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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047269 ID=TCONS_00047269|Name=TCONS_00047269|organism=Clytia hemisphaerica|type=transcript|length=1009bp
aaaaagtgtcaatatggAATTTGGTTGGTTGGTCTTATTTGTAATTTTGC
CAACAGAAATAGTTGCAATAAATTTCTACCAAGTTGGGATTTTCTCTATT
TGCAAAAATGATAGTTCGGTGAACacaacattaaaaatatatcGAGATGC
GCAAAGCTATAGTGATGTATTGCcaataatcttggaagatagtTTATTAT
TAGCACATTTGTCTTTGGACAACGATAAAAGAAGTGGTGCTATTGAATAT
ATACCGATTGATGTATGTAATGATTTTGACCAACTGGTATCAACCGTTAT
TGATTGTATCTTATCCATTAACTACACAAATCCTGTTGATGACCCATTAC
GTGACCAATATTTGAACGAATCTTCTGTTTTCGtcatttatactttttta
cCACCTAAAATGACATCTTTTGTCAAGAGCTTTTTTACATTTACCAATAT
TCATGTAAACTGCATCGaattttctcatcttcaaaaTAACGTATCAATTC
ACTCGGATATATACTCAGGATACACAAACTACTTATCAAATGTTGTAgat
atattggaattagaggATCTTTTCTtggttttgaaaacaaacaagAGACA
GAAAATTCAAAGGAACTTATATCGCACATACTTCCAGAAAAGCATCAACC
TCTTTGCCAGCCAAAAGAAATGCATTCAATTCCTTCATATCAAAATATCA
GATTCTAACAGTTATCATTTTAACACCTCTATGTTTGAAGGGCATAAAAA
TCCTGCAATTATAATATTTGGCAACAATTATGACACTTACTTAACCTTAA
AGAAGTTAAAAGGTATCCAAAAAAGTATTTCTGGTTTAAAAATACTGGTA
CACGACTTTACCGAcaacattttttctttgaaaatgtttggTGGTTTAGA
AGACTTGCCTGGTCAACTGATTGATGTTAACAACAAGCATAGACATCATA
CGGAATCATTACGGAAAAACAATTATATTACATccattaaaaatttgaat
aatcttGAC Run BLAST on NCBI protein sequence of TCONS_00047269-protein >TCONS_00047269-protein ID=TCONS_00047269-protein|Name=TCONS_00047269-protein|organism=Clytia hemisphaerica|type=polypeptide|length=336bp
KSVNMEFGWLVLFVILPTEIVAINFYQVGIFSICKNDSSVNTTLKIYRDA
QSYSDVLPIILEDSLLLAHLSLDNDKRSGAIEYIPIDVCNDFDQLVSTVI
DCILSINYTNPVDDPLRDQYLNESSVFVIYTFLPPKMTSFVKSFFTFTNI
HVNCIEFSHLQNNVSIHSDIYSGYTNYLSNVVDILELEDLFLVLKTNKRQ
KIQRNLYRTYFQKSINLFASQKKCIQFLHIKISDSNSYHFNTSMFEGHKN
PAIIIFGNNYDTYLTLKKLKGIQKSISGLKILVHDFTDNIFSLKMFGGLE
DLPGQLIDVNNKHRHHTESLRKNNYITSIKNLNNLD Run BLAST on NCBI transcript from alignment at scaffold_123:434165..435173 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047269 ID=TCONS_00047269|Name=TCONS_00047269|organism=Clytia hemisphaerica|type=transcript|length=1009bp|location=Sequence derived from alignment at scaffold_123:434165..435173 (Clytia hemisphaerica)
GTCaagattattcaaatttttaatggATGTAATATAATTGTTTTTCCGTA
ATGATTCCGTATGATGTCTATGCTTGTTGTTAACATCAATCAGTTGACCA
GGCAAGTCTTCTAAACCAccaaacattttcaaagaaaaaatgttgTCGGT
AAAGTCGTGTACCAGTATTTTTAAACCAGAAATACTTTTTTGGATACCTT
TTAACTTCTTTAAGGTTAAGTAAGTGTCATAATTGTTGCCAAATATTATA
ATTGCAGGATTTTTATGCCCTTCAAACATAGAGGTGTTAAAATGATAACT
GTTAGAATCTGATATTTTGATATGAAGGAATTGAATGCATTTCTTTTGGC
TGGCAAAGAGGTTGATGCTTTTCTGGAAGTATGTGCGATATAAGTTCCTT
TGAATTTTCTGTCTcttgtttgttttcaaaaccaAGAAAAGATcctctaa
ttccaatatatcTACAACATTTGATAAGTAGTTTGTGTATCCTGAGTATA
TATCCGAGTGAATTGATACGTTAttttgaagatgagaaaattCGATGCAG
TTTACATGAATATTGGTAAATGTAAAAAAGCTCTTGACAAAAGATGTCAT
TTTAGGTGgtaaaaaagtataaatgaCGAAAACAGAAGATTCGTTCAAAT
ATTGGTCACGTAATGGGTCATCAACAGGATTTGTGTAGTTAATGGATAAG
ATACAATCAATAACGGTTGATACCAGTTGGTCAAAATCATTACATACATC
AATCGGTATATATTCAATAGCACCACTTCTTTTATCGTTGTCCAAAGACA
AATGTGCTAATAATAAactatcttccaagattattgGCAATACATCACTA
TAGCTTTGCGCATCTCgatatatttttaatgttgtGTTCACCGAACTATC
ATTTTTGCAAATAGAGAAAATCCCAACTTGGTAGAAATTTATTGCAACTA
TTTCTGTTGGCAAAATTACAAATAAGACCAACCAACCAAATTccatattg
acacttttt Coding sequence (CDS) from alignment at scaffold_123:434165..435173 >TCONS_00047269 ID=TCONS_00047269|Name=TCONS_00047269|organism=Clytia hemisphaerica|type=CDS|length=1008bp|location=Sequence derived from alignment at scaffold_123:434165..435173 (Clytia hemisphaerica)
GTCaagattattcaaatttttaatggATGTAATATAATTGTTTTTCCGTA
ATGATTCCGTATGATGTCTATGCTTGTTGTTAACATCAATCAGTTGACCA
GGCAAGTCTTCTAAACCAccaaacattttcaaagaaaaaatgttgTCGGT
AAAGTCGTGTACCAGTATTTTTAAACCAGAAATACTTTTTTGGATACCTT
TTAACTTCTTTAAGGTTAAGTAAGTGTCATAATTGTTGCCAAATATTATA
ATTGCAGGATTTTTATGCCCTTCAAACATAGAGGTGTTAAAATGATAACT
GTTAGAATCTGATATTTTGATATGAAGGAATTGAATGCATTTCTTTTGGC
TGGCAAAGAGGTTGATGCTTTTCTGGAAGTATGTGCGATATAAGTTCCTT
TGAATTTTCTGTCTcttgtttgttttcaaaaccaAGAAAAGATcctctaa
ttccaatatatcTACAACATTTGATAAGTAGTTTGTGTATCCTGAGTATA
TATCCGAGTGAATTGATACGTTAttttgaagatgagaaaattCGATGCAG
TTTACATGAATATTGGTAAATGTAAAAAAGCTCTTGACAAAAGATGTCAT
TTTAGGTGgtaaaaaagtataaatgaCGAAAACAGAAGATTCGTTCAAAT
ATTGGTCACGTAATGGGTCATCAACAGGATTTGTGTAGTTAATGGATAAG
ATACAATCAATAACGGTTGATACCAGTTGGTCAAAATCATTACATACATC
AATCGGTATATATTCAATAGCACCACTTCTTTTATCGTTGTCCAAAGACA
AATGTGCTAATAATAAactatcttccaagattattgGCAATACATCACTA
TAGCTTTGCGCATCTCgatatatttttaatgttgtGTTCACCGAACTATC
ATTTTTGCAAATAGAGAAAATCCCAACTTGGTAGAAATTTATTGCAACTA
TTTCTGTTGGCAAAATTACAAATAAGACCAACCAACCAAATTccatattg
acactttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047269-exon-scaffold_123-1491911889:434165..435173 | TCONS_00047269-exon-scaffold_123-1491911889:434165..435173 | Clytia hemisphaerica | exon |
| TCONS_00047269-exon-scaffold_123-1510915933:434165..435173 | TCONS_00047269-exon-scaffold_123-1510915933:434165..435173 | Clytia hemisphaerica | exon |
| TCONS_00047269-exon-scaffold_123-1575043694:434165..435173 | TCONS_00047269-exon-scaffold_123-1575043694:434165..435173 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_123 | supercontig | scaffold_123:434165..435173 . |
Blast
The following BLAST results are available for this feature:
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