TCONS_00047328 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047328
Unique NameTCONS_00047328
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2399

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047328 ID=TCONS_00047328|Name=TCONS_00047328|organism=Clytia hemisphaerica|type=transcript|length=2399bp
gaaaaatattgaagatttttttcgaataaaaagACTTGAAAAATACTACA
ACTATAAAGATTATGTTTGGAAATCATTTTGGGAGACGGAAATCATTCCA
CCGACACCCTTCGGAAGCCAACCTACCCTCATGTATCATTCATGATAATC
ATTATGTTAATTGGTACGATAATCGATACAATAATTATTCCAGAGATTTT
TGGGGTTTCGACCATGGACCATTGACTGCTTTTACCTGCTCATTCTCATC
TAATAACTCTAACATCTATAATGTGTGTTTTGCCCTGGAGGAGCAAGTAT
CATCATACAATGCTAGTAATTCAACAGGATTCGAATCTGTGGCTGCTTTT
TATGAATATGATGGTATAAAGGAAGAACCTAAGAAACGTAAAAAGGAGAA
GAAGGTTGATGAAGATGCTTGGAAACTGAACCCCATTGTTCAGGCAATAA
TGAAAAGAGATGAGGAACAAGCAGCCGCGAATCCCAAGGCCATTGAAGTA
GTTTCTGATGGCGATTCCTGGAGTACTGTAGAAGAAGAAACAGTTTGCTC
TTCTGGTGTAGGGGATGATGATAAATTTGATGAATTTGTTGGTGAAATTA
AAGAACTTAACAGCTTTGGTGATAAATCAAATGACATTGACAATTATCCA
ACAGATGGATATAGGAGTGGTGGTGGTGTttctcttgggattggtttgaA
TGATGATATTGAATGTCAATTGTTAGATTCAGATAGTAGTTCTGATGAAA
ATGTGGACACTGAAACTAAGAAAACCGAAAGAAAAGATACTGCATCTAGA
TTTATTAACGGTATCAATTTAGATACGTATGATGTCGATTCTGGTAAAAT
TTTCAGTAGTGTATCCTGTGATATTTATCAGAGAGATTTGGATGCCAATG
CTTCTGAATCCAATTCTGGAGATTCTGACATCATTGAAATGGGTTGTTTT
GGTAAAAATGATAACATTGACTATGAACAGAGTACAACTGCTAAGAAAAG
GCGGATTTGTTTCAGTAATGGTGAAGCCAAATATGAATCTGATGATGAGA
TAAATGTAGTTAATTGCAGATGTAATGGTAAAAACTATAAACAACTTAAT
GTTTCCAACAAAGTTAAACCTGGTGACCAGGAAATTGGAGATTCTCCCGG
AAACAATTCCAATGAACAGGAACTTTCAAACAAATCCTACGTTGATGAAA
TGAATTATAATGGTATTGGTGATATTGATAATACCGATGAAGAAGACAGT
TTCGATgaggaaaacgaaagtgaaagtgaagagCCAGAAGAAGAATCTGA
TGATTGGGAAAATATGGATATGGATACATATTGCAAAAGGATCATGGGTG
ATTTGATATACCCTGTCACTGTATTTATTGATAACACACCACTTCCTTTA
CCACGATTTTCTAAATGTCAACGTTTTTTTACTGTACTGAAAGCCAAGAC
AATCGATGGATTGAAATGTAttaaaatgcttgaaaaagACCGTTTGGAAG
ATGGGAAAGATGCATCGGTTGAGACTTTTGTGTTGCCTTGTAAAGGTGAA
GGTTTTGTAACCCAGAATGATGTTTGTATGTTGGCTATAGGTGACTTATA
TGCAGTTACTGCCAGGCGAAATGTACATACTAATGATACTTTAGTGTTTT
GGAAAGTAGCCCTCAAAAGATGGACCAAGGATGAAATGTATTTGAAATAT
TACTGGACGTTGGAACCAAATGATTATTTTTCTTCATCTGATTTTGGTGC
ATCGAATCGCCTTCAAGTGATTGATTATGAGTTTTCATCTAACGGGCAAT
GCATTACTTTATTGATGCAAAATGGTTTCATTTTCACTGTTGATATTCAA
AGAAAACATCAGGTCTGGCAAGTGTACCTACCACCAGGTGGCGATCGAAT
GGTCAAACAACTTACCTTACATCCAACATTGAACGCTACATTAGTATTTG
CAATGAAAAACGAATGTTATTCACTGGATTGTAGCTCCAAATCACAATCA
TGGGATATGATTCAATCAGTCATTGAATTACCAAGAGATTACATCATCAA
TTACATCACCTTTTCTCAAAGTAGAGATCTACTATCCCTCTGTACTGGCC
CTGAAGGAGACGTGTTCATTTATTCAGTAGATAAACACCAATATAATCAA
CTTTTTAAACTTGAACATGATACAGTGGCATCTGCAATACACTGTGATTT
TTCATGGACGTCTGAAGAACTTTTAGTGTCTTATGGTGATGCTGACTATC
GAATCTGGCAATTGCCAAAGCATCTTAAGTTGAAAAAGATTGCTAGAATT
CAATTCCTAAAATTAGTTCGTGGTTGTCATATAAACCAGTTGAAATTACC
AAATTCATTGAAAgaatatttactattttaagTATCTTTTACAATAACG
Run BLAST on NCBI

protein sequence of TCONS_00047328-protein

>TCONS_00047328-protein ID=TCONS_00047328-protein|Name=TCONS_00047328-protein|organism=Clytia hemisphaerica|type=polypeptide|length=772bp
MFGNHFGRRKSFHRHPSEANLPSCIIHDNHYVNWYDNRYNNYSRDFWGFD
HGPLTAFTCSFSSNNSNIYNVCFALEEQVSSYNASNSTGFESVAAFYEYD
GIKEEPKKRKKEKKVDEDAWKLNPIVQAIMKRDEEQAAANPKAIEVVSDG
DSWSTVEEETVCSSGVGDDDKFDEFVGEIKELNSFGDKSNDIDNYPTDGY
RSGGGVSLGIGLNDDIECQLLDSDSSSDENVDTETKKTERKDTASRFING
INLDTYDVDSGKIFSSVSCDIYQRDLDANASESNSGDSDIIEMGCFGKND
NIDYEQSTTAKKRRICFSNGEAKYESDDEINVVNCRCNGKNYKQLNVSNK
VKPGDQEIGDSPGNNSNEQELSNKSYVDEMNYNGIGDIDNTDEEDSFDEE
NESESEEPEEESDDWENMDMDTYCKRIMGDLIYPVTVFIDNTPLPLPRFS
KCQRFFTVLKAKTIDGLKCIKMLEKDRLEDGKDASVETFVLPCKGEGFVT
QNDVCMLAIGDLYAVTARRNVHTNDTLVFWKVALKRWTKDEMYLKYYWTL
EPNDYFSSSDFGASNRLQVIDYEFSSNGQCITLLMQNGFIFTVDIQRKHQ
VWQVYLPPGGDRMVKQLTLHPTLNATLVFAMKNECYSLDCSSKSQSWDMI
QSVIELPRDYIINYITFSQSRDLLSLCTGPEGDVFIYSVDKHQYNQLFKL
EHDTVASAIHCDFSWTSEELLVSYGDADYRIWQLPKHLKLKKIARIQFLK
LVRGCHINQLKLPNSLKEYLLF
Run BLAST on NCBI

transcript from alignment at scaffold_126:132326..135091+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047328 ID=TCONS_00047328|Name=TCONS_00047328|organism=Clytia hemisphaerica|type=transcript|length=2766bp|location=Sequence derived from alignment at scaffold_126:132326..135091+ (Clytia hemisphaerica)
gaaaaatattgaagatttttttcgaataaaaagACTTGAAAAATACTACA ACTATAAAGATTATGTTTGGTAAGTTTAATTTGAGTTGTCCCGAAGGGAT CCAAAATTTATATATgtgtgaagaaataagaattttattCACTCAGAAGA TTTGTGTGGCAGAGCAGTTGTATacatttcgtccttattgggACTCATCA GCACACTGCATACTGCACTCTGGCTGGCTAAATCGATTTATCTCTGACGA CCACAAAATCACTTTAGGTTTGAACTGAGACAGTGGACAGTAGGGAAATT CTCTACGTGACTCTTTGCAGACTTACTAAAAGTATATATACACTCTGCAA GAACTTTATGTATGTCTTTACCTTTCAATGTGgcgaaaacaaatttttct gaTGAAGCTTTTTAAATATGATGCTCTGTCTTTTAGGAAATCATTTTGGG AGACGGAAATCATTCCACCGACACCCTTCGGAAGCCAACCTACCCTCATG TATCATTCATGATAATCATTATGTTAATTGGTACGATAATCGATACAATA ATTATTCCAGAGATTTTTGGGGTTTCGACCATGGACCATTGACTGCTTTT ACCTGCTCATTCTCATCTAATAACTCTAACATCTATAATGTGTGTTTTGC CCTGGAGGAGCAAGTATCATCATACAATGCTAGTAATTCAACAGGATTCG AATCTGTGGCTGCTTTTTATGAATATGATGGTATAAAGGAAGAACCTAAG AAACGTAAAAAGGAGAAGAAGGTTGATGAAGATGCTTGGAAACTGAACCC CATTGTTCAGGCAATAATGAAAAGAGATGAGGAACAAGCAGCCGCGAATC CCAAGGCCATTGAAGTAGTTTCTGATGGCGATTCCTGGAGTACTGTAGAA GAAGAAACAGTTTGCTCTTCTGGTGTAGGGGATGATGATAAATTTGATGA ATTTGTTGGTGAAATTAAAGAACTTAACAGCTTTGGTGATAAATCAAATG ACATTGACAATTATCCAACAGATGGATATAGGAGTGGTGGTGGTGTttct cttgggattggtttgaATGATGATATTGAATGTCAATTGTTAGATTCAGA TAGTAGTTCTGATGAAAATGTGGACACTGAAACTAAGAAAACCGAAAGAA AAGATACTGCATCTAGATTTATTAACGGTATCAATTTAGATACGTATGAT GTCGATTCTGGTAAAATTTTCAGTAGTGTATCCTGTGATATTTATCAGAG AGATTTGGATGCCAATGCTTCTGAATCCAATTCTGGAGATTCTGACATCA TTGAAATGGGTTGTTTTGGTAAAAATGATAACATTGACTATGAACAGAGT ACAACTGCTAAGAAAAGGCGGATTTGTTTCAGTAATGGTGAAGCCAAATA TGAATCTGATGATGAGATAAATGTAGTTAATTGCAGATGTAATGGTAAAA ACTATAAACAACTTAATGTTTCCAACAAAGTTAAACCTGGTGACCAGGAA ATTGGAGATTCTCCCGGAAACAATTCCAATGAACAGGAACTTTCAAACAA ATCCTACGTTGATGAAATGAATTATAATGGTATTGGTGATATTGATAATA CCGATGAAGAAGACAGTTTCGATgaggaaaacgaaagtgaaagtgaagag CCAGAAGAAGAATCTGATGATTGGGAAAATATGGATATGGATACATATTG CAAAAGGATCATGGGTGATTTGATATACCCTGTCACTGTATTTATTGATA ACACACCACTTCCTTTACCACGATTTTCTAAATGTCAACGTTTTTTTACT GTACTGAAAGCCAAGACAATCGATGGATTGAAATGTAttaaaatgcttga aaaagACCGTTTGGAAGATGGGAAAGATGCATCGGTTGAGACTTTTGTGT TGCCTTGTAAAGGTGAAGGTTTTGTAACCCAGAATGATGTTTGTATGTTG GCTATAGGTGACTTATATGCAGTTACTGCCAGGCGAAATGTACATACTAA TGATACTTTAGTGTTTTGGAAAGTAGCCCTCAAAAGATGGACCAAGGATG AAATGTATTTGAAATATTACTGGACGTTGGAACCAAATGATTATTTTTCT TCATCTGATTTTGGTGCATCGAATCGCCTTCAAGTGATTGATTATGAGTT TTCATCTAACGGGCAATGCATTACTTTATTGATGCAAAATGGTTTCATTT TCACTGTTGATATTCAAAGAAAACATCAGGTCTGGCAAGTGTACCTACCA CCAGGTGGCGATCGAATGGTCAAACAACTTACCTTACATCCAACATTGAA CGCTACATTAGTATTTGCAATGAAAAACGAATGTTATTCACTGGATTGTA GCTCCAAATCACAATCATGGGATATGATTCAATCAGTCATTGAATTACCA AGAGATTACATCATCAATTACATCACCTTTTCTCAAAGTAGAGATCTACT ATCCCTCTGTACTGGCCCTGAAGGAGACGTGTTCATTTATTCAGTAGATA AACACCAATATAATCAACTTTTTAAACTTGAACATGATACAGTGGCATCT GCAATACACTGTGATTTTTCATGGACGTCTGAAGAACTTTTAGTGTCTTA TGGTGATGCTGACTATCGAATCTGGCAATTGCCAAAGCATCTTAAGTTGA AAAAGATTGCTAGAATTCAATTCCTAAAATTAGTTCGTGGTTGTCATATA AACCAGTTGAAATTACCAAATTCATTGAAAgaatatttactattttaagT ATCTTTTACAATAACG

Coding sequence (CDS) from alignment at scaffold_126:132326..135091+

>TCONS_00047328 ID=TCONS_00047328|Name=TCONS_00047328|organism=Clytia hemisphaerica|type=CDS|length=4638bp|location=Sequence derived from alignment at scaffold_126:132326..135091+ (Clytia hemisphaerica)
ATGTTTGGAAATCATTTTGGGAGACGGAAATCATTCCACCGACACCCTTC
GGAAGCCAACCTACCCTCATGTATCATTCATGATAATCATTATGTTAATT
GGTACGATAATCGATACAATAATTATTCCAGAGATTTTTGGGGTTTCGAC
CATGGACCATTGACTGCTTTTACCTGCTCATTCTCATCTAATAACTCTAA
CATCTATAATGTGTGTTTTGCCCTGGAGGAGCAAGTATCATCATACAATG
CTAGTAATTCAACAGGATTCGAATCTGTGGCTGCTTTTTATGAATATGAT
GGTATAAAGGAAGAACCTAAGAAACGTAAAAAGGAGAAGAAGGTTGATGA
AGATGCTTGGAAACTGAACCCCATTGTTCAGGCAATAATGAAAAGAGATG
AGGAACAAGCAGCCGCGAATCCCAAGGCCATTGAAGTAGTTTCTGATGGC
GATTCCTGGAGTACTGTAGAAGAAGAAACAGTTTGCTCTTCTGGTGTAGG
GGATGATGATAAATTTGATGAATTTGTTGGTGAAATTAAAGAACTTAACA
GCTTTGGTGATAAATCAAATGACATTGACAATTATCCAACAGATGGATAT
AGGAGTGGTGGTGGTGTttctcttgggattggtttgaATGATGATATTGA
ATGTCAATTGTTAGATTCAGATAGTAGTTCTGATGAAAATGTGGACACTG
AAACTAAGAAAACCGAAAGAAAAGATACTGCATCTAGATTTATTAACGGT
ATCAATTTAGATACGTATGATGTCGATTCTGGTAAAATTTTCAGTAGTGT
ATCCTGTGATATTTATCAGAGAGATTTGGATGCCAATGCTTCTGAATCCA
ATTCTGGAGATTCTGACATCATTGAAATGGGTTGTTTTGGTAAAAATGAT
AACATTGACTATGAACAGAGTACAACTGCTAAGAAAAGGCGGATTTGTTT
CAGTAATGGTGAAGCCAAATATGAATCTGATGATGAGATAAATGTAGTTA
ATTGCAGATGTAATGGTAAAAACTATAAACAACTTAATGTTTCCAACAAA
GTTAAACCTGGTGACCAGGAAATTGGAGATTCTCCCGGAAACAATTCCAA
TGAACAGGAACTTTCAAACAAATCCTACGTTGATGAAATGAATTATAATG
GTATTGGTGATATTGATAATACCGATGAAGAAGACAGTTTCGATgaggaa
aacgaaagtgaaagtgaagagCCAGAAGAAGAATCTGATGATTGGGAAAA
TATGGATATGGATACATATTGCAAAAGGATCATGGGTGATTTGATATACC
CTGTCACTGTATTTATTGATAACACACCACTTCCTTTACCACGATTTTCT
AAATGTCAACGTTTTTTTACTGTACTGAAAGCCAAGACAATCGATGGATT
GAAATGTAttaaaatgcttgaaaaagACCGTTTGGAAGATGGGAAAGATG
CATCGGTTGAGACTTTTGTGTTGCCTTGTAAAGGTGAAGGTTTTGTAACC
CAGAATGATGTTTGTATGTTGGCTATAGGTGACTTATATGCAGTTACTGC
CAGGCGAAATGTACATACTAATGATACTTTAGTGTTTTGGAAAGTAGCCC
TCAAAAGATGGACCAAGGATGAAATGTATTTGAAATATTACTGGACGTTG
GAACCAAATGATTATTTTTCTTCATCTGATTTTGGTGCATCGAATCGCCT
TCAAGTGATTGATTATGAGTTTTCATCTAACGGGCAATGCATTACTTTAT
TGATGCAAAATGGTTTCATTTTCACTGTTGATATTCAAAGAAAACATCAG
GTCTGGCAAGTGTACCTACCACCAGGTGGCGATCGAATGGTCAAACAACT
TACCTTACATCCAACATTGAACGCTACATTAGTATTTGCAATGAAAAACG
AATGTTATTCACTGGATTGTAGCTCCAAATCACAATCATGGGATATGATT
CAATCAGTCATTGAATTACCAAGAGATTACATCATCAATTACATCACCTT
TTCTCAAAGTAGAGATCTACTATCCCTCTGTACTGGCCCTGAAGGAGACG
TGTTCATTTATTCAGTAGATAAACACCAATATAATCAACTTTTTAAACTT
GAACATGATACAGTGGCATCTGCAATACACTGTGATTTTTCATGGACGTC
TGAAGAACTTTTAGTGTCTTATGGTGATGCTGACTATCGAATCTGGCAAT
TGCCAAAGCATCTTAAGTTGAAAAAGATTGCTAGAATTCAATTCCTAAAA
TTAGTTCGTGGTTGTCATATAAACCAGTTGAAATTACCAAATTCATTGAA
AgaatatttactattttaaATGTTTGGAAATCATTTTGGGAGACGGAAAT
CATTCCACCGACACCCTTCGGAAGCCAACCTACCCTCATGTATCATTCAT
GATAATCATTATGTTAATTGGTACGATAATCGATACAATAATTATTCCAG
AGATTTTTGGGGTTTCGACCATGGACCATTGACTGCTTTTACCTGCTCAT
TCTCATCTAATAACTCTAACATCTATAATGTGTGTTTTGCCCTGGAGGAG
CAAGTATCATCATACAATGCTAGTAATTCAACAGGATTCGAATCTGTGGC
TGCTTTTTATGAATATGATGGTATAAAGGAAGAACCTAAGAAACGTAAAA
AGGAGAAGAAGGTTGATGAAGATGCTTGGAAACTGAACCCCATTGTTCAG
GCAATAATGAAAAGAGATGAGGAACAAGCAGCCGCGAATCCCAAGGCCAT
TGAAGTAGTTTCTGATGGCGATTCCTGGAGTACTGTAGAAGAAGAAACAG
TTTGCTCTTCTGGTGTAGGGGATGATGATAAATTTGATGAATTTGTTGGT
GAAATTAAAGAACTTAACAGCTTTGGTGATAAATCAAATGACATTGACAA
TTATCCAACAGATGGATATAGGAGTGGTGGTGGTGTttctcttgggattg
gtttgaATGATGATATTGAATGTCAATTGTTAGATTCAGATAGTAGTTCT
GATGAAAATGTGGACACTGAAACTAAGAAAACCGAAAGAAAAGATACTGC
ATCTAGATTTATTAACGGTATCAATTTAGATACGTATGATGTCGATTCTG
GTAAAATTTTCAGTAGTGTATCCTGTGATATTTATCAGAGAGATTTGGAT
GCCAATGCTTCTGAATCCAATTCTGGAGATTCTGACATCATTGAAATGGG
TTGTTTTGGTAAAAATGATAACATTGACTATGAACAGAGTACAACTGCTA
AGAAAAGGCGGATTTGTTTCAGTAATGGTGAAGCCAAATATGAATCTGAT
GATGAGATAAATGTAGTTAATTGCAGATGTAATGGTAAAAACTATAAACA
ACTTAATGTTTCCAACAAAGTTAAACCTGGTGACCAGGAAATTGGAGATT
CTCCCGGAAACAATTCCAATGAACAGGAACTTTCAAACAAATCCTACGTT
GATGAAATGAATTATAATGGTATTGGTGATATTGATAATACCGATGAAGA
AGACAGTTTCGATgaggaaaacgaaagtgaaagtgaagagCCAGAAGAAG
AATCTGATGATTGGGAAAATATGGATATGGATACATATTGCAAAAGGATC
ATGGGTGATTTGATATACCCTGTCACTGTATTTATTGATAACACACCACT
TCCTTTACCACGATTTTCTAAATGTCAACGTTTTTTTACTGTACTGAAAG
CCAAGACAATCGATGGATTGAAATGTAttaaaatgcttgaaaaagACCGT
TTGGAAGATGGGAAAGATGCATCGGTTGAGACTTTTGTGTTGCCTTGTAA
AGGTGAAGGTTTTGTAACCCAGAATGATGTTTGTATGTTGGCTATAGGTG
ACTTATATGCAGTTACTGCCAGGCGAAATGTACATACTAATGATACTTTA
GTGTTTTGGAAAGTAGCCCTCAAAAGATGGACCAAGGATGAAATGTATTT
GAAATATTACTGGACGTTGGAACCAAATGATTATTTTTCTTCATCTGATT
TTGGTGCATCGAATCGCCTTCAAGTGATTGATTATGAGTTTTCATCTAAC
GGGCAATGCATTACTTTATTGATGCAAAATGGTTTCATTTTCACTGTTGA
TATTCAAAGAAAACATCAGGTCTGGCAAGTGTACCTACCACCAGGTGGCG
ATCGAATGGTCAAACAACTTACCTTACATCCAACATTGAACGCTACATTA
GTATTTGCAATGAAAAACGAATGTTATTCACTGGATTGTAGCTCCAAATC
ACAATCATGGGATATGATTCAATCAGTCATTGAATTACCAAGAGATTACA
TCATCAATTACATCACCTTTTCTCAAAGTAGAGATCTACTATCCCTCTGT
ACTGGCCCTGAAGGAGACGTGTTCATTTATTCAGTAGATAAACACCAATA
TAATCAACTTTTTAAACTTGAACATGATACAGTGGCATCTGCAATACACT
GTGATTTTTCATGGACGTCTGAAGAACTTTTAGTGTCTTATGGTGATGCT
GACTATCGAATCTGGCAATTGCCAAAGCATCTTAAGTTGAAAAAGATTGC
TAGAATTCAATTCCTAAAATTAGTTCGTGGTTGTCATATAAACCAGTTGA
AATTACCAAATTCATTGAAAgaatatttactattttaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030151XLOC_030151Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047328-proteinTCONS_00047328-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047328-exon-scaffold_126-1491911889:132326..132394TCONS_00047328-exon-scaffold_126-1491911889:132326..132394Clytia hemisphaericaexon
TCONS_00047328-exon-scaffold_126-1510915933:132326..132394TCONS_00047328-exon-scaffold_126-1510915933:132326..132394Clytia hemisphaericaexon
TCONS_00047328-exon-scaffold_126-1575043694:132326..132394TCONS_00047328-exon-scaffold_126-1575043694:132326..132394Clytia hemisphaericaexon
TCONS_00047328-exon-scaffold_126-1491911889:132762..135091TCONS_00047328-exon-scaffold_126-1491911889:132762..135091Clytia hemisphaericaexon
TCONS_00047328-exon-scaffold_126-1510915933:132762..135091TCONS_00047328-exon-scaffold_126-1510915933:132762..135091Clytia hemisphaericaexon
TCONS_00047328-exon-scaffold_126-1575043694:132762..135091TCONS_00047328-exon-scaffold_126-1575043694:132762..135091Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_126supercontigscaffold_126:132326..135091 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.34898 3.01731 2.73301 2.11752 2.88373 2.31329 3.06164 3.43173 2.26612 1.60639 1.39508 1.18679 1.6592 1.24197 1.89496 1.85589 2.38359 2.35585 0.723275 1.02716 1.84823 1.85648 4.99653 4.72833 2.46982 4.03596 1.44386 1.0668 3.77593 3.95699
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047328 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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