TCONS_00047337 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047337
Unique NameTCONS_00047337
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3839

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047337 ID=TCONS_00047337|Name=TCONS_00047337|organism=Clytia hemisphaerica|type=transcript|length=3839bp
GAAGAGATTGTATTCCCAAGATTAGAACGAGCCAAATTGACTGAAGGTGC
TGATAGCCAGGAATCTTCCAAATTAACCACCTCGTCTGCTAAAAGTAATG
ACGTCCTATTTGAGgATTGTCCGGAAACACCAgcaaaaattatcagaaag
atTGTTCTCCCACAGGTTGGTTGCATATCGCCTGTTTCTGTGTTAAAAGA
ATCTTCCAAATTAACCACCTCATCTGGCAAAAGTAATGAGgATTGTCCGA
AGACACCGTCAAAGGATAGCAGAAAGTTAACTCTCCCGCAGAATTCAACA
AAAGTAGATTTCAAAATGAATATGAGAATAACTCATCACCCTTCAAAGGA
TGTTATTGAGTTGGAGCCTACACAACCTGATGACCCTTATGATTTCATTG
ATGAAGAATCCATTAAAAACGACTCTGGCTTACACGGGGATTTTCCTACA
TTCTCAGATACAGATAATGAAAACACGAATgaAAGCAGCGAGGAAGAAGA
CGATCCGGTCAAAGACCCTtcattgaagaattgaaaattgaagGAAGAAG
AAGTAAAAtctaaggaagaagaagaaacaaaatctAAGGAAGAAGAAGAC
ACAAAATCGACGGATGACGAGGAAGAAGATAGAAAACTGCAGGACCCAGC
CAgctcaaaaaatggtaaagGAAAGAGGAAAAGATCGGCAGAAGAAGAAG
AACACGAGGAAGATGATGACATAACGACGATTATTGTTTGCACGGCCAAC
AACGGAAAAGGACGTCGAAAATGGGACAAAAACCAATCTTGTGTCTTCTG
TTCCGTGAAGAGAAGAAAAATTGATAGACATCTCAGAGACGTTCACTCCG
AAGAATCGGAAGTTGCTGAAATTTTGGCTATAAAATACGATCGTACCGAT
TCCGTAAaactaagaaagaagaaaaagcgACTACGAAAGATTGGCTGGAA
TAGacttagaaaaaagggaaaCTTCCTTCATAATAATGAAGTGCTCAAAA
ATGGTCGCGGATTTTTCATACCTGAAAAGCGACCTACCAAAGACCAGAGC
CACACCAATTAtttattttgtgaattttgtctTGCGGCATATAGCAAAAG
GGATCTGAGAAAACACCTCAAAAGATGCACCGAGAAACCGACTGGCTACA
TTGTTGGTAAAAGAGTTCAATCATCGGCAAGCATGTTTATGTTTACGCCA
CCGTCAGCATCAGACTCACTCAAAAACGTCATGGAGAGAATGATTGTGGA
TGATGTTTCTCGATGTGTCAAAAGCGATTCATTGATCATTGAATACGGAA
ACAAGATGTGTCTAAGGTTGAGGATGGAAGGTGACCAACAACATCATATC
AGTAATAAAATGAGGGAATTGGCTCGACTTGTCATCGAGACCAGGAAATG
CTGTGACCAAGTCTCCTCTCTACAAGATGTCCTTATGCCAAAGAATTTCA
ATTTTGTGATTGAAGCCGTGACAGAATTGGCAGGATGGAACGAAGATGAA
GGCTGCATGGAAACTCCCTCAATTGGTATCAAACTTGGGCATTCTCTTAA
AAGGTGCTCCTTGATTTTGAAGGCAAGAGGAATAAGAGAAAACATCCATT
CCTTAAAGAAGCAGGCAGATGAGTTTTGTGAACTCGTGAAACTCTCGTGG
AACGACGAAATCTCACGTCTTGCACGAACAGAGCTATACCGGAGAAAGTG
GAATAAGCCAAAGCTGTTACCATTAACCTCTGACCTTCAAATTTTGGGAA
ATCATTTAAAAGAAACGATTACAACATCGCTGAATGCTCTTGCCAATGAC
AACAATGACACTGCCAGTTATCGTGATTTGGAAACATCCCTTCTAGCAAA
TATTATATTATTTAACAGAAGAAGATCCGGAGAGCCTGCCAAAATGGAAG
TAGCAAACTTTAAGACAttaactgaaaaagaaaatcccATGAACGACGAA
GTTAAAGAAAGCcttactgaatttgaaagaaaactatGTACGACATAGAA
TTGAACTGCGTGGAAAGCGTGGCCGGAAAGTGCCAGTTCTCTTAACAAGA
GAAGTCTTAAAAGGAATTGATGTTCTGCTCAATCTTCGAAAACAAATTGG
TATCCATGTCGAAAATCCGTATATCTTTGCTGTTACCTCTAATGGGTCTC
TAAAATATGTTCGGGGAGCTGATGCGGTCAGAAAACATGTACGAATTTGC
CATTTAAAGTGTCCAGAAGCAATATATTCAACAAATCTTCGTAAGCATGT
AGCGACGATGTCACAGATTttgaacttagaaaaaaatgagatCGAAATGC
TTGCTACATTTATGGGTCATGACATCGAGATTCACAGAAGATATTACCGA
CTACCAGAAAATGCCCTGCAGCTCGCAAAATGTGGGAAATTAATGATGTT
GATGGAGAAAGGTGGCATTGGCAAACTTCATGGTAAATCACTGGATGATG
TAGAATTAGATTTGGAAgAAACTGTTGATGTACCCAATCCGAGAGATGGA
GAAGGTGAAGAAGGTGGGGGTACAATTCAGATGCTTGAAGATGTAGAAGA
TTCGGATGCAGACTCGGATGACTGGAATAGTGACGCGGATGAACCAAAAC
AAAAAGCAAGGAAAAGAAACGCAAAACGAAACAGGAGAACGTCAGCGCAA
CAAAAATCTACGAGAACGAAagATTTAGATGCAGATTCGGATGACTCGGT
TAGTGACGCGGATGAACCAAAATGGAACCAGAAAAAGCCagcaaaacaaa
ccaaaagaaAAGCCTCCAAAGGCAAAACCTGGTCGAATGACGAGAAAGAA
GCTGTCAGAAGACggcttaaagatttttttaaacttaagaAAGTGCCACG
ACAAGGTGACATTCAACCGTGGctaaaagatgaaccagctttGAAGAATC
GTGATTGGAAAGCCGTGAAATTTCATGTCAATTGGGCTATTATTGCTGAA
AAAAGACAACTAGcgaaacaaaacacaaaaaaaagataattaaTCCTCAA
TCATTTTATTATATTAAGGTGGGTCATCACCTTCAGaattaatttttcat
gtttttaagtaTTCCGTCGATAACTCTTGATGACGTAACATTTAGACAAA
ATTTCACTTGAAAAACTAGTATTGGCTAACTACTACCTActtgataaaaa
aatacagCCCTTAAAAGCTATAAAATAAGTCGATATGGGACCAACTAtcc
gataaaatttttgagtgAGATGGAAGCATCTTTTTTTAGCTAGGATATAT
GATCATgctttttctttgtatatatAGTTTTCTATTTTTACCTCTTTATC
TTCCCAAGGGGGGGGGCAAGGAAGATATTGTGCGAGGAGATAACTAACAT
GAATGACTCCAGTGGAGTCCATGACAGATGTTGAATTCTATTATTTTTGT
TATGTCTTCCTCGTGTCGTGgggttgatatttttttcctcAAACATTTTA
CTGGGAAATGACAATACCTACTAAAATATTAACCAATCAGGATCAAGATT
TTTCCAGCGGGGAAGGGTAGAATTTTAAGTATATTTTCCAACAGGACAGT
TTAATGGACTTATTTTCCAGTCTGTAAAATAGGGTTGGTTTTTATTTTCG
ATAGCTTTattttcagtaaattttgccTTAGATAGTTCTCAATCTCTTCT
TAGGTTTTGACTTACGGGGCCACTGTTTTACACATGCCGACCCACTTGTA
TATAGCACATAGCCTACATGAAATATATCTCAGGGTCAACGGACTCATTC
TGTCTCCAATTCTTGTCTACCGGCCACTAATATTGGTTTCATTGATGAGA
TGTTTAATGTGAATAAAATTTATGGAAGGCAAATATAAT
Run BLAST on NCBI

protein sequence of TCONS_00047337-protein

>TCONS_00047337-protein ID=TCONS_00047337-protein|Name=TCONS_00047337-protein|organism=Clytia hemisphaerica|type=polypeptide|length=271bp
MFMFTPPSASDSLKNVMERMIVDDVSRCVKSDSLIIEYGNKMCLRLRMEG
DQQHHISNKMRELARLVIETRKCCDQVSSLQDVLMPKNFNFVIEAVTELA
GWNEDEGCMETPSIGIKLGHSLKRCSLILKARGIRENIHSLKKQADEFCE
LVKLSWNDEISRLARTELYRRKWNKPKLLPLTSDLQILGNHLKETITTSL
NALANDNNDTASYRDLETSLLANIILFNRRRSGEPAKMEVANFKTLTEKE
NPMNDEVKESLTEFERKLCTT
Run BLAST on NCBI

transcript from alignment at scaffold_126:28083..38468-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047337 ID=TCONS_00047337|Name=TCONS_00047337|organism=Clytia hemisphaerica|type=transcript|length=10386bp|location=Sequence derived from alignment at scaffold_126:28083..38468- (Clytia hemisphaerica)
GAAGAGATTGTATTCCCAAGATTAGAACGAGCCAAATTGACTGAAGGTGC
TGATAGCCAGGTACAGATAAACTTTGTCTACATTTTCACTCTGATCAGGG
GGAGGCATACAATTACTATATGAACGCTATGACACATTAGTACCGTGATG
GCATATATAGAAAAAATTGCGAAACGAACAGTTAGTACACGATAAAATTT
GAAAAGGGAGCATTTTTTTTGAGAATGGTTGAAGTAATTTTTCAAATTTT
GTTGCAAATTTCGGCAGTGATTCTCTTTTACCTCAATTTTATATACCTAG
GATCACATTAATATTTATTTGATACAATCAAATATATCAAATTTTTTTCA
AAGTTTCCAAAGAAAAGGTGATTTCCCCACTCTTATACCTAATAATTGTC
AATATTGGAGTTTGGGGGTAGTGCCGGGATTGTTAAGGTCATAAACAGTT
AATACATTGGGTAGTGACGAAATGGGGGGTGGCATCTGATGAATATATCA
AAATTTTAATACACACAGTGTAAGATAGTTACTGCATGCCCCCCCCTTCT
CTGATCAAGTTTAAAGAAGAATTTAATATCATCTTGGTCCATTACAGATA
TAAAATAAACACAATGTTATATGCTAACTGCATCATGCCTTTTCTGACTA
AACGCTAACTAATTTTACAATAAAATTAAATCTAAAAATTTGGCTTACAG
ATTTCACAAAAATCATGTTTTGTGCGTAACTTATTATTTCAAAATGTCTT
TACATTTAAGGAATCTTCCAAATTAACCACCTCGTCTGCTAAAAGTAATG
ACGTCCTATTTGAGGTAAGATCTTTATTTTCATCACCCTTTACTTCATAT
GAAAAAGACCACTGATTTACCTTAAGGGAACTAAATTTAATCATTTTGAA
TTGCAAAACAAGTTTCTAAGTTTCTTTTTCACTGTTTCTGGTTCTTTTTT
ACGAGATTTCGTAATATTAGGTTCCTTCAAATATTGTCTAACCGCAAAAT
TAAATAAATATTGATAAAATTAGTGGACCGTAAAAACTAATTCCACAAAA
AAAATATATTTTGTGATCCGCAAAAACTAGTTCCCGCAAAAATCAGTTCC
CTTAACAGCAAGTTGGAATTCGTGGAAACTCTACAAAAGCTGTTGGAAAG
CCTTTGAAACCAGTTTTGCTGGAAATCTCTAGGCAAATTTGACCCCTGAA
AACCATTTTTTGTCGAATTAACTCTTTCGGTACCATGGCAAACTCAAATT
TGACATTTTTTTTCTTTTTGCAATTACCAAACTTTGAAGCCAATTATCTC
AAGAACCAGAAGGGCTAAACAGGTCAAGTTTGAGTTCGTTGGAAAGCTCT
TCTCAAGAGCTATCTTTTCAGTGTGCCGGATTTCTGATTTAGGCCCTTAA
TCAGAGCTGCCGGCAGCCGAAAGTGATCGTACATATATGAACGAATTTTG
GCTGGGTGGTACTGAAAGAGTTAAGGATCATTTATTTCATTTTTCATATT
TGGATCATTTTTTTCTCAAGGATTGTCCGGAAACACCAGCAAAAATTATC
AGAAAGATTGTTCTCCCACAGGTAACTTTTTTCATCTTCATATTCATAAA
TGGGATTTTTTGAATTGTATTAAATTTTTTTAAATATTTTTATGTACTTT
TTTAATGTACTTTTTTACAAAAAAGAAAAAAACTTGATGAACCTTTTTGT
TAATTATTCATATTAACAATGAAGTGAAAATGAAACAAATGAAATACCTT
TAACAACGTAGTAGGTATTATATTAGCTACTATCACTTGGTAAAAATATA
ACTATTGACACAGTTATGGACGACTAAACTTTATTTCAGATTTCATGTAA
AAAAGATTTACTGTAAAACTTTTTTCTTTACAGGTTGGTTGCATATCGCC
TGTTTCTGTGTTAAAAGTAAGTTTTACCTTTTTTTATACAAATGAACCCT
CTCTATTTGTTGTTTTTACAAAGAAGACCATCATAATTTGCTTCTCCCCC
TACCCCTCTGACTAAGAATCGAAAATAACAATAAAGCCAAATAAAAATCT
AGGATGAAGAGAACACATTCACAAAAATCATGTTCTGTGCGTAACTTCTT
ATTCTAATTGTCTTTAAGGAATCTTCCAAATTAACCACCTCATCTGGCAA
AAGTAATGAGGTAAGATTTAATTACTTTATTTACATCAATCTTTACTTCA
TATGAAAAAGGGCCACTGATTTATTTGGATCATTTTTTTCTCAAGGATTG
TCCGAAGACACCGTCAAAGGATAGCAGAAAGTTAACTCTCCCGCAGGTAA
CTTCTTTGTTTTCTTTTTTTATAAAATATGATTATTGGTATTGTATACTA
NTCTCAAGGATTGTCCGGAAACACCAGCAAAAATTATCAGAAAGATTGTT
CTCCCACAGGTAACTTTTTTCATCTTCATATTCATAAATGGGATTTTTTG
AATTGTATTAAATTTTTTTAAATATTTTTATGTACTTTTTTAATGTACTT
TTTTACAAAAAAGAAAAAAACTTGATGAACCTTTTTGTTAATTATTCATA
TTAACAATGAAGTGAAAATGAAACAAATGAAATACCTTTAACAACGTAGT
AGGTATTATATTAGCTACTATCACTTGGTAAAAATATAACTATTGACACA
GTTATGGACGACTAAACTTTATTTCAGATTTCATGTAAAAAAGATTTACT
GTAAAACTTTTTTCTTTACAGGTTGGTTGCATATCGCCTGTTTCTGTGTT
AAAAGTAAGTTTTACCTTTTTTTATACAAATGAACCCTCTCTATTTGTTG
TTTTTACAAAGAAGACCATCATAATTTGCTTCTCCCCCTACCCCTCTGAC
TAAGAATCGAAAATAACAATAAAGCCAAATAAAAATCTAGGATGAAGAGA
ACACATTCACAAAAATCATGTTCTGTGCGTAACTTCTTATTCTAATTGTC
TTTAAGGAATCTTCCAAATTAACCACCTCATCTGGCAAAAGTAATGAGGT
AAGATTTAATTACTTTATTTACATCAATCTTTACTTCATATGAAAAAGGG
CCACTGATTTATTTGGATCATTTTTTTCTCAAGGATTGTCCGAAGACACC
GTCAAAGGATAGCAGAAAGTTAACTCTCCCGCAGGTAACTTCTTTGTTTT
CTTTTTTTATAAAATATGATTATTGGTATTGTATACTAAAATCTTTTATA
TCTTTATGTACTTTTTTATAACGAAGTTTACAATGTGATTCATGTTGTTT
AATAAATATTAAGATTTTAAAGAATTTAACTTCTAAGGGGATTGAAATAA
ATGAAAAGTGAAGGGCAAAACGAGGGACGGGGAAATTAAGAGGGTTTGCA
GCTGGCTGCGAATATAAAAAATGTAATAAATGATAGTGATTTGTAAGAAC
TTAATGACAAAAAACATACGCCGTAGCATACTCTCGGGTACCTAATAAGC
GTCCCCCCCGCTAATTAATTTTTTCGAAAATTTTCCACCCAGGACATTGT
TATTCCAACCCCCCCTGCTTATTAATTTTTAGAAAAACATTTTTGAAAGT
TCGTTTTTTTTCCCTGATTCTTCTGTATTAGACTGCTTTTCAAAACTTTT
CCACCCAGGACATTTTTATTCCAACCCCCCCCCCCCCCNNNNNNNNNNNN
NNNNNNNNNNCTTTCCCCCCCCCCCCCCCCCCGTCTATTAGGTACCCGAG
AGTAAGGCTAGAGAGACTGAACAAATACATTCTATTTATATTGTCAGAAT
TCAACAAAAGTAGATTTCAAAATGAATATGAGAATAACTCATCACCCTTC
AAAGGATGTTATTGAGTTGGAGCCTACACAACCTGATGTGAGTTCTATTG
TTTTTTGATCAATTCAAACATAATTTAAATTTCTTAATGTTTTCAGCTTT
ATCTAGTACACGCTTTTTTAAAAGAACCAGTGAATTTCAGTTGAGGCTTA
CTGTTCTTAAGAATTTCTTGATTTTAAGGCTGAAATGTTCTTATTCTGTT
CTAAGCCTAAAGTCGATCGTTTCCTTTCTTTCTTACCTTTCATAATTCAT
ATTGGAATAGATCAGTAAAAAATGACCAAATTCAACGTCAGAAAGGAATT
TGATCAGAGTCTACCCACTAATTACTGATTTATCCATAACTAAATCATAA
AACATCCTTCTTCTAAGGAATTTGAGAACTTGCTCTATTGTTCTTAAGTT
GGTCTTAAGTTCATAAAATCTTTCTTATAAACTAAACTTTTCTTCTACCA
ATGTTTTCAATAGGACCCTTATGATTTCATTGATGAAGAATCCATTAAAA
ACGACTCTGGCTTACACGGGGATTTTCCTACATTCTCAGATACAGATAAT
GAAAACACGAATGTATGTATCAAATTTCACTGTGTAATTTTCCAAATGAC
TACTCTCGAGCCTCTTATAAACGTGCAGTTACGTCTATTAATTTTGACAA
CAATTTTTGAAGTACAGTTTAGCTTACAAGACTAAGTAGCCATCATTAAT
ATTTTGGAATTAATCTACTCGTCAAAAGAATACAATTTAATCCGTTTTTG
CTCCTATTGATCATTGGAAATTTTCTTAAATACAATCAATAAGTCTGGTT
TTCATCCCTGTATGTTTACTCCCTCCTGTATGTTTATTCGAGACCCGAGA
GTAACAAAAGTCATGCAAACAGCCGCTTTATTTGCTAAATTAAAATTTAT
GTTTTAGCATAGAAATCAATTCTCTTTCTCTTGCGTAAAAATGAATATTA
ATCTTTTCAAAACACTGGAAAACAAAGAAATATTTTGATTAGAAATCGAA
ATCGAGCTTGAATATTATTATAGGTAGTAAGTACAAACAAGAAGTCTCAT
TTAGTAGTTATTTCTAGAATGAGTTCTTCCTTTTGGAATTTAACTGTACT
CGTTGTTTGCACGAATATTTCCACCATTTTAGGAAAGCAGCGAGGAAGAA
GACGATCCGGTCAAAGACCCTTCATTGAAGAATTGAAAATTGAAGGAAGA
AGAAGTAAAATCTAAGGAAGAAGAAGAAACAAAATCTAAGGAAGAAGAAG
ACACAAAATCGACGGATGACGAGGAAGAAGATAGAAAACTGCAGGACCCA
GCCAGCTCAAAAAATGGTAAAGGAAAGAGGAAAAGATCGGCAGAAGAAGA
AGAACACGAGGAAGATGATGACATAACGACGATTATTGTTTGCACGGCCA
ACAACGGAAAAGGACGTCGAAAATGGGACAAAAACCAATCTTGTGTCTTC
TGTTCCGTGAAGAGAAGAAAAATTGATAGACATCTCAGAGACGTTCACTC
CGAAGAATCGGAAGTTGCTGAAATTTTGGCTATAAAATACGATCGTACCG
ATTCCGTAAAACTAAGAAAGAAGAAAAAGCGACTACGAAAGATTGGCTGG
AATAGACTTAGAAAAAAGGGAAACTTCCTTCATAATAATGAAGTGCTCAA
AAATGGTCGCGGATTTTTCATACCTGAAAAGCGACCTACCAAAGACCAGA
GCCACACCAATTATTTATTTTGTGAATTTTGTCTTGCGGCATATAGCAAA
AGGGATCTGAGAAAACACCTCAAAAGATGCACCGAGAAACCGACTGGCTA
CATTGTTGGTAAAAGAGTTCAATCATCGGCAAGCATGTTTATGTTTACGC
CACCGTCAGCATCAGACTCACTCAAAAACGTCATGGAGAGAATGATTGTG
GATGATGTTTCTCGATGTGTCAAAAGCGATTCATTGATCATTGAATACGG
AAACAAGATGTGTCTAAGGTTGAGGATGGAAGGTGACCAACAACATCATA
TCAGTAATAAAATGAGGGAATTGGCTCGACTTGTCATCGAGACCAGGAAA
TGCTGTGACCAAGTCTCCTCTCTACAAGATGTCCTTATGCCAAAGAATTT
CAATTTTGTGATTGAAGCCGTGACAGAATTGGCAGGATGGAACGAAGATG
AAGGCTGCATGGAAACTCCCTCAATTGGTATCAAACTTGGGCATTCTCTT
AAAAGGTGCTCCTTGATTTTGAAGGCAAGAGGAATAAGAGAAAACATCCA
TTCCTTAAAGAAGCAGGCAGATGAGTTTTGTGAACTCGTGAAACTCTCGT
GGAACGACGAAATCTCACGTCTTGCACGAACAGAGCTATACCGGAGAAAG
TGGAATAAGCCAAAGCTGTTACCATTAACCTCTGACCTTCAAATTTTGGG
AAATCATTTAAAAGAAACGATTACAACATCGCTGAATGCTCTTGCCAATG
ACAACAATGACACTGCCAGTTATCGTGATTTGGAAACATCCCTTCTAGCA
AATATTATATTATTTAACAGAAGAAGATCCGGAGAGCCTGCCAAAATGGA
AGTAGCAAACTTTAAGACATTAACTGAAAAAGAAAATCCCATGAACGACG
AAGTTAAAGAAAGCCTTACTGAATTTGAAAGAAAACTATGTACGACATAG
AATTGAACTGCGTGGAAAGCGTGGCCGGAAAGTGCCAGTTCTCTTAACAA
GAGAAGTCTTAAAAGGAATTGATGTTCTGCTCAATCTTCGAAAACAAATT
GGTATCCATGTCGAAAATCCGTATATCTTTGCTGTTACCTCTAATGGGTC
TCTAAAATATGTTCGGGGAGCTGATGCGGTCAGAAAACATGTACGAATTT
GCCATTTAAAGTGTCCAGAAGCAATATATTCAACAAATCTTCGTAAGCAT
GTAGCGACGATGTCACAGATTTTGAACTTAGAAAAAAATGAGATCGAAAT
GCTTGCTACATTTATGGGTCATGACATCGAGATTCACAGAAGATATTACC
GACTACCAGAAAATGCCCTGCAGCTCGCAAAATGTGGGAAATTAATGATG
TTGATGGAGAAAGGTGGCATTGGCAAACTTCATGGTAAATCACTGGATGA
TGTAGAATTAGATTTGGAAGGTATTTCATTTTTCTTTTTTTTTCTTTTCT
TTTTTAATTTCTAACTAGCTTTGAAGTTAGGAGAGAACATTTCAAAGGCT
GTCCTCGGAATGAGCCATTGTAACCAATTTAAGCTTATATCTTTATTTGG
CAAGTCTGAGTAAAAATTGAAAAATTACTGGAAAACTTTGTAAATAGTGG
GAGTTTCGGTACCATAGAGGGTCACTTTTTCACGTTTTTGGTAAAAACTT
GAAAATTAGTACTCAAACTACTCAAAAATTAGTTCCACGTAGGGTCGATT
TTCCTTGTACTCTCCACCCCGGACCCGATGCATGTTCCATTGGTGAAATA
AAAAACAAAACTTGGTTCAGTTCTTTGATTTATCATACTTCGCATTATTC
ACAGGAAAAACTTAATAGATCACAAGCTTTGTGAAATGTCGTTTCCAGAT
TTGGGAATAGGTGGGTTTCCCAAACTAATCACAAGGTTGGGATCCTGCAA
CTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNAAGAAAACCCAATGTTCACAATATCCCAAACTTTATTTCACAAACTAA
ATTTTGAAAATCCGATTTTTAAGGGCCGGAAACGACGTTTCACGAACTTG
TGATCTGCTAATTTTTTCCTGTGATTTTTAAGGGAAAAAATTTCTACAGT
AGCTCTACCACTTTTTACATAGTTTCGTTAATCAATAATATCTGCGTACA
GTTTTCATAGAATTTGAATTGATACAGCCCTTTTTACAACGTGACGTTTG
ATGAAATAAACAGATATTTATCACAAGAGTCACTTTTATATCAATTTATA
TATATCAATTTATATTGACATATAAACATGATAATTCTTTCTTTCACTCT
GTTCTCTTTTCTTACTAAAGTTTCGACATGAAAATTGCTAAAAAATTAAT
TGGGTAAGATGAAAAACCATTTTGACAAAACGATTCTATATAATTTTTTT
ATCTTCACAGAGTCGATACTATATTACTTGTATTTCCCTTTAGAAACTGT
TGATGTACCCAATCCGAGAGATGGAGAAGGTGAAGAAGGTGGGGGTACAA
TTCAGATGCTTGAAGGTATCATTACTCGTCACTTATTTGCGTGCATAACA
AAATTTGCTAGAAATGATGCAGTATTTATTTATGGAGAATGATTTTTACA
TATAAAATATTGAACTTGATTGCATTAAAATGATTGTCTTTTGCTGCCTT
TTGAACTTGATTTGGCCCAATCAAAATTGCAAGAAAACTTGAAAATTTGC
TTAACTTTAATCATGTTAACATTCACCTAAAGAATTCGTCATTTGTTATA
AGAGCGACCCACACATACTAAATATTGTAATTATAAGAATTTTACAAACT
ACTTCTATTTTCTTCGTAAGTATTTGCAAATCATTGTTAAAAGTTTTGTT
CATTTCACAGATGTAGAAGATTCGGATGCAGACTCGGATGACTGGAATAG
TGACGCGGATGAACCAAAACAAAAAGCAAGGAAAAGAAACGCAAAACGAA
ACAGGAGAACGTCAGCGCAACAAAAATCTACGAGAACGAAAGGTAAAGTC
TGTCTCAATATAATTACCAGTGGAGGCATGCTCAAAGATTTCTCAGCGAG
TAATTTTCACTTCATAGATTATACACTTAATTAAGTCTGTTTCAACGTAA
TTGGCAGTGGAAGCATCTCTAAGTATTTCTCAACGAATATTTTTCATCAA
ACGTAAATCTGAAAATGAAAATGAAAAATGAAGAAGAAAAAGAACTTTCC
ATCCTTTGGTGCTGGAAACTTCATTTTTATTACAGAGGGTACTTTGAACC
TTGCCGATTTCAAATATATGATTATTCTTCTCATAGCTATATTAGTTTAA
AAGTTACATATTAGGAGCGACCCACACTAATGGAGCTTCAAGTATTGTCA
TTCTAGGAATTTTTCAAATTATTTCTATTTTCTTTTAAAGTATATTGGCC
AACTATTTTTGAAACTTTTGTTTACTTTACAGATTTAGATGCAGATTCGG
ATGACTCGGTTAGTGACGCGGATGAACCAAAATGGAACCAGAAAAAGCCA
GCAAAACAAACCAAAAGAAAAGCCTCCAAAGGTAGTTATTTAATTTCCCC
TAGGGACTTTTGTTACTTCATGTAAAGGACGTGCTAGCTAGACAAATCTT
GTTGATGTTTTCTTCCAAAATAAGTAGTTTATTAGCTCGTATCTATGGAA
AGCAAGAAGTGACAATTCTTTCTTAAACAACGAAATCTATGCTTTTTTAA
TCTTAGCTGTCTGTTGTAGCATGGGTATAAGCTTAGCGGTGCTAATATTT
TTTTTCTCTGTTTTACAGGCAAAACCTGGTCGAATGACGAGAAAGAAGCT
GTCAGAAGACGGCTTAAAGATTTTTTTAAACTTAAGAAAGTGCCACGACA
AGGTGACATTCAACCGTGGCTAAAAGATGAACCAGCTTTGAAGAATCGTG
ATTGGAAAGCCGTGAAATTTCATGTCAATTGGGCTATTATTGCTGAAAAA
AGACAACTAGCGAAACAAAACACAAAAAAAAGATAATTAATCCTCAATCA
TTTTATTATATTAAGGTGGGTCATCACCTTCAGAATTAATTTTTCATGTT
TTTAAGTATTCCGTCGATAACTCTTGATGACGTAACATTTAGACAAAATT
TCACTTGAAAAACTAGTATTGGCTAACTACTACCTACTTGATAAAAAAAT
ACAGCCCTTAAAAGCTATAAAATAAGTCGATATGGGACCAACTATCCGAT
AAAATTTTTGAGTGAGATGGAAGCATCTTTTTTTAGCTAGGATATATGAT
CATGCTTTTTCTTTGTATATATAGTTTTCTATTTTTACCTCTTTATCTTC
CCAAGGGGGGGGGCAAGGAAGATATTGTGCGAGGAGATAACTAACATGAA
TGACTCCAGTGGAGTCCATGACAGATGTTGAATTCTATTATTTTTGTTAT
GTCTTCCTCGTGTCGTGGGGTTGATATTTTTTTCCTCAAACATTTTACTG
GGAAATGACAATACCTACTAAAATATTAACCAATCAGGATCAAGATTTTT
CCAGCGGGGAAGGGTAGAATTTTAAGTATATTTTCCAACAGGACAGTTTA
ATGGACTTATTTTCCAGTCTGTAAAATAGGGTTGGTTTTTATTTTCGATA
GCTTTATTTTCAGTAAATTTTGCCTTAGATAGTTCTCAATCTCTTCTTAG
GTTTTGACTTACGGGGCCACTGTTTTACACATGCCGACCCACTTGTATAT
AGCACATAGCCTACATGAAATATATCTCAGGGTCAACGGACTCATTCTGT
CTCCAATTCTTGTCTACCGGCCACTAATATTGGTTTCATTGATGAGATGT
TTAATGTGAATAAAATTTATGGAAGGCAAATATAAT

Coding sequence (CDS) from alignment at scaffold_126:28083..38468-

>TCONS_00047337 ID=TCONS_00047337|Name=TCONS_00047337|organism=Clytia hemisphaerica|type=CDS|length=816bp|location=Sequence derived from alignment at scaffold_126:28083..38468- (Clytia hemisphaerica)
ATGTTTATGTTTACGCCACCGTCAGCATCAGACTCACTCAAAAACGTCAT
GGAGAGAATGATTGTGGATGATGTTTCTCGATGTGTCAAAAGCGATTCAT
TGATCATTGAATACGGAAACAAGATGTGTCTAAGGTTGAGGATGGAAGGT
GACCAACAACATCATATCAGTAATAAAATGAGGGAATTGGCTCGACTTGT
CATCGAGACCAGGAAATGCTGTGACCAAGTCTCCTCTCTACAAGATGTCC
TTATGCCAAAGAATTTCAATTTTGTGATTGAAGCCGTGACAGAATTGGCA
GGATGGAACGAAGATGAAGGCTGCATGGAAACTCCCTCAATTGGTATCAA
ACTTGGGCATTCTCTTAAAAGGTGCTCCTTGATTTTGAAGGCAAGAGGAA
TAAGAGAAAACATCCATTCCTTAAAGAAGCAGGCAGATGAGTTTTGTGAA
CTCGTGAAACTCTCGTGGAACGACGAAATCTCACGTCTTGCACGAACAGA
GCTATACCGGAGAAAGTGGAATAAGCCAAAGCTGTTACCATTAACCTCTG
ACCTTCAAATTTTGGGAAATCATTTAAAAGAAACGATTACAACATCGCTG
AATGCTCTTGCCAATGACAACAATGACACTGCCAGTTATCGTGATTTGGA
AACATCCCTTCTAGCAAATATTATATTATTTAACAGAAGAAGATCCGGAG
AGCCTGCCAAAATGGAAGTAGCAAACTTTAAGACATTAACTGAAAAAGAA
AATCCCATGAACGACGAAGTTAAAGAAAGCCTTACTGAATTTGAAAGAAA
ACTATGTACGACATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030157XLOC_030157Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047337-exon-scaffold_126-1575043694:38409..38468TCONS_00047337-exon-scaffold_126-1575043694:38409..38468Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1575043694:37655..37708TCONS_00047337-exon-scaffold_126-1575043694:37655..37708Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1575043694:36898..36948TCONS_00047337-exon-scaffold_126-1575043694:36898..36948Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1575043694:36553..36585TCONS_00047337-exon-scaffold_126-1575043694:36553..36585Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1575043694:36309..36350TCONS_00047337-exon-scaffold_126-1575043694:36309..36350Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1575043694:36173..36223TCONS_00047337-exon-scaffold_126-1575043694:36173..36223Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1575043694:34632..34721TCONS_00047337-exon-scaffold_126-1575043694:34632..34721Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1575043694:34107..34205TCONS_00047337-exon-scaffold_126-1575043694:34107..34205Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1575043694:31549..33536TCONS_00047337-exon-scaffold_126-1575043694:31549..33536Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1575043694:30404..30475TCONS_00047337-exon-scaffold_126-1575043694:30404..30475Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1575043694:29927..30058TCONS_00047337-exon-scaffold_126-1575043694:29927..30058Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1575043694:29388..29486TCONS_00047337-exon-scaffold_126-1575043694:29388..29486Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1575043694:28083..29150TCONS_00047337-exon-scaffold_126-1575043694:28083..29150Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1510915933:38409..38468TCONS_00047337-exon-scaffold_126-1510915933:38409..38468Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1510915933:37655..37708TCONS_00047337-exon-scaffold_126-1510915933:37655..37708Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1510915933:36898..36948TCONS_00047337-exon-scaffold_126-1510915933:36898..36948Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1510915933:36553..36585TCONS_00047337-exon-scaffold_126-1510915933:36553..36585Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1510915933:36309..36350TCONS_00047337-exon-scaffold_126-1510915933:36309..36350Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1510915933:36173..36223TCONS_00047337-exon-scaffold_126-1510915933:36173..36223Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1510915933:34632..34721TCONS_00047337-exon-scaffold_126-1510915933:34632..34721Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1510915933:34107..34205TCONS_00047337-exon-scaffold_126-1510915933:34107..34205Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1510915933:31549..33536TCONS_00047337-exon-scaffold_126-1510915933:31549..33536Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1510915933:30404..30475TCONS_00047337-exon-scaffold_126-1510915933:30404..30475Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1510915933:29927..30058TCONS_00047337-exon-scaffold_126-1510915933:29927..30058Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1510915933:29388..29486TCONS_00047337-exon-scaffold_126-1510915933:29388..29486Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1510915933:28083..29150TCONS_00047337-exon-scaffold_126-1510915933:28083..29150Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1491911889:38409..38468TCONS_00047337-exon-scaffold_126-1491911889:38409..38468Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1491911889:37655..37708TCONS_00047337-exon-scaffold_126-1491911889:37655..37708Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1491911889:36898..36948TCONS_00047337-exon-scaffold_126-1491911889:36898..36948Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1491911889:36553..36585TCONS_00047337-exon-scaffold_126-1491911889:36553..36585Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1491911889:36309..36350TCONS_00047337-exon-scaffold_126-1491911889:36309..36350Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1491911889:36173..36223TCONS_00047337-exon-scaffold_126-1491911889:36173..36223Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1491911889:34632..34721TCONS_00047337-exon-scaffold_126-1491911889:34632..34721Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1491911889:34107..34205TCONS_00047337-exon-scaffold_126-1491911889:34107..34205Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1491911889:31549..33536TCONS_00047337-exon-scaffold_126-1491911889:31549..33536Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1491911889:30404..30475TCONS_00047337-exon-scaffold_126-1491911889:30404..30475Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1491911889:29927..30058TCONS_00047337-exon-scaffold_126-1491911889:29927..30058Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1491911889:29388..29486TCONS_00047337-exon-scaffold_126-1491911889:29388..29486Clytia hemisphaericaexon
TCONS_00047337-exon-scaffold_126-1491911889:28083..29150TCONS_00047337-exon-scaffold_126-1491911889:28083..29150Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047337-proteinTCONS_00047337-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_126supercontigscaffold_126:28083..38468 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	3.44468	0.321325	4.60328	3.43397	0.00470897	0.0853283	8.34575e-05	0.00499332	0.0284542	1.10352e-07	0	0.00595421	0	0	0	0	0	0	0	0	1.67368	2.11358	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047337 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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