TCONS_00047253 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047253
Unique NameTCONS_00047253
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3099

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047253 ID=TCONS_00047253|Name=TCONS_00047253|organism=Clytia hemisphaerica|type=transcript|length=3099bp
TTCTTATTGTTGCTGAAATTGTCGACTTAACTGGGATGAAGATGCTGCTC
AAAAATGGCCATGGATATCTCACATTCAGGATAATGGTGATTTGATCTAT
GTACACACTCACCATCAACACAAACATTCACACCCTCGTAATCACAACCA
TAACCACTCAAATTCAAATCATCATAAACCAAGaaccaaaagttttcttc
aTAAAGATAACAAAGAGAAAGGTTTacaaggaaaattgaaaaatgttata
AAGAAATCGAGATCTTTTACAAAGAAAGATGTGATAGATAAGAATATAGA
CATCAGCCATTTTAAAAactcagaaaaaaagaaacagcAAAACCCTTTAA
CTGATACCACTACTGAAATACAAACAATCACTACAGATGGAGTTCATTTA
TTGTGTAAAAACGTTTTGATACACCTAAATGATAAAGTGCAGGAAAGTTT
TGCTAATCTTGAAAATGTGATTGGAGTAATATCAGGGTTAGACCTTGATC
CAGTTTTGGATGATTTCTCAGACAATATTTTAATGAATGGCAATAGTACA
AGATATAATTCGAATTGCATTGTGGTTCAAGGCATTATACCAAACAGTCC
GGCCGGAGAAAGTGAAATTAACATAGggGACATTATATTAGCGATAAATG
GTATCAAGGTCAATCTTCAAAGTGTCAATTCAATTGTTGAAAAGATTAAC
GGCACTCAAGAGATTGTGTTGACCATCGAGAGGTTAGCCACGGTTGTGGA
ACCGGAAAAACCAAGTGAATTATGTTCCATCGTTTCGAACACATTGGATG
AAGGTGCAAAAGAAGATGTATTCCATGCATACCATGACACATGTATGGTT
TCTCTGTTGACATTAAACTCAAATGAAGATGATGTGGATGGTGACATTTT
GTTTTGGTACCCAGACAGTGAGAAATCAAAGATTCTTCGAAATACACGTG
GTATATTCTTAACATTGAGCGACATGCTGACTGATGTAATGGCTGAACAT
ATACAAAGCTCTGTGCTATACACCAATAAGGAAACAATAAACGTTGCTTA
CAAAAAGTGTGGTGGAAACGTTTTAGTTGTCGCAGCACCAGATCACAAGT
GTGATTTGAATACACTGATATCATGCACTGATGACTTTGCAAAACTCTTG
ACTATTTTGAACGGAGACCTGAATAGagCATTTACAGATGAGAATATGGA
ATCAACAAGACATGAAACCTCACTATTCCttgatcttcttcttcaaaGAA
AACCAGTGGTACCTTTTGGTACAGTTCGACAACTGCAATTACCAACTAAA
CAAATGATCGAGATCAGCAATGTTGTTTCGGATGTGGAGGCAGCTGATTA
CGGAGAATGTGTCGATGATTTCTTCCCTCACCAACGATTATATGGCACAA
TCGGAACCTGCTTGTTTTATAAGgaTAATCTTGTTTGCTCACATTTGACG
GATGAGAATTTACAAGACGTCGTCACCTTTTGTAAATATCATTGGCTTTT
CATGTTGGCCAAGTCAGAGAAAATGAAACAACTTGTGTTATGGAAAGAGA
TATTCTTGACAGAGAAAAGTGGAGAGAGCCCGGCTACGAAGAACAGTTAC
GAAACTCCCGAGAATGCAAGATGGTTCATTTTGGTCGTCGGCCAGGGACA
TAGTTTGTTTTGCACTCTTCTTGAGACTGGTGGTGCTGCTTCCATACCTG
AAGGAAACCCTGGTCCTCATCCTTACTATGTAGACACAGCATGGTCCATC
TTGACGTATCTGATTGAAAATATGGATTACGAGACATCTTCACATTCAAG
ATTGGAAGGTCCGTCCATACCAGCAGTAGTTCATGCTACAGAAGCTATCA
ATCCTAAAACGTCAGCCAGCCCACGTGCTATCGAActgatcaaaagaaaa
gtacCTATCCAGAGACGTCCGCACCATGATCATCTCTCGATTTCACATTC
TATAAGTAATGAAAGTGATCTTGGTATGCGAGAACGTTCACAATCGAGGA
CGTCGAATTTATCAGGGAACAGCAGTAACCGTCATTACTCTGTCCATGAA
ATGGCTCCACATTTCAAACAACTCAGTATGGCTTCCACATCTGAGGTGTC
AACAACTGCTGCACTCGCCACCAAGTTGCCGACCGGTTCACATAACACTT
TATTTTACTTCACCGTCTTATCCAATCGAAACGGTGTGTTTGTCTCTCCC
AACGCATTCAAAAGCTCAAATATGTTGACTGGTGAAATTCTGACCAATTA
CACTTCTGCGTGTGAAAAGATTCATAAATGGTTTGAAAAGAAACAGTTGC
TGCCATCGGAACCCTTGGAACTTGGTGTTCTCTTTCATCTTCAATTAACG
AAAGGTGCCGAGATGAAAAAAGGATTTCCCAATATTCGATATTGGGTCGT
AGGACGTAAGATGAAGAAACGAAACAAATGTGAAGAAGTTTACGTGTGTT
TTCAAGATGGTACTCCTCAAAATGTCATCGAAATGGCTTTCAAAATACGA
TTTGGATGCCATTATTGAGTCAAATATGTCTTGGTTGAAATTCTCTCGAG
TCTTCAGTTCTTCGCTTACTGAATCCGCCATTCAAGATTAGGaaaatttt
aatggtttttgttaaaaatgaaaatatattttcttggTGTGTTATGTCTT
GTAATATAAGTTTGTGACTATAATTTTGTGATACTGTGTAAATATGTTTT
TGAATACTGcaaactattttttgaaaaattttgggctttttaaattgaag
aaattttaacatcatatttttttaattatttttaagtCGTGAATGAATTG
TAAATATTAACTAAATTTTGGGTTGGGTCGGGTGTTGCCTGATGTTGTAT
GGCCCCcacgaaattttgattttgtcgTTGGTACAAAAAACTTTGATTCA
GAGACTCTTTTGATGAAGTTATTATAACTTGAAGTAAATTTTTAGAATTC
CGAGTTTCGTCTAAAGGCCGAATGACCCGTTGATAAATCGATTgtataga
ttttattttatatcttaGTTATTTATGCTTTTAGTTTTCTTTTGGATATA
AAACGAAATCATCATTGTATATAGCTGACCAAAAGCATGGTAAATcaac
Run BLAST on NCBI

transcript from alignment at scaffold_123:499375..511822-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047253 ID=TCONS_00047253|Name=TCONS_00047253|organism=Clytia hemisphaerica|type=transcript|length=12448bp|location=Sequence derived from alignment at scaffold_123:499375..511822- (Clytia hemisphaerica)
TTCTTATTGTTGCTGAAATTGTCGACTTAACTGGTATATATAGTTACGTC
TGCATTGTGTTAAAAGTTCTCTTTTGCATTGCCAGCACATACAAAACTCA
CAGTAGTGACTAATTAACCCAAAAGCATGTTTAAGCATTTCAAATATTGA
TTCCATTTAACTTTTTTATGTTCAGGGATGAAGATGCTGCTCAAAAATGG
CCATGGATATCTCACATTCAGGATAATGGTGATTTGATCTATGTACACAC
TCACCATCAACACAAACATTCACACCCTCGTAATCACAACCATAACCACT
CAAATTCAAATCATCATAAACCAAGAACCAAAAGTTTTCTTCATAAAGAT
AACAAAGAGAAAGGTTTACAAGGAAAATTGAAAAATGTTATAAAGAAATC
GAGATCTTTTACAAAGAAAGATGTGATAGATAAGAATATAGACATCAGCC
ATTTTAAAAACTCAGAAAAAAAGAAACAGCAAAACCCTTTAACTGATACC
ACTACTGAAATACAAACAATCACTACAGATGGAGTTCATTTATTGTGTAA
AAACGTTTTGATACACCTAAATGATAAAGTGCAGGAAAGTTTTGCTAATC
TTGAAAATGTGATTGGAGTAATATCAGGGTTAGACCTTGATCCAGTTTTG
GATGATTTCTCAGACAATATTTTAATGAATGGCAATAGTACAAGATATAA
TTCGAATTGCATTGTGGTTCAAGGCATTATACCAAACAGTCCGGCCGGAG
AAAGTGAAATTAACATAGGTAACAGCAATTGGAATGATTTGTTTATCTTA
GCTGTCATTTTGTTTATTTTATACCACAATTAACAACCCCGTTTTGAGTG
AACTGTTTATGCTAGATAGCCCTCAATCACATTAAAAGTACCTCCAGGAA
TAGTAACTGTGCCACTTATAAGGAAACTTGTATTTTTTTCAAGAGGCTAC
AGTGATTTTTTTAAGGCTCTACCTAGATTACCATCCTGTTAGTTCTCTTA
TTATAAGAAAAATTTGCACCACAGTTAATGAAAAAAAGTTCTTGGTTCTT
TTAAAGTGTTTTGTTTTTGGCCAAGTTATGTTTACATTTTTTTTTTTTAC
AGGGGACATTATATTAGCGATAAATGGTATCAAGGTCAATCTTCAAAGTG
TCAATTCAATTGTTGAAAAGATTAACGGCACTCAAGAGGTTTGTATACTA
ATAAGAAAAATTGCTCCATAGTTTTTAAATGAAAATATGGTAAGAATTGA
ACTTAAAGGAATAACAGTAAACAAAATCATTTCAATACACTACTAANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAAAAAGAAACAGCAAAACC
CTTTAACTGATACCACTACTGAAATACAAACAATCACTACAGATGGAGTT
CATTTATTGTGTAAAAACGTTTTGATACACCTAAATGATAAAGTGCAGGA
AAGTTTTGCTAATCTTGAAAATGTGATTGGAGTAATATCAGGGTTAGACC
TTGATCCAGTTTTGGATGATTTCTCAGACAATATTTTAATGAATGGCAAT
AGTACAAGATATAATTCGAATTGCATTGTGGTTCAAGGCATTATACCAAA
CAGTCCGGCCGGAGAAAGTGAAATTAACATAGGTAACAGCAATTGGAATG
ATTTGTTTATCTTAGCTGTCATTTTGTTTATTTTATACCACAATTAACAA
CCCCGTTTTGAGTGAACTGTTTATGCTAGATAGCCCTCAATCACATTAAA
AGTACCTCCAGGAATAGTAACTGTGCCACTTATAAGGAAACTTGTATTTT
TTTCAAGAGGCTACAGTGATTTTTTTAAGGCTCTACCTAGATTACCATCC
TGTTAGTTCTCTTATTATAAGAAAAATTTGCACCACAGTTAATGAAAAAA
AGTTCTTGGTTCTTTTAAAGTGTTTTGTTTTTGGCCAAAGTTATGTTTAC
ATTTTCTTTTCTTTTTACAGGGGACATTATATTGGCGATAAATGGTATCA
AGGTCAATCTTCAAAGTGTCAATTCAATTGTTGAAAAGATTAACGGCACT
CAAGAGGTTTGTACTAATAAGAAAAATTGCTCCATAGTTTTTAAATGAAA
ATATGGTAAGAATTGAACTTAAAGGAATAACAGTAAACAAAATCATTTCC
ATACACTACTAATGGGTTATAATTAGAATGTAGTTGATTTATTTCGATAC
CAATACTACTTTTTAAGTTTTGCCACTGATTTTGCCACTGATTTCAATTT
ATATCCATTCTAATATTTTCATGAATTATTTTAGATTGTGTTGACCATCG
AGAGGTTAGCCACGGTTGTGGAACCGGAAAAACCAAGTGAATTATGTTCC
ATCGTTTCGAACACATTGGATGAAGGTGCAAAAGAAGATGTATTCCATGC
ATACCATGACACATGTATGGTTTCTCTGTTGACATTAAACTCAAATGAAG
ATGATGTGGATGGTGTAAGCTAAAACTTTACTATATTATTGTTCCTAATC
TTTGCATAATAGATATAACTAAAAGCCTTTTTGACCCTTATTTATCAATA
ACTCAACTACGATGGCATTGTACCGTGTATCAGTTTTCTATTAGAATATA
ACACCCCTGGGTACATGGGTCACACTGCTTTCTTGTATGTCCAGTCTGTC
TAATCCAATCATAGCGTGATGCCTTAATTGTGGCCCTAAAAGATTTGAAC
TATACCATTTTAACAAAATCAAGGTAGCATTACCATTCTTCAATCACCAT
GCATTAAAAGCTTATTTATCAGAGTTTTGCTTCGTTTTTTTAGGACATTT
TGTTTTGGTACCCAGACAGTGAGAAATCAAAGATTCTTCGAAATACACGT
GGTATATTCTTAACATTGAGCGACATGCTGACTGATGTAATGGCTGAACA
TATACAAAGGTAAGAAACTGTTCGACTAACGTTTCCAGATCAGCTAAGAA
AAGAACAACAAATAACTTTTAAAGAACGACAAAAAGAACGTCAAATGATA
AAAAGTTAACGATAAAGAACGACATATTTTGTCATCCCATCCCCCAGCCT
TATTTAACGACTAGTGGTTTAAAGAATGATGAATTACACATGTGTCTGTT
TTGATTTAAAGACTTTCCTTCCTCGTTTTCTTTAGCTCTGTGCTATACAC
CAATAAGGAAACAATAAACGTTGCTTACAAAAAGTGTGGTGGAAACGTTT
TAGTTGTCGCAGCACCAGATCACAAGTAAGCTTTTTTCTTTGTAGTAATA
GTGTCAATGGAAAATTTCAAAGTACTCAATTAGAGTTGAAAAAACAGTAT
TCTCAACTTCAGTTGAGCTACAATCTGACAATGTCTGTCTGTCTGTCTGT
CTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTTACAAA
AACTTTAGGGCAGCCTGGAGACTTCAAAAATGCTTGGATTTGGCTGAAAT
TTGGCACACTTGTTCCTCCTTGGGTGAATATCTGGGGGTGTTTTTTTCAT
TTTTTGAAAATTATGATTTTTGAGGCATGGGAACGAGTTTTTCGCCAAAA
CGAGGCTAAAAGTTTGGGGAAACCTCGAGACTTCAAAAATTGTTGGATTT
GGCTGAAATTTGGTACACTTGTACCTTGGGTTAATATTCTGAGGGTAATT
TTTTCATTTTTCAAAAATTTTCATTTTTGGGGCCTGGGGACGAGTTTTTT
GCAAAAACGAGGCTAAAACTTTGGAGCAGCGTACAGGCCTCCAAAATTGT
CGGATTTGGCTGAAATTTGGCACACTTGTTCATTGGGTGAATATCTGGGG
ATCTACAATTGGGCCTATGAATAATTTGAAGCCACTGAAGTTGAGCCCAG
TGCGTTGCGCACGTTCGACTATTTTTAACAGAGTGATTGCAGAAAGCATA
TTCTTTGAAAAAATATTCTGTTAAATATACAATTTCCTTCTTTCAGGTGT
GATTTGAATACACTGATATCATGCACTGATGACTTTGCAAAACTCTTGAC
TATTTTGAACGGAGACCTGAATAGGTAATACCACTAAATAGTAGCTAATA
TAGTATTTTTCCCCAATTTTCCTTTTGTCTTATACTCATTATTATAAGAA
TAGTTTAAAGAAACACTAAGTTAATGCGCCTTAGACTAGTAAACTAGTCG
GTTATTACTTATAATAAAACTGTCAATCAAATAATGTAAACACTACTTAA
ATATTCAGCACGCGTGAGAGAAAAGGAAAATAACCGACTAGAAGCTTCTT
CCAACGCCTTTTTTTCTTCACCTAAAATCGTAAGGAGAGACATATACAGA
TTTCTGTATGTCTGACCCGTGCGGGATTGCATTTATTTTTCTTTCTGTTT
ATTGCATTTTTGGGAATGCTCATTTATTTATATGTTCCCATGTTTAATGT
TACTATGAAATGTCATTTAGTCAAAAAAGTTGGATGGATTCTCAAAAACC
TAAAAAAGGTTGTAAAATTAAACAACTTTTTTTTTTTGAGGGAAGAAGCT
TCTAGTCGTTGAAATTCAGAAAAGACACGCAACCTCACCTCTTCGATTCT
TTTTATTTGGAGCTTGAATTTTTTGTATATGGGTCTGTTTTCAACGACCA
GTTTACTAGTCTAATGCGCCTTAGTCTATTACATTCATCTTTAACAATAA
GAAGTGGTTATTATCAAGAAAATGTAACCTTACAATCAAGGTCATAATAT
TTGAGAAAAAAGGGAAATCCACCGGGAAGTTTTTGAACCACAATCGATTT
GTAATTACTCTAAAGTAGGTTGGAAGGGTAGAGTTTTAACTCTGAGTTTT
AACATGAGACTTAAGACTTGACTTAAGACTTGACTTAAGACTTAAGATCT
GAGGATCCAAAAGTTCAAAAATAGTCCAATAAGACTCAGAATATAGCCTG
GAAGTCTGCCAACCCCTCCCAAATTGAAATATTCGATTAAATTAAAAAGA
TAGCCAAAAATCGTCTTTCTCGCCAGAACTTTAAATCTTGAAAAACGTTA
AAATAACCAAAATTCTCAATATATTAGTATATGTAATCACATGATAACGA
GTGCAATTCGAATATAATTGCACGAGTGATTTTTTTGTTATTAATTTCGT
CCGAAAGGACGAGGAAAATTCGAAACAAAAAAATCACTAGTGCAATTTTC
GAATTGTACGAGTTATTATGTGATTATGAGCTAATCGCACAATGGATTTC
ATTACTTTTTCCCAGTTAGGAAAGTAAATTACAGAAATTACACTGAGAGT
TTTATATTTTTCTCTTCTCTTTATGTCTTTCTTTTATTGTTGTTTATTGA
TTTTCTTTCTCACAAAATAAATTTCGAATGCAATTTAAACGTTCGATGCT
GTTAGCTCTGCTAGCGGATATCAACACACATTGAGCATCATTATGCGCAA
GATTGTGGATATAGCTATCAGCTCCATGAAGGAATGAGTAGTATATAGGA
GCTCATAGAATAAAGACAGAAGAAAACCGTTCACACAAATTCTTAGATTT
ATCGCACCCCCAGAACAACACTTTGTTAGCTCACAAGGCTAACAAATGGA
GGTTCTACCGAGATCTTAAAGGATTTGGTATTTGCTGTGTTGTTCTGGGG
ATTCGAGATTTAGCTTGAGAGCTATAAAGATAAACAAAACAGTGAAACAT
TTGCATGGAATATTTGAGATGTTTTATGATTGAAATAGTCAAATTATACA
TCGAGTTGATATGGCTATTCGAAGTTTCTTGGCATTGGTTCATTGACATT
GTTTATGTTATTGATATGATTTATTGAAGTCGTAACGTCCAGAACATGAC
GCTAAACTGATCCCGGGCTCCCTTGAGCAAGGTCAGTACCCGGAAGCTTC
CCATGTCAGGGTTACGATGAAGAAATTGTATTGTTATACACGTCCTGAAT
CCTGAAAGTATGTCTTTAAACTTGTCCTGAGAGATACACAAGAACATTAT
TGAATAACTATGGTTAAAAATGTCCTGAGAGACATAATTTGATGGTCAAA
GATATCTGAAGTGAAGAAAGGCATGGTTTTACTGAGAAAACAGAATAACA
TAACGAAACATTATGAAGAAGCTGCCCATGGTTACATCGCAGTAAAAACG
ATTGCATCGACATAGGAATGCTAAGTTAATCCATGGTTGTAAGACGCAAC
GCAGTAATAGTTTTCCGAGATAGTTATGCGTTATCAGATTCCTAAGAAGT
AAGGTGAAACATGCATTTAATTCAACAAAAGACATTTAACCTATGGTCAG
GAAACCATAGCATCGAAATTTGATGTGATGCTGTTCTAAAAATCGGGGAA
AATCAAAAAGGGCATGATAAAGAAATTCTTATATCGTCAAAAGAACGTGA
AAGAAACAGTATCTACCATCTATGCAGCAAAGGAGTTAAATGGCATATTA
TAAATCATCAACAAACAGAAGAAATAAGCCAAAACAAAGCAACAAGCAAT
GCAGCATATGAGCCAAACAAGCAATAAACAAATGAAATTACCACAATATA
CCCAAGATGGGGTAAACACAAGCTATGAGAAAAAACCTCAACAAAGGTTA
AAAAACAAAGCAATTGTTTTTAAACAAACAGACATTTTCAAATCGACCAT
TCAATCATACAGAAGTTATGTATAGTAAAATAGTGATTAGAAGAATCTTC
TGACAAAGATGACGAAGATGAAGAATACTTGAGTCGCCAAACATGAGATA
CTGTGTATTAGATAATATTGCCATGGACAATAAAAGATAGAAAATTAACC
AAGAAACTAGCTACCCTCCATCGCATTGAAAATTGATGCCCATTCTATCC
GAAGATCAAGTGTTTCTGACACTGATGATTTAATTAACAATTTGAATTAT
TGAAACATTATCAATGGTAAAAAGACGTATAATACATTAAAAAGAAAACA
CAGAAAACAAAATTGTAGTATTTTATTATTTGATTAAAAGTGCATATTTT
ATTTCTAGGAAACATTGAACCATTAGGGAACCAGTAAAAAAAAAAAATTA
TTTAATATTTATTTTAGAGAATTTTATTAGGAGTAAATGTGGAACATTTT
TTTTTTCCAACGGGGTTGTTAGCTCTGCTAGCGGATATCAACACACATTG
AGCATCATTATGCGCAAGATTGTGGATATAGCTATCAGCTCCATGAAGGA
ATGAGTAGTATATAGGAGCTCATAGAATAAAGACAGAAGAAAACCGTTCA
CACAAATTCTTAGATTTATCGCACCCCCAGAACAACACTTTGTTAGCTCA
CAAGGCTAACAGATGCAAAAAAAATGTAAGAAAAAACATTAAAATCAATT
TTGTAAACATTGGCGCGGCATTGGAGAGTGTGATTAACGATTAATTGCTC
TCTACAGGATGCAATTAACGATTAATTGCTCTCTTTGAGGGCGTGCCAAA
TAAGAAAAAATAACCCATCGTGCGATTATGACCTTAATTGTAGGCGAAAA
TTAAAAAATGTAGTGTTTATCATTGAAATAGAACTTCAAAGATAACTGTT
ATGTACAAACAGTATGAATACTAATGTATCAACTACTAACAAACAAAACT
TGATTTACAAGCGAAAATATCTAACCAAACGATGTTTGATAGCTCAATGA
ACCATATAGATGAACCCATAGTCTGCGGCCGGGTCAGAAAAAAAATGTTT
TACCCGGCCGGTTTCTGGAAACACTGCATTTTTTTATTTTCGCCTTACTA
TTTTTGTTTTGATTTTCAGAGCATTTACAGATGAGAATATGGAATCAACA
AGACATGAAACCTCACTATTCCTTGATCTTCTTCTTCAAAGAAAACCAGT
GGTACCTTTTGGTACAGTTCGACAACTGCAATTACCAACTAAACAAATGG
TAAACTTATTATAGTATTACTGAAAATGAAATGGAATAGGGAAGGGCTTA
TGATTTTGATGGTGCTCTGTATTAGCTGATATTTTGCTTTGCGAAAAAAG
TGTCAGAATTTCAGTCACAATCAGGCTTTTAAGGAGTTTTTACTGACGGT
GTTTTTGAAAAATGTTGGTATTTTGGTGTTGGCGACCATCTTACGCCACC
TAGTTTCTATCTTTATTATATGTTTCAGTGTCGCGTTTTGCAACATTATG
CATTTCTATGTTTTGTTTACAGATCGAGATCAGCAATGTTGTTTCGGATG
TGGAGGCAGCTGATTACGGAGAATGTGTAAGTGGTCTTCATCTGATACAA
ACTAACATTTATGTTGTTCTTTACTGAACTCAATAAATCTTTTGTATTTT
ACAATGGATGTTCTAACTTCAGTTGAGCCAGAATCTGAAAATATCTGTCT
CTCTGTCTGTCTGTCAGTTTGTCGTAAGGACTGATGGATAAACAGGCTGG
AGACATCAAAAAAGGTCGGATTTGGTTGAAGTTTGGCACAAATTGTTTCT
TGGTGTTGTTTCATTTTTAAAAAAAGTTTTAAAATTTTTGGGCATGGTGA
GTATAACAATTGACAGATTCCACAGATTTTGAATTTTCAATTTTTGTATT
TATGTATTATAGGGAATAAAGATTGTAGGGAGATATGATAATTTTATGTT
CCTGATTCGTTACAGGTCGATGATTTCTTCCCTCACCAACGATTATATGG
CACAATCGGAACCTGCTTGTTTTATAAGGTCAGTGATCTGTCTTGAAATT
GTAAGGTCTAGCGGATTACCTACAAACTATTGAATCAAGGCTTTCGATTC
AATTGATAAAAGTCAACATTTTTAATGTCCCATCAATAGCGAAAGTGCAT
TTCATTGTTTTCATTAAATACCTTTTTCAATTTTAGGATAATCTTGTTTG
CTCACATTTGACGGATGAGAATTTACAAGACGTCGTCACCTTTTGTAAAT
ATCATTGGCTTTTCATGTTGGCCAAGTCAGAGAAAATGAAACAACTTGTG
TTATGGAAAGAGGTGAGCTGAGAAATAATTTTTTATGTCGAGAAATGTGT
GAGATATAGGAAGCAAAACAATAGTACTAAAGGTACAATGCGATTCTTGC
TCGAAGAGTAAAAAGTTAGCTCTAACAGTAATTTATGCAAAAGTTTTTAA
AGTCACATAGGCTGATCAATTTCGTCCCCACCTTTAATTTTCCGTAAGAT
TTCTTTCTCATCAATAAAAGTGTGAGATAATGGGAAGGAAAAAATGTACA
CGTTTCATTCTAACCTTTGTTTTCCCTTCATAGATATTCTTGACAGAGAA
AAGTGGAGAGAGCCCGGCTACGAAGAACAGTTACGAAACTCCCGAGAATG
CAAGATGGTTCATTTTGGTCGTCGGCCAGGTAACGTCGTTTTCAAATCGT
TTTTGGGATTTTCTACTTTTTAAAAACACCATATAATTTAAGGTATGAGA
TCTTGTTTTCATGCTCTTAAATTTCTCTTGGATATTTTTATAAACAGTTC
TTTTCTAATACCTTGAACGATCACACTTACCGACGGATTGGTTTGTATAT
TCAAAACTACTTCTTTTTATAGGGACATAGTTTGTTTTGCACTCTTCTTG
AGACTGGTGGTGCTGCTTCCATGTAAGAATTTTACTGTCTGTTTTTCTAG
AAGACAAAAAGTTTTTTTATGTCTTTTTAATGTCAAACTTATTTCAGGTA
TTGTGGTCAAAAATAAAAAAGAATTACCTCTACAAAATAAGCTCCTGCTT
GCTGCTCGTCAAAATTATTATCTTTTAGTTCCATTGAAGATATTGTTTTT
ATGATACAGAAAAGAGACTCGCTTCTTGTTCCGATAAAGCAGAAATTTTT
GTAAGCATATGGTGGCAAATATATTCAATTATATCCTTAAATGTATGCCT
TCCTTTCACTATATTTCAGACCTGAAGGAAACCCTGGTCCTCATCCTTAC
TATGTAGACACAGCATGGTCCATCTTGACGTATCTGATTGAAAATATGGA
TTACGAGACATCTTCACATTCAAGGTAAACATCCATTATTTAGTGGTCAC
ATGGGTACATTGTCACTTTGAACCAATTATAAACTTTCTTCAGAACTAAA
CTAGTTTTTTGTTGAAGAGAACTAGTTCGATTTTACACAGGGTGTCCAAG
AAAAACTTAAATGTAAGATGATATGATTATGTTGATTAATATAAATTGTG
TTCGTCATCTTATTGACGTGTAAATCTTTTCATAATTATTTTATTAAATT
ACCCTTCGTTTAAAATTTAGATTGGAAGGTCCGTCCATACCAGCAGTAGT
TCATGCTACAGAAGCTATCAATCCTAAAACGTCAGCCAGCCCACGTGCTA
TCGAACTGATCAAAAGAAAAGTACCTATCCAGAGACGTCCGCACCATGAT
CATCTCTCGATTTCACATTCTATAAGTAATGAAAGTGATCTTGGTATGCG
AGAACGTTCACAATCGAGGACGTCGAATTTATCAGGGAACAGCAGTAACC
GTCATTACTCTGTCCATGAAATGGCTCCACATTTCAAACAACTCAGTATG
GCTTCCACATCTGAGGTGTCAACAACTGCTGCACTCGCCACCAAGTAAGA
TTTAATTACTTGTGGTTTTTCTCTCGGATTTCTGTCTCTCCCATCTTGTC
TTTCAATCGCAGCTGATAAAATTAATTCGATTCATTTATGATTAAATTTC
AGAATACATAAGTGTGTTACTTAAATCTTATTTAGTTTAAGCATTCTTTA
TACATAGTCTATAANACTCGCCACCAAGTAAGATTTAATTACTTGTGGTT
TTGTCTTTTAATCGCAGCTGATAAAATTAATTCGATTCATTTATGATTAA
ATTTCAGAATACATAAGTGTGTTACTTAAATCTTATTTAGTTTAAGCATT
CTTTATACATAGTCTATAAGTATGTTACAGTAGTATTACTCGAAAAATTC
ACATCCGAGGCTTGAAGGATTTGCAATGGTAAATTTCATGGTATTTCACT
TTATCTTAGGTTGCCGACCGGTTCACATAACACTTTATTTTACTTCACCG
TCTTATCCAATCGAAACGGTGTGTTTGTCTCTCCCAACGCATTCAAAAGC
TCAAATATGTTGACTGGTGAAATTCTGACCAATTACACTTCTGCGTGTGA
AAAGATTCATAAATGGTTTGAAAAGAAACAGGTAAGTTAAACCTTCACTT
TCTTTTATCAACGTCAATCTTATTTTATATACAGTTGTACTATAATACAA
TTGAATTTCTAACTTATTTTCGTTGTATTTTTTAGTTGCTGCCATCGGAA
CCCTTGGAACTTGGTGTTCTCTTTCATCTTCAATTAACGAAAGGTGCCGA
GATGAAAAAAGGATTTCCCAATATTCGATATTGGGTCGTAGGGTAAGTTT
CAATGATTTCTGAAAACCTTTTCATTAAAGATTGTAAAATCTGCTTTAGT
TGTAACCTTCCTTCATCTGATGTTATCATGCCTGGTTTCAAATACAGTTG
GCGCTCTCTAATTCGATTTTCAAGGGAATTGGATTTTCATGGAATAAGGG
ACTGTATTGAAAAGTTTCTTGATGATGGCGACAAAGTTATTGAATAATTG
AGAATAGTTGAGGGTATCGAACATTTTGCATGCCTGAAAATCCTGAAGAA
TCATTGTATTGTGGATATATAGCATTTTCCCTAATCATCATTTCTTTTTC
AGACGTAAGATGAAGAAACGAAACAAATGTGAAGAAGTTTACGTGTGTTT
TCAAGATGGTACTCCTCAAAATGTCATCGAAATGGCTTTCAAAATACGAT
TTGGATGCCATTATTGAGTCAAATATGTCTTGGTTGAAATTCTCTCGAGT
CTTCAGTTCTTCGCTTACTGAATCCGCCATTCAAGATTAGGAAAATTTTA
ATGGTTTTTGTTAAAAATGAAAATATATTTTCTTGGTGTGTTATGTCTTG
TAATATAAGTTTGTGACTATAATTTTGTGATACTGTGTAAATATGTTTTT
GAATACTGCAAACTATTTTTTGAAAAATTTTGGGCTTTTTAAATTGAAGA
AATTTTAACATCATATTTTTTTAATTATTTTTAAGTCGTGAATGAATTGT
AAATATTAACTAAATTTTGGGTTGGGTCGGGTGTTGCCTGATGTTGTATG
GCCCCCACGAAATTTTGATTTTGTCGTTGGTACAAAAAACTTTGATTCAG
AGACTCTTTTGATGAAGTTATTATAACTTGAAGTAAATTTTTAGAATTCC
GAGTTTCGTCTAAAGGCCGAATGACCCGTTGATAAATCGATTGTATAGAT
TTTATTTTATATCTTAGTTATTTATGCTTTTAGTTTTCTTTTGGATATAA
AACGAAATCATCATTGTATATAGCTGACCAAAAGCATGGTAAATCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030096XLOC_030096Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047253-exon-scaffold_123-1575043694:511790..511822TCONS_00047253-exon-scaffold_123-1575043694:511790..511822Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1575043694:511055..511647TCONS_00047253-exon-scaffold_123-1575043694:511055..511647Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1575043694:510635..510720TCONS_00047253-exon-scaffold_123-1575043694:510635..510720Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1575043694:509209..509388TCONS_00047253-exon-scaffold_123-1575043694:509209..509388Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1575043694:508764..508879TCONS_00047253-exon-scaffold_123-1575043694:508764..508879Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1575043694:508448..508537TCONS_00047253-exon-scaffold_123-1575043694:508448..508537Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1575043694:507649..507726TCONS_00047253-exon-scaffold_123-1575043694:507649..507726Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1575043694:503824..503953TCONS_00047253-exon-scaffold_123-1575043694:503824..503953Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1575043694:503497..503550TCONS_00047253-exon-scaffold_123-1575043694:503497..503550Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1575043694:503045..503107TCONS_00047253-exon-scaffold_123-1575043694:503045..503107Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1575043694:502761..502886TCONS_00047253-exon-scaffold_123-1575043694:502761..502886Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1575043694:502394..502489TCONS_00047253-exon-scaffold_123-1575043694:502394..502489Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1575043694:502151..502200TCONS_00047253-exon-scaffold_123-1575043694:502151..502200Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1575043694:501749..501853TCONS_00047253-exon-scaffold_123-1575043694:501749..501853Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1575043694:501179..501502TCONS_00047253-exon-scaffold_123-1575043694:501179..501502Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1575043694:500592..500763TCONS_00047253-exon-scaffold_123-1575043694:500592..500763Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1575043694:500381..500487TCONS_00047253-exon-scaffold_123-1575043694:500381..500487Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1575043694:499375..500070TCONS_00047253-exon-scaffold_123-1575043694:499375..500070Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1510915933:511790..511822TCONS_00047253-exon-scaffold_123-1510915933:511790..511822Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1510915933:511055..511647TCONS_00047253-exon-scaffold_123-1510915933:511055..511647Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1510915933:510635..510720TCONS_00047253-exon-scaffold_123-1510915933:510635..510720Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1510915933:509209..509388TCONS_00047253-exon-scaffold_123-1510915933:509209..509388Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1510915933:508764..508879TCONS_00047253-exon-scaffold_123-1510915933:508764..508879Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1510915933:508448..508537TCONS_00047253-exon-scaffold_123-1510915933:508448..508537Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1510915933:507649..507726TCONS_00047253-exon-scaffold_123-1510915933:507649..507726Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1510915933:503824..503953TCONS_00047253-exon-scaffold_123-1510915933:503824..503953Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1510915933:503497..503550TCONS_00047253-exon-scaffold_123-1510915933:503497..503550Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1510915933:503045..503107TCONS_00047253-exon-scaffold_123-1510915933:503045..503107Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1510915933:502761..502886TCONS_00047253-exon-scaffold_123-1510915933:502761..502886Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1510915933:502394..502489TCONS_00047253-exon-scaffold_123-1510915933:502394..502489Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1510915933:502151..502200TCONS_00047253-exon-scaffold_123-1510915933:502151..502200Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1510915933:501749..501853TCONS_00047253-exon-scaffold_123-1510915933:501749..501853Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1510915933:501179..501502TCONS_00047253-exon-scaffold_123-1510915933:501179..501502Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1510915933:500592..500763TCONS_00047253-exon-scaffold_123-1510915933:500592..500763Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1510915933:500381..500487TCONS_00047253-exon-scaffold_123-1510915933:500381..500487Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1510915933:499375..500070TCONS_00047253-exon-scaffold_123-1510915933:499375..500070Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1491911889:511790..511822TCONS_00047253-exon-scaffold_123-1491911889:511790..511822Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1491911889:511055..511647TCONS_00047253-exon-scaffold_123-1491911889:511055..511647Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1491911889:510635..510720TCONS_00047253-exon-scaffold_123-1491911889:510635..510720Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1491911889:509209..509388TCONS_00047253-exon-scaffold_123-1491911889:509209..509388Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1491911889:508764..508879TCONS_00047253-exon-scaffold_123-1491911889:508764..508879Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1491911889:508448..508537TCONS_00047253-exon-scaffold_123-1491911889:508448..508537Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1491911889:507649..507726TCONS_00047253-exon-scaffold_123-1491911889:507649..507726Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1491911889:503824..503953TCONS_00047253-exon-scaffold_123-1491911889:503824..503953Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1491911889:503497..503550TCONS_00047253-exon-scaffold_123-1491911889:503497..503550Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1491911889:503045..503107TCONS_00047253-exon-scaffold_123-1491911889:503045..503107Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1491911889:502761..502886TCONS_00047253-exon-scaffold_123-1491911889:502761..502886Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1491911889:502394..502489TCONS_00047253-exon-scaffold_123-1491911889:502394..502489Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1491911889:502151..502200TCONS_00047253-exon-scaffold_123-1491911889:502151..502200Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1491911889:501749..501853TCONS_00047253-exon-scaffold_123-1491911889:501749..501853Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1491911889:501179..501502TCONS_00047253-exon-scaffold_123-1491911889:501179..501502Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1491911889:500592..500763TCONS_00047253-exon-scaffold_123-1491911889:500592..500763Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1491911889:500381..500487TCONS_00047253-exon-scaffold_123-1491911889:500381..500487Clytia hemisphaericaexon
TCONS_00047253-exon-scaffold_123-1491911889:499375..500070TCONS_00047253-exon-scaffold_123-1491911889:499375..500070Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_123supercontigscaffold_123:499375..511822 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.424033	0.609792	0	0.0432966	0	0	1.22646e-08	0	1.0485	1.49208	0.709401	1.21	9.28785	9.74236	8.10893	8.8025	11.4096	7.79472	4.56406	4.66926	7.93513	11.1146	3.1821	4.31711	0	1.96679e-08	2.50414	0.445391	3.7917	1.58686
Blast
[Close]
BLAST of TCONS_00047253 vs. Swiss-Prot (Human)
Match: INTU (Protein inturned OS=Homo sapiens GN=INTU PE=1 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 7.139e-58
Identity = 140/431 (32.48%), Postives = 220/431 (51.04%), Query Frame = 2 
Query:  569 IVVQGIIPNSPAGES-EINIGDIILAINGIKVNLQSVNSIVEKINGTQEIVLTIERLATVVEPEKPSELCSIVSNTLD----------EGAKEDVFHAYHDTCMVSLLTLNSNEDDVDGDILFWYPDSEKSKILRNTRGIFLTLSDMLTDVMAEHIQSSVLYTNKETINVAYKKCGGNVLVVAAPDHKCDLNTLISCTDDFAKLLTILNGDLNRAFTD-ENMESTRHETSLFLDLLLQRKPVVPFGT-------------------VRQLQLPTKQMIEISNVVSDVEAADYGECVDDFFPHQRLYGTIGTCLFYKDNLVCSHLTDENLQDVVTFCKYHWLFMLAKSEKMKQLVLWKEIFLTEKSGESPATKNSYET-PE-NARWFILVVGQGHSLFCTLLETGGAASIPEGNPGPHPYYVDTAWSILTYL 1762
            +VV G++P   A +S ++ IGD+++A+N + V  +++  ++  I G  ++ LT E    V             SNT D          EG ++   +  H   M   L L+S     + +IL+ YP SE S+ L++ RGIFLTL DML +V    + SS L  N + I+VAY K    +L++  P  +  L  L +  ++  + L  + G L+ AF   EN+    H  +LF    LQ   +    +                   VR L LP +  +E+   +SD+EAAD+ E  +D++  +RLY  +G+ LFYK  L+CSHL  ++L D+  +C+++ L  LA  +++ QL++W+E+F   +    P   +S E  PE   R+F+LVVG  H + C LLE GG AS   G+PGP   YVD   + L  L
Sbjct:  208 LVVHGLLPGGSAMKSGQVLIGDVLVAVNDVDVTTENIERVLSCIPGPMQVKLTFENAYDVKRETSHPRQKKTQSNTSDLVKLLWGEEVEGIQQSGLNTPH-IIMYLTLQLDSETSKEEQEILYHYPMSEASQKLKSVRGIFLTLCDMLENVTGTQVTSSSLLLNGKQIHVAYWKESDKLLLIGLPAEEVPLPRLRNMIENVIQTLKFMYGSLDSAFCQIENVPRLDHFFNLFFQRALQPAKLHSSASPSAQQYDASSAVLLDNLPGVRWLTLPLEIKMELDMALSDLEAADFAELSEDYYDMRRLYTILGSSLFYKGYLICSHLPKDDLIDIAVYCRHYCLLPLAAKQRIGQLIIWREVF--PQHHLRPLADSSTEVFPEPEGRYFLLVVGLKHYMLCVLLEAGGCASKAIGSPGPDCVYVDQVKTTLHQL 635
The following BLAST results are available for this feature:
BLAST of TCONS_00047253 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
INTU7.139e-5832.48Protein inturned OS=Homo sapiens GN=INTU PE=1 SV=2[more]
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