGGAGAAAACATCCA
ATCAATGACCCCGAAAGAAGCCAAAGCAGAACCCACCTCAAAGGACCAAT
TCACCAAACTTTACATTGGCACTAGAAATGATGAACCGCAATTcctgaaa
aatgttttctcaaTGAACTTATTGGCTATTTATTACTATGAACTACCCAA
AGAACTTATCGTCAAACTTTACAATGATGGTATGTCAAGTGCTTAGGATT
ATCTTATTTGCGTAATAAGGGCTGGCGTTAGGGATCGGAATTAAATTGAG
CCCGGACtaaaaatggaatgaaatgaGCTTTGGCGTATTAAGAATATTAA
GGGCCGGCTTAAAAGGGATCGGCGCTAAATTATGGCCAGCGTAAAAAAAG
CCGATAAGTTAGTTATTTTCGTTAAACGATCGATTTTTGTGGAAACGTGT
TTAAGATTTCCAGTCAAGACAAACATTATCATGTCAATGAAACAACTGAA
TTCCACTTCTCATTAACCCAACtaatgttttaaatatttccaTGATTCTT
TCTGTAGAAGATGATAAGGAAGCTGAAAAACCGGAAGTGGTTGCCCCTCA
ACCTCAAAAGCCTGTGCCAGGTAAAGCATCTAAAATATTCAAGTACAGTC
GACTCGCGTTTATtggaacttctattattcgaatctttctataattcgaa
cttattctcaGTTTCCATCAGTGAGAAACCTCTCTTACAATACTTTCTAA
AATTCGAAtttctctgttattcgaacaaataagattccccgtttCAGTTC
GAATTATAAGAGTCAACTGTGTATGAATTAGTTAAAAACATCTAAATGTC
CCGTTTACACCTTCTAAACCATCAGAAAGTTTCTGGAAAATAGGTAGtag
tacagtggagtctctttaactctaGTTTGCTGGTCGAGTAGAATTTTata
tacaaaacaacggtaaTTGATTCGATATGACTTCTCTACAGTAAGTACTA
AGTAATAGTCTTATGCCGTACTATATTCAGCACGAGAAGGGGgtttataa
taatattttagtgaaaggaTTAATTTTGGATATGATTTTTATGTAGCGAG
AAAACGTCATAGAATCGATGTTCAGAAAGCTTCAACTAAACTTCGAACAA
ATGTTCCATTTCCATTTCATCCTTTATTTTAGCTCCTGGAACCCCAACGA
AAGATTNATCGATGTTCAGAGAGCTTCAACTAAACTTTGAACAAATGTTC
CATTTCCATTTCATCCTTTATTTTAGCTCCTGGAACCCCAACGAAAGATT
GTTTAGTGAAAGCAGATATTGTTCTCCTTATCGATGGGTCTGGATCCATC
ACCAATTTGGGTAAAAAGTATGTCGGACCGCAATTTTATCTCCGATTCGT
CTATCCAGCCATCCAGAAGTTGATCAAAAGTTTACCGATCAGTGAGGATA
ATATTCACCTTGGATTTGTTTTCTTTGGTGCTGACAACCTGGAGAAAGTT
GTCGAAGAGGAGGTATGGTAATTTAAATGGTCTTGACCAAAATACAAgcg
ttaaaaatttttgaatttgagcAGCGTTCACTGGGTGTCCACAAATCAAT
AAATATTGATAACCTTTTGAATCTAGCTTTAAAGCTtcatttgaatttct
ttttaactGTAGTAAAGTAATAACGAATTTGGGTAATTCTGAAAACAAGG
TTGCGTAACCCATGCTGTGATGATCAGGAAGGGAACTACAAGGATTTCCA
GCTCCTAGCGCTGCTCATTTCTCTCAGTTTACTGACATCAATTGTAAATC
GTGTGCTTACATTTTACCGCGTTTATTATCCCTAACGTACGATAGCACCG
TCTATCCCGGTTACTGCCGTTTCATTAGTTTCTCCACTTGTGCTACTTAA
AATGCACTTGTTTCTctattcaatattttgaaaaatttcgtttttctcCT
TTCTCTTTCAGGGTTGGTACCAGGAATTAGACAGTGCGTATTCTTCCAAG
GAGATCAGTACATGGTTCACCGAAAGGagtaaaaaaggaattttcccAAG
ATTCAAATCAACCTTCACGGATGAAGGAGTCGCCTATGCAACTAAAATGT
TGCAACGTTCCAAAAGATTCAAAGATGATTCAGTCAAGAAACTTTTGTTT
ATTATCACGGATGGTGAACCGACTGTACAAAGCCGAGCGGATGCGTCGGt
aggattggtttaagattgtcattttacggattttttattgaaaaactcgg
AAAATTCTTGTTTGGCACAGAAATTTCGAGATTCAAAAAGTTCCGTGTTC
TTTTTACCAGTAtccttttttattcaatgtttttaaaattattttttggg
tattttagatCAGTAAGTTCAAAGAGAACAATTGGGGCGTGATGGCTTTG
GGAATAGGTCAATTTGATGATGAGAAATTGAAAGCTTGGGCCACCAAACC
AGAATGGTTTTTCAAGACAAGTTTCAAAGAGTTGACGAAAGTTTTGTCtg
gaatgaaaaatgaaatttgtgaAGGTATGTACACGTTTCtgttataagag
caaactaagTTGGAAAGGAAAGAGCACAAGgcggcttcgatgaccaaaat
atcaagaacattGCTAAGGCTCTGCAGACAATAAAAAACCGATTTCTcag
aaaattgcacaaaaatactcacaaaatgttgcaattaaaaagcttaaaac
tcaaaaatttaggaatattgaaatattatattgttACGGAATGATATTTT
GGAAGATTGgttaagatgtttttttttacgaAGATGATGTTGTTGGTGTT
CTCTGCAGCAAAGCAAGCAAACCATGAAATACAAACCCTCCATTTTGAAT
GtggattttctttttctgaCTTAAATATAATTGCAATCCGTCGCCATTGG
TTATAAATAAAAACTAACCCCACTCATTTGAAAGGACGAAAATCAAGAAC
TTTGTCTTTTGGTCACCACCTTGTTAATAAAACATGGTTTAACCAAGTTT
CGTAGGAAAGGCTCTAAAACTTTTTGGATTTGCTGGGAAaaaagttgacg
ctctctaattcgaattttcaTCGTATAAGGGAGcgcatcgaatagtagaa
cgtcgaattagagagaatcaaCTGTATATCTTAGCTCAAAAACCGATAAA
TTTGATATCAATTATTTGAAACAATGTTATTATTCATTTTTAGTTGCTGA
ACAAACCGAACAACAAGACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030069XLOC_030069Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047173-exon-scaffold_123-1491911889:95732..95901TCONS_00047173-exon-scaffold_123-1491911889:95732..95901Clytia hemisphaericaexon
TCONS_00047173-exon-scaffold_123-1510915933:95732..95901TCONS_00047173-exon-scaffold_123-1510915933:95732..95901Clytia hemisphaericaexon
TCONS_00047173-exon-scaffold_123-1575043694:95732..95901TCONS_00047173-exon-scaffold_123-1575043694:95732..95901Clytia hemisphaericaexon
TCONS_00047173-exon-scaffold_123-1491911889:96334..96551TCONS_00047173-exon-scaffold_123-1491911889:96334..96551Clytia hemisphaericaexon
TCONS_00047173-exon-scaffold_123-1510915933:96334..96551TCONS_00047173-exon-scaffold_123-1510915933:96334..96551Clytia hemisphaericaexon
TCONS_00047173-exon-scaffold_123-1575043694:96334..96551TCONS_00047173-exon-scaffold_123-1575043694:96334..96551Clytia hemisphaericaexon
TCONS_00047173-exon-scaffold_123-1491911889:114643..114879TCONS_00047173-exon-scaffold_123-1491911889:114643..114879Clytia hemisphaericaexon
TCONS_00047173-exon-scaffold_123-1510915933:114643..114879TCONS_00047173-exon-scaffold_123-1510915933:114643..114879Clytia hemisphaericaexon
TCONS_00047173-exon-scaffold_123-1575043694:114643..114879TCONS_00047173-exon-scaffold_123-1575043694:114643..114879Clytia hemisphaericaexon
TCONS_00047173-exon-scaffold_123-1491911889:115040..115205TCONS_00047173-exon-scaffold_123-1491911889:115040..115205Clytia hemisphaericaexon
TCONS_00047173-exon-scaffold_123-1510915933:115040..115205TCONS_00047173-exon-scaffold_123-1510915933:115040..115205Clytia hemisphaericaexon
TCONS_00047173-exon-scaffold_123-1575043694:115040..115205TCONS_00047173-exon-scaffold_123-1575043694:115040..115205Clytia hemisphaericaexon
TCONS_00047173-exon-scaffold_123-1491911889:115875..115901TCONS_00047173-exon-scaffold_123-1491911889:115875..115901Clytia hemisphaericaexon
TCONS_00047173-exon-scaffold_123-1510915933:115875..115901TCONS_00047173-exon-scaffold_123-1510915933:115875..115901Clytia hemisphaericaexon
TCONS_00047173-exon-scaffold_123-1575043694:115875..115901TCONS_00047173-exon-scaffold_123-1575043694:115875..115901Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_123supercontigscaffold_123:95732..115901 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.209382	0.225048	0	0.251476	0.286241	0.108133	0.299588	0	0	0.0588161	0	0.171241	0.32624	0.113181	0.0295344	0.0909794	1.47352	1.95972	0	0.308974	0.601572	1.0696	0.423631	0.931947	2.58605	2.31405	0.432979	0.143267	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047173 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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