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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047330 ID=TCONS_00047330|Name=TCONS_00047330|organism=Clytia hemisphaerica|type=transcript|length=2959bp
AGTCGATGGTCTTTTGCTTTATcattcgggtctgtaaaatactacAATGT
AAAGAAAACAACATTCGAAATTGAAAATGGAAACACTTTTATTTATGCGA
TGTTTGCACTGCACCGCCTTTGCTCCTCAACAGACAGAAAACAAAACTTG
GGACGTTTTatgaaaagatattaaattatGACACTGTGTACACAAAAATA
ATGGAGTGTCTCTATTGTAtgttacttttattttaaaaatcacagAGGGG
GCTTCTTTCTCTGCAACTAGAATCTGATCTTTAGACATGCTCTCACTTTT
TTCTGATCTCtaaagttttgtttacaaacattttttaattataaTATTGT
CTTTACAAAAAATGTTATGTACAACAGCTCAGTTCAATCAGTATGTCCTA
tcttgttttgtgtttgtttacAGACAATCTCTTTCCACTCTTTTAGAGGT
TTTAAAGTATATATAAAATGGCAAAAGTAAGAAATAAGAACTTCCTgaca
gaagaagaaaaagatttatttgATGGATTGACTGCAGATGAAATTGCTGA
GTTCAACCAAGATCTTGATGAAAAAGATgaaGATTTATTGCCTGCAGGAC
TTCGTGGAGAGGACCAAACAACCAAAGATCCTACTGGACCGTTTGATCGT
GAAAAATTGATGACATATTTGAAGGATGAGGCAGTATCGCAGCCTGATCT
GCAAGATCCACATTATGTaccttttgaaaagaaaacgagaggaagagttt
tcaaaaagaaagaaaaatcaaagactACAACCCCTTTATTGCCAGACGAT
CTAAGTGATGTTTTGGACGCAGCATCTGAGGATGATTTATTAGAATTAGC
AGCTGTTTTGGGTATTCATGGTATGCTGACACAAAAACAAAGTGAAACAG
CTGATGAAGATAAAACATGGGACTCCTTAAAAGGATCTGGACTTAGGAAA
TACAAAGGCGGTATCACCAAAGCCACCAAGGTCAAAGAATACACAGACAA
CGAGGCAGTCAATGAGTTGGACATGGAAGAAGCATTGGCTAAGCTGAAAG
CCGGTGATGAAACACTGGAAGAGTTGAATCTGAACAATCACCAAGAGGTC
ACCGAAGATATTCTAATGGATATTGTAGAGCATCTGAAAAATAACACTTC
TCTGAAGAAATTACATTTAGCAAACACACAAATGAAAGATCATATAGGCG
AGGAACTTGCAGAAGCTCTGAAATCAAACACCACTCTGgagattttgaat
ttagaaTCCAACTTTTTGAAAGCCGAATCCGTGATGGCTCTTCTTAAAGT
GATAGAAGTAAACGAATCATTGAAAGAATTGAAACTAGCCAACCAGtacA
ATAAAATTGGACACAAAGCAGAACAAGCAATGGCAAAATCGTTGGCTAAA
AACACGACGATTCTGAGGTTCGGTTACAATTTCGATTCGAGGGGACCAAG
ACACACATGTAACAAATACGTCATGAGAAATAATGATATAGaccgaCAGA
AGAGGCAAGAGGCGAAAAGACAGAATGGAAACTGAGACGATTGAACTGGT
ATAAAgctttcaagtttttgtttttgtttgaaatggaGATTTTTATTTCC
CCTCAAAACATCggtggaaaaaaagaaaaataactttcaaGAACTGCTTT
AAATTATTGAATGGATTATGTCCTAcagtgaaaaaaagaaaaatatatct
aGCTAAGAGGTCTATAATTATGGAATTGAGAATTGGCGATCCCAGAGTAT
CTgctctttcctttaaaaatctgaaacacGACTTAATCAGGTTATACGAA
ACATCCCTTACCCATCGAAAACTgtaaaaatgaatttatttttaaaaccg
AGCGATTCAATTAATTGTTTTGGAATTGTTTAtagaaattattattatta
ttattgttggAATTTAAAACACTTTGCTTGATTTTGATTGGATGAAAATT
TGGACTGTGGTACGGAGCTATTTTACCCGGCTTgaagttttaaaatttca
ttgaaagttAAAATCCTGAtttctttgtatattttttaagcttttaaaGC
TGTGAAAATCAGTTCCTTCGAGTTTATTGTTTTCATCTTATCAGAATAAg
cccaaattcttatttttcatttcttaatGCGAATATTTAACAAGGAGATA
AACGCTGAATGTCACATTTGATCTTCAAGAAAAttcgaagtttttttaaa
tgttaaGCAATTCTCTTTGTTTTTGTACTGGAATTGATAAAGTAGAAATG
GAATTTAGAATGATTTTAGGTTATTTTAGTTATTTTAgacaaattgaaat
taaaatgcaATTGAACGtagattttttctttaattttcagaGATAAAATA
TCAGTGTTACatttattttgagcaattttgatttttcctctttattataa
attcattttAAAGCATCGTGATTTATTTCACTTGTATATTTCTTAGTTGT
AGTGTAGAGGGtgctttaattttttcaattgtttAGGCCTAGATTATATT
GACCGATATTGATTTGCTATTACACcttagaattttttaattttagtatC
TAATGACTTTGAAGGGATAAGTTGAAACAGGTTGAAAAAGTTCAAGTAGA
ATAATTCTATTTCGAAACAAATGGAATATTTCCTTATATTTCTTGTTTTT
ACCAACTAAATCTCAACTCTTCTATTCCTCTTAATTTCAAGAACCTAAAT
TATTGTTATAAACATATAATATACATTTGAAATTAAAAccattttttaat
tcattttcggTTGTGAAACGAAAAATTCGTAACTTAATTTTAGATTGCGT
CACAAGTTGTTTAGcggtaaaaaatgaattttattaggagagatttatta
tttatcaaagaaagtaaaaaatataattttaatttttttatcgttttttt
gtgtttttgtatgtacaaaacaaaatataaaatatacccACTTTATTTTt
cgttaaaaa Run BLAST on NCBI protein sequence of TCONS_00047330-protein >TCONS_00047330-protein ID=TCONS_00047330-protein|Name=TCONS_00047330-protein|organism=Clytia hemisphaerica|type=polypeptide|length=355bp
MAKVRNKNFLTEEEKDLFDGLTADEIAEFNQDLDEKDEDLLPAGLRGEDQ
TTKDPTGPFDREKLMTYLKDEAVSQPDLQDPHYVPFEKKTRGRVFKKKEK
SKTTTPLLPDDLSDVLDAASEDDLLELAAVLGIHGMLTQKQSETADEDKT
WDSLKGSGLRKYKGGITKATKVKEYTDNEAVNELDMEEALAKLKAGDETL
EELNLNNHQEVTEDILMDIVEHLKNNTSLKKLHLANTQMKDHIGEELAEA
LKSNTTLEILNLESNFLKAESVMALLKVIEVNESLKELKLANQYNKIGHK
AEQAMAKSLAKNTTILRFGYNFDSRGPRHTCNKYVMRNNDIDRQKRQEAK
RQNGN Run BLAST on NCBI transcript from alignment at scaffold_126:161655..171090+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047330 ID=TCONS_00047330|Name=TCONS_00047330|organism=Clytia hemisphaerica|type=transcript|length=9436bp|location=Sequence derived from alignment at scaffold_126:161655..171090+ (Clytia hemisphaerica)
AGTCGATGGTCTTTTGCTTTATcattcgggtctgtaaaatactacAATGT
AAAGAAAACAACATTCGAAATTGAAAATGGAAACACTTTTATTTATGCGA
TGTTTGCACTGCACCGCCTTTGCTCCTCAACAGACAGAAAACAAAACTTG
GGACGTTTTatgaaaagatattaaattatGACACTGTGTACACAAAAATA
ATGGAGTGTCTCTATTGTAtgttacttttattttaaaaatcacagAGGGG
GCTTCTTTCTCTGCAACTAGAATCTGATCTTTAGACATGCTCTCACTTTT
TTCTGATCTCtaaagttttgtttacaaacattttttaattataaTATTGT
CTTTACAAAAAATGTTATGTACAACAGCTCAGTTCAATCAGTATGTCCTA
tcttgttttgtgtttgtttacAGACAATCTCTTTCCACTCTTTTAGAGGT
TTTAAAGTATATATAAAATGGCAAAAGTAAGAAATAAGAACTTCCTgaca
gaagaagaaaaagatttatttgATGGATTGACTGCAGATGAAATTGCTGA
GTTCAACCAAGATCTTGATGAAAAAGATGTAAGTTAATGACTTTCTTAAA
TCTTTATTTTATGTTTAGTTTTGTGTacagtaccgtgagtggtctaAACA
TATCAGTTCAGGAAATTGCTGAAAATGACAGTGCAGCAAGAATTCTGCAA
CTTTAGCGTTGTCATATTCTGCAATGTTGTCGAATATCGCAGCTTTTCTG
CTGTGAAATTTGACAACGATTGTCCTTTGAAAACCAAGAGAACAGGGTTG
CAGGAGGACCTTGTCGACGCACCAGACTGTCCGGTATATTTGTCcagtgg
caaaaagtatcctttcactacaccggacgcaataagtccggtgtcagtcc
ggtgttgcatacagggaattttggatgccggacatttatgaaacaaaaaa
ttaagaaaCACCGGACGCaccggactggtcatgtccggtgttctgattgt
ccggtgggaaaaaatatccttctctgacaccggacatccgacttccttaa
gtccagtgtagaaattgtccggtggtaaaaaagattctcattttacaccg
gactttcgcgtgtccggtgttcgttaagtccggtgcgtccgtaGGGTCCT
GTTGCAGAGTGACGAAAGGGGTCCCAAAATCATGTGCATTTTGTAGAACA
ATCTGAAAGTAAACTTTtcactgctctaacttgggacggcaattcggcca
ccatttcaccgaacctccaaagtcatttgatttgagttaatgcaGGTTAA
TGAACtgcatatttaaaaaaacacgatttctctttcgcaccgagtagact
tttaaaatcgaaatatgaaaaaaagatcTGTAGTGGCAGGTAGTGGAAAA
CACGCAaatgtctggaacaaagaagaccaaattagtggcaaaacgatgga
gcatttgacgtcactcgcgcagcaagttacacactcgttatttgttaatt
cCATCGGGTGATAGACAGTTAGGCGGCAGttgttctctaattctccaatc
ggtgTCTGGTCATTtggaataaaaacaaaaaagttaaaaagggcgcacta
tcaatgaaagttattgtggcatgttatgacagaaagaatgattgataaac
ttggtggagttatcaaaacaaacttgttgccaaagagatttaacagtgaa
aatacaggccagatatcaacagtcccatgtttcgaccaatcgtcccaagt
tagagcagttgacggtaaagaTTATTAAAATCATTAAGAGAGTtatttat
tattgttattattattattattattatttttatttattattagtTTATTT
AGTAATGCAGGTTAAAAAAAGGCAGTACAAGACTGATGTGGACCTACTAT
CTTACTACTTGCTATTACCTACTGCTTAAAATTTTACTATACAAGAGAAT
ACTAGGAGAACCCACTAAAATGCAAATCTTAAGATTAGTAGAGCTTAGTT
AGGGCCTCAATCATCCTTCTGTTATGctttaaatcaatcaattcaaTTTT
CCAATGATCATATTTTAGTAAAGTACATTTTAAAGAGTTCACTGCAAGAG
ACAAGACTGATTCCCCTACCCTACACACGTTTTTTAGCAAATGAGGCTCA
ACATTTTGTGAGAATTGAAAATGGTTGACCGAGGAATGTAAAATTTAGAA
CTTGTTGGAacactcattttgttttgttcacaTTACTGCTTTGGATGGTC
TGGGGCTAGATGATTGATACCATGCTTATGAAAGTAACCCcatttaatga
aaatggaaaaataaattcttaaaaataagatgatttaacttgaaaatttt
taggaaGATTTATTGCCTGCAGGACTTCGTGGAGAGGACCAAACAACCAA
AGATCCTACTGGACCGTTTGATCGTGAAAAATTGATGACATATTTGAAGG
ATGAGGCAGTATCGCAGCCTGATCTGCAAGATCCACATTATGTacctttt
gaaaagaaaacgagaggaagagttttcaaaaagaaagaaaaatcaaagac
tACAACCCCTTTATTGCCAGACGATCTAAGTGATGTTTTGGACGCAGCAT
CTGAGGATGATTTATTAGAATTAGCAGGTATGCTTTTAGTATTATTTAAA
TGCAACAGAAATTTTCTTCATACACAGCACCGATTCTAGGGTCAGATCTG
GAAGTTATATTTTAAAACTCCACCTTGTTTGGTCAGGTTATGATTTATGC
TTTCATGAATATGCTTGTCTTATCGAGTACGCAACAATAAATAATGCTCA
GTATTGGAAATATTGTTACAATGGACAGAGAATCTTGAAAGAAGCCTTAC
TTCATTGACACAGATCATATAAGActtattttttgagttttttttatgTA
ACAAAATATCAAGATTTATGTGgatatttttttggtttttgcagATGACA
ATCTGTGGAAAGTTTTGTGGTTTCCCAACTGTTGATAAGAagagaaattt
ttctctttctttaagatgtttttattgaattttttataaaGCTTTTTCCT
TTTAAATCTATTCCAAAATGATTCATAATTTAAATCCTTTCTCATTTTCG
TGTAGTTTCATAGGAACATTATAATCacactttttttcaataatatgCAC
ACTTAGTACATTATCCTCACACCTCAGCATTTTACACTAACTAGCAAACT
AAGTTTGTAATAATAAAACTTTGATTCAATATAAATTCCTTTTTAACCAG
TCCAGTTAGAACTTAAAAAATTCAGATATTAGTTTGGTAAATACAACTTT
ACTAATTATTTTTATTCCCCATGAAGTTTCTTTTTgttaaaagaatttat
tttgtctttactcacaaaatggtacaATTAATTTTCAAGTTCAATGGAGt
atatttaaaaatctttgaaagcAAAACTTCAAATTATACGATGACTCTCG
TCCCTGATCTTTCAAATCAGTCACTTTGAATTACAATATCCATACATGTC
TGAAGCCTTTTTTAcaacgtttttgtttttgctatcGATTTTGACCCCAC
AGGACTTTTATCGGGGGTATTTTGCATTAAAAAGCAACAATTTTCTACCT
GCTTTATTCCAAATACAGATACTTAAATCCCCCTGTTGAAAATCATTAAC
ACGTCACAAAATTAATTGCAAAATAGGGAAAAACAGCACTACTCCAAACA
AATTTTCATCAGTCATTATGTAAATTCtacaataaaatataatcatGGTA
CGGTTTCACTtagatttttaatatttatctCCATCATATTTTTAGCTGTT
TTGGGTATTCATGGTATGCTGACACAAAAACAAAGTGAAACAGCTGATGA
AGATAAAACATGGGACTCCTTAAAAGGATCTGGACTTAGGAAATACAAAG
GCGGTAAGAACTTGGAACTTCTTCTCCATATTGTTATGTGTATTTACATA
TATTTTCGGCTATTCTAAGCACTATGTAATACAATAGACCTGGTCCTATT
TTTAAGTTTGATTATAGTAAAAAAATTGCAAGCTGCATATTTCTGACCTT
ATTTTATTACTTACTACACTTATCACCCCACTGTAATTCATATCCCATTT
GATTTATTCTACTTTTATACTAAAAGTCTATCCTAAAAATCTATCCTCAA
GGTATCACCAAAGCCACCAAGGTCAAAGAATACACAGACAACGAGGCAGT
CAATGAGTTGGACATGGAAGAAGCATTGGCTAAGCTGAAAGCCGGTGATG
AAACACTGGAAGAGTTGAATCTGAACAATCACCAAGAGGTCACCGAAGAT
ATTCTAATGGATATTGTAGAGCATCTGAAAAATAACACTTCTCTGAAGAA
ATTACATTTAGCAAACACACAAATGAAAGATCATATAGGCGAGGTAAGGA
AAACATGACTATTTGATAATAATATCCAGGCATAGTCATACCCATACATC
GTCACTTAGGCGAGGATCTAGATGCATTGAGAGCTGAAATTGAGTTAAAc
tgaggaaaattttttttcagggttGCTGCACTTGTTAATTAACCTTTTGC
ATTCACTATGTCTTTAAAACTCAAGTATTTTCCTAGAAAGTCTGCTGAAT
ATTGACCTCTTTTAACTTTAAGCAAAAGTAGTTAAATAACTGTTTGTTGc
attatttgcaaattttttataatgaatgaatgctaaaaaatgcataaaat
gaGTTTTGAAAGCGACAATCAGTCTACTTTTGTCACTTGTTCGGTGGGTC
ACAAACTACCTTTTGATAACATTATTTGCCTGCGAAAGTTTCTCTCACAC
TCTATATGAAGCTTTTCTTATGAAGATATCAATCTAATGAGATCATttca
aaataaggaaaaaagaTTAATTACATTCTAATGGGTGAGCAATTGAACTA
TCATTTAACATAGTTGCATAATTAATTACCACGCGTATTAAAAGTTTAAT
TGTGTTATCATACAATAGAATCTATTAATGACATCTTACACTGAAGagtc
attttactgaccagattCCTGGCTCTTAATCTTTCTTTCTGTCTGACTCC
AGAATTCGAGACGTCAATATTGAACGCTCTTCATAGGTATATCTGGTAGT
TACAACCAAGGGCGAGAATTCAAGTAATTATTTAGATTCATAATAATGTT
AACTGTATCTATTCATCTTTTGTGTTTTTTAGGAACTTGCAGAAGCTCTG
AAATCAAACACCACTCTGgagattttgaatttagaaTCCAACTTTTTGAA
AGCCGAATCCGTGATGGTGAGTCATGCTTGcaagtttttgataaatacat
attttttacaagaacatccaaaaaaattcaGGTCTTCGGATGCTCctttt
gagttttgagcctaGAAATGTTCCTAAAATGAATTTAGTGAGTGTTTTTG
TGCGAACTCCTAAGATATTTGAGtctgtaaaagtaaaaaaaaaatagttc
ttAACTTTTACTTAATACTTTGaccctcgaagccttatgttcttatatat
agcTTGGTCTTATAAAAGACGTGTATTTCATTATGTTTTAAACATTTCCT
TTatatcaaaactttcttttgtaCGATCAAgtacttctattattcgaatc
tttctgtaattcgaactaaaatattggtcctctcAGCTGAAAAGTGTTAT
AAAgtactctataattcgaagaacatttttggtcccttgaagatcgaatt
agtgagagtcaactgtatttcaGTGTTGACAGAGTTTtactttaaatctt
taaaacgtTAAGATGTAAAACATTTGATTAACAATGAGGATTCCGATTAC
GAAATATTTAAACCTTAAATTGGAAATGAAAACATGGTTAAACATAGCTG
CTTGGACTTCAGTGGTTGTCACtgtcatgattattacttctctcatttga
ccgaaattaaTCCGACAATCATTTTCGTattaattcaaaagtcgtgaaag
ttagtactttttctttgtaattgagtgtaatttgcgtgcaagcaTAATTA
ATGCAAAGGGTAATGGGATAGAATTtcggtcaagcaaaaaaataatgtca
atttttagattCTTCATGGTATTCTATTTGGAAAAATCAATACAATATCT
TTGACCTAAATACCACTTTTTAAAGGATGCACATTCTATCTATGCAAGGT
AGATCCATctaagaaaattctttttgtttgcAGGCTCTTCTTAAAGTGAT
AGAAGTAAACGAATCATTGAAAGAATTGAAACTAGCCAACCAGGTAAatt
tacactttctttattGTTACAGGGTTGCTACGCCTGCAAGAAATGTCCGG
AATTAGTAAAAGTCTGGAAATGACTGGAAAAAGTCTGAAATTGGGATACC
TGTCTAGAAAAGTCAGGAATTGGTATACCTGTCTGATAATAATAATCTGG
ACTTTGATGGAAAACTTTCTTAATGGATAAAATGTCTGGAAAATATCGGG
TATTTTGCGAAAATGTCTGGAACATTTTTGGGACTTTCAGttaaaaatct
tgagaaaaggtGGTTTGAGACTAAAAGTCTGGAATTCTCAATTTGGCAAA
CCTGTAGCAACCCTCTGTTAAGAACTTTAGTTAGTTCGTGCCCCTCTCAC
TACGTTCATGGCGATTGTCTTTTAGTAAATCCCTTTCTATTGCCCAAAGA
CCATCTAAAAAATGAGTTTGGTTAAAAGACTCAAATCCCTTTTTTAAAAC
GTTATATTTATGAAATTCAATGAAGAAGGTTACATAAATGATAAGTtctc
aattttaattttcatttttcagtacAATAAAATTGGACACAAAGCAGAAC
AAGCAATGGCAAAATCGTTGGCTAAAAACACGACGATTCTGAGGTTCGGT
TACAATTTCGATTCGAGGGGACCAAGACACACATGTAACAAATACGTCAT
GAGAAATAATGATATAGGTAAAAATTCTTCACTTTTGTTTCCACTTAGCA
TTTGTATATTGGGCTTTTCTAGGGAAAAAACcgccgtataccccctgtta
aGGAGGTCCATTtctctgtggctggaaatgctgtaaccccctgAAATTCC
AGAccatttcaggtttaaacctctctggaattctgaattttagtaggatt
taaaaagcttccCCCATGGAATTCTAGTTATTTTAGACAGATTTTtatat
ctccctatggaattccgccacatatcaaaccttacccccttggaacggaa
atggacctcctcaacaggagTATAcggtttttctggaaaagcgcAATAAT
CTTTATTCCCCTGTCTTCCCCTGTCTTAGTTTGTAAGCTCTATCCTTCGG
TCGATACAAATGCTAATTTTCTTGGTTTTGGTAAACGCAATCTTTAACTA
AAATAGGGGTTTAATTTGAGCTGGTTATTGGTGGTAAGAAACAGTTCGGT
AGATTTGTCATTTAGTATAAAACTTTTTCCATTCAGCAAAATAAATCTAC
GTATTCGCTATAAGTCGACTTTAGTTTATGTGAAAATTTGACATAGAAGT
TTGGTCGTTCTGCGGTACTTCGCTTTTTTCATCATAAGTAAGGGATAACT
CTCTGCTAAAGAGTAGATCCAAACAACTTAAGTTTTATTAAGATCCTTTG
ATGAGAGAGGTATTTCGACAAATCTCTTCAAGTGTGATTTTGGATTACTT
CTAATAAAAATGTGTTTGTTTGGTAGCAGGGGGGTTGTTTGCTTTTTTAC
CGATGAGtctcaaaaagttctttttatAACTAATATgataattttcttga
ttttgccTCTTATTCGAGCCCCCTTCTGAAGCTATTTTGCATATTTCAAT
gatattatgtttttttatagggATCTTTTCTTTCACCTCCAAATGAATgt
gatgattttttttacacCTCCAATAGCTTATAAGAATGTTCCGAttttct
cctctttcttttcCTCAAAAAACACAGACccgaaatataatttttctcac
ttttcgtttattttacagaccgaCAGAAGAGGCAAGAGGCGAAAAGACAG
AATGGAAACTGAGACGATTGAACTGGTATAAAgctttcaagtttttgttt
ttgtttgaaatggaGATTTTTATTTCCCCTCAAAACATCggtggaaaaaa
agaaaaataactttcaaGAACTGCTTTAAATTATTGAATGGATTATGTCC
TAcagtgaaaaaaagaaaaatatatctaGCTAAGAGGTCTATAATTATGG
AATTGAGAATTGGCGATCCCAGAGTATCTgctctttcctttaaaaatctg
aaacacGACTTAATCAGGTTATACGAAACATCCCTTACCCATCGAAAACT
gtaaaaatgaatttatttttaaaaccgAGCGATTCAATTAATTGTTTTGG
AATTGTTTAtagaaattattattattattattgttggAATTTAAAACACT
TTGCTTGATTTTGATTGGATGAAAATTTGGACTGTGGTACGGAGCTATTT
TACCCGGCTTgaagttttaaaatttcattgaaagttAAAATCCTGAtttc
tttgtatattttttaagcttttaaaGCTGTGAAAATCAGTTCCTTCGAGT
TTATTGTTTTCATCTTATCAGAATAAgcccaaattcttatttttcatttc
ttaatGCGAATATTTAACAAGGAGATAAACGCTGAATGTCACATTTGATC
TTCAAGAAAAttcgaagtttttttaaatgttaaGCAATTCTCTTTGTTTT
TGTACTGGAATTGATAAAGTAGAAATGGAATTTAGAATGATTTTAGGTTA
TTTTAGTTATTTTAgacaaattgaaattaaaatgcaATTGAACGtagatt
ttttctttaattttcagaGATAAAATATCAGTGTTACatttattttgagc
aattttgatttttcctctttattataaattcattttAAAGCATCGTGATT
TATTTCACTTGTATATTTCTTAGTTGTAGTGTAGAGGGtgctttaatttt
ttcaattgtttAGGCCTAGATTATATTGACCGATATTGATTTGCTATTAC
ACcttagaattttttaattttagtatCTAATGACTTTGAAGGGATAAGTT
GAAACAGGTTGAAAAAGTTCAAGTAGAATAATTCTATTTCGAAACAAATG
GAATATTTCCTTATATTTCTTGTTTTTACCAACTAAATCTCAACTCTTCT
ATTCCTCTTAATTTCAAGAACCTAAATTATTGTTATAAACATATAATATA
CATTTGAAATTAAAAccattttttaattcattttcggTTGTGAAACGAAA
AATTCGTAACTTAATTTTAGATTGCGTCACAAGTTGTTTAGcggtaaaaa
atgaattttattaggagagatttattatttatcaaagaaagtaaaaaata
taattttaatttttttatcgtttttttgtgtttttgtatgtacaaaacaa
aatataaaatatacccACTTTATTTTtcgttaaaaa Coding sequence (CDS) from alignment at scaffold_126:161655..171090+ >TCONS_00047330 ID=TCONS_00047330|Name=TCONS_00047330|organism=Clytia hemisphaerica|type=CDS|length=8544bp|location=Sequence derived from alignment at scaffold_126:161655..171090+ (Clytia hemisphaerica)
ATGGCAAAAGTAAGAAATAAGAACTTCCTgacagaagaagaaaaagattt
atttgATGGATTGACTGCAGATGAAATTGCTGAGTTCAACCAAGATCTTG
ATGAAAAAGATgaaGATTTATTGCCTGCAGGACTTCGTGGAGAGGACCAA
ACAACCAAAGATCCTACTGGACCGTTTGATCGTGAAAAATTGATGACATA
TTTGAAGGATGAGGCAGTATCGCAGCCTGATCTGCAAGATCCACATTATG
Taccttttgaaaagaaaacgagaggaagagttttcaaaaagaaagaaaaa
tcaaagactACAACCCCTTTATTGCCAGACGATCTAAGTGATGTTTTGGA
CGCAGCATCTGAGGATGATTTATTAGAATTAGCAGCTGTTTTGGGTATTC
ATGGTATGCTGACACAAAAACAAAGTGAAACAGCTGATGAAGATAAAACA
TGGGACTCCTTAAAAGGATCTGGACTTAGGAAATACAAAGGCGGTATCAC
CAAAGCCACCAAGGTCAAAGAATACACAGACAACGAGGCAGTCAATGAGT
TGGACATGGAAGAAGCATTGGCTAAGCTGAAAGCCGGTGATGAAACACTG
GAAGAGTTGAATCTGAACAATCACCAAGAGGTCACCGAAGATATTCTAAT
GGATATTGTAGAGCATCTGAAAAATAACACTTCTCTGAAGAAATTACATT
TAGCAAACACACAAATGAAAGATCATATAGGCGAGGAACTTGCAGAAGCT
CTGAAATCAAACACCACTCTGgagattttgaatttagaaTCCAACTTTTT
GAAAGCCGAATCCGTGATGGCTCTTCTTAAAGTGATAGAAGTAAACGAAT
CATTGAAAGAATTGAAACTAGCCAACCAGtacAATAAAATTGGACACAAA
GCAGAACAAGCAATGGCAAAATCGTTGGCTAAAAACACGACGATTCTGAG
GTTCGGTTACAATTTCGATTCGAGGGGACCAAGACACACATGTAACAAAT
ACGTCATGAGAAATAATGATATAGaccgaCAGAAGAGGCAAGAGGCGAAA
AGACAGAATGGAAACTGAATGGCAAAAGTAAGAAATAAGAACTTCCTgac
agaagaagaaaaagatttatttgATGGATTGACTGCAGATGAAATTGCTG
AGTTCAACCAAGATCTTGATGAAAAAGATgaaGATTTATTGCCTGCAGGA
CTTCGTGGAGAGGACCAAACAACCAAAGATCCTACTGGACCGTTTGATCG
TGAAAAATTGATGACATATTTGAAGGATGAGGCAGTATCGCAGCCTGATC
TGCAAGATCCACATTATGTaccttttgaaaagaaaacgagaggaagagtt
ttcaaaaagaaagaaaaatcaaagactACAACCCCTTTATTGCCAGACGA
TCTAAGTGATGTTTTGGACGCAGCATCTGAGGATGATTTATTAGAATTAG
CAGCTGTTTTGGGTATTCATGGTATGCTGACACAAAAACAAAGTGAAACA
GCTGATGAAGATAAAACATGGGACTCCTTAAAAGGATCTGGACTTAGGAA
ATACAAAGGCGGTATCACCAAAGCCACCAAGGTCAAAGAATACACAGACA
ACGAGGCAGTCAATGAGTTGGACATGGAAGAAGCATTGGCTAAGCTGAAA
GCCGGTGATGAAACACTGGAAGAGTTGAATCTGAACAATCACCAAGAGGT
CACCGAAGATATTCTAATGGATATTGTAGAGCATCTGAAAAATAACACTT
CTCTGAAGAAATTACATTTAGCAAACACACAAATGAAAGATCATATAGGC
GAGGAACTTGCAGAAGCTCTGAAATCAAACACCACTCTGgagattttgaa
tttagaaTCCAACTTTTTGAAAGCCGAATCCGTGATGGCTCTTCTTAAAG
TGATAGAAGTAAACGAATCATTGAAAGAATTGAAACTAGCCAACCAGtac
AATAAAATTGGACACAAAGCAGAACAAGCAATGGCAAAATCGTTGGCTAA
AAACACGACGATTCTGAGGTTCGGTTACAATTTCGATTCGAGGGGACCAA
GACACACATGTAACAAATACGTCATGAGAAATAATGATATAGaccgaCAG
AAGAGGCAAGAGGCGAAAAGACAGAATGGAAACTGAATGGCAAAAGTAAG
AAATAAGAACTTCCTgacagaagaagaaaaagatttatttgATGGATTGA
CTGCAGATGAAATTGCTGAGTTCAACCAAGATCTTGATGAAAAAGATgaa
GATTTATTGCCTGCAGGACTTCGTGGAGAGGACCAAACAACCAAAGATCC
TACTGGACCGTTTGATCGTGAAAAATTGATGACATATTTGAAGGATGAGG
CAGTATCGCAGCCTGATCTGCAAGATCCACATTATGTaccttttgaaaag
aaaacgagaggaagagttttcaaaaagaaagaaaaatcaaagactACAAC
CCCTTTATTGCCAGACGATCTAAGTGATGTTTTGGACGCAGCATCTGAGG
ATGATTTATTAGAATTAGCAGCTGTTTTGGGTATTCATGGTATGCTGACA
CAAAAACAAAGTGAAACAGCTGATGAAGATAAAACATGGGACTCCTTAAA
AGGATCTGGACTTAGGAAATACAAAGGCGGTATCACCAAAGCCACCAAGG
TCAAAGAATACACAGACAACGAGGCAGTCAATGAGTTGGACATGGAAGAA
GCATTGGCTAAGCTGAAAGCCGGTGATGAAACACTGGAAGAGTTGAATCT
GAACAATCACCAAGAGGTCACCGAAGATATTCTAATGGATATTGTAGAGC
ATCTGAAAAATAACACTTCTCTGAAGAAATTACATTTAGCAAACACACAA
ATGAAAGATCATATAGGCGAGGAACTTGCAGAAGCTCTGAAATCAAACAC
CACTCTGgagattttgaatttagaaTCCAACTTTTTGAAAGCCGAATCCG
TGATGGCTCTTCTTAAAGTGATAGAAGTAAACGAATCATTGAAAGAATTG
AAACTAGCCAACCAGtacAATAAAATTGGACACAAAGCAGAACAAGCAAT
GGCAAAATCGTTGGCTAAAAACACGACGATTCTGAGGTTCGGTTACAATT
TCGATTCGAGGGGACCAAGACACACATGTAACAAATACGTCATGAGAAAT
AATGATATAGaccgaCAGAAGAGGCAAGAGGCGAAAAGACAGAATGGAAA
CTGAATGGCAAAAGTAAGAAATAAGAACTTCCTgacagaagaagaaaaag
atttatttgATGGATTGACTGCAGATGAAATTGCTGAGTTCAACCAAGAT
CTTGATGAAAAAGATgaaGATTTATTGCCTGCAGGACTTCGTGGAGAGGA
CCAAACAACCAAAGATCCTACTGGACCGTTTGATCGTGAAAAATTGATGA
CATATTTGAAGGATGAGGCAGTATCGCAGCCTGATCTGCAAGATCCACAT
TATGTaccttttgaaaagaaaacgagaggaagagttttcaaaaagaaaga
aaaatcaaagactACAACCCCTTTATTGCCAGACGATCTAAGTGATGTTT
TGGACGCAGCATCTGAGGATGATTTATTAGAATTAGCAGCTGTTTTGGGT
ATTCATGGTATGCTGACACAAAAACAAAGTGAAACAGCTGATGAAGATAA
AACATGGGACTCCTTAAAAGGATCTGGACTTAGGAAATACAAAGGCGGTA
TCACCAAAGCCACCAAGGTCAAAGAATACACAGACAACGAGGCAGTCAAT
GAGTTGGACATGGAAGAAGCATTGGCTAAGCTGAAAGCCGGTGATGAAAC
ACTGGAAGAGTTGAATCTGAACAATCACCAAGAGGTCACCGAAGATATTC
TAATGGATATTGTAGAGCATCTGAAAAATAACACTTCTCTGAAGAAATTA
CATTTAGCAAACACACAAATGAAAGATCATATAGGCGAGGAACTTGCAGA
AGCTCTGAAATCAAACACCACTCTGgagattttgaatttagaaTCCAACT
TTTTGAAAGCCGAATCCGTGATGGCTCTTCTTAAAGTGATAGAAGTAAAC
GAATCATTGAAAGAATTGAAACTAGCCAACCAGtacAATAAAATTGGACA
CAAAGCAGAACAAGCAATGGCAAAATCGTTGGCTAAAAACACGACGATTC
TGAGGTTCGGTTACAATTTCGATTCGAGGGGACCAAGACACACATGTAAC
AAATACGTCATGAGAAATAATGATATAGaccgaCAGAAGAGGCAAGAGGC
GAAAAGACAGAATGGAAACTGAATGGCAAAAGTAAGAAATAAGAACTTCC
TgacagaagaagaaaaagatttatttgATGGATTGACTGCAGATGAAATT
GCTGAGTTCAACCAAGATCTTGATGAAAAAGATgaaGATTTATTGCCTGC
AGGACTTCGTGGAGAGGACCAAACAACCAAAGATCCTACTGGACCGTTTG
ATCGTGAAAAATTGATGACATATTTGAAGGATGAGGCAGTATCGCAGCCT
GATCTGCAAGATCCACATTATGTaccttttgaaaagaaaacgagaggaag
agttttcaaaaagaaagaaaaatcaaagactACAACCCCTTTATTGCCAG
ACGATCTAAGTGATGTTTTGGACGCAGCATCTGAGGATGATTTATTAGAA
TTAGCAGCTGTTTTGGGTATTCATGGTATGCTGACACAAAAACAAAGTGA
AACAGCTGATGAAGATAAAACATGGGACTCCTTAAAAGGATCTGGACTTA
GGAAATACAAAGGCGGTATCACCAAAGCCACCAAGGTCAAAGAATACACA
GACAACGAGGCAGTCAATGAGTTGGACATGGAAGAAGCATTGGCTAAGCT
GAAAGCCGGTGATGAAACACTGGAAGAGTTGAATCTGAACAATCACCAAG
AGGTCACCGAAGATATTCTAATGGATATTGTAGAGCATCTGAAAAATAAC
ACTTCTCTGAAGAAATTACATTTAGCAAACACACAAATGAAAGATCATAT
AGGCGAGGAACTTGCAGAAGCTCTGAAATCAAACACCACTCTGgagattt
tgaatttagaaTCCAACTTTTTGAAAGCCGAATCCGTGATGGCTCTTCTT
AAAGTGATAGAAGTAAACGAATCATTGAAAGAATTGAAACTAGCCAACCA
GtacAATAAAATTGGACACAAAGCAGAACAAGCAATGGCAAAATCGTTGG
CTAAAAACACGACGATTCTGAGGTTCGGTTACAATTTCGATTCGAGGGGA
CCAAGACACACATGTAACAAATACGTCATGAGAAATAATGATATAGaccg
aCAGAAGAGGCAAGAGGCGAAAAGACAGAATGGAAACTGAATGGCAAAAG
TAAGAAATAAGAACTTCCTgacagaagaagaaaaagatttatttgATGGA
TTGACTGCAGATGAAATTGCTGAGTTCAACCAAGATCTTGATGAAAAAGA
TgaaGATTTATTGCCTGCAGGACTTCGTGGAGAGGACCAAACAACCAAAG
ATCCTACTGGACCGTTTGATCGTGAAAAATTGATGACATATTTGAAGGAT
GAGGCAGTATCGCAGCCTGATCTGCAAGATCCACATTATGTaccttttga
aaagaaaacgagaggaagagttttcaaaaagaaagaaaaatcaaagactA
CAACCCCTTTATTGCCAGACGATCTAAGTGATGTTTTGGACGCAGCATCT
GAGGATGATTTATTAGAATTAGCAGCTGTTTTGGGTATTCATGGTATGCT
GACACAAAAACAAAGTGAAACAGCTGATGAAGATAAAACATGGGACTCCT
TAAAAGGATCTGGACTTAGGAAATACAAAGGCGGTATCACCAAAGCCACC
AAGGTCAAAGAATACACAGACAACGAGGCAGTCAATGAGTTGGACATGGA
AGAAGCATTGGCTAAGCTGAAAGCCGGTGATGAAACACTGGAAGAGTTGA
ATCTGAACAATCACCAAGAGGTCACCGAAGATATTCTAATGGATATTGTA
GAGCATCTGAAAAATAACACTTCTCTGAAGAAATTACATTTAGCAAACAC
ACAAATGAAAGATCATATAGGCGAGGAACTTGCAGAAGCTCTGAAATCAA
ACACCACTCTGgagattttgaatttagaaTCCAACTTTTTGAAAGCCGAA
TCCGTGATGGCTCTTCTTAAAGTGATAGAAGTAAACGAATCATTGAAAGA
ATTGAAACTAGCCAACCAGtacAATAAAATTGGACACAAAGCAGAACAAG
CAATGGCAAAATCGTTGGCTAAAAACACGACGATTCTGAGGTTCGGTTAC
AATTTCGATTCGAGGGGACCAAGACACACATGTAACAAATACGTCATGAG
AAATAATGATATAGaccgaCAGAAGAGGCAAGAGGCGAAAAGACAGAATG
GAAACTGAATGGCAAAAGTAAGAAATAAGAACTTCCTgacagaagaagaa
aaagatttatttgATGGATTGACTGCAGATGAAATTGCTGAGTTCAACCA
AGATCTTGATGAAAAAGATgaaGATTTATTGCCTGCAGGACTTCGTGGAG
AGGACCAAACAACCAAAGATCCTACTGGACCGTTTGATCGTGAAAAATTG
ATGACATATTTGAAGGATGAGGCAGTATCGCAGCCTGATCTGCAAGATCC
ACATTATGTaccttttgaaaagaaaacgagaggaagagttttcaaaaaga
aagaaaaatcaaagactACAACCCCTTTATTGCCAGACGATCTAAGTGAT
GTTTTGGACGCAGCATCTGAGGATGATTTATTAGAATTAGCAGCTGTTTT
GGGTATTCATGGTATGCTGACACAAAAACAAAGTGAAACAGCTGATGAAG
ATAAAACATGGGACTCCTTAAAAGGATCTGGACTTAGGAAATACAAAGGC
GGTATCACCAAAGCCACCAAGGTCAAAGAATACACAGACAACGAGGCAGT
CAATGAGTTGGACATGGAAGAAGCATTGGCTAAGCTGAAAGCCGGTGATG
AAACACTGGAAGAGTTGAATCTGAACAATCACCAAGAGGTCACCGAAGAT
ATTCTAATGGATATTGTAGAGCATCTGAAAAATAACACTTCTCTGAAGAA
ATTACATTTAGCAAACACACAAATGAAAGATCATATAGGCGAGGAACTTG
CAGAAGCTCTGAAATCAAACACCACTCTGgagattttgaatttagaaTCC
AACTTTTTGAAAGCCGAATCCGTGATGGCTCTTCTTAAAGTGATAGAAGT
AAACGAATCATTGAAAGAATTGAAACTAGCCAACCAGtacAATAAAATTG
GACACAAAGCAGAACAAGCAATGGCAAAATCGTTGGCTAAAAACACGACG
ATTCTGAGGTTCGGTTACAATTTCGATTCGAGGGGACCAAGACACACATG
TAACAAATACGTCATGAGAAATAATGATATAGaccgaCAGAAGAGGCAAG
AGGCGAAAAGACAGAATGGAAACTGAATGGCAAAAGTAAGAAATAAGAAC
TTCCTgacagaagaagaaaaagatttatttgATGGATTGACTGCAGATGA
AATTGCTGAGTTCAACCAAGATCTTGATGAAAAAGATgaaGATTTATTGC
CTGCAGGACTTCGTGGAGAGGACCAAACAACCAAAGATCCTACTGGACCG
TTTGATCGTGAAAAATTGATGACATATTTGAAGGATGAGGCAGTATCGCA
GCCTGATCTGCAAGATCCACATTATGTaccttttgaaaagaaaacgagag
gaagagttttcaaaaagaaagaaaaatcaaagactACAACCCCTTTATTG
CCAGACGATCTAAGTGATGTTTTGGACGCAGCATCTGAGGATGATTTATT
AGAATTAGCAGCTGTTTTGGGTATTCATGGTATGCTGACACAAAAACAAA
GTGAAACAGCTGATGAAGATAAAACATGGGACTCCTTAAAAGGATCTGGA
CTTAGGAAATACAAAGGCGGTATCACCAAAGCCACCAAGGTCAAAGAATA
CACAGACAACGAGGCAGTCAATGAGTTGGACATGGAAGAAGCATTGGCTA
AGCTGAAAGCCGGTGATGAAACACTGGAAGAGTTGAATCTGAACAATCAC
CAAGAGGTCACCGAAGATATTCTAATGGATATTGTAGAGCATCTGAAAAA
TAACACTTCTCTGAAGAAATTACATTTAGCAAACACACAAATGAAAGATC
ATATAGGCGAGGAACTTGCAGAAGCTCTGAAATCAAACACCACTCTGgag
attttgaatttagaaTCCAACTTTTTGAAAGCCGAATCCGTGATGGCTCT
TCTTAAAGTGATAGAAGTAAACGAATCATTGAAAGAATTGAAACTAGCCA
ACCAGtacAATAAAATTGGACACAAAGCAGAACAAGCAATGGCAAAATCG
TTGGCTAAAAACACGACGATTCTGAGGTTCGGTTACAATTTCGATTCGAG
GGGACCAAGACACACATGTAACAAATACGTCATGAGAAATAATGATATAG
accgaCAGAAGAGGCAAGAGGCGAAAAGACAGAATGGAAACTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047330-exon-scaffold_126-1491911889:161655..162232 | TCONS_00047330-exon-scaffold_126-1491911889:161655..162232 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1510915933:161655..162232 | TCONS_00047330-exon-scaffold_126-1510915933:161655..162232 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1575043694:161655..162232 | TCONS_00047330-exon-scaffold_126-1575043694:161655..162232 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1491911889:164008..164281 | TCONS_00047330-exon-scaffold_126-1491911889:164008..164281 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1510915933:164008..164281 | TCONS_00047330-exon-scaffold_126-1510915933:164008..164281 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1575043694:164008..164281 | TCONS_00047330-exon-scaffold_126-1575043694:164008..164281 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1491911889:165450..165557 | TCONS_00047330-exon-scaffold_126-1491911889:165450..165557 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1510915933:165450..165557 | TCONS_00047330-exon-scaffold_126-1510915933:165450..165557 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1575043694:165450..165557 | TCONS_00047330-exon-scaffold_126-1575043694:165450..165557 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1491911889:165806..166047 | TCONS_00047330-exon-scaffold_126-1491911889:165806..166047 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1510915933:165806..166047 | TCONS_00047330-exon-scaffold_126-1510915933:165806..166047 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1575043694:165806..166047 | TCONS_00047330-exon-scaffold_126-1575043694:165806..166047 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1491911889:166837..166920 | TCONS_00047330-exon-scaffold_126-1491911889:166837..166920 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1510915933:166837..166920 | TCONS_00047330-exon-scaffold_126-1510915933:166837..166920 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1575043694:166837..166920 | TCONS_00047330-exon-scaffold_126-1575043694:166837..166920 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1491911889:167838..167897 | TCONS_00047330-exon-scaffold_126-1491911889:167838..167897 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1510915933:167838..167897 | TCONS_00047330-exon-scaffold_126-1510915933:167838..167897 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1575043694:167838..167897 | TCONS_00047330-exon-scaffold_126-1575043694:167838..167897 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1491911889:168427..168571 | TCONS_00047330-exon-scaffold_126-1491911889:168427..168571 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1510915933:168427..168571 | TCONS_00047330-exon-scaffold_126-1510915933:168427..168571 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1575043694:168427..168571 | TCONS_00047330-exon-scaffold_126-1575043694:168427..168571 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1491911889:169623..171090 | TCONS_00047330-exon-scaffold_126-1491911889:169623..171090 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1510915933:169623..171090 | TCONS_00047330-exon-scaffold_126-1510915933:169623..171090 | Clytia hemisphaerica | exon |
| TCONS_00047330-exon-scaffold_126-1575043694:169623..171090 | TCONS_00047330-exon-scaffold_126-1575043694:169623..171090 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_126 | supercontig | scaffold_126:161655..171090 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR004934 | TMOD |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005523 | tropomyosin binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0051694 | pointed-end actin filament capping |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0051694 |
pointed-end actin filament capping |
| molecular_function |
GO:0005523 |
tropomyosin binding |
Blast
BLAST of TCONS_00047330 vs. Swiss-Prot (Human)
Match: TMOD1 (Tropomodulin-1 OS=Homo sapiens GN=TMOD1 PE=1 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.814e-51 Identity = 120/338 (35.50%), Postives = 185/338 (54.73%), Query Frame = 3
Query: 504 EEKDLFDGLTADEIAEFNQDLDEKDED--LLPAGLRGEDQTTKDPTGPFDREKLMTYLKDEAVSQPDLQDPHYVPFEKKTRGRVFKKKEKSKTTTXXXXXXXXXXXXXXXXXXXXXXXXXXGIHGMLTQKQSETADEDKTWDSLKGSGLRKYKG--GITKATKVKEYTDNEAVNELDMEEALAKLKAGDETLEELNLNNHQEVTEDILMDIVEHLKNNTSLKKLHLANTQMKDHIGEELAEALKSNTTLEILNLESNFLKAESVMALLKVIEVNESLKELKLANQYNKIGHKAEQAMAKSLAKNTTILRFGYNFDSRGPRHTCNKYVMRNNDIDRQKR 1505
+E ++ LT +E+ +LDE D D LLPAGLR +DQTTK PTGPF RE+L+ +L+ +A D +D VP+ + RG+V+ K+K ++ +A + EL + I GM T ++ + + +L S + +G + K T+ K D E N D+EE L ++K D LEE+NLNN + + L E LK N+ +KK + T+ D + LAE LK N L+ LN+ESNF+ ++ L++ + N SL E+K+ NQ +G+K E + L KN T+L+FGY+F +GPR + +M NND+ R++R
Sbjct: 14 DEDEILGALTEEELRTLENELDELDPDNALLPAGLRQKDQTTKAPTGPFKREELLDHLEKQAKEFKDRED--LVPYTGEKRGKVWVPKQKPLDPVLESVTLEPELEEALANASDAELCDIAAILGMHTLMSNQ-----QYYQALSSSSIMNKEGLNSVIKPTQYKPVPDEEP-NSTDVEETLERIKNNDPKLEEVNLNNIRNIPIPTLKAYAEALKENSYVKKFSIVGTRSNDPVAYALAEMLKENKVLKTLNVESNFISGAGILRLVEALPYNTSLVEMKIDNQSQPLGNKVEMEIVSMLEKNATLLKFGYHFTQQGPRLRASNAMMNNNDLVRKRR 343
The following BLAST results are available for this feature:
|
