TCONS_00047211 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047211
Unique NameTCONS_00047211
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3991

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047211 ID=TCONS_00047211|Name=TCONS_00047211|organism=Clytia hemisphaerica|type=transcript|length=3991bp
aaaagaaatataaatcaatatGGCGTCGGTGGGAAATGGAAGTGGGATGT
TCAATAAAACACGTCCAAAGATCCCTGAAATTGGCGTGGATTTGAACAAG
CCAGAACAAACATTCAAATTTGTTATGGCACTATGTGCAATCATATTTAT
CTTGGCTGTAGCATTCTTCACTTATGTCCGGACAAAATTTCGCCAAATCT
ATGCACCAAGATTATTGCTTATTGAGAATAAGATGTTTGGTATTGGAAAT
CTACCAAAGAAATCATGGTTTTCTTGGGTGACTTTGTCATTCAAAACCAA
AGATGAAGATATTTATGTCTTTGCTGGATTTGATGCTTTAGTATTTATTC
GATTCTTACGTCTCATGCTTAAATTTGCGCTATGCACTATGCCATATGGT
TTAATTGTATTGCTACCGTTGAATGTTGTTGGAGGTAATAAACTAGATGA
TGGGCTCAATAAATTGAGCATGTCAAATATTGTGCATGAATCAAAACATT
TATGGGCTCACTGGGTCGCAGTCTGGTTTTATTCATTACTTGTGTGTTAT
TTTTGTTGGAGCGAATGGAAAGTGTATATTCAATATCGTCAACGGTATCT
GAAGAAGGGTCTTCATCACCAGTTTGCTCTTCTTGTACAGGAAATTCCTG
ATGAGCTGAACGAAGATCATTCACTTTATGAGTTTATGGACAAATTGTTC
CCGAATAAGATTTCAAGTGTGCATGTCGTAAGGGATTTGGATAATTGGAG
AAGCTTAGTGAAAAAGCACGATAAATTTCTTTTGAACTGGGAGAATGCTA
AGTTTTACGAAGAGAGTGGAAAAGCAAGAAGACGGATTCGTAAAAGTTGC
TGTGGCGataaagttgatgcaatcacTTATTATGAGAAAGAACTCGAGCT
TATTCAAGAAGATCTGTTcactgaaaaatcaaaagacgGAAAGGAGGTTC
TGAATTGCGCTTTTATTGTCTTCAAATCCATCAAAACTAAAGAACTTGCA
CTGAAAAGTGTTTGGCGCAAAGAGTCAATGACTTTTTCAAAATACCCTGC
ACCACAGTCCTCAGAAATAAAATGGAGAGCTTTGAAGTATCCTTATACTG
TCAGAAAAATGTTGGAGCTGGTAGGCTTTATTACAGTGTTTGCTTTGGTG
CTATTTTGGGCTGTCCCTATCACTTTCATATCAACCTTGACCAAATTGGA
GTCTTTATCTAAAGAATTCAAATGGCTTGACTCAAtACTGGCGGGATCAT
CCAAGATGTTCATCAGTTTTTTACAAGGCGTATTACCAGTCATTCTCATC
GCCGTCTTTTATCTTATTCTTCCTTATATTTTGTTCTTCATCGCAACTAT
TCAAGGATTATTCTCAAACAGCCGTTGTGCTGAAATGGTGTTCAAATGTT
TATTTGTATTCCAGACGTTCAATACTTTCTTCATCTACATCTTATCCGGA
TCTGTTCTCCAAAACCTCTCGCAAATCGTTCAAGAACCTTTCAAAATACC
TAGCTTGCTAGCTAAATCGCTGCCCAGTCAATCAGGATTTTACGTCAACT
ACTTGGCTATAACCTCGTTTGTTGGGTTAGCCATAGAACTCACACGTATA
TGGCCGTTGATTCGCATTTCGGTCACCTTGAAATGGTTTGCAAAAACGTC
ACGCCAAAAGCTGGAAGCCTGGAAACCGAAGCGTGCTGAATATGAAGTCA
TGGTATGCTGTACATCAATATTCACAAGCATTGTTGTTCTTCTTAATCGG
GCTCTCCTTCTCGGTGCTCTCACCCATCATCGTGCCCTTCGTCGTCTTGT
ATTTCGCCTTCGCATACGTCGTATGGATGTATCAACTGTTACACGTCTAT
ATTCCTGACTATGATCACGGTGGCCGGTTCTGGACTTTCGTTTTTAATAG
aatgatggtatgcgTTTTGGTCTTTCAATTATTAATGGTGGGCGTGTTCT
TGCTCAAGGAGGTTTGGTTTGCCGCTGTCTTTTTAGCGCCGCTCATCATT
GTTACGGTGGCATTCTGGCTTTACATTAACGAAACATATCTCCCGTACAG
TCGCTACTTGACCGTCGAAGAAACAATCGGCTTGAAAGGGGCAGAACAAC
GATTTCTAGAGGAGGTGAAGAATCGATACATCCTCGATCAAACCGTTCCC
GAAGTATTCGAGTTGAGTACAGACAAACAACCATCGAGTGAAGATTATAT
TCCAATCGATTCAATCAATAATCCGGATACTGACGAAGAAAATCCACAAG
ACATGAAAGAGAGCACGCGACTGCTTGGTATCTGACGATTAGGTCTGGAT
TTATTGGTTAATCATTTTTGGAAGATGTTTGAAATTGAATGGCTAGTCAA
GTTAGTACTGGACTTAAAAGATAACCGTACAGATTTCCGGGTAATTAATC
TGATGTTCGTTACTGGTGAATTTTCTGCGAGTTTAGTATGTAACTTTCGC
GTCGAAATTTCTGGATGTTAATTaatgttgttttgttacttCTCAACCCT
GTTTAATGAGATTTAATGTCTAATTTGACATTACCCATTTTCAACTGGCA
AATTCGTGGAGAATTTGAAGGCGATGAACTTAAGTCCTAGTGTAGTCTCT
TCACGTCctacaaaattatttttgttagtattttccAAAGGCGTTCACCT
TTGAATTCGTGTAGCTCTATTGTGATCTTGTGGGGTAGCACGATTTTTCA
TATTATTCATATGTTTTTTAAcggttttattttctttttttcaatattgt
aCATAGTAATGAAGAACATTATATATTGTaatttttcctgaattttctaG
ATGTATTATATTATGAAGCTTTCTAACAGCAAATTGAGAATAGGTTTGTC
ACAACAGAAGTTGTCACTCAAAAAGATTGGAgctgaaaatgagtaaaatt
ttcaaagattaatGATTTTATACATACATGACGATGATGTCATTATTAAT
TCAAAgagttttcataatttttaaattcgAATAGTCAATATcatgtgtca
aaatttgaacatAATTAGATAATTAGTTCAccaataaattttgagtttta
aacgatTTCAGCCCCGGGTTTATGTTATGTTTCACAATAAACCCATCTGG
ACAACCTATATGACACttctaataaaattttattaaaagccAAGAANctc
tagtttttccgacccttacagtgcatttgaggtgccttgaaaaagacacc
cttagtgcccgcacatacccgtcggtccttttgcccagctgccccccccg
ggattaAAAGCCAAGAAGTTTCAAATCGTTTTGGGCGTGGTGGTAGGCTC
TACACCCTAGGCTAGGGCAAAAAGAGTTTTGAATTTGTTCCTTGTCTTTT
TAACATGAGATATTCTATAATGCAAACTATATTTTTAACATGATATTTAT
CTTTCGTTCTGTATCTAAATAGTTTTTTAGAGGGTAAACATTCATTGTGT
AATTCTGCAAACATTCGTGATGATGTGGAAACTTCTGACGGTCTTCCATA
AAACAAATTGGGAAAAACTTCGGGGGTTTTACTGACTTATTATAGAGCAA
AACTTTGATCCGTtgggaatagaccttttcataaattacgtcacgagcaa
cgcttacctcgctttcaaaatattgctattgtGATTGAATCCCAGAGGAG
CTCATAACAAGTCTTCTCTTTTTGAAAAGTAGCACTTTAAGCCCCAAGGA
AcataatcaccttggtaataatttcaaaacgaggcagtggTTGCACTCGA
AATAATTTATGAAAGGTCTATAAGTAGTccgaaaacgaggcaagtgttgt
ttatgacgtaattttgtATAATATGGAAAGACCTCTTCATCACAGgacaa
aaaattataataaaccACGTTCTTAGAGTGTCAATTTTAAACCATATCGT
GTTTTGTAGGGACATTGttgtatttttctatttttttcctaAATAAGAAT
TTCAGATATCATTTTCATCGGTAATAATTTCAATACAGAAA
Run BLAST on NCBI

transcript from alignment at scaffold_123:353019..362054+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047211 ID=TCONS_00047211|Name=TCONS_00047211|organism=Clytia hemisphaerica|type=transcript|length=9036bp|location=Sequence derived from alignment at scaffold_123:353019..362054+ (Clytia hemisphaerica)
aaaagaaatataaatcaatatGGCGTCGGTGGGAAATGGAAGTGGGATGT
TCAATAAAACACGTCCAAAGATCCCTGAAATTGGCGTGGATTTGAACAAG
CCAGAACAAACATTCAAATTTGTTATGGCACTATGTGCAATCATATTTAT
CTTGGCTGTAGCATTCTTCACTTATGTCCGGACAAAATTTCGCCAAATCT
ATGCACCAAGATTATTGCTTATTGAGAATAAGATGTTTGGTATTGGAAAT
CTACCAAAGAAATCATGGTTTTCTTGGGTGACTTTGTCATTCAAAACCAA
AGATGAAGATATTTATGTCTTTGCTGGATTTGATGCTTTAGTATTTATTC
GATTCTTACGTCTCATGCTTAAATTTGCGCTATGCACTATGCCATATGGT
TTAATTGTATTGCTACCGTTGAATGTTGTTGGAGGTAATAAACTAGATGA
TGGGCTCAATAAATTGAGCATGTCAAATATTGTGCATGAATCAAAACATT
TATGGGCTCACTGGGTCGCAGTCTGGTTTTATTCATTACTTGTGTGTTAT
TTTTGTTGGAGCGAATGGAAAGTGTATATTCAATATCGTCAACGGTATCT
GAAGAAGGGTCTTCATCACCAGTTTGCTCTTCTTGTACAGGAAATTCCTG
ATGAGGTTTGTATGATTCTCTATGACTCTATTctagaaataaatattttt
attaaaatttgaggCCGGGCAGGGAATTATTTAAAGCTTCAGGGCTCTTC
TAGAAACACCTTAAAATCAAATTGCTTGGATCTTTAtgtaaaggttttat
ttttacataagtgtttccgtttcatatctgacacatatttcatatcagga
cagtgttttGCTATTGTTAggttatgctgatataagcaagaaatgttttt
cttttcttctttcggACCAATCTTTCTCCACATTCGTGTcgatccaatgt
gaaaaagcttgtgaattaaaattgatgagttagcaaacgatatcactctt
atttcaaaacaaaacctttgattcaagattttaaaattcaagATATTTTG
TGTTTAGCTGAACGAAGATCATTCACTTTATGAGTTTATGGACAAATTGT
TCCCGAATAAGGTAATAACAATTCTCACTTTATTCATTGTCCTGTTAAAA
GTGAAACAGTAATGAGACAAGACCTCTAGCCTTTATTCCTTTTCTAACTG
CGATTTAATAcaattaaatttgatattttgctaATATTTTAAATAGTAAG
ATTTTGAACAACATCCTTATATAAATAACAGGTTAAACTAATTTTCAATC
TGTCTTTTAGATTTCAAGTGTGCATGTCGTAAGGGATTTGGATAATTGGA
GAAGCTTAGTGAAAAAGCACGATAAATTTCTTTTGAACTGGGAGAATGCT
AAGGTATGTTCTCACACATTATATTATGCCATAAAATATACTATACTTTT
AGATAGGGAAATCTGTACTGTCATAAAGACCACGCTATGAGATATAGAAA
TTTTGCTAAATTCACAAACCATACAAAATCTATGTTAGATTTTTCATTGT
ACAAACATTCAGATTTATATTGCAATTTGTTTTCATTATAGTTTTACGAA
GAGAGTGGAAAAGCAAGAAGACGGATTCGTAAAAGTTGCTGTGGCGataa
agttgatgcaatcacTTATTATGAGAAAGAACTCGAGGTATTTTGATAAC
AACTCAATATTTTTACTACTCAACTTTCTTCTGATTACAGCTCACAGAGA
ATAccctttttgataaaaatccatacaaattttctttcatattcaTGTCT
GCCTTGGTTCACAAGACTCTGTTTTTCCCTGAAACTTTGCTTTGCCAAGG
ATGAGCTTATTGGATATTTTATACAGTTTCTTACTGTTTCCCTGTTCAAT
TTAACTTCATTAAACACTGTAAAatatttgtttgaatttttatttaataa
agCTTATTCAAGAAGATCTGTTcactgaaaaatcaaaagacgGAAAGGAG
GTTCTGAATTGCGCTTTTATTGTCTTCAAATCCATCAAAACTAAAGAACT
TGCACTGAAAAGTGTTTGGCGCAAAGAGTCAATGACTTTTTCAAAATACC
CTGCACCACAGTCCTCAGAAATAAAATGGAGAGCTTTGAAGTATCCTTAT
ACTGTCAGGTACGTGTTTTGAGTAGTAGAGCTCTCATTTATAGTGGGGTG
ATAGCCAAATTTTTACTCCATAAATAACAGTCTCAAGCCAAAAAGTCGTC
TGTCCATAAGCTTTCAACGAAAAATCCTAAAATGTCTAGAGACCATTTTC
GAAGAACCTTTTTCATGGCATTTGGTTTTAACAACAACATGAAAATGTAT
TTTCATTGAAAGTGCTTCATCTGTCGTACAGTAATGGTTACTGGCTTGTT
TTGAAAGGCTTTAAACGGAGGCTTTTAATACCAATATTGACTGTTAAACG
TAATTTTTCCATATCACATTCATTACAGAAAAATGTTGGAGCTGGTAGGC
TTTATTACAGTGTTTGCTTTGGTGCTATTTTGGGCTGTCCCTATCACTTT
CATATCAACCTTGACCAAATTGGAGTCTTTATCTAAAGAATTCAAATGGC
TTGACTCAAGTAAGTGTCATACTTGTTCCGTTCAATAGAAAATCAATGAT
CTGTAATGGTTGATATTCTGTTTATCAAAACTATACCACACTGTCCCAAA
AATAGCAATACAAACAATTCTGAAGAATACTTGTATTTACCATTTAAATA
ATCCTTGCTATCCATTCAGCCTATCATATGTATAAAAATGTACTAAagta
atttcattgttttcttgttttttagtACTGGCGGGATCATCCAAGATGTT
CATCAGTTTTTTACAAGGCGTATTACCAGTCATTCTCATCGCCGTCTTTT
ATCTTATTCTTCCTTATGTATGTATCAgaaaacaaacctttttgaTTTAC
GATTGAATGTATTACGGTCAGGCACATCCCCGCTGCCATAATATACTTGT
AGGTTACTATATGCCGGACTATATACAAAGTTTACCTAACGTTGCTTGGT
GAAGTGGCATACCAACAACTGAAAATTAGAATATGCCTTGATCTCGGGAC
TGATGTTTAGTATGGGTCTGGTTTCTGAAAATCATCTTGTCTTATCATCT
CATCTTGTTTTTTAGTAATTTACTAGTCTCAATTTCAAGactttcttttt
tcataaaaagaaaaCAGTATTAATTGAAAAGGAGAAGGACTTTTCAAGCT
TGGAATTATAATCTAAGGTCCCGATTAGTAGGAGGAAGGGGGTCCCAGGG
GGTCCGAATAAAAGGGgaggttggaaattgtaccGGAAATATTTCGAAAG
TTAATAAATGAGACGTTTATTCAGTACCTTAAGAGTTGTTAATTCGTGGT
CTAGCTCTAAAATAATAGTGTCCTATTaaagcttttttcttttcacaatT
TCTAGATTTTGTTCTTCATCGCAACTATTCAAGGATTATTCTCAAACAGC
CGTTGTGCTGAAATGGTGTTCAAATGTTTATTTGTATTCCAGGTATAGAG
ATATTATATTTAATCACatgctttttttaaacaaattggATTTTACTTTG
AGATTTCGTGAGCATACCTTAAGTGGATCATATACGCGAGGGTTATATTA
AAATTATAGATTATATAAAACCGTAGGTTATTTACCAAAacctctaggaa
aatgaaagaaattagttaaaaaataaaatcacgcGAGAATTGAGTTATTT
TTCAATCGCAAAAACATctactcgcgaaagtttatccacTAAAGATATTT
GTAAAATTGAACAGTAGTATTGTCTCTTGCTTCGTCACTGTGTATGCTCT
GTTTACCTCGAGCCGGTGACGAACCTTTAGTATTTGTACGATCTGTTTGT
GGCCCCTAAGATGAGACCAaataaatttattgttctacgggcccgaccga
ccctggtTCACCCAAATTTGAAAAgctaataatattgaatttgcaaAGCT
GGAGGATGGGCTTTTGATTTTTCGCAAATATGTTTAAATGAACTTAAAAT
AGCCCAATGGAAATGACACGAAAATCGCACGTTAAAAGTTTTCTGcttca
aaatgtcacaaattttttagacttttaccttccgaccctagattttagga
aatttatttttataataccGACCtaccaatatttttctgaagctCTTTCC
atggaacaaaaaaaaattgtttcgcCTAATAGATAAAAAATAACTTCTTA
TAATATCTCTTGtaaaatctattttaactttttaatgaATCTAATTTTCC
GTTTTTAGACGTTCAATACTTTCTTCATCTACATCTTATCCGGATCTGTT
CTCCAAAACCTCTCGCAAATCGTTCAAGAACCTTTCAAAATACCTAGCTT
GCTAGCTAAATCGCTGCCCAGTCAATCAGGATTTTACGTCAACTACTTGG
CTATAACCTCGTTTGTTGGGTTAGCCATAGAACTCACACGTATATGGCCG
TTGATTCGCATTTCGGTCACCTTGAAATGGTAAGAAAGGGTATTTTAAAA
CTTACTTAAGCTTACCGGAAAGGTCTAGCCAATACAGATATAACACGGTT
GTATCATGAAGGTAGAGTATCCAGCAACAGTACgcagggttgtgggttcg
atccccagctgAGTCATACCAAATATTCCCTAAATGGTACTTGCAAACCT
ACTACTAACCAATGCAGAGCAACTTTAATGGATTGAAATATTATGCTTAT
TGAAAACTCAGCCGTTTGAAACTACAATAAACTTTCTTATTCGAgcttct
attattcaaatctttctataattcgaacttattctcaGTTTCCATCAGTG
AGAAACCTCTCTTACAATACTCTCTATAATTAaaatctctctataattcg
aacaaataggATTCCCCGTTTCAGTTCGACTCGCGTTTATtggaacttct
attattcgaatctttctataattcgaacttattctcaGTTTCCGTCAGGG
AGAAACCCCTCTTACAATACTTTCTACAATTAaaatctctctataattcg
aacaaataggATTCCCCGTTCGCGCGAGTCCACTGTACCTTAACGAAAAT
CCTATCAGTAAACCCTCTTTctacaatttcatttcatatccATAGTACTT
GGTGCATATCACAAGAGATGGGAAAGCATTGTGTTAAATAGTTAcacaat
tttatgatttttcttgTTCTGTTTAAGGTTTGCAAAAACGTCACGCCAAA
AGCTGGAAGCCTGGAAACCGAAGCGTGCTGAATATGAAGTCATGGTATGC
TGTACATCAAGTAGATTaaattattttctcaaattttgtttcttttcgcg
aaatttaatccacgcgaaaattttacATTCTCAATTCGCGAGAAAAAGTC
TGCGCGAAAATTACTCCTAAGATAGAAATGTTAAATTCTTAACATGGTTC
TGcaaattatataaaatattgatgcAATTTTCTGACAACTAAAGTCCCTA
AATCGTCATTTGAAATgtattattttctcttttatttacATTAAGTATTC
ACAAGCATTGTTGTTCTTCTTAATCGGGCTCTCCTTCTCGGTGCTCTCAC
CCATCATCGTGCCCTTCGTCGTCTTGTATTTCGCCTTCGCATACGTCGTA
TGGATGTATCAACTGTTACACGTCTATATTCCTGACTATGATCACGGTGG
CCGGTTCTGGACTTTCGTTTTTAATAGGTGAGTATACAATCGCTTTCTTA
TTGGACTATCCTTTTTCTTGTGATTATTATCGGGGTTTGGTTTCATTTAT
TGTTGATCTGACTGTATATGTATCTTAATTTTGTAGTAGTTTAATGAGAT
GAAAGAGTATTAAGATTTTCCCCATCGAAATTTATCCTGAAGTATTTTTT
TCACCAAAAGAGATTTTCCTTCTTTACTtcatagaatgatggtatgcgTT
TTGGTCTTTCAATTATTAATGGTGGGCGTGTTCTTGCTCAAGGAGGTTTG
GTTTGCCGCTGTCTTTTTAGCGCCGCTCATCATTGTTACGGTGGCATTCT
GGCTTTACATTAACGAAACATATCTCCCGTACAGTCGCTACTTGACCGTC
GAAGAAACAATCGGCTTGAAAGGGGCAGAACAACGATTTCTAGAGGTAAG
GATTCTCTGGATGGGATGtagggccgtccacatagtacgtacgcactaaa
atgtcgaaaatcgagtaccccctcccccctgtacgcaagcgtacgcaaat
ggctatatcCCCTCTgttaagtacgtactttttcattcaccccccccccc
cccctgtacgcaagcgtacgcaaatggctatatcccctctggtaagtacg
tagtttttcattcaccccccccccccccctgtacgcaagcgtgcgcaaat
ggctataccccctctGGTAAGGGCGTGTTTTttccttccccccccccccc
ctcggttgaagaaaatttagaattcaaatcgtttggttcggacctttatt
ccatacatgaaactcaatgtttatcaagaaactttttcttttccttaatG
CGTATAAcaagcgtaaaagtcgacaaaaaaacaaaaagggctatgaaaaa
attttctctgcgcacgtacattttcctttgacccctccactccccctgta
cgcaagcatacgcttttgagaagaccccccctcccccgttagtgcgtacg
tactatgtggacggccccataGGGTGAATTCGGCCAAGTAAGAACGGACT
TTCATAATACCACGATACAAAGTATTTGTAACCTTGTTAGCGATTAAAAC
TGAGACGAGGTTTAAGAAGCTGTTCTCGTCATGGAGAAACCtcgtaaaat
actttctataatacTGTGGTTAAGTCCCTTGAGCTTTTATGTGTTGCTTT
TATGAAAAGAGTCAACTGCTTATGTGAACTCCTCTGAGttttagcaatat
tttgaaaacgatctaAGCGTTGCTCGTGACTTAATTTATGAAAACAGTCT
ATTAGAATCTAACATTTCTGTggttcgaacaaataagattccccgatGAA
TGAAAACAAATTGTTCTGGGGACCGGGTAATTTCTTACTTCTTCTTACTC
CTTAGACCGTCACGCAAagtcttttttttgatttttttaaactttcatca
TTATAGGAGGTGAAGAATCGATACATCCTCGATCAAACCGTTCCCGAAGT
ATTCGAGTTGAGTACAGACAAACAACCATCGAGTGAAGATTATATTCCAA
TCGATTCAATCAATAATCCGGATACTGACGAAGAAAATCCACAAGACATG
AAAGAGAGCACGCGACTGCTTGGTATCTGACGATTAGGTCTGGATTTATT
GGTTAATCATTTTTGGAAGATGTTTGAAATTGAATGGCTAGTCAAGTTAG
TACTGGACTTAAAAGATAACCGTACAGATTTCCGGGTAATTAATCTGATG
TTCGTTACTGGTGAATTTTCTGCGAGTTTAGTATGTAACTTTCGCGTCGA
AATTTCTGGATGTTAATTaatgttgttttgttacttCTCAACCCTGTTTA
ATGAGATTTAATGTCTAATTTGACATTACCCATTTTCAACTGGCAAATTC
GTGGAGAATTTGAAGGCGATGAACTTAAGTCCTAGTGTAGTCTCTTCACG
TCctacaaaattatttttgttagtattttccAAAGGCGTTCACCTTTGAA
TTCGTGTAGCTCTATTGTGATCTTGTGGGGTAGCACGATTTTTCATATTA
TTCATATGTTTTTTAAcggttttattttctttttttcaatattgtaCATA
GTAATGAAGAACATTATATATTGTaatttttcctgaattttctaGATGTA
TTATATTATGAAGCTTTCTAACAGCAAATTGAGAATAGGTTTGTCACAAC
AGAAGTTGTCACTCAAAAAGATTGGAgctgaaaatgagtaaaattttcaa
agattaatGATTTTATACATACATGACGATGATGTCATTATTAATTCAAA
gagttttcataatttttaaattcgAATAGTCAATATcatgtgtcaaaatt
tgaacatAATTAGATAATTAGTTCAccaataaattttgagttttaaacga
tTTCAGCCCCGGGTTTATGTTATGTTTCACAATAAACCCATCTGGACAAC
CTATATGACACttctaataaaattttattaaaagccAAGAANctctagtt
tttccgacccttacagtgcatttgaggtgccttgaaaaagacacccttag
tgcccgcacatacccgtcggtccttttgcccagctgccccccccgggatt
aAAAGCCAAGAAGTTTCAAATCGTTTTGGGCGTGGTGGTAGGCTCTACAC
CCTAGGCTAGGGCAAAAAGAGTTTTGAATTTGTTCCTTGTCTTTTTAACA
TGAGATATTCTATAATGCAAACTATATTTTTAACATGATATTTATCTTTC
GTTCTGTATCTAAATAGTTTTTTAGAGGGTAAACATTCATTGTGTAATTC
TGCAAACATTCGTGATGATGTGGAAACTTCTGACGGTCTTCCATAAAACA
AATTGGGAAAAACTTCGGGGGTTTTACTGACTTATTATAGAGCAAAACTT
TGATCCGTtgggaatagaccttttcataaattacgtcacgagcaacgctt
acctcgctttcaaaatattgctattgtGATTGAATCCCAGAGGAGCTCAT
AACAAGTCTTCTCTTTTTGAAAAGTAGCACTTTAAGCCCCAAGGAAcata
atcaccttggtaataatttcaaaacgaggcagtggTTGCACTCGAAATAA
TTTATGAAAGGTCTATAAGTAGTccgaaaacgaggcaagtgttgtttatg
acgtaattttgtATAATATGGAAAGACCTCTTCATCACAGgacaaaaaat
tataataaaccACGTTCTTAGAGTGTCAATTTTAAACCATATCGTGTTTT
GTAGGGACATTGttgtatttttctatttttttcctaAATAAGAATTTCAG
ATATCATTTTCATCGGTAATAATTTCAATACAGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030074XLOC_030074Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047211-exon-scaffold_123-1491911889:353019..353673TCONS_00047211-exon-scaffold_123-1491911889:353019..353673Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1510915933:353019..353673TCONS_00047211-exon-scaffold_123-1510915933:353019..353673Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1575043694:353019..353673TCONS_00047211-exon-scaffold_123-1575043694:353019..353673Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1491911889:354076..354129TCONS_00047211-exon-scaffold_123-1491911889:354076..354129Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1510915933:354076..354129TCONS_00047211-exon-scaffold_123-1510915933:354076..354129Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1575043694:354076..354129TCONS_00047211-exon-scaffold_123-1575043694:354076..354129Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1491911889:354329..354421TCONS_00047211-exon-scaffold_123-1491911889:354329..354421Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1510915933:354329..354421TCONS_00047211-exon-scaffold_123-1510915933:354329..354421Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1575043694:354329..354421TCONS_00047211-exon-scaffold_123-1575043694:354329..354421Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1491911889:354610..354705TCONS_00047211-exon-scaffold_123-1491911889:354610..354705Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1510915933:354610..354705TCONS_00047211-exon-scaffold_123-1510915933:354610..354705Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1575043694:354610..354705TCONS_00047211-exon-scaffold_123-1575043694:354610..354705Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1491911889:354971..355176TCONS_00047211-exon-scaffold_123-1491911889:354971..355176Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1510915933:354971..355176TCONS_00047211-exon-scaffold_123-1510915933:354971..355176Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1575043694:354971..355176TCONS_00047211-exon-scaffold_123-1575043694:354971..355176Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1491911889:355497..355627TCONS_00047211-exon-scaffold_123-1491911889:355497..355627Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1510915933:355497..355627TCONS_00047211-exon-scaffold_123-1510915933:355497..355627Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1575043694:355497..355627TCONS_00047211-exon-scaffold_123-1575043694:355497..355627Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1491911889:355844..355935TCONS_00047211-exon-scaffold_123-1491911889:355844..355935Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1510915933:355844..355935TCONS_00047211-exon-scaffold_123-1510915933:355844..355935Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1575043694:355844..355935TCONS_00047211-exon-scaffold_123-1575043694:355844..355935Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1491911889:356474..356560TCONS_00047211-exon-scaffold_123-1491911889:356474..356560Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1510915933:356474..356560TCONS_00047211-exon-scaffold_123-1510915933:356474..356560Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1575043694:356474..356560TCONS_00047211-exon-scaffold_123-1575043694:356474..356560Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1491911889:357327..357547TCONS_00047211-exon-scaffold_123-1491911889:357327..357547Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1510915933:357327..357547TCONS_00047211-exon-scaffold_123-1510915933:357327..357547Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1575043694:357327..357547TCONS_00047211-exon-scaffold_123-1575043694:357327..357547Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1491911889:358246..358328TCONS_00047211-exon-scaffold_123-1491911889:358246..358328Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1510915933:358246..358328TCONS_00047211-exon-scaffold_123-1510915933:358246..358328Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1575043694:358246..358328TCONS_00047211-exon-scaffold_123-1575043694:358246..358328Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1491911889:358564..358745TCONS_00047211-exon-scaffold_123-1491911889:358564..358745Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1510915933:358564..358745TCONS_00047211-exon-scaffold_123-1510915933:358564..358745Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1575043694:358564..358745TCONS_00047211-exon-scaffold_123-1575043694:358564..358745Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1491911889:358953..359163TCONS_00047211-exon-scaffold_123-1491911889:358953..359163Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1510915933:358953..359163TCONS_00047211-exon-scaffold_123-1510915933:358953..359163Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1575043694:358953..359163TCONS_00047211-exon-scaffold_123-1575043694:358953..359163Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1491911889:360175..362054TCONS_00047211-exon-scaffold_123-1491911889:360175..362054Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1510915933:360175..362054TCONS_00047211-exon-scaffold_123-1510915933:360175..362054Clytia hemisphaericaexon
TCONS_00047211-exon-scaffold_123-1575043694:360175..362054TCONS_00047211-exon-scaffold_123-1575043694:360175..362054Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_123supercontigscaffold_123:353019..362054 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.07184e-09	0	0.000364957	0	0	3.19642e-10	0	0	0.00132461	0.0243742	0	0.00187292	3.06572e-05	3.56508e-07	0	1.23435e-05	0	0.00516088	0	0	0	8.90829e-09	0	8.06845e-10	0	0	4.17476e-05	0.000150655	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047211 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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