TCONS_00047282 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047282
Unique NameTCONS_00047282
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1738

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047282 ID=TCONS_00047282|Name=TCONS_00047282|organism=Clytia hemisphaerica|type=transcript|length=1738bp
GCCGGGTGAAAGCGAAGAGCATCAGAAGTGCACACGTTTCGCTGAACGCT
CATGTAAAGCAAATCGACAGGTGAAATTCCTTTTGCAATGCTTGAAGTCG
AAAGGATGTGAGGTTTCACTTGAAAGCGAAGGAATAGTATGTGAGCGTTG
CGAAGATCAATTGTTGGGAGGTTTTGATCCATCTGCTAAACAAGTTGTGT
TATGCCAGAACAATTTGAAAACCCAGGCTGATATCGATCGAATTCTTTCA
CATGAATTAATTCACGCTTTTGACGTTTGTACTGTGAAGTATGACGTCAA
CGATACAAGACATTTAGCCTGTTCTGAGGTTCGTGCCTCAACATTGAGTG
GGGAATGTTCGTTTTCTCGTGAAATGTTCAACTATTTCCCTTTCAAAATA
CGAAGACAATATCAGGAATGTGTGAAGCGAAAAGCAACGAACAGTATCTG
CGCATCCAAACATCTTGATCGGGACGAAGCAAGAAAACTTGTTGAAGAAG
TTTTCCATTCATGTTTTTATGATCATTCACCGTTCAAAGAAATACCGAGA
AATAACTAGAGAAAGTTGAAGAAGAGAGGGAAAGTATGAAGGTGAAATAT
TTGGTTCTCCTTTGCTGCTTGTTTGGGCTGACCAGAACTGCTCCTGCCAA
GAAAGAAGATAAATTACCTGTCCGACTGTATGGAGAAAGTGGCCGCgaga
tgaatgaaaagaaagaGGCAATGCACTCAGGAAAGGATAGTGTtgctgaa
aaagaagaaggaaaattGAAGGCAAAGAAAGATGCGGATGAAGATGttca
caattttttgaaatctcaaTCGTTGCCATTCATGTTCCAAAAGAAAGATG
AAATACCTTtccatttcaagaaaaacaCACTGCCGTTCCTTCACATGAAG
AAAGAATCGATTCCGTTCCATTTCCGCAGAGAAAACATACCGTTCCATTT
CCGCAGAGAAAACATTCCGTTTCATTTCCGCAGAGAAGCATTGCCGTTCG
CATTCAGTCGTTCACTCGAAGAAGAGGAAATCCCTTTCcatttcaaaaag
aaagaatttccATCTTTCCACATTGGGAAGAAAGAGTTTCCAGTTTTCCA
CTTTGGGAAGAAAGATGAAATCCCTCTCTTCCACAGCAAGAAGACAGTTC
TTTATCCAGAAGTTGACGAAAACGAAGTGCTGCAAATGCTCAACAGTCTC
AGTGACGCCCAATCACCCTACCACAGAATTTTCCAAAGACGTGAAGCGAA
TCCTTTATATGCAAATATTGGAAGGTACGGTCGTCGCTCGATTCCCCGAT
TGAATCGATATGGGAAGCGTGCGGTATTCTTGTCAGATGTAATGGACGAG
CGCAAACCTATACCTCTTCAACAAGCCTTCAACCTTCGATTACCGTTGTA
CCAGAAACGGGATGGCGCTCTCCCCTTACCTTACGCTTTCGACAAGAAAA
GAGAGTCCACACAACGCTTCGGTAGAGATTATCTCAAATTGGGGAAAACT
AAAAACTCTATGAAAAAAATCGTCGAGCTGCAATTTACTCCTTTCTCTCG
AAGATACGGGAAATAACTTTTAATATTCAAATTATTAATTCTAGTATTAA
AAGGACAAAGCGCAGTgcgtattttttatttttcaagggCAGCATAGATG
AGAGATTGACTTTAATCATGACAAATTTTGTATAATAATAAATACCTATT
TGttgaatttaggaaaaagttttTGCACAATGGAGAAC
Run BLAST on NCBI

protein sequence of TCONS_00047282-protein

>TCONS_00047282-protein ID=TCONS_00047282-protein|Name=TCONS_00047282-protein|organism=Clytia hemisphaerica|type=polypeptide|length=326bp
MKVKYLVLLCCLFGLTRTAPAKKEDKLPVRLYGESGREMNEKKEAMHSGK
DSVAEKEEGKLKAKKDADEDVHNFLKSQSLPFMFQKKDEIPFHFKKNTLP
FLHMKKESIPFHFRRENIPFHFRRENIPFHFRREALPFAFSRSLEEEEIP
FHFKKKEFPSFHIGKKEFPVFHFGKKDEIPLFHSKKTVLYPEVDENEVLQ
MLNSLSDAQSPYHRIFQRREANPLYANIGRYGRRSIPRLNRYGKRAVFLS
DVMDERKPIPLQQAFNLRLPLYQKRDGALPLPYAFDKKRESTQRFGRDYL
KLGKTKNSMKKIVELQFTPFSRRYGK
Run BLAST on NCBI

transcript from alignment at scaffold_124:25047..33911-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047282 ID=TCONS_00047282|Name=TCONS_00047282|organism=Clytia hemisphaerica|type=transcript|length=8865bp|location=Sequence derived from alignment at scaffold_124:25047..33911- (Clytia hemisphaerica)
GCCGGGTGAAAGCGAAGAGCATCAGAAGTGCACACGTTTCGCTGAACGCT
CATGTAAAGCAAGTAAGAATCCACGGTATTCCCTCTCTCTTCAACACTCC
CATAGAACGGAATTTCTTTGGTTTGATATTCAAATCAATAGCTTTAGTAC
CTTAAGGGAAGTAATTTTCACGGTCGAAAAGAAATTCGAAAAAATCGCAT
TTCGCGGGAATTAATTTTCGTGCTTTCGCCCTATTTTGGACACATTTCTT
TCATTTTCCTACGGTTTTTCCAAATTTTTTATGAATAATTACCATATTTG
TAATTCTAATTTTTTTGGACAAAACTGCGAAAAAAATTAGTTCTCACGAA
AATTAGTTCGCTTTATAACGTATTAGTTCTTAGAAAACAGCCCATGATGA
ATAGAATATAAGAAGTTAAACAATAACGCCATTGCAATTTAAAGTTATTA
TAACGAACTAGGTTTAGACCTTTGGAAAGCTGTGTGACTTATTAGAAAGT
CATTCAAAAACAAACTCAAAAGTCTGAGTCTAAAATTTGAGTAAAATTTT
AGGCGATATTTCGAAAAATGATGGTTTACTGTCATGCTTTGAAAATATAA
TGCAATTTTAAAGAGCTGCGATACAGAACAAGAAAATCTCCAACATTCTA
GAAAACTAGTCTGAATCGCAGAGCTTTATAAAACAGTAGGTAGTATCTAT
ACGAATCTGTACGAATCTGTATATTGTTGTATATTGTGACAGATAGGACG
AGTGTTAGAAGTTTATTCTGGCTGAATCATGCCTGAACCCTTTCTCCTTG
ACCATATTTAGTTTGATATTCTAAGAATTTCATTATATGGATTGTTGATT
ATTGTTTTTCTAGGAGGGGGAGATGTGTGCTAGTTCCCTTTTCCTACTTT
TCCATCTAATTGATCGACCTTTCATTCCTGTTTCAGATCGACAGGTGAAA
TTCCTTTTGCAATGCTTGAAGTCGAAAGGATGGTAGGTTTTTATCTTTTC
GATCTGTTGGCTCGCTCCTTCCTGTTTCGCTTCATTCCACCAAAACAATC
CAACAGAAAAAATACACAATGGGCTCTTCATGAAATTTTTTGTACGGAGG
GGGGGATTGAAGGATATATTGGATATTTTGTCCGGCGGGTAGTGAAAAAT
CTGCAGAATTTGATTAGGGTTGATTTTCAATATCCGGGGGTCAACTGATG
CTTGTCCAGGATGTCAATTTTTTTCTGAAAGACCCCAATTTTCTCAACTT
CTCCATTTCAGTGAGGTTTCACTTGAAAGCGAAGGAATAGTATGTGAGCG
TTGCGAAGATCAATTGTTGGGAGGTTTTGATCCATCTGCTAAACAAGTAA
ACTGTTCCTTTGACTTTACCTGTCTTCTTTCTGTTGGCATCTTGATCCAT
TCTTCATAAAATTCTCTCAGTTTTCTGATGACTTCCCAATAGCGTTCGCT
TAATACCATCCGAAGAAAAATATTCCTTAAGTGGGTTAGTTTTGGTGTGG
AATTAATTTGGAGATTTTTAGCGAGGATGGGAAATTTTTAGGCTCTGGTA
AATTAAAGATTACTTGCTGGTATTTTACTAAAGAATGTATGGATATAATC
TACAGAAGGACAAGCTTTTGTTAAATTTGGCGGGGATTTTTGCAAAAATT
TGCCAAATTCATCAAATTTAATCCCTGCCAAAATTATTTCACCTATGTAA
GGTAATCAACTTGAATATAAAAAAAGTTAAAGTTGCGAACTAAAGACGTC
AACAAAAAAGGATGATCCGTTGAGCTTTTCTTCCAAACCGAAAACGTGTG
TACTGAAACAATCTCATGATTTGCCCGATTGCCCTGATTTTTTTATTATT
TCACTCTCTACGAGTCTTCTGGTGGAAGGCTGGGGGTCATCCAGAGACCT
CCTTGAAACAAAAAGTAACTCATCAAATAACAATGGAGGCTTTTTCGTAA
TCTTAGGTTGTGTTATGCCAGAACAATTTGAAAACCCAGGCTGATATCGA
TCGAATTCTTTCACATGAATTAATTCACGCTTTTGACGTTTGTACTGTGA
AGTATGACGTCAACGATACAAGACATTTAGCCTGTTCTGAGGTAAGCAAG
CATACTATTCTCCAATTCCATCGCAAAATTTTACCTCTCCCTCTGGCCAA
GTAATCCGCTGTTTGCAAGCATTGTTTTATGAAGTTATGTAATCATTGAA
AAAGAAGGTTTTATTTCGAAGTATTTTCAAACCACTTTAACGTATTATGA
TTTGTTTTCCTTTTATTCTCTATATTTTTAGGTTCGTGCCTCAACATTGA
GTGGGGAATGTTCGTTTTCTCGTGAAATGTTCAACTATTTCCCTTTCAAA
ATACGAAGACAATATCAGGTAACTACTAGTGATGCCGTTGTTTTGTTTTA
AAAACACCATACCTGGTAAATAAGATTTCTGTCCAGGCAAAAAGAAATTT
GAAAATCGAACCACCATCCTATGACCCCCGTAGTATATGATGACCTTTTC
TTTTTAACATTACAAAGATAAATCTGTTTTAAACGTACGAAACAAGGGTT
TACGGCTGTTCTTACGTTAATAATTAGGTCAATATGCGGATGTAATTTGA
AGGGCTGATTCACATCTCTTACAACAAAGACATTTTCAGAGATACGCGTA
GGCTGCATCAGAACACAACTTGAATTGTTTAATGAGTCCTAACATGAAAG
GGAATAACGCCAACTCTCAAGAAAAAAGCTTTAGATCGGGGTTGTCGATT
CTAGCCCTTCCTACACCCTGGTAATACGAAACTCATAAAGGCTTAGTGCT
AATAGAGTCTGGAATGAGATGGGCAAAAATGCTCAGTAAATAAAACCGCG
AATAATAGAACTGATTCAAAACAGACTACATTGGTTTGCTTTGCGTTGGA
ACTAGTCTGTAATAGAAAGCCACACCTTGGACTTCTCTACTCTTTAAGAA
TAAGAATAACCATTTTACCTTATAAACCTTATATTATTTTTCCGAAACTC
TTCATCTTGCATACGCACTGTACCAAAAAAGTTTTTCAACCGATAAGTTT
TGAACACTCTTATGAACTTGTCTGGATGATTTTAGCCAGAGTTTCAGACG
TGATGTCTAACCTCCGTTCAACGAATTTTCACTACACTTATACAAACTAT
TAGCTTAGAACCTTGGCTAGGNTCAACGAATTTTCACTACACTTATACAA
ATTATTAGCTTAGAACCTTGGCTAGGGTGTTTTGAAAGATTCTATGAATA
AATGTCTTCTTTCGTTTGAAGGAATGTGTGAAGCGAAAAGCAACGAACAG
TATCTGCGCATCCAAACATCTTGATCGGGACGAAGCAAGAAAACTTGTTG
AAGAAGTTTTCCATTCATGTTTTTATGATCATTCACCGTTCAAAGAAATA
CCGAGAAATAACTAGAGAAAGGTAAGAAGAGAGTGTCTTCAACAGATTTT
TTAAATTCTGGTGGATTTTGACGGGAATTTAGTTTGGCGGATGATCTTTT
TCAGAGGGAATTTAAATTGGCGAGATGGCTTGAAAAAATAAATTTGGCGG
GAATTTAATTTGGCGGATGGTGGAGAAAATTAAATTTGGTAAAAATCCGC
CAAATCAAGAATAGTGATTTCAATCACATTGAGGATACTTCAATTTTGAG
TGATTTTTGCTTAAAAACTTCTACCTTAAACTTATACCCGAAACACGAAG
GGTATGGAAAATCTTTCCAGTTTCAAAATGGAGTACACAGTAGTGTAATG
TAAATCAGTATATCGTTTTGAAAGTCGAGAAAATGAAAACAATTAATCAT
GGTTCTGTCAATTTCCAGACACAATTGTATAATTGGCTAGACTAGGTAGA
AATTTACATTTTATACAAAAGAATCCAAAAAATTAAAGCCTGGAAAACCC
GAGTTAAAAAACCCGAGTTAGGAAAACCCGACTTATGAAAAACCCGAGTT
ATGACGTCATAGTTCGGGTTTTTAAGATGCACCTTAATTTTCCGAGTCAA
TTTTAACTTTGTCATTTTAGGTGGCACCTTAAATTTTCGAGTTATATAAC
TCGGTTTCTTTAGGTACACCTTAATTTTTCGAGTTACATAGCTCCTTCAT
TTCAGGTAGACCTTAAATTTTCAAGTTTTTTAAGGTGCACAATAATAATA
ATGATTTTCAATTTTGCAAAAATATACGTACGACCAAGATGTTGATTCGC
TCGATTGAGATCAAAATCATCGATTGAAGCTTATATAAATTGGTACAACT
GCCCTATCTGGGCAAGTTGAATACAGAGCTATATATCTCTTCAGTGAGGC
CTATTCACTTCTGAAAGATATAACTCTGCAGGCAAAGGCTTGAAAACTCG
GAGAAATTCTGAATGGTGGAGACTAAGTATAGTAGACAGCATTGGTCAGA
ATTAGATTGAGAGATATGAAATAAATTAAAAATTTATCTTAAACAATATT
TGTCGGAGCAAAAGAAAAGCAAAAGTAGTGTTGTTGAAATGTGGGATTGA
GCTTGAAAATAAGCTTGTGGTAAAAAAGAAGTGAGATCGTGATCGGCTAA
GGTATTTAAAGGTTCAAAGTAAAAAAAAACTCGATTGCTTGAAAAAATGA
CTAAACATGAAGCACTAGAGATATAATAATTTAAATTTGAAATATAGAAA
ATAAAATAATTATTATCTTATCGATAACTTGGGAGACTAGAGACTTGAAA
GAAAATAGACAAAACTAGAAGTAAATTGCGACTTGGATTGGAGAATTGTG
GACATAATGAATTATTATTGATATAGAAGTCTTCCTAGTAGTGATTGTCA
AAATGTCGAATTTGTCGAGTGTCATAAACTAATGTTGCATAATATATATT
GCATCTAATAAATATTTTTTTTAAAGAATTACAAAATTTAATAGAATCAA
CCTCTTCCCGAATAGCCTTTGGGATATCATTCAAAATGCGACTTGCCTTG
CCAATAAACAGTTTTTCAGATACATTACATACATAATTAGAATCAATCTC
TTCAACATTTTACGCATGTACGATATATGGCCTCCACTGTATGCTGTCCC
TGTGCCGCTCTATTCGAAGAGAGAAAATTACGGTATGATTGACCATAAAA
ATAACTCGAACATTTAAGGTGCACCTTAAAAAACTTGAAAATTTAAGGTC
TACCTAAAATGACCCACTTATGTAACTCGAAAAATTAAGGTGTACCTAAA
AAAACCGAGTTATCCATAACTCGAAAATTTAAAGTGTACATAAAATGACC
GATTTAAATTTAACTCGGAAAATTAAGGGGCACCTTAAAAAACCGAGTTA
TCCATAACTCGAAAATTTAAAGTGTACATAAAATGACCGATTTAAATTTA
ACTCGGAAAATTAAGGGGCACCTTAAAAAACCGAGTTATGACGTCATAGC
TCGGCTTTTTATAACTCGGTTTTTCATAACTCGGGTTTTTTAACTCGGGT
TTTCCAGGCCTCTAAAAAATTCACTATGATATCAGCGCCCTTTAACATTC
GATTTCTTCACATTTACAACAATATTCTGTGCAAAACTAAAAGGTATGTG
ATTAATATTAATTATTAATATGACTTAGTATGACGAGGTATGTGATTTTT
CACCAGTTTTTCATCCTTTTAATAAAATATCCTTACTTTGAAAAATTAGA
CCTTGCTCAATCAATATATTAGTAGTTTCAGAAATCTTGAAATATCCAAA
GTTGGTCGTTGGTCGGGATGAAAAGACATAGAGTGAAAATTTAGTTATGG
GGAAAGTCTGTAAAAATTATGTGTCACTGTGTTCGCCTCATCTTCTCGAG
TATCGAACACGATTGCAGATAAATAGAAAATTCAGTGTCTACCCTGATTG
AGGAAATTTAAAAAGGTTTTAAATTCTAAAGAAATTTTTCGATTTCGATT
TCCGTAACTTTATCCGCAGAGTTATGACTAATCAAAAAATCGTACTTTTT
TAAATTTGAAAATGATTAGAAATCAAGAAAGAGGCTTTCACAGTACGTTG
GTTTAATTGACTGCGAATTGAAGATCGAATGTGATTTTATTTTTCTATAA
ATCTGACATTTCTATTTCATTTCACTTGAAGATGTTTTTGTTGTTGATCA
CTGAGCCAGGCGTGCAAAGCATCTGAATTTCGAAATGAAAAGTATCTCTC
TCTTAAAAGGTTCATTGTTTGAAATTTCTCAGTGGTACAAAAGCTAACGA
GGAGAATCTTTTTAGTCTTTAAATCTCTAAATGTCCTCGAAATAAAACTG
TTGGACAGGGAAATTCTCAAATCTCGCTATTCTTTTGTGACTTTCTGACG
GGGGCTTAAAGTTTTTCATTTCATCCTTAATCCTTTGTATTTGAACCAAA
GTCTCAGTTTTTCAGTTTAAAATAACCGTTATAGATATATTAGTTTTTTG
AATTTATTGGGAAATTATTTTTGGAAAACGGGAAAATTAAGACCCCCTTA
TTGTGTTGGTATGGTCTCTCAGTAAAATCAAATCTTATAAAGCTTTGCCA
TTAAGGGTCTTCATTCTTTAATTCTAATCAGTGGATCTTAGTTAGAGGTA
AGACTACTTTTTGGCCCTTTTCTTCCTTTCTTTCTTCTCTTAAAAGCTTT
CGCTTTCGTTTTCTTTTACGTAAGCATACGATTGATGTAGAATGTAGAAT
CTCAATGTTATGAAAATGTAGTTGGTCAATGTGTGTAAGCACTGACAGAC
TTCGAATGTTGTTGGGAGGCCTCTAATTAGGTAGGAGTGTTTTTCAATTT
TTTTTTCATACGGCCATATGGTTAAATCCTTAATCTCAGAAGATCTCCCA
CTTAGGTATTAGAAGGATTGAGCTATAACTATATAACTAGTCATAAAGTG
GAAATTTTCTGATGACACTATGAGCCGAATTCTATTTGGCTCCTCGACAT
CTATCTATCCGAAAAGGAAAAGTGTGCTGGCTCCTTTTGCAACACATGGT
GTAATTTGTAGTCATTTGAATAAATACTTGATATTCCCTGAGTCCCCATG
AACTGTTAGATTTGAATGACATTTGGTAGAAATCTTCTTTCTATGAATAG
CTGAGAGTTCCTTTTATAATTTCTTGAAAAATTATGTCTTTGACCCTTGA
GACCGGTTTTAAATCAGAAGAATGAGCAATTAAAATCGACCTTCAATACA
CCTTTTCGATACTTATAGCCCACTTAGGTATTAGGGTTTTTTTCAATTTT
ACTTCAAGTTCCTATTGGTACTATGGCAAGCGTCTAATACAATATCACAT
GGAATTTTTGAAGGCCTTCGAAATATTGCGACTCCTTATTACCCAACTCT
TGTTCAGACTCAATACCAAAATAAAATTCCGTCGTTTGCGACGACAGGAA
TCGTCTAAGTTTTTATTTAATTCGCTTCCTAGACTTAATACCAAAATAGT
TTTTATTTCAAACATTTTGAAATTGGCGTTATTGCGATTTATTTTATGAA
ATTTATAGGAAGTTATACGAACTTTATTCTTTGTTTTTCGCAATACAACC
GTTATTCTCAAATCTCGTTTTCTGTCTACGCCTTTGTACACAACAAAAGA
AAGGTACCAAAGAATTTCCGTTTTTTCGGCCACGAAATTCAGTTAACGGT
CCTTTCTTGGGAATTTTTTTATCTTTCTCATCTGTCGTTAGAAAGAAAGT
TACAAAACGAAATGTTAATTCAAGAAAACTTTGTTTTTTCAGTTGAAGAA
GAGAGGGAAAGTATGAAGGTGAAATATTTGGTTCTCCTTTGCTGCTTGTT
TGGGCTGACCAGAACTGCTCCTGCCAAGAAAGAAGATAAATTACCTGTCC
GACTGTATGGAGAAAGTGGCCGCGAGATGAATGAAAAGAAAGAGGCAATG
CACTCAGGAAAGGATAGTGTTGCTGAAAAAGAAGAAGGAAAATTGAAGGC
AAAGAAAGATGCGGATGAAGATGTTCACAATTTTTTGAAATCTCAATCGT
TGCCATTCATGTTCCAAAAGAAAGATGAAATACCTTTCCATTTCAAGAAA
AACACACTGCCGTTCCTTCACATGAAGAAAGAATCGATTCCGTTCCATTT
CCGCAGAGAAAACATACCGTTCCATTTCCGCAGAGAAAACATTCCGTTTC
ATTTCCGCAGAGAAGCATTGCCGTTCGCATTCAGTCGTTCACTCGAAGAA
GAGGAAATCCCTTTCCATTTCAAAAAGAAAGAATTTCCATCTTTCCACAT
TGGGAAGAAAGAGTTTCCAGTTTTCCACTTTGGGAAGAAAGATGAAATCC
CTCTCTTCCACAGCAAGAAGACAGTTCTTTATCCAGAAGTTGACGAAAAC
GAAGTGCTGCAAATGCTCAACAGTCTCAGTGACGCCCAATCACCCTACCA
CAGAATTTTCCAAAGACGTGAAGCGAATCCTTTATATGCAAATATTGGAA
GGTACGGTCGTCGCTCGATTCCCCGATTGAATCGATATGGGAAGCGTGCG
GTATTCTTGTCAGATGTAATGGACGAGCGCAAACCTATACCTCTTCAACA
AGCCTTCAACCTTCGATTACCGTTGTACCAGAAACGGGATGGCGCTCTCC
CCTTACCTTACGCTTTCGACAAGAAAAGAGAGTCCACACAACGCTTCGGT
AGAGATTATCTCAAATTGGGGAAAACTAAAAACTCTATGAAAAAAATCGT
CGAGCTGCAATTTACTCCTTTCTCTCGAAGATACGGGAAATAACTTTTAA
TATTCAAATTATTAATTCTAGTATTAAAAGGACAAAGCGCAGTGCGTATT
TTTTATTTTTCAAGGGCAGCATAGATGAGAGATTGACTTTAATCATGACA
AATTTTGTATAATAATAAATACCTATTTGTTGAATTTAGGAAAAAGTTTT
TGCACAATGGAGAAC

Coding sequence (CDS) from alignment at scaffold_124:25047..33911-

>TCONS_00047282 ID=TCONS_00047282|Name=TCONS_00047282|organism=Clytia hemisphaerica|type=CDS|length=981bp|location=Sequence derived from alignment at scaffold_124:25047..33911- (Clytia hemisphaerica)
ATGAAGGTGAAATATTTGGTTCTCCTTTGCTGCTTGTTTGGGCTGACCAG
AACTGCTCCTGCCAAGAAAGAAGATAAATTACCTGTCCGACTGTATGGAG
AAAGTGGCCGCGAGATGAATGAAAAGAAAGAGGCAATGCACTCAGGAAAG
GATAGTGTTGCTGAAAAAGAAGAAGGAAAATTGAAGGCAAAGAAAGATGC
GGATGAAGATGTTCACAATTTTTTGAAATCTCAATCGTTGCCATTCATGT
TCCAAAAGAAAGATGAAATACCTTTCCATTTCAAGAAAAACACACTGCCG
TTCCTTCACATGAAGAAAGAATCGATTCCGTTCCATTTCCGCAGAGAAAA
CATACCGTTCCATTTCCGCAGAGAAAACATTCCGTTTCATTTCCGCAGAG
AAGCATTGCCGTTCGCATTCAGTCGTTCACTCGAAGAAGAGGAAATCCCT
TTCCATTTCAAAAAGAAAGAATTTCCATCTTTCCACATTGGGAAGAAAGA
GTTTCCAGTTTTCCACTTTGGGAAGAAAGATGAAATCCCTCTCTTCCACA
GCAAGAAGACAGTTCTTTATCCAGAAGTTGACGAAAACGAAGTGCTGCAA
ATGCTCAACAGTCTCAGTGACGCCCAATCACCCTACCACAGAATTTTCCA
AAGACGTGAAGCGAATCCTTTATATGCAAATATTGGAAGGTACGGTCGTC
GCTCGATTCCCCGATTGAATCGATATGGGAAGCGTGCGGTATTCTTGTCA
GATGTAATGGACGAGCGCAAACCTATACCTCTTCAACAAGCCTTCAACCT
TCGATTACCGTTGTACCAGAAACGGGATGGCGCTCTCCCCTTACCTTACG
CTTTCGACAAGAAAAGAGAGTCCACACAACGCTTCGGTAGAGATTATCTC
AAATTGGGGAAAACTAAAAACTCTATGAAAAAAATCGTCGAGCTGCAATT
TACTCCTTTCTCTCGAAGATACGGGAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030120XLOC_030120Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047282-exon-scaffold_124-1575043694:33850..33911TCONS_00047282-exon-scaffold_124-1575043694:33850..33911Clytia hemisphaericaexon
TCONS_00047282-exon-scaffold_124-1575043694:32930..32975TCONS_00047282-exon-scaffold_124-1575043694:32930..32975Clytia hemisphaericaexon
TCONS_00047282-exon-scaffold_124-1575043694:32566..32650TCONS_00047282-exon-scaffold_124-1575043694:32566..32650Clytia hemisphaericaexon
TCONS_00047282-exon-scaffold_124-1575043694:31821..31955TCONS_00047282-exon-scaffold_124-1575043694:31821..31955Clytia hemisphaericaexon
TCONS_00047282-exon-scaffold_124-1575043694:31544..31630TCONS_00047282-exon-scaffold_124-1575043694:31544..31630Clytia hemisphaericaexon
TCONS_00047282-exon-scaffold_124-1575043694:30491..30640TCONS_00047282-exon-scaffold_124-1575043694:30491..30640Clytia hemisphaericaexon
TCONS_00047282-exon-scaffold_124-1575043694:25047..26219TCONS_00047282-exon-scaffold_124-1575043694:25047..26219Clytia hemisphaericaexon
TCONS_00047282-exon-scaffold_124-1510915933:33850..33911TCONS_00047282-exon-scaffold_124-1510915933:33850..33911Clytia hemisphaericaexon
TCONS_00047282-exon-scaffold_124-1510915933:32930..32975TCONS_00047282-exon-scaffold_124-1510915933:32930..32975Clytia hemisphaericaexon
TCONS_00047282-exon-scaffold_124-1510915933:32566..32650TCONS_00047282-exon-scaffold_124-1510915933:32566..32650Clytia hemisphaericaexon
TCONS_00047282-exon-scaffold_124-1510915933:31821..31955TCONS_00047282-exon-scaffold_124-1510915933:31821..31955Clytia hemisphaericaexon
TCONS_00047282-exon-scaffold_124-1510915933:31544..31630TCONS_00047282-exon-scaffold_124-1510915933:31544..31630Clytia hemisphaericaexon
TCONS_00047282-exon-scaffold_124-1510915933:30491..30640TCONS_00047282-exon-scaffold_124-1510915933:30491..30640Clytia hemisphaericaexon
TCONS_00047282-exon-scaffold_124-1510915933:25047..26219TCONS_00047282-exon-scaffold_124-1510915933:25047..26219Clytia hemisphaericaexon
TCONS_00047282-exon-scaffold_124-1491911889:33850..33911TCONS_00047282-exon-scaffold_124-1491911889:33850..33911Clytia hemisphaericaexon
TCONS_00047282-exon-scaffold_124-1491911889:32930..32975TCONS_00047282-exon-scaffold_124-1491911889:32930..32975Clytia hemisphaericaexon
TCONS_00047282-exon-scaffold_124-1491911889:32566..32650TCONS_00047282-exon-scaffold_124-1491911889:32566..32650Clytia hemisphaericaexon
TCONS_00047282-exon-scaffold_124-1491911889:31821..31955TCONS_00047282-exon-scaffold_124-1491911889:31821..31955Clytia hemisphaericaexon
TCONS_00047282-exon-scaffold_124-1491911889:31544..31630TCONS_00047282-exon-scaffold_124-1491911889:31544..31630Clytia hemisphaericaexon
TCONS_00047282-exon-scaffold_124-1491911889:30491..30640TCONS_00047282-exon-scaffold_124-1491911889:30491..30640Clytia hemisphaericaexon
TCONS_00047282-exon-scaffold_124-1491911889:25047..26219TCONS_00047282-exon-scaffold_124-1491911889:25047..26219Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047282-proteinTCONS_00047282-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_124supercontigscaffold_124:25047..33911 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.25249	3.19967	0.961543	0.512948	1.20976	0.815973	1.90787	1.83332	2.2987	1.70249	3.68303	3.11856	2.58761	2.38441	3.32924	3.796	4.42432	4.96923	1.61445	3.22307	12.4779	10.4954	7.41491	9.50923	18.4216	20.5674	1.1772	1.10037	2.85734	3.2922
Blast
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BLAST of TCONS_00047282 vs. Swiss-Prot (Human)
Match: ATP23 (Mitochondrial inner membrane protease ATP23 homolog OS=Homo sapiens GN=ATP23 PE=1 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 4.697e-44
Identity = 81/176 (46.02%), Postives = 112/176 (63.64%), Query Frame = 2 
Query:   23 QKCTRFAERSCKANRQVKFLLQCLKSKGCEVSLESEGIVCERCEDQLLGGFDPSAKQVVLCQNNLKTQADIDRILSHELIHAFDVCTVKYD-VNDTRHLACSEVRASTLSGECSFSREMFNYFPFKIRRQYQECVKRKATNSICASKHLDRDEARKLVEEVFHSCFYDHSPFKEIP 547
            QKC     ++ + N  VK LL  +K  GC V+ +     CE C   + GGFD S  Q+VLCQNN+  QA ++R+++HELIHAFD C    D   + RHLACSEVRA+ LSG+CS   E+F    F +++ +Q CV+ +AT SI A +++ ++ A+K V+EVF SCF DH PF  IP
Sbjct:   50 QKCQLRLLKTLETNPYVKLLLDAMKHSGCAVNKDRH-FSCEDCNGNVSGGFDASTSQIVLCQNNIHNQAHMNRVVTHELIHAFDHCRAHVDWFTNIRHLACSEVRAANLSGDCSLVNEIFR-LHFGLKQHHQTCVRDRATLSILAVRNISKEVAKKAVDEVFESCFNDHEPFGRIP 223
The following BLAST results are available for this feature:
BLAST of TCONS_00047282 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ATP234.697e-4446.02Mitochondrial inner membrane protease ATP23 homolo... [more]
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