TCONS_00047333 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047333
Unique NameTCONS_00047333
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3066

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047333 ID=TCONS_00047333|Name=TCONS_00047333|organism=Clytia hemisphaerica|type=transcript|length=3066bp
AAGATAATACAACAATAGCAGCATCCTATATTGATACAATTGAGCAATGC
AAACGATCTTTTAACATGGGAAACAAAAATGACAGaGAAAAGCTCATGTC
TGTCAACGATGATAATTGGGAAACAGTTGATATCCTCACAAAATCACACA
TGTCAAGTAGTGAGCTACAATCAATCAATACACCTGGTTTAAAGAAATAT
CCACAAAGAAAACCTTTGGCTTTGCTTCGATCGGACAGGAATAGCAATAA
TATCAATGGTCTTGGTGGATTGGGAGGGAAACGGTTTTCTGAAAATCGGA
AAAGTTCGAATCAAGCAGCTTCTACGAATAATGTCAAAAGAAAAGGGAAG
AGCAAGCTTTCAACGTATACACGATCAGTCATAAAGATTTATAGCGATAA
TGAACAACAAGAACCACAAGTTACCAAGGACGGAAAATGGAATTCCACTA
TTTGTAAAGGAGGAAATACTTTATTCAAAGATGTGCTTGATGTTTCTCCC
ATCAAGAAAACAGATCGAACGACACGTGCTAATAATCGAAAAAGTTTTAC
ACCAATTCTTGAAGCCAACGCTAAAAGAAGGTCACCCTTTAGAAAACAAA
ATCAACGAATAATGACAAGAGCTGGTACACCGACTATACCAATGTCTCTG
aTGAAGTTAAAGAGACAATCCAGTGCTCAAGATAAGGTCAAAGACTGGTT
GATGAAGTCTCCAGTGAATGTCTACGAACCTAAAAATATGCCGTCTATTG
TTCCAGAAGTTTCAAGCCATTTTATcaaagaaagcgaaagtgaaagtcaG
ACTCCAGATTCTGAGAAAGAAGAGAAGAACGACGGCTCATGTTCCGATAT
CTCGCCTATCCCAACTGAAGTCAGTAATCCGGAAATCGAAAATGATACGG
TACTTACGGAAATCATAACGGAAATGCAAAACGAACGGAAATCACAAAGG
GCGAAACAGAATGCTAAGTCGGCAAAACCCGAGTCCAGTCCCTCACACAA
AAACAACCGCCGGCCGCGCAAGAAAAGAAAACGCATTTGTATGCCATCTA
ATTGGAAAACCAAACAATCACCTAGTGAAAAATTACGGAAGCCGAAACCG
AAAGCTAACTTACTAGGTAAAGAATTGGATGTCCGGATCAAAGCTCCAGA
ACCTgttaatttgaaaatcaaagaaaacggAGATGTTTCGTTTCAAAAAG
CCTATAATTTACGTAAAAGAGGTGTACACATTCCTATCCAAGATGCTAGA
TTTGGAAATTTTACGCAGCAAACCAACTTAAAGAAAACTATTGTTGACAG
AATTACCATTGATACTGATTCTGTGACGTCAGAGTCGCAAGTTGGCATAA
AACCAACCATGCGGACAGGCCCTGTCTGTGAAAGACAGCCATCGGGAAAA
ATATTTGAGGAAATTATTCAGCGAGATGTTAAAGTTGTTTTAAAGAAACT
CGATGTTAAAGATCTAGGGTTATCATTGAAAGACGTTCAAAACGTGGATT
CCATCAAAGATCTGGAGACGAGACAAGATGATGATGGAGATCGGGTTACT
ATTCATACTGATAACGTCGATGATGTACTTTTGGCACAGGTTACTGGTGG
TGAAGACGTTTCCCTTGGTGACGGAGGGGAAGATGAAGTTGGAGGTTCGG
GGAATGGTGAACAAACCAATAACATTGAAGTTGATTTTGTGATCGAAGAA
CCAGTTGGAAAGGATGTGATCGAAGTGTTGGTGATTGAGGATGACGAGCA
GGACAAATGTGATGGTGATGTTGATGATAATGAATCGTATTCGAAAAACG
AGTCACCTCCTCTACCCAATGATCTCGACAATCTGGTTCAAAGTAAACGT
AAATTAAATTTCACACCGAAACTATTAATTGACAATATAACGGCAGCCGA
AAATCCCACGAAAGATAACGTCATCAAACAAGACATCAACAAAGTCAACA
ATGATGATCAACCAACCATAATCACGTGTTGCGATAATCAAGATGGTACC
CAAGCAGCGACAAAGAATCAAACAACTTTTGAAAGCTCGGATATCTCGGA
CTTTAACGAAAGCCTTGGCAGTTTCCAATTTAATACTGCCAAAAATGCTG
ACGCCAATAAAAATTCTTCAAGTGAAGCATCAACGTGTTTCTTACAACGT
ACTTGCGAAACGGACTCTGGTTTTATTGTAGCCTGCGATGATAGTAAATC
TTACGTTACTGATTGTCTTCAGGCTAGTTCATTTGGAAATAACTCAAGTG
TATCCTCTAAATGAAGTTGACGTTGCTGAAATGCTTTGTGTGTGTGTAAA
Gttgaattgattttgaattaacttgaatttagattttattgtttattgtt
GGTGGTTGGGTTGTTTTAGCTTGGTTGTTACGGTTGTattattttaaatg
ttttacaTGTCTAAACAGGTGTTGTGTACTTATGTTTAAAAATGCGCAGC
AAAATGAGAGTTTTGATCACTATGACAAtctccccaggggggggggcgcT
TGATTgaaaaaacgaccatacgtgcggcccaaaattaatTACTTTTGAGT
AAATTATGGAGAAAAATCTACCCTGACGGTGTATtttcttgaaagttttt
taccattttcaggcaaaatatggtcagattttccaaatctTACTCCTTAG
AGTGCAATCTTTCTCAATAAGTACGTACGGCAGGTGATTTACCTTGAATG
CCCCTCCTTTTCCCCCGCTGACAATCGTTTTAAGCCAAGTCAAGTGATGT
TGGTGACATAATTACCAAAAAAAGCCCTTTATAAGGGGTAATCTTTTAAG
TTTTCCAAGCTCTTTTGGGCCAGAGGcaagttttatttactttaagcagc
tttcagacttttaaatggttggaaaaaaatgagcTCAGTGGAGCTCGCCT
GCTCGACTCTTTGCTGTCCACGAGGACTTAGTTCAACGTGTTTAAattga
aggaaatatttatttttttatgaaatcatatttataaaacattttcacat
AATTTATCAAATCTAAGTTatcaaaactaaagaaaaaagaaaagaatttt
aatttgaaaaaaaaaa
Run BLAST on NCBI

transcript from alignment at scaffold_126:212776..228926+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047333 ID=TCONS_00047333|Name=TCONS_00047333|organism=Clytia hemisphaerica|type=transcript|length=16151bp|location=Sequence derived from alignment at scaffold_126:212776..228926+ (Clytia hemisphaerica)
AAGATAATACAACAATAGCAGGTATTGTTTGATAAAGATAATACAACAAT
AGCAGGTATTGTTTGATAAAGATAATACAACAATAGCAGGTATTGTTTGA
TAAAGATAATACAACAATAGCAGGTATTGTTTGATAAAGATAATACAACA
ATAGCAGGTATTGTTTGATAAAGATAATACAACAATAGCAGGTATTGTTT
GATAAAGATAATACAACAATAGCAGGTATTGTTTGATAAAGATAATACAA
CAATAGCAGGTATTGTTTGATAAAGATAATACAACAATAGCAGGTATTGT
TTGATAAAGATAATACAACAATAGCAGGTATTGTTTGATAAAGATAATAC
AACAATAGCAggtattgttgtttttttttactttttgatattgcattttt
ttattttttgcaccgGTCTGTAAACTTTTTTCAATATCCTAAGTTATAAG
GGTGGTGTTTACTAGAGTTCATTAGACTTTTAAATGTTTCTTTCCAAAGA
TCTCTTGgttcaagttaaaaaaaaaaagatttcctgtagttgatttttct
tttcacgCCTTTCCATATTCAAAGATGGTTTCTATTTTATAGTTTTAACT
TCTTTTGTTGTCACAAATCTGAAAACATAgatacaaaacaaaagaagaag
gtACAAATAGAAAATAGACAACCAACAAAGATACCAACAATCAAAAAAGA
ACAGCAAGATGAAGATAGAGCCTAGAGTCAGTAGGTGTGGCCTTGAATAA
GCACTCTCTGCAATACTATAAacctttatcaaaattttagcttgttTTCT
TTTAATTACAGCATCCTATATTGATACAATTGAGCAATGCAAACGATCTT
TTAACATGGGAAACAAAAATGACAGGTGAATTTTTATGGatccttttgtt
ttaaaatagttGTAACTCGTAACTGTTACTACcaagttttaaagatattt
aaaaaatgtaaatctgtctaattttcctctttttcatGCGGGTATCAGTA
AAAGTCTTTGATATATTGGATATCACAAAAAGACGGGTACATTCTATtat
caatttcaaaattattcgGACATATAAGGAATTCTCAAAATAGCACTTTT
GACTTTAATGTTTTATGCAATTGATATGTTGGATTTTCTTGGGTATATTA
TGAACTATAAACTATTGGTTGTTAGCCTTAGAATTTTAATTTCATTGACT
ATTTCAGACTTCTTTTACCTTACTCTTAGTACAGTCACTTTGATTTTTCG
CGCAAATATTTCTGGGGTATTTCGAGGTAAAAACATTCTCAAGTGACCAA
ACTCGATTTATTAAGTGACGCATATTTAGACTAAATAAAGAATTCTTTTA
TTAAATAAATCTAAAATAGTCACCAAATAGTATTTTAATCAACTACATTG
TGTTCCTTGCACTTATAAGTCGTAATCAATTGAAAAGCCTCGTCAACCAA
GAGTTTTTCATATCAAGTCACTGAAGAAGAGAGTCACTGAAAATGTATTC
AATTAGTCTAAatattacttttttcttgcaCACTGTGATAAATTCATATA
GGGATATTTTTATATCAATCAAAAGCTATGACTTTTGTAAACCAGCACCA
GCGTAAGCCTAAAACTTTAAGTAAATCTATTGTTGTCAATAGATTTCTAT
ACCGAtcttaatttttgtttacagaGAAAAGCTCATGTCTGTCAACGATG
ATAATTGGGAAACAGTTGATATCCTCACAAAATCACACATGTCAAGTAGT
GAGCTACAATCAATCAATACACCTGGTTTAAAGAAATATCCACAAAGAAA
ACCTTTGGCTTTGCTTCGATCGGACAGGAATAGCAATAATATCAATGGTC
TTGGTGGATTGGGAGGGAAACGGTTTTCTGAAAATCGGAAAAGTTCGAAT
CAAGCAGCTTCTACGAATAATGTCAAAAGAAAAGGGAAGAGCAAGCTTTC
AACGTATACACGATCAGTCATAAAGATTTATAGCGATAGTAAGTTCTTTG
AATATTTCCTCCCTTTTGCAGTCCTGAAAACCCCGCCAATTTAATCAGTC
CCTGACCAACTCACCAATTTTACAACAGCAACAGTTGTCAGTTTCAAATA
GATCAGTTTCGTTTGATAGATAGATtagatagatatgccctccgatgtAT
CGGATTGTCCTTgcaggtgtagaacctcctaAGTGTGTcagcacaccaca
atgtctggaatgtctacccatactcttgtatcagagttatggtacctaat
tcccctcacatggcatgggttgacccgggcgaaggagcatTCACTTGCGA
AGTAATCGTAGCGCTACGGTGAgtatcgaactcgggcctcctggacagaa
gtcaagcacaataaccactataccactacgcctCGTGAGGTTTAACAGTA
TTTGAATTTCTCTTTTCGACATTTTTCAGATGAACAACAAGAACCACAAG
TTACCAAGGACGGAAAATGGAATTCCACTATTTGTAAAGGAGGAAATACT
TTATTCAAAGATGTGCTTGATGTTTCTCCCATCAAGAAAACAGATCGAAC
GACACGTGCTAATAATCGAAAAAGTTTTACACCAATTCTTGAAGCCAACG
CTAAAAGAAGGTCACCCTTTAGAAAACAAAGTGAGTAATATACTGTAGTA
TATATTTTATTGGACACAAAATATAAAGGTCGGTTACTGATTCTTTTGAT
TAACCCCATTAAGTGACACTGGAATCGTATGGGTTTATTCGACTTTCTCG
GTCCTACCGGTAGGTCTGGACCTAGACCATGCTCACACgatacggttccg
tttcgctccgaaacgaaatgaagccattctattggttaaatttaagtttt
acgtcacttctaaccaatagaatggcttcatttcgtttggAGCGAACATG
ATCCTAGAAGTGCCGCCCTGTTTTTTAACCCTGTCCGAATGAAAAACTTA
AGTTAAGGTTAGCATTTTCTTCAATTATATTATGTGAAAATATGCCTGAA
TAAATGCTCAAAATATATTATGAATCACGACCGAATCGAACATCTAAGAA
TAAAGACTTTTACGTTGGTAATCACGACCATTGAGTTTGAAAGTCGAAAG
CTAGAGGCAAACCTTTTCCATGCAAGTAAAAGTGATGCTTTAAAATCTAC
GTCGcattttctttgacaaattgaatgtagcaatttcattattttcgcAC
TTCTCATTTTCCGAATTCTAGTGGTAAATGTTACacgatttttttaataa
gaatatcagggtgaaaattggccaaatcgtaagaataccctaggAATACC
CTCTAGGATGAATTTTACAGAATTTGaaaagaatacagtcattttgtatt
tggttaacagaaaaaactgcttcctttgttagagataaattgaagctttg
agcAAGAAATGTataacccaaatgttcactcaaaagtccaaaacgcataa
attgatcatttctcatgtttgtaaaaaagtcatatctaaaaaagtaagaa
tacgttaagaatatttcactctcaattttggcactttcttaagaatactt
gaccctcatccaaagtacactattctttttaaaaaaagcgttTACATCCA
ATCCAGTGTTTGTATGTTAAGCACGTGTGCCAGGCAAGTTATGTAGAAAA
TGAGTGGCTTCAAATCCCGCAAAAGAGATTCGACTCTAGACTTCGACTTT
ACCTTATCTTTATAGACTTTGGCTTACTTTATTGATTATAACTTAAGCGA
AAAGAAATAATGTAAcaaaaaacaataataatatTATAAGAATTTATTCC
CATTTAAACTACAGACACACTGtaacatttcttttttcaaatttgtattc
TTGACAATTTATCTTCCAGATCAACGAATAATGACAAGAGCTGGTACACC
GACTATACCAATGTCTCTGGTAAGTTTCGTCACCAAGTTGTTCGTCGTAC
TCAAAATTGACGatcatgaattttttatttttctgctaaTGACATACAAA
AACTTTATTATTACTTGGGGCTCATGGCCAGTGCACAAGTATCTTTTGAA
ATGGAAGAGAATACTGATGCATTCTTGGAGTTGTAACAACAATTGATGGC
ATTGTTGTCTACGTTTGAGGGTAATCTGgatgtaaaagaaaaaaataggt
CTTGCTTTACAATAAGTTTGACAGCTTTAAAAAGGATGAAGCAGAAAATG
AGTACTTTAAGTATAAGTGACTTGTTATctgtcattttttgaaaaatatt
taacatCGTAATATTCCACTTTACAATTATCTTATGAACgaatctgattt
tcaaaaatcttttaaaagctGCTCGCATTTTTGATTTACCTAACACCGTA
TTTAAAAAGGATGgcaatggcatttcaaatcaatctTTGAAcgtaatcaa
aatatttttatttttatttttgaatagaTGAAGTTAAAGAGACAATCCAG
TGCTCAAGATAAGGTCAAAGACTGGTTGATGAAGTCTCCAGTGAATGTCT
ACGAACCTAAAAATATGGTACGTCGACTTCTTGTCTTTTTTAGTGAAACT
TTTGGTAATCATTATCTCGGCTTGATTGAAAGGAAGTGAAAGATACTCAA
CCATTACTTTGTGAATTTCATTCAATTATCTGGGATTATTTATGTACCTT
ATGATATTCCTTAAAGAtggatagagtcgatattttacgtggatagccag
taatctaggacttttagacagtctttcgattgtccatgaactgaacggaa
cattggaaaaggcggggattcgaaccgcgaGCCCTAGGTTTGAGACGCTG
AAGCCTTTGATCACTTGGCTATCGCTCCTTAGTTTTTCAGTGGTGTTTTC
ATCGTACTGTTTAtaggattttgataaaaaacagCATATTACTCTCGTTT
CAGCCGTCTATTGTTCCAGAAGTTTCAAGCCATTTTATcaaagaaagcga
aagtgaaagtcaGACTCCAGATTCTGAGAAAGAAGAGAAGAACGACGGCT
CATGTTCCGATATCTCGCCTATCCCAACTGAAGTCAGTAATCCGGAAATC
GAAAATGATACGGTACTTACGGAAATCATAACGGAAATGCAAAACGAACG
GAAATCACAAAGGGCGAAACAGAATGTTAAGTCGGCAAAACCCGAGACCA
GTCCCTCGCACAAAAACAACCTCCGGCCGCGCAAGANGAACGAACGGAAA
TCACAAAAGGCGAAACAGAATGCTAAGTCGGCAAAACCCGAGTCCAGTCC
CTCACACAAAAACAACCGCCGGCCGCGCAAGAAAAGAAAACGCATTTGTA
TGCCATCTAATTGGAAAACCAAACAATCACCTAGTGAAAAATTACGGAAG
CCGAAACCGAAAGCTAACTTACTAGGTAAAGAATTGGATGTCCGGATCAA
AGCTCCAGAACCTgttaatttgaaaatcaaagaaaacggAGATGTTTCGT
TTCAAAAAGCCTATAATTTACGTAAAAGAGGTGTACACATTCCTATCCAA
GATGCTAGATTTGGAAATTTTACGCAGCAAACCAACTTAAAGAAAACTAT
TGTTGACAGAATTACCATTGATACTGATTCTGTGACGTCAGAGTCGCAAG
TTGGCATAAAACCAACCATGCGGACAGGCCCTGTCTGTGAAAGACAGCCA
TCGGGAAAAATATTTGAGGAAATTATTCAGCGAGATGTTAAAGTTGTTTT
AAAGAAACTCGATGTTAAAGATCTAGGGTTATCATTGAAAGACGTTCAAA
ACGTGGATTCCATCAAAGATCTGGAGACGAGACAAGATGATGATGGAGAT
CGGGTTACTATTCATACTGATAACGTCGATGATGTACTTTTGGCACAGGT
TACTGGTGGTGAAGACGTTTCCCTTGGTGACGGAGGGGAAGATGAAGTTG
GAGGTTCGGGGAATGGTGAACAAACCAATAACATTGAAGTTGATTTTGTG
ATCGAAGAACCAGTTGGAAAGGTAAGTCTGAGTTGTTGTTTTCTtcattt
gtattttacatgtttTCTTTATGCGTGCATGTGTCGCCAATTTAAATTTG
TTATTTTACGCGCCAAGCTGTCCAAAAAAAGAAGAGTTGGTTCGGTCGGc
gagattataaaaataaaagtagaatttctcctataaaatctcctaaaaag
gcagcaaaactactacatcttgacaaaaatccgaaatagaataaaaaata
aaaagacacaaaaagctcgaTTTCAtagataaaattaaaaattgaaataa
agcataaaattctcaaaaccttggaaaaactaccaaaactTTGCAActtt
ggcagtctgtaaagcaatgaaaacaaaaatgtacatagtaccaaaatcaa
ttttatttttatttcgacatTTGAGATTTTAGGGTCtttcgggcccgtaa
aacaactaatcaaattggtctcgcctaattcacaggaaaattttttcgat
ttccaaggttagaaattcgatatttttgggttggaaatcttggttttata
attgaaggttggaaatttgagcgattaccttaagctgatttggaaaacgt
aaattacccatcataggttttgtagaataaaccaatgcccttgaaaaatc
aagtgaaaaaaacccatgtagaaatgataattttccaaggctggttggaa
aacatgactttttgggtgggaaatttttgttttccaaacagtaaaaaaaa
ggtcaaaaatcgatgtgaaaatacatattttggtAAATTCGATACCTcgg
gttgaaaaactagactttttcggtcggaaatttgtgtttctcctaaacag
tttggaaaaagttaaaaattcatGTGGAAAtcacatttttctaagattga
gaccctttcttggaaaactagactttttggattggaaatttgtgtttctc
caaacagtttggaaaacgttaaaaatccatgtggtaATTACGTTcttcta
accattttctgcgcatgtcctttgagaaaaccacaagcgatttttcgctc
aaaactgttttgatagaggatatattgtccgatTGGGCTAGCATAAAAAT
GTCATAAATTAATCATGCGTTTTGGAGTAATTTGCTatttaaaacattga
aatttgagaatatatgaatgttttttttctattcaGTATCAATCACTCTG
ACTCAAATGAtaacttaaaaaaactcaaaaattatatattattgAGCAAA
ATGTACCATCAATACAAGATTCATAAATCCAATTGAATGGTCGTCTTGGG
TGACGGCCAGTTACTATAATCACGTAACCAAAGCTTGAAAATGGACAAAC
TTATGTGACTCTTTCCAAGGGAATCTGCTGTAGGAGTAATTTAGAATCTC
AGTTTATGAATAAACTATACGGGGTatccaaaaatataaattgagtAAAC
GTCTATTTGTCAATTTCGTTGGGTATCGTTATTTTCTTAGTGACATAATT
TATACTTTAAACTATGTATATATTTTAAATAACAATCGATTAACTATTGG
TCTATTCCAgtgagcccgggggggggggggggggtgggaaaaattggggg
ggggggggggggggggggtagttaGGCAAATTGACGGACGGGTATGTGAG
GCGGTTAAGTGTACCTTTTCAAGATAGAAAATGTAAGAATGGATtattga
taaatgcactgtaagggtggaaatttcagcaaatccagaaagaaattcaa
actttcGCTTTGCacgaaaattcttattttttgctcTAAACGGTTAAAGT
TGAGACAAATACAACTGTAAGGGTAtaaatttcaccaattttttgCTGCA
CTATAAgtgtgcgattctaaaagccaatttttcgccacacataccgtcag
ttggtaaacccactgcccacCCCCCTTGGGTAGACGTATGTTGTGGCATT
ACCGTTaagaaagtatttcttttattcCAAATCATCCCTGACAACTGGTA
CCAGGATCCATCCGTTATAAATTGAATATTGCTGTTGACATTGAATTATA
TAACTGGACCGAGTCATATTtggtttttcttataagcatatttttctttg
ttataaaaaccagtaagtTTTAATTCAGACTCTGTTGTTTTTTGTCACTT
TGAGTCACTTTATCCGTTCTGTATTCAAGGGCCAAACTGGGATATACTAA
GCTTTTTCCAGATATTTACTTTGACCAATAAAGTGCTTAAAATTCAATAA
TGTCACACTcagcatttttataagaatgttcttattttcgacGATCTTGA
GGttcgttcttttaaaattgtgcAAAAGTTCATATCATAACAtataaaac
aaaatctttacaCATCACACACAGTACACAGTGTCCTGATAAAATCATTT
TCGTTAATACATCTTTAGACCGTAGCTGCCGATTGCCGCGTGGGCATTTT
TTTCCTGGAattgcgttcttaatttttcagactactctaaatcgacaata
acATGCAAAATAaggagcacttaaaattggtaaaatttggacaatatttg
actctcgattttagaaaatccatccctaagttccgttaaaactgcttgaa
aataagaaaaagttgtagtttcttgtcatttttttccaagctgaggctgg
gcatgttcttactatgttcttaatttttcgacgaatttcagcctcaatgt
tcttataaactcggttctaataaaaaataaaacgtgtaccctgtatataa
aaaaactaaaaagtgcGCTTTTTAATCACAAAGGATATCTGCACCTAGCA
TCatagccagtaccttcccacaaaccaaattttttctttgttttatggtc
agttacaCTTTGAAGCGTTTGTCGAAAGTTATCGCACTGTGGTGGAGGGT
GACGTCGATCCCGTGCGGAGTGCATAAGGGCGGGAAAACACGGAACTCGA
AAATAAAAACTGGAACGGACAATCGAATAGGTAGGAGAGGATGTGCGTTG
ATGTTCAATCTAGTCTCAATTTTTGAGTTCCGtgcattaaaatcaaaaca
aaagagttTGGTGAGCtgaagatgtttttttttgaaattattttgataca
cCCCTATTATAACGAAAGAACtatagaagcaaaaaagtttccaaaagtcT
TCAAGCAGCTCCAATTAATGGTATTGTCAACAGGCTCTTAATTTAGAAAG
GTAATGAGATAATCCCACttcttcaaaaggttttcttccttgtagagaaa
agcaaccaaaatcaaatcaaagaaaactCTCAACACTAGCCATAGCCAGT
TTTTGAAACAAggatgtaaaataaaaaataatgaggATTCCAAGACTATC
ATTTGATGGAAATGAGTCGATCTCGTGCAATTTCAGGATTAAGAggtaca
aataatagaaatataaCATTAATGtatttaccaaaaaatttagCAAAGTT
CTAAAGTTGTAATGAAACTATGTCAATGACTATAAcatcttaaaaatata
aatttatagGAAAGTTagataaaattaataaaatttagGTAGATTCCTCT
CACAATTCGAAGCAAAACCTCCACATTTTACTGGCTTACTATCTAGTTTC
CAAAGTTGAGAAATTCAAATCTAAAATCTGCNAAGACAGCTGTGAAGaat
gtttttcatttccatTCCCAGCAAACTTTcgaatcgaatacaatcaaatt
tcaCTTTGCTTTCAATCATATGTCAATTtactttccaccattttattaat
ggaatattttcaaactagcGACCAGATAGAGACCACATCGAACAGCCAAT
AAAAACGataacaaacaaacagttcttctttccactggaataggccagga
ataaacaaaataaattcttccaggtttcATGCCATATCCAAAAGATATTC
GTTGCCATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAG
CGACttcttaaaaaacgaaaaaagcacACGCGATGGAGTGCAGCTTGTCC
AAAGTCACGGCAAAATGAGCTGCGCCGAAGAGAAAATCTTGGACGGACTT
TTCCGTCCAAGAACATTCGATTCCACGGCAAAAAGTAACAgacgttaaat
cgcgataaaaaagcggttttcgtctaacaggctactAGCATCACAGCGCT
GTCGATCACGGGCTTAGTTCTTTTGTCTTCGCATAGCCATTCTGGTTTTT
TTCAGGCTTTCGGTATGTGCACTGAAATATCTCCAGTGCAACGAGAAGGC
TGCTTCTCTCACTGACCCATCATTCGAGTAGACACCATTAAAATTCAACT
TGTAGCATAAATCATACCACCAACCCCCTCCAAACCTTAATCCACACGAT
ATTTCCTGGCCGTAGTCATATGTACCAAATCTAAAAAAGGATAAAAGGTT
CAAACATAGAAAATGGCCAAGTTCTAATTTACGATAACTTAGACGGCATG
GAGAAAGCTCAAATACCTCTCGACATCGACGATTTATAACCAAATGTGAT
ATTCTTACtaagaaaaagttatttttgtgtGATGTAACTTTTCACATAAA
AATTGCGTCTCTTTCCGCAATTTTATTCCTTAagtaatatatttttaaag
gaaacttgttttttaccttttccCGTTGTGTGCGAGCCAGTCTTGAGAAG
AATGAGTATTTCCAGCTTTGAAAGTGCCAGAGTTTAATAGATAACCCGTA
TTCTCATTTCCAATAGAAAACGCATTGTAGAATTCATAATTTCTGATTCC
ATTGAATCTCCTACCGTAAAGAACCAATTCGGTGTTTTCTGATCTTTCGG
TAAATTTGTGAATTCGCTTATTGCCAAGCCAATAATCTCCTTTCAGATTT
CCAAAACCATTTTTGTAAGCATTCCAGCTCTGGTTGAAATTAGTGGAACC
ATCAATTCGCTTTTGGAATACCGTCCAACCACCACCTTCCAAATCCATAT
CACAAAAGACTTGAAAAATTGGTATCCCCTCAACCCCAATCCAATAAACG
CCGGACTTTTTGTGGCCTTCTTCAAACCAATCCAAACATTCGTCTTTCAC
CTCCCCCGAATCAATCTGGTAAACTTCTGAATTCCCACCAAGTGAGGTGT
CATAAGGCACAAGTTTAGAGGACAACTTTTCAATGTAGTAGAATAATGAG
CAAAGCCAATTCGACCCAGTGTTGATGATTGATGAGataaaacaatgttt
ttgttgacAAAGCAGCAAGCATTCTGATTTACTGTGGACACTTGTTTGAT
GGATTGATTCCACATTTTGCAGTGTCACGTTCTCTCCTATTCGAATATAT
TTCGAATCAAGATTGCCCTCAGCATTTGTGATTTCTCCATAGataacaat
taaaaagaaaaatcggaaaaataaCGAGACAGACTCCATCCTTCTCTCCT
CGCGTGTTCCGACTAAGTAATATGCAATCATCAATatgcaatgggctttC
ATAtcataaaacaaaaatggtTGAAGCCATgtttaattttaatttgatgg
gaattttatttccaattttatcaaattattacAATAGTATTAAATAATTA
ATTAATAAGACTATAGAAATATTGAGTAACGTTTCGCCACATTAAAATAT
TGTCAAAGGCAAAAGAAATtgaatcaaatcaaattaaGTTCAATACATAA
TATACATAAACTTTATTCGGCAACTTTTCACCACATGACAGGATTCGTAA
GGACaatattttgcttttttatcGACACAACCTGACAACCTATTTGCCCC
ActgaacattttgattttttgtgacaaaaatttttaaacaaatgtcATTG
CCAGGGCGATTTAACTCCATATGCGTCACTTCAAccaccttattacacga
atattactacacgccttttttttataagaatggtgtaaatccatttcatc
atggatattcttaacttttttgggaaaatcatcctaaaatattcttacag
cattcttattacttgtgggtaattggcaatttataatttagaatgctcta
aaaatgacattctttgcttgaatagcaaaattccatgatggtgatattct
tagcagattcttaattttttggccattttcatcatggacattcttataaa
gtgtattcttataaaaaaaaaagcgtgtagtcattttattaacattttat
taaacccccttaattaaaaccaggcgtggtgtccttgaaaaagcaaataa
aatttgtgttaattttaTGCGTGTTAACTTCAAGGCTGTTGAATACCTGT
CTATTTTTTTCTAGGCAACTAATTCAAACCAtgttcagacatagtagaaa
cgTAGGAAGGGACAGGTTATAGGGACAAGTTTATACAAATTGATATTCCG
TTACGAATATTGTATTATTACACAATACCAATATTATTGTATTACACAAT
Accaatattactgtattacaatactaatattactgtattacacaatagca
atattactgtattacacaataccaatattactgtattacacaataccaat
attactgtattacacaataccaatattactgtattacacaatACCAATAT
TACTGCATTACAGTGATGGGTTATAATCGACTCCAGTCTTCACTTCAACG
TAACATTACATCACGAATTGGCGAGTCATTGACtgtttttacgtcactta
caaccaattaGCTGTTGGGTCTATGATttattcaaccaatcagctgttgg
gacTATGATttattcaaccaatcagctgttgggacTATGATttattcaac
caatcagctgttgggacTATGATTTACCCAAAGGTCCCGAATAAACGTCT
CTATTAATTAAGCTATCACAAGCTGAATTGCTCTAAAAAGCCTGGTTTAG
GTCTCTAATTACCTTTTTATGGAGTTTTTAAAGGTAAATNaatttatctc
aaaatcattattcaaaaccatgttattgtattttggcgcgaaaactgtta
aaatcttttccaaagctatgggccacccggtggcccgtgcgtcatatagg
aacacgattcatgggccacccagtggcccgtgcgtccggaaagggtattt
taaacattgcaaaaaaaattgaaatttacaaaCTACCAGTCACAGTAGGT
TTTGAGACAAAACACCACCAAATGCTGACTTTAGCCATTGCCCagtatac
tttaatcggattaatctTTGCAAGATTTAATTTTGCAAGCCAAAAAATTC
GCGATTTATTTTCGCAAATAagcttttcgaaaaattttgaaaatggccct
gtaaagctgaaaattcgctgatttttaaatcaatttcgTGAGTCAGCGAT
CTCACGTAATCTCGTGAGTTTTATAGCCTTTAGGCTGGattggatcctaa
cctaagaatttaccacaagaatattttaggatgattttccccaaaaagtt
atcAATATCCATTATGAAATAAAAGACACCATTCTTATAATtctccaaat
taaatccacgcaaaaattattaatccacttaaggtacttTGCCATATGGA
AAATGCACGGAACTAGTTTTCGTGGTATTCCTGCGATGTTCAGTTCTCTT
TACTaggaaaaagtggaaaaataaAGAATGTCTCTTTTTACCTTCAGGAT
GTGATCGAAGTGTTGGTGATTGAGGATGACGAGCAGGACAAATGTGATGG
TGATGTTGATGATAATGAATCGTATTCGAAAAACGAGTCACCTCCTCTAC
CCAATGATGTGAGTGTTCATCATTTTCTTTCCACTTAAAACATGATTACA
AACATTTTCCGTTTTCAAAAATGGAATTCAACGAAAATAAATGTTATCAT
CGGATAGatccttattggaactaatttttgcggaaactaatattcgcggt
cgaaaaaaaaatcgggaaattgtatttcgcggttttgccctgttTCGgac
aatttctttcattttcctagggatttttcaaaattgtatttcgcgggttc
aaattttcgcggtttaaaaaaatcataatttttttgcAGTGTTTAAGATT
TTTATATCAAAGTTGGTGACggacattttggatttttgtaatATCAATTC
ACTAGCCATGAACTAAATGTGTTCCTACAGACGTCCATTTTTCCATCCTT
CTAGTTCTAAAAGGGTATTTATATGTGTGAAGACATGACCCCATGTCTCT
AGGTTCTCTTAGGTTATGGAACAAATGCACAATATACAAGAACTGTAAGG
ATTTGGAGAAATCTAGTCTTATCTTGGGATCTTTGAAATTAATTCTCGAT
AGATTGCATTATCTGCTCAGACACATGTAAACATCGTATTTTATGGCTTG
TAGGGGAAGTATAAGGGTCAAAAGCgtcaatatttaaaaataaagacaCT
ATTGAAAGATTAAAAGATCacttaattttaaaattttattttctctctAT
TTTTAAAGCTCGACAATCTGGTTCAAAGTAAACGTAAATTAAATTTCACA
CCGAAACTATTAATTGACAATATAACGGCAGCCGAAAATCCCACGAAAGA
TAACGTCATCAAACAAGACATCAACAAAGTCAACAATGATGATCAACCAA
CCATAATCACGTGTTGCGATAATCAAGATGGTACCCAAGCAGCGACAAAG
AATCAAACAACTTTTGAAAGCTCGGATATCTCGGACTTTAACGAAAGCCT
TGGCAGTTTCCAATTTAATACTGCCAAAAATGCTGACGCCAATAAAAATT
CTTCAAGTGAAGCATCAACGTGTTTCTTACAACGTACTTGCGAAACGGAC
TCTGGTTTTATTGTAGCCTGCGATGATAGTAAATCTTACGTTACTGATTG
TCTTCAGGCTAGTTCATTTGGAAATAACTCAAGTGTATCCTCTAAATGAA
GTTGACGTTGCTGAAATGCTTTGTGTGTGTGTAAAGttgaattgattttg
aattaacttgaatttagattttattgtttattgttGGTGGTTGGGTTGTT
TTAGCTTGGTTGTTACGGTTGTattattttaaatgttttacaTGTCTAAA
CAGGTGTTGTGTACTTATGTTTAAAAATGCGCAGCAAAATGAGAGTTTTG
ATCACTATGACAAtctccccaggggggggggcgcTTGATTgaaaaaacga
ccatacgtgcggcccaaaattaatTACTTTTGAGTAAATTATGGAGAAAA
ATCTACCCTGACGGTGTATtttcttgaaagttttttaccattttcaggca
aaatatggtcagattttccaaatctTACTCCTTAGAGTGCAATCTTTCTC
AATAAGTACGTACGGCAGGTGATTTACCTTGAATGCCCCTCCTTTTCCCC
CGCTGACAATCGTTTTAAGCCAAGTCAAGTGATGTTGGTGACATAATTAC
CAAAAAAAGCCCTTTATAAGGGGTAATCTTTTAAGTTTTCCAAGCTCTTT
TGGGCCAGAGGcaagttttatttactttaagcagctttcagacttttaaa
tggttggaaaaaaatgagcTCAGTGGAGCTCGCCTGCTCGACTCTTTGCT
GTCCACGAGGACTTAGTTCAACGTGTTTAAattgaaggaaatatttattt
ttttatgaaatcatatttataaaacattttcacatAATTTATCAAATCTA
AGTTatcaaaactaaagaaaaaagaaaagaattttaatttgaaaaaaaaa
a
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030154XLOC_030154Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047333-exon-scaffold_126-1491911889:212776..212796TCONS_00047333-exon-scaffold_126-1491911889:212776..212796Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1510915933:212776..212796TCONS_00047333-exon-scaffold_126-1510915933:212776..212796Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1575043694:212776..212796TCONS_00047333-exon-scaffold_126-1575043694:212776..212796Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1491911889:213587..213650TCONS_00047333-exon-scaffold_126-1491911889:213587..213650Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1510915933:213587..213650TCONS_00047333-exon-scaffold_126-1510915933:213587..213650Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1575043694:213587..213650TCONS_00047333-exon-scaffold_126-1575043694:213587..213650Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1491911889:214450..214763TCONS_00047333-exon-scaffold_126-1491911889:214450..214763Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1510915933:214450..214763TCONS_00047333-exon-scaffold_126-1510915933:214450..214763Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1575043694:214450..214763TCONS_00047333-exon-scaffold_126-1575043694:214450..214763Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1491911889:215205..215405TCONS_00047333-exon-scaffold_126-1491911889:215205..215405Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1510915933:215205..215405TCONS_00047333-exon-scaffold_126-1510915933:215205..215405Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1575043694:215205..215405TCONS_00047333-exon-scaffold_126-1575043694:215205..215405Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1491911889:216645..216694TCONS_00047333-exon-scaffold_126-1491911889:216645..216694Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1510915933:216645..216694TCONS_00047333-exon-scaffold_126-1510915933:216645..216694Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1575043694:216645..216694TCONS_00047333-exon-scaffold_126-1575043694:216645..216694Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1491911889:217203..217292TCONS_00047333-exon-scaffold_126-1491911889:217203..217292Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1510915933:217203..217292TCONS_00047333-exon-scaffold_126-1510915933:217203..217292Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1575043694:217203..217292TCONS_00047333-exon-scaffold_126-1575043694:217203..217292Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1491911889:217679..217888TCONS_00047333-exon-scaffold_126-1491911889:217679..217888Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1510915933:217679..217888TCONS_00047333-exon-scaffold_126-1510915933:217679..217888Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1575043694:217679..217888TCONS_00047333-exon-scaffold_126-1575043694:217679..217888Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1491911889:217985..218746TCONS_00047333-exon-scaffold_126-1491911889:217985..218746Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1510915933:217985..218746TCONS_00047333-exon-scaffold_126-1510915933:217985..218746Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1575043694:217985..218746TCONS_00047333-exon-scaffold_126-1575043694:217985..218746Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1491911889:226873..226983TCONS_00047333-exon-scaffold_126-1491911889:226873..226983Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1510915933:226873..226983TCONS_00047333-exon-scaffold_126-1510915933:226873..226983Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1575043694:226873..226983TCONS_00047333-exon-scaffold_126-1575043694:226873..226983Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1491911889:227684..228926TCONS_00047333-exon-scaffold_126-1491911889:227684..228926Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1510915933:227684..228926TCONS_00047333-exon-scaffold_126-1510915933:227684..228926Clytia hemisphaericaexon
TCONS_00047333-exon-scaffold_126-1575043694:227684..228926TCONS_00047333-exon-scaffold_126-1575043694:227684..228926Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_126supercontigscaffold_126:212776..228926 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	4.18602e-08	0	0	0.225633	0.0535348	0.133787	0	0.122393	0	0	0	0	0	0	0	0	6.45244e-10	0	0.0845782	0	0	2.45417e-07	2.31082e-06	1.07988e-09	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047333 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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