TCONS_00047332 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047332
Unique NameTCONS_00047332
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3065

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047332 ID=TCONS_00047332|Name=TCONS_00047332|organism=Clytia hemisphaerica|type=transcript|length=3065bp
AGATAATACAACAATAGCAGCATCCTATATTGATACAATTGAGCAATGCA
AACGATCTTTTAACATGGGAAACAAAAATGACAGaGAAAAGCTCATGTCT
GTCAACGATGATAATTGGGAAACAGTTGATATCCTCACAAAATCACACAT
GTCAAGTAGTGAGCTACAATCAATCAATACACCTGGTTTAAAGAAATATC
CACAAAGAAAACCTTTGGCTTTGCTTCGATCGGACAGGAATAGCAATAAT
ATCAATGGTCTTGGTGGATTGGGAGGGAAACGGTTTTCTGAAAATCGGAA
AAGTTCGAATCAAGCAGCTTCTACGAATAATGTCAAAAGAAAAGGGAAGA
GCAAGCTTTCAACGTATACACGATCAGTCATAAAGATTTATAGCGATAAT
GAACAACAAGAACCACAAGTTACCAAGGACGGAAAATGGAATTCCACTAT
TTGTAAAGGAGGAAATACTTTATTCAAAGATGTGCTTGATGTTTCTCCCA
TCAAGAAAACAGATCGAACGACACGTGCTAATAATCGAAAAAGTTTTACA
CCAATTCTTGAAGCCAACGCTAAAAGAAGGTCACCCTTTAGAAAACAAAA
TCAACGAATAATGACAAGAGCTGGTACACCGACTATACCAATGTCTCTGa
TGAAGTTAAAGAGACAATCCAGTGCTCAAGATAAGGTCAAAGACTGGTTG
ATGAAGTCTCCAGTGAATGTCTACGAACCTAAAAATATGCCGTCTATTGT
TCCAGAAGTTTCAAGCCATTTTATcaaagaaagcgaaagtgaaagtcaGA
CTCCAGATTCTGAGAAAGAAGAGAAGAACGACGGCTCATGTTCCGATATC
TCGCCTATCCCAACTGAAGTCAGTAATCCGGAAATCGAAAATGATACGGT
ACTTACGGAAATCATAACGGAAATGCAAAACGAACGGAAATCACAAAGGG
CGAAACAGAATGCTAAGTCGGCAAAACCCGAGTCCAGTCCCTCACACAAA
AACAACCGCCGGCCGCGCAAGAAAAGAAAACGCATTTGTATGCCATCTAA
TTGGAAAACCAAACAATCACCTAGTGAAAAATTACGGAAGCCGAAACCGA
AAGCTAACTTACTAGGTAAAGAATTGGATGTCCGGATCAAAGCTCCAGAA
CCTgttaatttgaaaatcaaagaaaacggAGATGTTTCGTTTCAAAAAGC
CTATAATTTACGTAAAAGAGGTGTACACATTCCTATCCAAGATGCTAGAT
TTGGAAATTTTACGCAGCAAACCAACTTAAAGAAAACTATTGTTGACAGA
ATTACCATTGATACTGATTCTGTGACGTCAGAGTCGCAAGTTGGCATAAA
ACCAACCATGCGGACAGGCCCTGTCTGTGAAAGACAGCCATCGGGAAAAA
TATTTGAGGAAATTATTCAGCGAGATGTTAAAGTTGTTTTAAAGAAACTC
GATGTTAAAGATCTAGGGTTATCATTGAAAGACGTTCAAAACGTGGATTC
CATCAAAGATCTGGAGACGAGACAAGATGATGATGGAGATCGGGTTACTA
TTCATACTGATAACGTCGATGATGTACTTTTGGCACAGGTTACTGGTGGT
GAAGACGTTTCCCTTGGTGACGGAGGGGAAGATGAAGTTGGAGGTTCGGG
GAATGGTGAACAAACCAATAACATTGAAGTTGATTTTGTGATCGAAGAAC
CAGTTGGAAAGGATGTGATCGAAGTGTTGGTGATTGAGGATGACGAGCAG
GACAAATGTGATGGTGATGTTGATGATAATGAATCGTATTCGAAAAACGA
GTCACCTCCTCTACCCAATGATCTCGACAATCTGGTTCAAAGTAAACGTA
AATTAAATTTCACACCGAAACTATTAATTGACAATATAACGGCAGCCGAA
AATCCCACGAAAGATAACGTCATCAAACAAGACATCAACAAAGTCAACAA
TGATGATCAACCAACCATAATCACGTGTTGCGATAATCAAGATGGTACCC
AAGCAGCGACAAAGAATCAAACAACTTTTGAAAGCTCGGATATCTCGGAC
TTTAACGAAAGCCTTGGCAGTTTCCAATTTAATACTGCCAAAAATGCTGA
CGCCAATAAAAATTCTTCAAGTGAAGCATCAACGTGTTTCTTACAACGTA
CTTGCGAAACGGACTCTGGTTTTATTGTAGCCTGCGATGATAGTAAATCT
TACGTTACTGATTGTCTTCAGGCTAGTTCATTTGGAAATAACTCAAGTGT
ATCCTCTAAATGAAGTTGACGTTGCTGAAATGCTTTGTGTGTGTGTAAAG
ttgaattgattttgaattaacttgaatttagattttattgtttattgttG
GTGGTTGGGTTGTTTTAGCTTGGTTGTTACGGTTGTattattttaaatgt
tttacaTGTCTAAACAGGTGTTGTGTACTTATGTTTAAAAATGCGCAGCA
AAATGAGAGTTTTGATCACTATGACAAtctccccaggggggggggcgcTT
GATTgaaaaaacgaccatacgtgcggcccaaaattaatTACTTTTGAGTA
AATTATGGAGAAAAATCTACCCTGACGGTGTATtttcttgaaagtttttt
accattttcaggcaaaatatggtcagattttccaaatctTACTCCTTAGA
GTGCAATCTTTCTCAATAAGTACGTACGGCAGGTGATTTACCTTGAATGC
CCCTCCTTTTCCCCCGCTGACAATCGTTTTAAGCCAAGTCAAGTGATGTT
GGTGACATAATTACCAAAAAAAGCCCTTTATAAGGGGTAATCTTTTAAGT
TTTCCAAGCTCTTTTGGGCCAGAGGcaagttttatttactttaagcagct
ttcagacttttaaatggttggaaaaaaatgagcTCAGTGGAGCTCGCCTG
CTCGACTCTTTGCTGTCCACGAGGACTTAGTTCAACGTGTTTAAattgaa
ggaaatatttatttttttatgaaatcatatttataaaacattttcacatA
ATTTATCAAATCTAAGTTatcaaaactaaagaaaaaagaaaagaatttta
atttgaaaaaaaaaa
Run BLAST on NCBI

transcript from alignment at scaffold_126:212709..228926+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047332 ID=TCONS_00047332|Name=TCONS_00047332|organism=Clytia hemisphaerica|type=transcript|length=16218bp|location=Sequence derived from alignment at scaffold_126:212709..228926+ (Clytia hemisphaerica)
AGATAATACAACAATAGCAGGTATTGTTTGATAAAGATAATACAACAATA
GCAGGTATTGTTTGATAAAGATAATACAACAATAGCAGGTATTGTTTGAT
AAAGATAATACAACAATAGCAGGTATTGTTTGATAAAGATAATACAACAA
TAGCAGGTATTGTTTGATAAAGATAATACAACAATAGCAGGTATTGTTTG
ATAAAGATAATACAACAATAGCAGGTATTGTTTGATAAAGATAATACAAC
AATAGCAGGTATTGTTTGATAAAGATAATACAACAATAGCAGGTATTGTT
TGATAAAGATAATACAACAATAGCAGGTATTGTTTGATAAAGATAATACA
ACAATAGCAGGTATTGTTTGATAAAGATAATACAACAATAGCAGGTATTG
TTTGATAAAGATAATACAACAATAGCAggtattgttgtttttttttactt
tttgatattgcatttttttattttttgcaccgGTCTGTAAACTTTTTTCA
ATATCCTAAGTTATAAGGGTGGTGTTTACTAGAGTTCATTAGACTTTTAA
ATGTTTCTTTCCAAAGATCTCTTGgttcaagttaaaaaaaaaaagatttc
ctgtagttgatttttcttttcacgCCTTTCCATATTCAAAGATGGTTTCT
ATTTTATAGTTTTAACTTCTTTTGTTGTCACAAATCTGAAAACATAgata
caaaacaaaagaagaaggtACAAATAGAAAATAGACAACCAACAAAGATA
CCAACAATCAAAAAAGAACAGCAAGATGAAGATAGAGCCTAGAGTCAGTA
GGTGTGGCCTTGAATAAGCACTCTCTGCAATACTATAAacctttatcaaa
attttagcttgttTTCTTTTAATTACAGCATCCTATATTGATACAATTGA
GCAATGCAAACGATCTTTTAACATGGGAAACAAAAATGACAGGTGAATTT
TTATGGatccttttgttttaaaatagttGTAACTCGTAACTGTTACTACc
aagttttaaagatatttaaaaaatgtaaatctgtctaattttcctctttt
tcatGCGGGTATCAGTAAAAGTCTTTGATATATTGGATATCACAAAAAGA
CGGGTACATTCTATtatcaatttcaaaattattcgGACATATAAGGAATT
CTCAAAATAGCACTTTTGACTTTAATGTTTTATGCAATTGATATGTTGGA
TTTTCTTGGGTATATTATGAACTATAAACTATTGGTTGTTAGCCTTAGAA
TTTTAATTTCATTGACTATTTCAGACTTCTTTTACCTTACTCTTAGTACA
GTCACTTTGATTTTTCGCGCAAATATTTCTGGGGTATTTCGAGGTAAAAA
CATTCTCAAGTGACCAAACTCGATTTATTAAGTGACGCATATTTAGACTA
AATAAAGAATTCTTTTATTAAATAAATCTAAAATAGTCACCAAATAGTAT
TTTAATCAACTACATTGTGTTCCTTGCACTTATAAGTCGTAATCAATTGA
AAAGCCTCGTCAACCAAGAGTTTTTCATATCAAGTCACTGAAGAAGAGAG
TCACTGAAAATGTATTCAATTAGTCTAAatattacttttttcttgcaCAC
TGTGATAAATTCATATAGGGATATTTTTATATCAATCAAAAGCTATGACT
TTTGTAAACCAGCACCAGCGTAAGCCTAAAACTTTAAGTAAATCTATTGT
TGTCAATAGATTTCTATACCGAtcttaatttttgtttacagaGAAAAGCT
CATGTCTGTCAACGATGATAATTGGGAAACAGTTGATATCCTCACAAAAT
CACACATGTCAAGTAGTGAGCTACAATCAATCAATACACCTGGTTTAAAG
AAATATCCACAAAGAAAACCTTTGGCTTTGCTTCGATCGGACAGGAATAG
CAATAATATCAATGGTCTTGGTGGATTGGGAGGGAAACGGTTTTCTGAAA
ATCGGAAAAGTTCGAATCAAGCAGCTTCTACGAATAATGTCAAAAGAAAA
GGGAAGAGCAAGCTTTCAACGTATACACGATCAGTCATAAAGATTTATAG
CGATAGTAAGTTCTTTGAATATTTCCTCCCTTTTGCAGTCCTGAAAACCC
CGCCAATTTAATCAGTCCCTGACCAACTCACCAATTTTACAACAGCAACA
GTTGTCAGTTTCAAATAGATCAGTTTCGTTTGATAGATAGATtagataga
tatgccctccgatgtATCGGATTGTCCTTgcaggtgtagaacctcctaAG
TGTGTcagcacaccacaatgtctggaatgtctacccatactcttgtatca
gagttatggtacctaattcccctcacatggcatgggttgacccgggcgaa
ggagcatTCACTTGCGAAGTAATCGTAGCGCTACGGTGAgtatcgaactc
gggcctcctggacagaagtcaagcacaataaccactataccactacgcct
CGTGAGGTTTAACAGTATTTGAATTTCTCTTTTCGACATTTTTCAGATGA
ACAACAAGAACCACAAGTTACCAAGGACGGAAAATGGAATTCCACTATTT
GTAAAGGAGGAAATACTTTATTCAAAGATGTGCTTGATGTTTCTCCCATC
AAGAAAACAGATCGAACGACACGTGCTAATAATCGAAAAAGTTTTACACC
AATTCTTGAAGCCAACGCTAAAAGAAGGTCACCCTTTAGAAAACAAAGTG
AGTAATATACTGTAGTATATATTTTATTGGACACAAAATATAAAGGTCGG
TTACTGATTCTTTTGATTAACCCCATTAAGTGACACTGGAATCGTATGGG
TTTATTCGACTTTCTCGGTCCTACCGGTAGGTCTGGACCTAGACCATGCT
CACACgatacggttccgtttcgctccgaaacgaaatgaagccattctatt
ggttaaatttaagttttacgtcacttctaaccaatagaatggcttcattt
cgtttggAGCGAACATGATCCTAGAAGTGCCGCCCTGTTTTTTAACCCTG
TCCGAATGAAAAACTTAAGTTAAGGTTAGCATTTTCTTCAATTATATTAT
GTGAAAATATGCCTGAATAAATGCTCAAAATATATTATGAATCACGACCG
AATCGAACATCTAAGAATAAAGACTTTTACGTTGGTAATCACGACCATTG
AGTTTGAAAGTCGAAAGCTAGAGGCAAACCTTTTCCATGCAAGTAAAAGT
GATGCTTTAAAATCTACGTCGcattttctttgacaaattgaatgtagcaa
tttcattattttcgcACTTCTCATTTTCCGAATTCTAGTGGTAAATGTTA
Cacgatttttttaataagaatatcagggtgaaaattggccaaatcgtaag
aataccctaggAATACCCTCTAGGATGAATTTTACAGAATTTGaaaagaa
tacagtcattttgtatttggttaacagaaaaaactgcttcctttgttaga
gataaattgaagctttgagcAAGAAATGTataacccaaatgttcactcaa
aagtccaaaacgcataaattgatcatttctcatgtttgtaaaaaagtcat
atctaaaaaagtaagaatacgttaagaatatttcactctcaattttggca
ctttcttaagaatacttgaccctcatccaaagtacactattctttttaaa
aaaagcgttTACATCCAATCCAGTGTTTGTATGTTAAGCACGTGTGCCAG
GCAAGTTATGTAGAAAATGAGTGGCTTCAAATCCCGCAAAAGAGATTCGA
CTCTAGACTTCGACTTTACCTTATCTTTATAGACTTTGGCTTACTTTATT
GATTATAACTTAAGCGAAAAGAAATAATGTAAcaaaaaacaataataata
tTATAAGAATTTATTCCCATTTAAACTACAGACACACTGtaacatttctt
ttttcaaatttgtattcTTGACAATTTATCTTCCAGATCAACGAATAATG
ACAAGAGCTGGTACACCGACTATACCAATGTCTCTGGTAAGTTTCGTCAC
CAAGTTGTTCGTCGTACTCAAAATTGACGatcatgaattttttatttttc
tgctaaTGACATACAAAAACTTTATTATTACTTGGGGCTCATGGCCAGTG
CACAAGTATCTTTTGAAATGGAAGAGAATACTGATGCATTCTTGGAGTTG
TAACAACAATTGATGGCATTGTTGTCTACGTTTGAGGGTAATCTGgatgt
aaaagaaaaaaataggtCTTGCTTTACAATAAGTTTGACAGCTTTAAAAA
GGATGAAGCAGAAAATGAGTACTTTAAGTATAAGTGACTTGTTATctgtc
attttttgaaaaatatttaacatCGTAATATTCCACTTTACAATTATCTT
ATGAACgaatctgattttcaaaaatcttttaaaagctGCTCGCATTTTTG
ATTTACCTAACACCGTATTTAAAAAGGATGgcaatggcatttcaaatcaa
tctTTGAAcgtaatcaaaatatttttatttttatttttgaatagaTGAAG
TTAAAGAGACAATCCAGTGCTCAAGATAAGGTCAAAGACTGGTTGATGAA
GTCTCCAGTGAATGTCTACGAACCTAAAAATATGGTACGTCGACTTCTTG
TCTTTTTTAGTGAAACTTTTGGTAATCATTATCTCGGCTTGATTGAAAGG
AAGTGAAAGATACTCAACCATTACTTTGTGAATTTCATTCAATTATCTGG
GATTATTTATGTACCTTATGATATTCCTTAAAGAtggatagagtcgatat
tttacgtggatagccagtaatctaggacttttagacagtctttcgattgt
ccatgaactgaacggaacattggaaaaggcggggattcgaaccgcgaGCC
CTAGGTTTGAGACGCTGAAGCCTTTGATCACTTGGCTATCGCTCCTTAGT
TTTTCAGTGGTGTTTTCATCGTACTGTTTAtaggattttgataaaaaaca
gCATATTACTCTCGTTTCAGCCGTCTATTGTTCCAGAAGTTTCAAGCCAT
TTTATcaaagaaagcgaaagtgaaagtcaGACTCCAGATTCTGAGAAAGA
AGAGAAGAACGACGGCTCATGTTCCGATATCTCGCCTATCCCAACTGAAG
TCAGTAATCCGGAAATCGAAAATGATACGGTACTTACGGAAATCATAACG
GAAATGCAAAACGAACGGAAATCACAAAGGGCGAAACAGAATGTTAAGTC
GGCAAAACCCGAGACCAGTCCCTCGCACAAAAACAACCTCCGGCCGCGCA
AGANGAACGAACGGAAATCACAAAAGGCGAAACAGAATGCTAAGTCGGCA
AAACCCGAGTCCAGTCCCTCACACAAAAACAACCGCCGGCCGCGCAAGAA
AAGAAAACGCATTTGTATGCCATCTAATTGGAAAACCAAACAATCACCTA
GTGAAAAATTACGGAAGCCGAAACCGAAAGCTAACTTACTAGGTAAAGAA
TTGGATGTCCGGATCAAAGCTCCAGAACCTgttaatttgaaaatcaaaga
aaacggAGATGTTTCGTTTCAAAAAGCCTATAATTTACGTAAAAGAGGTG
TACACATTCCTATCCAAGATGCTAGATTTGGAAATTTTACGCAGCAAACC
AACTTAAAGAAAACTATTGTTGACAGAATTACCATTGATACTGATTCTGT
GACGTCAGAGTCGCAAGTTGGCATAAAACCAACCATGCGGACAGGCCCTG
TCTGTGAAAGACAGCCATCGGGAAAAATATTTGAGGAAATTATTCAGCGA
GATGTTAAAGTTGTTTTAAAGAAACTCGATGTTAAAGATCTAGGGTTATC
ATTGAAAGACGTTCAAAACGTGGATTCCATCAAAGATCTGGAGACGAGAC
AAGATGATGATGGAGATCGGGTTACTATTCATACTGATAACGTCGATGAT
GTACTTTTGGCACAGGTTACTGGTGGTGAAGACGTTTCCCTTGGTGACGG
AGGGGAAGATGAAGTTGGAGGTTCGGGGAATGGTGAACAAACCAATAACA
TTGAAGTTGATTTTGTGATCGAAGAACCAGTTGGAAAGGTAAGTCTGAGT
TGTTGTTTTCTtcatttgtattttacatgtttTCTTTATGCGTGCATGTG
TCGCCAATTTAAATTTGTTATTTTACGCGCCAAGCTGTCCAAAAAAAGAA
GAGTTGGTTCGGTCGGcgagattataaaaataaaagtagaatttctccta
taaaatctcctaaaaaggcagcaaaactactacatcttgacaaaaatccg
aaatagaataaaaaataaaaagacacaaaaagctcgaTTTCAtagataaa
attaaaaattgaaataaagcataaaattctcaaaaccttggaaaaactac
caaaactTTGCAActttggcagtctgtaaagcaatgaaaacaaaaatgta
catagtaccaaaatcaattttatttttatttcgacatTTGAGATTTTAGG
GTCtttcgggcccgtaaaacaactaatcaaattggtctcgcctaattcac
aggaaaattttttcgatttccaaggttagaaattcgatatttttgggttg
gaaatcttggttttataattgaaggttggaaatttgagcgattaccttaa
gctgatttggaaaacgtaaattacccatcataggttttgtagaataaacc
aatgcccttgaaaaatcaagtgaaaaaaacccatgtagaaatgataattt
tccaaggctggttggaaaacatgactttttgggtgggaaatttttgtttt
ccaaacagtaaaaaaaaggtcaaaaatcgatgtgaaaatacatattttgg
tAAATTCGATACCTcgggttgaaaaactagactttttcggtcggaaattt
gtgtttctcctaaacagtttggaaaaagttaaaaattcatGTGGAAAtca
catttttctaagattgagaccctttcttggaaaactagactttttggatt
ggaaatttgtgtttctccaaacagtttggaaaacgttaaaaatccatgtg
gtaATTACGTTcttctaaccattttctgcgcatgtcctttgagaaaacca
caagcgatttttcgctcaaaactgttttgatagaggatatattgtccgat
TGGGCTAGCATAAAAATGTCATAAATTAATCATGCGTTTTGGAGTAATTT
GCTatttaaaacattgaaatttgagaatatatgaatgttttttttctatt
caGTATCAATCACTCTGACTCAAATGAtaacttaaaaaaactcaaaaatt
atatattattgAGCAAAATGTACCATCAATACAAGATTCATAAATCCAAT
TGAATGGTCGTCTTGGGTGACGGCCAGTTACTATAATCACGTAACCAAAG
CTTGAAAATGGACAAACTTATGTGACTCTTTCCAAGGGAATCTGCTGTAG
GAGTAATTTAGAATCTCAGTTTATGAATAAACTATACGGGGTatccaaaa
atataaattgagtAAACGTCTATTTGTCAATTTCGTTGGGTATCGTTATT
TTCTTAGTGACATAATTTATACTTTAAACTATGTATATATTTTAAATAAC
AATCGATTAACTATTGGTCTATTCCAgtgagcccgggggggggggggggg
gtgggaaaaattgggggggggggggggggggggggtagttaGGCAAATTG
ACGGACGGGTATGTGAGGCGGTTAAGTGTACCTTTTCAAGATAGAAAATG
TAAGAATGGATtattgataaatgcactgtaagggtggaaatttcagcaaa
tccagaaagaaattcaaactttcGCTTTGCacgaaaattcttattttttg
ctcTAAACGGTTAAAGTTGAGACAAATACAACTGTAAGGGTAtaaatttc
accaattttttgCTGCACTATAAgtgtgcgattctaaaagccaatttttc
gccacacataccgtcagttggtaaacccactgcccacCCCCCTTGGGTAG
ACGTATGTTGTGGCATTACCGTTaagaaagtatttcttttattcCAAATC
ATCCCTGACAACTGGTACCAGGATCCATCCGTTATAAATTGAATATTGCT
GTTGACATTGAATTATATAACTGGACCGAGTCATATTtggtttttcttat
aagcatatttttctttgttataaaaaccagtaagtTTTAATTCAGACTCT
GTTGTTTTTTGTCACTTTGAGTCACTTTATCCGTTCTGTATTCAAGGGCC
AAACTGGGATATACTAAGCTTTTTCCAGATATTTACTTTGACCAATAAAG
TGCTTAAAATTCAATAATGTCACACTcagcatttttataagaatgttctt
attttcgacGATCTTGAGGttcgttcttttaaaattgtgcAAAAGTTCAT
ATCATAACAtataaaacaaaatctttacaCATCACACACAGTACACAGTG
TCCTGATAAAATCATTTTCGTTAATACATCTTTAGACCGTAGCTGCCGAT
TGCCGCGTGGGCATTTTTTTCCTGGAattgcgttcttaatttttcagact
actctaaatcgacaataacATGCAAAATAaggagcacttaaaattggtaa
aatttggacaatatttgactctcgattttagaaaatccatccctaagttc
cgttaaaactgcttgaaaataagaaaaagttgtagtttcttgtcattttt
ttccaagctgaggctgggcatgttcttactatgttcttaatttttcgacg
aatttcagcctcaatgttcttataaactcggttctaataaaaaataaaac
gtgtaccctgtatataaaaaaactaaaaagtgcGCTTTTTAATCACAAAG
GATATCTGCACCTAGCATCatagccagtaccttcccacaaaccaaatttt
ttctttgttttatggtcagttacaCTTTGAAGCGTTTGTCGAAAGTTATC
GCACTGTGGTGGAGGGTGACGTCGATCCCGTGCGGAGTGCATAAGGGCGG
GAAAACACGGAACTCGAAAATAAAAACTGGAACGGACAATCGAATAGGTA
GGAGAGGATGTGCGTTGATGTTCAATCTAGTCTCAATTTTTGAGTTCCGt
gcattaaaatcaaaacaaaagagttTGGTGAGCtgaagatgttttttttt
gaaattattttgatacacCCCTATTATAACGAAAGAACtatagaagcaaa
aaagtttccaaaagtcTTCAAGCAGCTCCAATTAATGGTATTGTCAACAG
GCTCTTAATTTAGAAAGGTAATGAGATAATCCCACttcttcaaaaggttt
tcttccttgtagagaaaagcaaccaaaatcaaatcaaagaaaactCTCAA
CACTAGCCATAGCCAGTTTTTGAAACAAggatgtaaaataaaaaataatg
aggATTCCAAGACTATCATTTGATGGAAATGAGTCGATCTCGTGCAATTT
CAGGATTAAGAggtacaaataatagaaatataaCATTAATGtatttacca
aaaaatttagCAAAGTTCTAAAGTTGTAATGAAACTATGTCAATGACTAT
AAcatcttaaaaatataaatttatagGAAAGTTagataaaattaataaaa
tttagGTAGATTCCTCTCACAATTCGAAGCAAAACCTCCACATTTTACTG
GCTTACTATCTAGTTTCCAAAGTTGAGAAATTCAAATCTAAAATCTGCNA
AGACAGCTGTGAAGaatgtttttcatttccatTCCCAGCAAACTTTcgaa
tcgaatacaatcaaatttcaCTTTGCTTTCAATCATATGTCAATTtactt
tccaccattttattaatggaatattttcaaactagcGACCAGATAGAGAC
CACATCGAACAGCCAATAAAAACGataacaaacaaacagttcttctttcc
actggaataggccaggaataaacaaaataaattcttccaggtttcATGCC
ATATCCAAAAGATATTCGTTGCCATCCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNAGCGACttcttaaaaaacgaaaaaagcacACGCGA
TGGAGTGCAGCTTGTCCAAAGTCACGGCAAAATGAGCTGCGCCGAAGAGA
AAATCTTGGACGGACTTTTCCGTCCAAGAACATTCGATTCCACGGCAAAA
AGTAACAgacgttaaatcgcgataaaaaagcggttttcgtctaacaggct
actAGCATCACAGCGCTGTCGATCACGGGCTTAGTTCTTTTGTCTTCGCA
TAGCCATTCTGGTTTTTTTCAGGCTTTCGGTATGTGCACTGAAATATCTC
CAGTGCAACGAGAAGGCTGCTTCTCTCACTGACCCATCATTCGAGTAGAC
ACCATTAAAATTCAACTTGTAGCATAAATCATACCACCAACCCCCTCCAA
ACCTTAATCCACACGATATTTCCTGGCCGTAGTCATATGTACCAAATCTA
AAAAAGGATAAAAGGTTCAAACATAGAAAATGGCCAAGTTCTAATTTACG
ATAACTTAGACGGCATGGAGAAAGCTCAAATACCTCTCGACATCGACGAT
TTATAACCAAATGTGATATTCTTACtaagaaaaagttatttttgtgtGAT
GTAACTTTTCACATAAAAATTGCGTCTCTTTCCGCAATTTTATTCCTTAa
gtaatatatttttaaaggaaacttgttttttaccttttccCGTTGTGTGC
GAGCCAGTCTTGAGAAGAATGAGTATTTCCAGCTTTGAAAGTGCCAGAGT
TTAATAGATAACCCGTATTCTCATTTCCAATAGAAAACGCATTGTAGAAT
TCATAATTTCTGATTCCATTGAATCTCCTACCGTAAAGAACCAATTCGGT
GTTTTCTGATCTTTCGGTAAATTTGTGAATTCGCTTATTGCCAAGCCAAT
AATCTCCTTTCAGATTTCCAAAACCATTTTTGTAAGCATTCCAGCTCTGG
TTGAAATTAGTGGAACCATCAATTCGCTTTTGGAATACCGTCCAACCACC
ACCTTCCAAATCCATATCACAAAAGACTTGAAAAATTGGTATCCCCTCAA
CCCCAATCCAATAAACGCCGGACTTTTTGTGGCCTTCTTCAAACCAATCC
AAACATTCGTCTTTCACCTCCCCCGAATCAATCTGGTAAACTTCTGAATT
CCCACCAAGTGAGGTGTCATAAGGCACAAGTTTAGAGGACAACTTTTCAA
TGTAGTAGAATAATGAGCAAAGCCAATTCGACCCAGTGTTGATGATTGAT
GAGataaaacaatgtttttgttgacAAAGCAGCAAGCATTCTGATTTACT
GTGGACACTTGTTTGATGGATTGATTCCACATTTTGCAGTGTCACGTTCT
CTCCTATTCGAATATATTTCGAATCAAGATTGCCCTCAGCATTTGTGATT
TCTCCATAGataacaattaaaaagaaaaatcggaaaaataaCGAGACAGA
CTCCATCCTTCTCTCCTCGCGTGTTCCGACTAAGTAATATGCAATCATCA
ATatgcaatgggctttCATAtcataaaacaaaaatggtTGAAGCCATgtt
taattttaatttgatgggaattttatttccaattttatcaaattattacA
ATAGTATTAAATAATTAATTAATAAGACTATAGAAATATTGAGTAACGTT
TCGCCACATTAAAATATTGTCAAAGGCAAAAGAAATtgaatcaaatcaaa
ttaaGTTCAATACATAATATACATAAACTTTATTCGGCAACTTTTCACCA
CATGACAGGATTCGTAAGGACaatattttgcttttttatcGACACAACCT
GACAACCTATTTGCCCCActgaacattttgattttttgtgacaaaaattt
ttaaacaaatgtcATTGCCAGGGCGATTTAACTCCATATGCGTCACTTCA
Accaccttattacacgaatattactacacgccttttttttataagaatgg
tgtaaatccatttcatcatggatattcttaacttttttgggaaaatcatc
ctaaaatattcttacagcattcttattacttgtgggtaattggcaattta
taatttagaatgctctaaaaatgacattctttgcttgaatagcaaaattc
catgatggtgatattcttagcagattcttaattttttggccattttcatc
atggacattcttataaagtgtattcttataaaaaaaaaagcgtgtagtca
ttttattaacattttattaaacccccttaattaaaaccaggcgtggtgtc
cttgaaaaagcaaataaaatttgtgttaattttaTGCGTGTTAACTTCAA
GGCTGTTGAATACCTGTCTATTTTTTTCTAGGCAACTAATTCAAACCAtg
ttcagacatagtagaaacgTAGGAAGGGACAGGTTATAGGGACAAGTTTA
TACAAATTGATATTCCGTTACGAATATTGTATTATTACACAATACCAATA
TTATTGTATTACACAATAccaatattactgtattacaatactaatattac
tgtattacacaatagcaatattactgtattacacaataccaatattactg
tattacacaataccaatattactgtattacacaataccaatattactgta
ttacacaatACCAATATTACTGCATTACAGTGATGGGTTATAATCGACTC
CAGTCTTCACTTCAACGTAACATTACATCACGAATTGGCGAGTCATTGAC
tgtttttacgtcacttacaaccaattaGCTGTTGGGTCTATGATttattc
aaccaatcagctgttgggacTATGATttattcaaccaatcagctgttggg
acTATGATttattcaaccaatcagctgttgggacTATGATTTACCCAAAG
GTCCCGAATAAACGTCTCTATTAATTAAGCTATCACAAGCTGAATTGCTC
TAAAAAGCCTGGTTTAGGTCTCTAATTACCTTTTTATGGAGTTTTTAAAG
GTAAATNaatttatctcaaaatcattattcaaaaccatgttattgtattt
tggcgcgaaaactgttaaaatcttttccaaagctatgggccacccggtgg
cccgtgcgtcatataggaacacgattcatgggccacccagtggcccgtgc
gtccggaaagggtattttaaacattgcaaaaaaaattgaaatttacaaaC
TACCAGTCACAGTAGGTTTTGAGACAAAACACCACCAAATGCTGACTTTA
GCCATTGCCCagtatactttaatcggattaatctTTGCAAGATTTAATTT
TGCAAGCCAAAAAATTCGCGATTTATTTTCGCAAATAagcttttcgaaaa
attttgaaaatggccctgtaaagctgaaaattcgctgatttttaaatcaa
tttcgTGAGTCAGCGATCTCACGTAATCTCGTGAGTTTTATAGCCTTTAG
GCTGGattggatcctaacctaagaatttaccacaagaatattttaggatg
attttccccaaaaagttatcAATATCCATTATGAAATAAAAGACACCATT
CTTATAATtctccaaattaaatccacgcaaaaattattaatccacttaag
gtacttTGCCATATGGAAAATGCACGGAACTAGTTTTCGTGGTATTCCTG
CGATGTTCAGTTCTCTTTACTaggaaaaagtggaaaaataaAGAATGTCT
CTTTTTACCTTCAGGATGTGATCGAAGTGTTGGTGATTGAGGATGACGAG
CAGGACAAATGTGATGGTGATGTTGATGATAATGAATCGTATTCGAAAAA
CGAGTCACCTCCTCTACCCAATGATGTGAGTGTTCATCATTTTCTTTCCA
CTTAAAACATGATTACAAACATTTTCCGTTTTCAAAAATGGAATTCAACG
AAAATAAATGTTATCATCGGATAGatccttattggaactaatttttgcgg
aaactaatattcgcggtcgaaaaaaaaatcgggaaattgtatttcgcggt
tttgccctgttTCGgacaatttctttcattttcctagggatttttcaaaa
ttgtatttcgcgggttcaaattttcgcggtttaaaaaaatcataattttt
ttgcAGTGTTTAAGATTTTTATATCAAAGTTGGTGACggacattttggat
ttttgtaatATCAATTCACTAGCCATGAACTAAATGTGTTCCTACAGACG
TCCATTTTTCCATCCTTCTAGTTCTAAAAGGGTATTTATATGTGTGAAGA
CATGACCCCATGTCTCTAGGTTCTCTTAGGTTATGGAACAAATGCACAAT
ATACAAGAACTGTAAGGATTTGGAGAAATCTAGTCTTATCTTGGGATCTT
TGAAATTAATTCTCGATAGATTGCATTATCTGCTCAGACACATGTAAACA
TCGTATTTTATGGCTTGTAGGGGAAGTATAAGGGTCAAAAGCgtcaatat
ttaaaaataaagacaCTATTGAAAGATTAAAAGATCacttaattttaaaa
ttttattttctctctATTTTTAAAGCTCGACAATCTGGTTCAAAGTAAAC
GTAAATTAAATTTCACACCGAAACTATTAATTGACAATATAACGGCAGCC
GAAAATCCCACGAAAGATAACGTCATCAAACAAGACATCAACAAAGTCAA
CAATGATGATCAACCAACCATAATCACGTGTTGCGATAATCAAGATGGTA
CCCAAGCAGCGACAAAGAATCAAACAACTTTTGAAAGCTCGGATATCTCG
GACTTTAACGAAAGCCTTGGCAGTTTCCAATTTAATACTGCCAAAAATGC
TGACGCCAATAAAAATTCTTCAAGTGAAGCATCAACGTGTTTCTTACAAC
GTACTTGCGAAACGGACTCTGGTTTTATTGTAGCCTGCGATGATAGTAAA
TCTTACGTTACTGATTGTCTTCAGGCTAGTTCATTTGGAAATAACTCAAG
TGTATCCTCTAAATGAAGTTGACGTTGCTGAAATGCTTTGTGTGTGTGTA
AAGttgaattgattttgaattaacttgaatttagattttattgtttattg
ttGGTGGTTGGGTTGTTTTAGCTTGGTTGTTACGGTTGTattattttaaa
tgttttacaTGTCTAAACAGGTGTTGTGTACTTATGTTTAAAAATGCGCA
GCAAAATGAGAGTTTTGATCACTATGACAAtctccccaggggggggggcg
cTTGATTgaaaaaacgaccatacgtgcggcccaaaattaatTACTTTTGA
GTAAATTATGGAGAAAAATCTACCCTGACGGTGTATtttcttgaaagttt
tttaccattttcaggcaaaatatggtcagattttccaaatctTACTCCTT
AGAGTGCAATCTTTCTCAATAAGTACGTACGGCAGGTGATTTACCTTGAA
TGCCCCTCCTTTTCCCCCGCTGACAATCGTTTTAAGCCAAGTCAAGTGAT
GTTGGTGACATAATTACCAAAAAAAGCCCTTTATAAGGGGTAATCTTTTA
AGTTTTCCAAGCTCTTTTGGGCCAGAGGcaagttttatttactttaagca
gctttcagacttttaaatggttggaaaaaaatgagcTCAGTGGAGCTCGC
CTGCTCGACTCTTTGCTGTCCACGAGGACTTAGTTCAACGTGTTTAAatt
gaaggaaatatttatttttttatgaaatcatatttataaaacattttcac
atAATTTATCAAATCTAAGTTatcaaaactaaagaaaaaagaaaagaatt
ttaatttgaaaaaaaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030154XLOC_030154Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047332-exon-scaffold_126-1491911889:212709..212728TCONS_00047332-exon-scaffold_126-1491911889:212709..212728Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1510915933:212709..212728TCONS_00047332-exon-scaffold_126-1510915933:212709..212728Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1575043694:212709..212728TCONS_00047332-exon-scaffold_126-1575043694:212709..212728Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1491911889:213587..213650TCONS_00047332-exon-scaffold_126-1491911889:213587..213650Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1510915933:213587..213650TCONS_00047332-exon-scaffold_126-1510915933:213587..213650Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1575043694:213587..213650TCONS_00047332-exon-scaffold_126-1575043694:213587..213650Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1491911889:214450..214763TCONS_00047332-exon-scaffold_126-1491911889:214450..214763Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1510915933:214450..214763TCONS_00047332-exon-scaffold_126-1510915933:214450..214763Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1575043694:214450..214763TCONS_00047332-exon-scaffold_126-1575043694:214450..214763Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1491911889:215205..215405TCONS_00047332-exon-scaffold_126-1491911889:215205..215405Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1510915933:215205..215405TCONS_00047332-exon-scaffold_126-1510915933:215205..215405Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1575043694:215205..215405TCONS_00047332-exon-scaffold_126-1575043694:215205..215405Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1491911889:216645..216694TCONS_00047332-exon-scaffold_126-1491911889:216645..216694Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1510915933:216645..216694TCONS_00047332-exon-scaffold_126-1510915933:216645..216694Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1575043694:216645..216694TCONS_00047332-exon-scaffold_126-1575043694:216645..216694Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1491911889:217203..217292TCONS_00047332-exon-scaffold_126-1491911889:217203..217292Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1510915933:217203..217292TCONS_00047332-exon-scaffold_126-1510915933:217203..217292Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1575043694:217203..217292TCONS_00047332-exon-scaffold_126-1575043694:217203..217292Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1491911889:217679..217888TCONS_00047332-exon-scaffold_126-1491911889:217679..217888Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1510915933:217679..217888TCONS_00047332-exon-scaffold_126-1510915933:217679..217888Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1575043694:217679..217888TCONS_00047332-exon-scaffold_126-1575043694:217679..217888Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1491911889:217985..218746TCONS_00047332-exon-scaffold_126-1491911889:217985..218746Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1510915933:217985..218746TCONS_00047332-exon-scaffold_126-1510915933:217985..218746Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1575043694:217985..218746TCONS_00047332-exon-scaffold_126-1575043694:217985..218746Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1491911889:226873..226983TCONS_00047332-exon-scaffold_126-1491911889:226873..226983Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1510915933:226873..226983TCONS_00047332-exon-scaffold_126-1510915933:226873..226983Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1575043694:226873..226983TCONS_00047332-exon-scaffold_126-1575043694:226873..226983Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1491911889:227684..228926TCONS_00047332-exon-scaffold_126-1491911889:227684..228926Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1510915933:227684..228926TCONS_00047332-exon-scaffold_126-1510915933:227684..228926Clytia hemisphaericaexon
TCONS_00047332-exon-scaffold_126-1575043694:227684..228926TCONS_00047332-exon-scaffold_126-1575043694:227684..228926Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_126supercontigscaffold_126:212709..228926 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	6.47273e-08	0	0	0.341638	0.0853993	0.225398	0	0.185125	0	0	0	0	0	0	0	0	1.03182e-09	0	0.132116	0	0	3.87672e-07	3.64901e-06	1.7451e-09	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047332 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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