TCONS_00047354 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047354
Unique NameTCONS_00047354
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2402

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047354 ID=TCONS_00047354|Name=TCONS_00047354|organism=Clytia hemisphaerica|type=transcript|length=2402bp
ATAAAACTTACATCTAGAATGGTTTTACATCAGTGAAAAATAGAATATTG
AAATGACTCATTTCGTTTGAAAAAGATTTGACcaagattttatgatttta
ggctCCGAGTATTCTGACAGTTGATATGCCAAAACAGCTCTGCGGTGGAG
TATGTTATCTTTTGAGTGACGTATTATTTATGCTTCAAACAAAGGATACA
GAGACATTGACATTTTAAGGGATTTATGTGAAACAATGTTTTAGCTAAAA
TatcaagcaaaaacaaaaaaaattatttttgatgctTAGTTCAGGGTTGT
GTTGTTGGCCTTTCAACATTAAGAATCTGAAAatgtatcttttgaaaatt
tttgtcgtcTCATTGTTGGTGTTTTACGTAACTTCTAAAACCATTGACGG
TTTAACGACTGGTGATGGTGATGGCACTGATAACGATGGTGGCAAAGACG
ATGATGGCAAAAAAGCTGGTTTAACAAAAGTTACTGGTGGCGGTACTGGT
GGAAATGATGGTGATGCCAAGAAAACAGtgAAGgatgataaaacaaagaa
agatgaaaagaaacCAAAAGAAGATGAAATGCAAAAGCGAGTGGATCAAT
ACAACAAAGCAACCAACAAATTTTGGGCAATGGAATGCACTGCTGGTAGT
AGGACGAAGGCGAAGGGAAATTCTTACGgtgTTATTGAGAAGCCAAGTGG
ATCAGCGACAAATGAAATTCAAGTGACATGCGCCCCTGGATATGATAGAT
CAACATGCCGTCTGCAGAAAGGGAAAAGACACACTCTCACTTTCAAATTC
CGTGCTTCAGATGAAATGAGTGGAGTGAAGGATATCACTTATCATTTTTG
TGGTATCATGTTTTTTAACGTATGTTTGGAGGACGGCTCAACCACACCTA
ATCTTTGCGATAAACAAATCGAATGTCCTTTGAAACCTGGCAAAGAATAC
GTTGTATCCGTCGATAAAGATATCCCTGGGTTTCCATTGTCAGTTGGAGC
TCAAATTTCGCTCAAATCAAGCAGTGGCACTTCTTTTGGATGCGTGAAAA
CTTCACTTCAATTCATCTGAGTATTTTTTTAATATGGATTTTAAATTTGT
ATAATAAAATATCGAATATTATTATTCacaagctacacgttttttttata
agaacatccaaaatttttgaagccttcggatgttcttaactttttgagtt
tcaagcctaaaatgttcgtagcatgttcttattttgaccattttgagagt
ttttttgtccattttcttaagaaaaaggGAGTTTTTGGGACCACAAAgcc
ttgttcttaacattttgaccatcgaagctttatgttcttatatagtttgt
tcttataaaaaacgtgtactgtaaAGCTGATGAAGATTTGGACTTCCAGA
AGTACATACTTGCATCACACTTCTTATACAGGGGAAAGGTTCTGTTTCAA
AACATGACTTTGTACAAGTAGAAAATATTTGTGTGTGATGCAAAGAAACT
TGAGGGTTAAAGCATGATAACTTTTTCGTCGAAAGATGCATACTAGCACa
tagatttttaataaaattggtTTTTTTTGATGACATAATCGATGACGCTA
TAAAATTTAGACTTGTATATCTCTgccagaatttttgaaaaaaggtattt
tttagAATTGCTTTCTTTTTATGggattatattttttggaaacaTTTCAG
TATGTTTTGATCATTACTTTTGAGATATACAAATTTTAAATTCTATGACA
GCACGAATCGTGACGTCACAAACCATAATTTTCCTAATTccttaaaaaat
gtcaaaaaattgattttattaacagtggatttcaagataTTGATCCTAAA
ATGGATCATGTATAAGGCTCCCAATTTCGATGGCATCTTAGGATATGTCA
TTAAGTTACACGAGTCTTTCATTCCCCTTAATTGAAATAGAAGGAAATTG
CTTCTAAAGGCCTTCAGAAATCTACTTTTCGATTTTAAACCGGGGCAAAT
TCAGATTCCGGCGATCGGAATGTTGGGTTTGCACTAGGAATGGGGAAACT
TTACCAGTTTATACAGTAAACGTGTATCATggattctttgatttttgaat
aAGTGAGAAAACGAGTTGAATTCACAATAAAATTCATTGAAAGTTTTTGA
GAGTTTTATGGCCAGATTAATTTATATATCATCCTATTTCAAATTATCCT
TAATTTCACTAATGaataatttctaattttttttttttaatatagacaat
gtaaaataatatataaaaatggcttgaaagaaattgataaaatttgacGA
AGCCAATTGAAGAGTCactctctttgaaaacttgtgaAGTACCATGACAA
AATTTATCATGAAAAGGTTGTTTAAACATGTTCATGATAACCCATAAATT
Ac
Run BLAST on NCBI

protein sequence of TCONS_00047354-protein

>TCONS_00047354-protein ID=TCONS_00047354-protein|Name=TCONS_00047354-protein|organism=Clytia hemisphaerica|type=polypeptide|length=262bp
MLSSGLCCWPFNIKNLKMYLLKIFVVSLLVFYVTSKTIDGLTTGDGDGTD
NDGGKDDDGKKAGLTKVTGGGTGGNDGDAKKTVKDDKTKKDEKKPKEDEM
QKRVDQYNKATNKFWAMECTAGSRTKAKGNSYGVIEKPSGSATNEIQVTC
APGYDRSTCRLQKGKRHTLTFKFRASDEMSGVKDITYHFCGIMFFNVCLE
DGSTTPNLCDKQIECPLKPGKEYVVSVDKDIPGFPLSVGAQISLKSSSGT
SFGCVKTSLQFI
Run BLAST on NCBI

transcript from alignment at scaffold_126:174952..183792-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047354 ID=TCONS_00047354|Name=TCONS_00047354|organism=Clytia hemisphaerica|type=transcript|length=8841bp|location=Sequence derived from alignment at scaffold_126:174952..183792- (Clytia hemisphaerica)
ATAAAACTTACATCTAGAATGGTTTTACATCAGTGAAAAATAGAATATTG
AAATGACTCATTTCGTTTGAAAAAGATTTGACCAAGATTTTATGATTTTA
GGCTCCGAGTATTCTGACAGTTGATATGCCAAAACAGCTCTGCGGTGGAG
TATGTTATCTTTTGAGTGACGTATTATTTATGCTTCAAACAAAGGATACA
GAGACATTGACATTTTAAGGGATTTATGTGAAACAATGTTTTAGCTAAAA
TATCAAGCAAAAACAAAAAAAATTATTTTTGATGCTTAGTTCAGGGTTGT
GTTGTTGGCCTTTCAACATTAAGAATCTGAAAATGTATCTTTTGAAAATT
TTTGTCGTCTCATTGTTGGTGTTTTACGTAACTTCTAAAACCATTGACGG
TACGTTGTACTTTTTCTTTACAGCGTGTATCCAGAAAAAAAATGGAGCAG
ATGTAAAATATAATCCTCAAAACTCATAATCACCCTAACGTCTAGAATAA
GACTGAGAGAAAATAATCTCATAAACAGATCATTCCTTCTATCAGCACCT
TGTTATGCTTGTACACCTATTTGCTCAAACCACGTTCTTTTTTCCAGACA
GCGAAAGTGAATGCATACATATATATGCATAGGTATATATACATCCAAAA
TCTTTGTGAAAAAACTTAAAACGGGCCACCAATCTTGCTAGATCCTTTTG
TGAATGTTGTGTAGTAATCAGGATCTGCTCGTAAGGTAAGTGGTTTACAT
GTGAAGATGTACGTATAGTCACAACACGTAAAAATGTTAAAACAGCAAGC
AACGGTAAAAAACTATTTGACTTGATGTACTTTCAACGGGCAATCTTCTT
TATAGGTTTAACGACTGGTGATGGTGATGGCACTGATAACGATGGTGGCA
AAGACGATGATGGCAAAAAAGCTGGTGAGTGTTATTTATTCACATTAAAG
ATATTTGTCAATTCCATCCAAATCTTTACTCTCGGGTACCTAATAGCCGG
GGGGCGCTAATTAATTTTTCGAAAATTTTCCACCCAGGTCACTCTTATTC
CAAACCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TTCCCAACCCCCCCCCCCCCGCTTATTGACTTTTGGGAACATTTTTTTGA
AAGTTCCCTCATTTGCCTTAATTCTGCTGTATTAGCTTCCTTTTCGAAAG
TTTTCCACCCAGGCCATTTTTATTCCAACCCCCCCCTTATTCCAAATTCC
CCGGCTATTAGGTGCCCAAGAGTAAGGAGATTAAGTTTATGCTACTATGG
GTACCGGTAGTATCAATTAAAAATATGCCTAAAATGGAAATTTATGTTCA
AGCTTGCGATATCCTTCAAAGCTTTGAAAAAACGTGCAAACCTATTTAAG
TAAAAATACTAATATTGTAAACATTTCATAATTATAGCTACTTATAGATT
CGAAGAAATCGTAATTTTTATTGTCAAAATGCCAAAAATGACCTTGTTTT
TGTTGACACAAGCAGTATTTGTATCTGAGCCCAGTGACTAAATGAGTTCA
GACGTTTGAATTCATTTGAAACCGACCTTAAAATGGCATAAATAATTCAT
AAACGTTTGAGGCCATTATTACTTTCAAATTTTGCACTTACAATCTCGGA
GAAAAGGTTGTACACTTTTCAAAAATACATGAAAAATTTCAAAATAAGCT
CCGAAAACCCAATTTTACCAGGGACAATGTTGTTTTTATTGGATTCGGAG
AGTTTAGGTGACAATTCCAGATACCAAAGCCACTAGACATTTTAAAGGAA
ATGAATTTTTGCCAAGTCTTCAGGCTATTTTGTCTGAGATTGAAGATCGA
AGATTTAATGAGTTTTGCTCTTCAACTTTTTCGAGAATACATCTATTAGA
ACATATTTGAGATTGTTTAATCAATTCTAAACAACTTTTCAAAGCAGAGA
TGAACCCACCACCTGGTGTGGCTGAAGTTCACCCATTTTCAGTCACTTTC
AGTCTTTGGAAGTCTAAAATTCACAAGGACTGCTTAGATGTCTTCTGCCA
AATAACCACTTGTGGTTCATTTGGGGAATTTCCCAAGGGTCAGAAAGGCT
TTTCTTGGCACTATTGATGAATTTTTGAAAATGATTGTACCTTGTTTTTT
CAATGATATTTTCAAAAAAATCGATTTTCACGTACATCCTGAAAACAGTA
TCAACTCTTTCCAATAATGAACGGTTTCTTCTTGTTGCAGGTTTAACAAA
AGTTACTGGTGGCGGTACTGGTGGAAATGATGGTGATGCCAAGAAAACAG
GTACAGCATATGTAATATTCTTCAATTTCAGAAACTTCCACTTTGAAGCC
TGGGGGGGCAATCAAACTCGGATTTGGAGGGGTTTTCTAGATTTCAGGGA
ACATCAATTCTAATATCTAGAGATACCGAAACATCTGCAGGTTCTCATTC
AATATTTCATAATTTGTTTTTCAAAAAATCAAAACAGTGAAGGATGATAA
AACAAAGAAAGATGAAAAGAAACCAAAAGAAGATGAAATGCAAAAGCGAG
TGGATCAATACAACAAAGCAACCAACAAATTTTGGGCAATGGAATGCACT
GCTGGTAGTAGGACGAAGGCGAAGGGAAATTCTTACGGTAAACATTTTAA
ACTCGGAATTCTTGTATAAAGGTCACAGCCTCTCATCCTCAATCCCAAGA
CTAACTTCTTTGGAGTTCTTATTTGGATGTTATGCATGCAATGAGTCTTG
GACCTAGTCTCCTCTCTTCAATAGGTTACGTAATCCCGAAAGGCTTATGT
CATATTTCTTATAATTAAGCCAGGGGATGTGGTATCGTCATCTTCACATC
AGACAGTAGCGTAGACAAGGGTGAAGGAAAATTTGCTTAGCCNAGTTCTT
ATTTGGATGTTATGCATGCAATGAGTCTTGGACCTAGTCTCCTCTCTTGA
ATAGGTTACGTAATCCCGAAAGGCTTATGTCATATTTCTTATAATTAAGC
CAAGGGATGTGGTATTGTGAGTCTTCACATCAGACAGTAGCGTAGACAGG
GGTAAAGGAACATTTGCTTAGCAGGCTTTAAACTCAATGACTACAAGTAG
CATTGGTGGGACTTGTTCGGACAATAACATTTTATTGTCTTTAATCGTAT
CAACATTGAAAAATTTATATTATTTCGGTTATAAGTTTATTCAAACTCAA
TTTCTCACTCAATTTTTACATTTTCAATTAAGTTCTTCAAGTAAGTATGA
GTGAGAGGCTATTGTATAAATTTTGGACGCAATCCGAATTCTAGCATGAT
TCTTATCTGTTATATTGCGGTTTGCGCCAGAGAAATGAAGCCCTTGTTAC
TACTGATGATGTCTTCGTCGATAGGATGTGTTTTGAAGATTAAAGTGGTG
CGTCGAATTGGTTGAAAATTGTGCAATCAGGCGTTTATGACCAGTTTCTA
AGGCTATCTTACTGCTTGCTCTATTGCGCAATTTTTAACCTACCTTGTAA
AATGTAAAATGGCAATACCCAAAATGTGACGGAGCCTGGTTTTCGAGAAA
AACATTTTTTGGGCAAATTTGGGCCTAAAACTGCCATATTTGTATATGAT
TTTAGCTCCCAATGTGCGCTCAAAAGTCTCAAACTCTCAAATTGATCATT
TTTCGCAAGTCTAAAAAAGTAAGAATACGCCAACAATGTTTCACTCTCAA
TTTTGGCAATTTCTTAAGAATACTTATCCCTCATCCCAAATATTCTTATA
AAAAAGTAACTTGTTACTTTTATTTTTTCCAAAGGTGTTATTGAGAAGCC
AAGTGGATCAGCGACAAATGAAATTCAAGTGACATGCGCCCCTGGATATG
ATAGATCAACATGCCGTCTGCAGAAAGGGAAAAGACACACTCTCACTTTC
AAATTCCGTGCTTCAGATGAAATGAGTAAGGTTTAGAAAGAATGTGAAAA
ATATTTGAACGCCTTGAATGTATTTTACTTTAGTTTCTCATGCTACAACA
TTTCCACTTTTCGGGACTATTTCAGTGTAGTTTCTGGAGAAATTTCATGT
TCGACAGTCTCTATCGGAATACTCCTAAGATGACTGCGTGAGACGTGAGA
CGGAAGATGTCTAAATTTCGTCCGACAGGGCTCAACTTTTGTCAGTTAAT
GTCAATGTATCGACAAACTTCCGTCAAACAGGGTTAATTCTTGTTAGAAA
TAGTTGCTGGCGGAACATTTTTCAAATTCCAACGGCAAGTTGCGGCCTCC
ACCAAAGCCAATACCCCCCCTCGATAAAATGACTTATCCAAGCATACTTC
AGGTTGACCCACGAGAAACTTCGTATTATTTTAGATTTTAGATTTAATTC
AAATTTCAATTTCAGTTCAATTACTTTTTAAATTCAAAACTTGGTCCCTT
AACATACAAGCTTAGTTTAAAATCACATTTAGTGTAAAAAAGGGTATCAA
TTTTTTTGCATTGATCTTTTGTCAGGTGGAGTGAAGGATATCACTTATCA
TTTTTGTGGTATCATGTTTTTTAACGTATGTTTGGAGGACGGCTCAACCA
CACCTAATCTTTGCGATAAACAAATCGAATGTCCTTTGAAACCTGGCAAA
GAATACGTTGTATCCGTCGATAAAGATATCCCTGGGGTATGTATTTTTCT
TTCTCTGACAATACACTCTTCTCAGCCCGGGGCCACTTATAGCTTTTTGA
TGGACTGGATAGCGCTGATAAGTGGCACGGTGTAATTTGACAGGCTCCAT
TCTTTGGCTTTGCTAGAGGTGGTGTAGCCTGGGTATCTAGACTCAAAATT
TCGAAAAAATATCCTTACCTCAACATACAAAGTTTGTAAAATTGTCTGGT
GCAACTAAAAAGTCTGGTACGGTTTTTTTGATACTGCCTGTGAGTGAACC
CTTGTTGATAGAATAGCAAAACTTTGGAAACTCAGGCAAACACACATAAT
TAACTTACGATAAAACCTCCTTTACAGCGGCCATTTTGTTTTAGAAATGA
ACCTGTGTTTTCATTTTCATTTATCTTTTTTCGCAAGTTAAACTTTTTTC
ATGAATTATGCGCGCGCGTAGAAAAATATCGAAAACCCCGTGAAATTTCT
GCCCAGTGACTCGGCGGGAATCGAACAAACAGATGCACTCGAATATACAG
GGACAAATATCCCTGCAGACGAATTTTAGTTGAACCAGACCTAGCAAGTC
CATACCTAGGCTGCTGGCATACACTAACGGATTCGTGCTCCTTATATTGT
CTGTGGTTCTCAACTTCAGTTGAGAATGTCTGTCTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTCTGTCTGTCTGTCACAAAAACTTTAGGGCAGCCTGTA
GACTTCAAAAATGCTTGGATTTGGCTGAAATTTTGCACACTTGTTCCTTG
GGTGAATATCTGGGGATTTTTTTTCTTTTTTTGAAAATTTTGATTTTTGG
GGCCTGGGGACGAGTTTTTCGCCAAAACGAGGCTAAAACTTTAGGGCAGC
CTGGAGACTTCAAAAATGCTTGGATTTGGCTGAAATTTTGCACACTTGTT
CCTTGGGTGAATATCTGGGGGTATTTCTTTCTTTTTTTGAAAATTTTGAT
TTTTAGGGCCTAGGGACGATTTTTTCGCCAAAACGAGGCTAAAACTTTAG
GGTAGCCTGGAGACTTCAAAAATGCTTGGATTTGGCTAAAATTTTGCACA
CTTGTTCCTCTGGTGAATATCTGGGGGTGTTTTTTTCTTTTTTTGAAAGT
TTTGATTTTTGGGGCCTGGGGATGAGTTTTTCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNAAAGACCCACTAGATCAAAAGTTAAG
GGGTGGTACAGGAAAAGCCCCCCCCCCTAGTTCTGAACCGCCCCTAAAAG
CCTAGGTTGAATAGGGTTAAAATACATTTTTTGGCGTTTTTATATGATTT
TCGAAAAAAATTTCAGTCGGAAGTATACTACAAATACAAGTATTTTTGCC
AAGATCATTAATCATAACCGGCGTTTGTGATTATGTACTAAATTGAATAA
AATAAAATTGCAAATTCTGATATTTCTTTCTACCCATCGGCTTTGTTCTA
TTTTTGGAAACATTAACTGCTAATCCAGAGAATCTGTTTTTCTTTATCAC
CCGACACGCGGCTGAGTTTTTTTGTTTTTTTTTTGGGGGGGGACTCCTCT
GATTACCAATATTTCAGTTGGTCATTTTTGTGATATAAGGTGTAAATTAT
ATGTCTGTCTCTTTTTTAGTTTCCATTGTCAGTTGGAGCTCAAATTTCGC
TCAAATCAAGCAGTGGCACTTCTTTTGGATGCGTGAAAACTTCACTTCAA
TTCATCTGAGTATTTTTTTAATATGGATTTTAAATTTGTATAATAAAATA
TCGAATATTATTATTCACAAGCTACACGTTTTTTTTATAAGAACATCCAA
AATTTTTGAAGCCTTCGGATGTTCTTAACTTTTTGAGTTTCAAGCCTAAA
ATGTTCGTAGCATGTTCTTATTTTGACCATTTTGAGAGTTTTTTTGTCCA
TTTTCTTAAGAAAAAGGGAGTTTTTGGGACCACAAAGCCTTGTTCTTAAC
ATTTTGACCATCGAAGCTTTATGTTCTTATATAGTTTGTTCTTATAAAAA
ACGTGTACTGTAAAGCTGATGAAGATTTGGACTTCCAGAAGTACATACTT
GCATCACACTTCTTATACAGGGGAAAGGTTCTGTTTCAAAACATGACTTT
GTACAAGTAGAAAATATTTGTGTGTGATGCAAAGAAACTTGAGGGTTAAA
GCATGATAACTTTTTCGTCGAAAGATGCATACTAGCACATAGATTTTTAA
TAAAATTGGTTTTTTTTGATGACATAATCGATGACGCTATAAAATTTAGA
CTTGTATATCTCTGCCAGAATTTTTGAAAAAAGGTATTTTTTAGAATTGC
TTTCTTTTTATGGGATTATATTTTTTGGAAACATTTCAGTATGTTTTGAT
CATTACTTTTGAGATATACAAATTTTAAATTCTATGACAGCACGAATCGT
GACGTCACAAACCATAATTTTCCTAATTCCTTAAAAAATGTCAAAAAATT
GATTTTATTAACAGTGGATTTCAAGATATTGATCCTAAAATGGATCATGT
ATAAGGCTCCCAATTTCGATGGCATCTTAGGATATGTCATTAAGTTACAC
GAGTCTTTCATTCCCCTTAATTGAAATAGAAGGAAATTGCTTCTAAAGGC
CTTCAGAAATCTACTTTTCGATTTTAAACCGGGGCAAATTCAGATTCCGG
CGATCGGAATGTTGGGTTTGCACTAGGAATGGGGAAACTTTACCAGTTTA
TACAGTAAACGTGTATCATGGATTCTTTGATTTTTGAATAAGTGAGAAAA
CGAGTTGAATTCACAATAAAATTCATTGAAAGTTTTTGAGAGTTTTATGG
CCAGATTAATTTATATATCATCCTATTTCAAATTATCCTTAATTTCACTA
ATGAATAATTTCTAATTTTTTTTTTTTAATATAGACAATGTAAAATAATA
TATAAAAATGGCTTGAAAGAAATTGATAAAATTTGACGAAGCCAATTGAA
GAGTCACTCTCTTTGAAAACTTGTGAAGTACCATGACAAAATTTATCATG
AAAAGGTTGTTTAAACATGTTCATGATAACCCATAAATTAC

Coding sequence (CDS) from alignment at scaffold_126:174952..183792-

>TCONS_00047354 ID=TCONS_00047354|Name=TCONS_00047354|organism=Clytia hemisphaerica|type=CDS|length=5523bp|location=Sequence derived from alignment at scaffold_126:174952..183792- (Clytia hemisphaerica)
TTTCCATTGTCAGTTGGAGCTCAAATTTCGCTCAAATCAAGCAGTGGCAC
TTCTTTTGGATGCGTGAAAACTTCACTTCAATTCATCTGAGTGGAGTGAA
GGATATCACTTATCATTTTTGTGGTATCATGTTTTTTAACGTATGTTTGG
AGGACGGCTCAACCACACCTAATCTTTGCGATAAACAAATCGAATGTCCT
TTGAAACCTGGCAAAGAATACGTTGTATCCGTCGATAAAGATATCCCTGG
GGTGTTATTGAGAAGCCAAGTGGATCAGCGACAAATGAAATTCAAGTGAC
ATGCGCCCCTGGATATGATAGATCAACATGCCGTCTGCAGAAAGGGAAAA
GACACACTCTCACTTTCAAATTCCGTGCTTCAGATGAAATGATGAAGGAT
GATAAAACAAAGAAAGATGAAAAGAAACCAAAAGAAGATGAAATGCAAAA
GCGAGTGGATCAATACAACAAAGCAACCAACAAATTTTGGGCAATGGAAT
GCACTGCTGGTAGTAGGACGAAGGCGAAGGGAAATTCTTACGGTTTAACA
AAAGTTACTGGTGGCGGTACTGGTGGAAATGATGGTGATGCCAAGAAAAC
AGGTTTAACGACTGGTGATGGTGATGGCACTGATAACGATGGTGGCAAAG
ACGATGATGGCAAAAAAGCTGATGCTTAGTTCAGGGTTGTGTTGTTGGCC
TTTCAACATTAAGAATCTGAAAATGTATCTTTTGAAAATTTTTGTCGTCT
CATTGTTGGTGTTTTACGTAACTTCTAAAACCATTGACGTTTCCATTGTC
AGTTGGAGCTCAAATTTCGCTCAAATCAAGCAGTGGCACTTCTTTTGGAT
GCGTGAAAACTTCACTTCAATTCATCTGAGTGGAGTGAAGGATATCACTT
ATCATTTTTGTGGTATCATGTTTTTTAACGTATGTTTGGAGGACGGCTCA
ACCACACCTAATCTTTGCGATAAACAAATCGAATGTCCTTTGAAACCTGG
CAAAGAATACGTTGTATCCGTCGATAAAGATATCCCTGGGGTGTTATTGA
GAAGCCAAGTGGATCAGCGACAAATGAAATTCAAGTGACATGCGCCCCTG
GATATGATAGATCAACATGCCGTCTGCAGAAAGGGAAAAGACACACTCTC
ACTTTCAAATTCCGTGCTTCAGATGAAATGATGAAGGATGATAAAACAAA
GAAAGATGAAAAGAAACCAAAAGAAGATGAAATGCAAAAGCGAGTGGATC
AATACAACAAAGCAACCAACAAATTTTGGGCAATGGAATGCACTGCTGGT
AGTAGGACGAAGGCGAAGGGAAATTCTTACGGTTTAACAAAAGTTACTGG
TGGCGGTACTGGTGGAAATGATGGTGATGCCAAGAAAACAGGTTTAACGA
CTGGTGATGGTGATGGCACTGATAACGATGGTGGCAAAGACGATGATGGC
AAAAAAGCTGATGCTTAGTTCAGGGTTGTGTTGTTGGCCTTTCAACATTA
AGAATCTGAAAATGTATCTTTTGAAAATTTTTGTCGTCTCATTGTTGGTG
TTTTACGTAACTTCTAAAACCATTGACGTTTCCATTGTCAGTTGGAGCTC
AAATTTCGCTCAAATCAAGCAGTGGCACTTCTTTTGGATGCGTGAAAACT
TCACTTCAATTCATCTGAGTGGAGTGAAGGATATCACTTATCATTTTTGT
GGTATCATGTTTTTTAACGTATGTTTGGAGGACGGCTCAACCACACCTAA
TCTTTGCGATAAACAAATCGAATGTCCTTTGAAACCTGGCAAAGAATACG
TTGTATCCGTCGATAAAGATATCCCTGGGGTGTTATTGAGAAGCCAAGTG
GATCAGCGACAAATGAAATTCAAGTGACATGCGCCCCTGGATATGATAGA
TCAACATGCCGTCTGCAGAAAGGGAAAAGACACACTCTCACTTTCAAATT
CCGTGCTTCAGATGAAATGATGAAGGATGATAAAACAAAGAAAGATGAAA
AGAAACCAAAAGAAGATGAAATGCAAAAGCGAGTGGATCAATACAACAAA
GCAACCAACAAATTTTGGGCAATGGAATGCACTGCTGGTAGTAGGACGAA
GGCGAAGGGAAATTCTTACGGTTTAACAAAAGTTACTGGTGGCGGTACTG
GTGGAAATGATGGTGATGCCAAGAAAACAGGTTTAACGACTGGTGATGGT
GATGGCACTGATAACGATGGTGGCAAAGACGATGATGGCAAAAAAGCTGA
TGCTTAGTTCAGGGTTGTGTTGTTGGCCTTTCAACATTAAGAATCTGAAA
ATGTATCTTTTGAAAATTTTTGTCGTCTCATTGTTGGTGTTTTACGTAAC
TTCTAAAACCATTGACGTTTCCATTGTCAGTTGGAGCTCAAATTTCGCTC
AAATCAAGCAGTGGCACTTCTTTTGGATGCGTGAAAACTTCACTTCAATT
CATCTGAGTGGAGTGAAGGATATCACTTATCATTTTTGTGGTATCATGTT
TTTTAACGTATGTTTGGAGGACGGCTCAACCACACCTAATCTTTGCGATA
AACAAATCGAATGTCCTTTGAAACCTGGCAAAGAATACGTTGTATCCGTC
GATAAAGATATCCCTGGGGTGTTATTGAGAAGCCAAGTGGATCAGCGACA
AATGAAATTCAAGTGACATGCGCCCCTGGATATGATAGATCAACATGCCG
TCTGCAGAAAGGGAAAAGACACACTCTCACTTTCAAATTCCGTGCTTCAG
ATGAAATGATGAAGGATGATAAAACAAAGAAAGATGAAAAGAAACCAAAA
GAAGATGAAATGCAAAAGCGAGTGGATCAATACAACAAAGCAACCAACAA
ATTTTGGGCAATGGAATGCACTGCTGGTAGTAGGACGAAGGCGAAGGGAA
ATTCTTACGGTTTAACAAAAGTTACTGGTGGCGGTACTGGTGGAAATGAT
GGTGATGCCAAGAAAACAGGTTTAACGACTGGTGATGGTGATGGCACTGA
TAACGATGGTGGCAAAGACGATGATGGCAAAAAAGCTGATGCTTAGTTCA
GGGTTGTGTTGTTGGCCTTTCAACATTAAGAATCTGAAAATGTATCTTTT
GAAAATTTTTGTCGTCTCATTGTTGGTGTTTTACGTAACTTCTAAAACCA
TTGACGTTTCCATTGTCAGTTGGAGCTCAAATTTCGCTCAAATCAAGCAG
TGGCACTTCTTTTGGATGCGTGAAAACTTCACTTCAATTCATCTGAGTGG
AGTGAAGGATATCACTTATCATTTTTGTGGTATCATGTTTTTTAACGTAT
GTTTGGAGGACGGCTCAACCACACCTAATCTTTGCGATAAACAAATCGAA
TGTCCTTTGAAACCTGGCAAAGAATACGTTGTATCCGTCGATAAAGATAT
CCCTGGGGTGTTATTGAGAAGCCAAGTGGATCAGCGACAAATGAAATTCA
AGTGACATGCGCCCCTGGATATGATAGATCAACATGCCGTCTGCAGAAAG
GGAAAAGACACACTCTCACTTTCAAATTCCGTGCTTCAGATGAAATGATG
AAGGATGATAAAACAAAGAAAGATGAAAAGAAACCAAAAGAAGATGAAAT
GCAAAAGCGAGTGGATCAATACAACAAAGCAACCAACAAATTTTGGGCAA
TGGAATGCACTGCTGGTAGTAGGACGAAGGCGAAGGGAAATTCTTACGGT
TTAACAAAAGTTACTGGTGGCGGTACTGGTGGAAATGATGGTGATGCCAA
GAAAACAGGTTTAACGACTGGTGATGGTGATGGCACTGATAACGATGGTG
GCAAAGACGATGATGGCAAAAAAGCTGATGCTTAGTTCAGGGTTGTGTTG
TTGGCCTTTCAACATTAAGAATCTGAAAATGTATCTTTTGAAAATTTTTG
TCGTCTCATTGTTGGTGTTTTACGTAACTTCTAAAACCATTGACGTTTCC
ATTGTCAGTTGGAGCTCAAATTTCGCTCAAATCAAGCAGTGGCACTTCTT
TTGGATGCGTGAAAACTTCACTTCAATTCATCTGAGTGGAGTGAAGGATA
TCACTTATCATTTTTGTGGTATCATGTTTTTTAACGTATGTTTGGAGGAC
GGCTCAACCACACCTAATCTTTGCGATAAACAAATCGAATGTCCTTTGAA
ACCTGGCAAAGAATACGTTGTATCCGTCGATAAAGATATCCCTGGGGTGT
TATTGAGAAGCCAAGTGGATCAGCGACAAATGAAATTCAAGTGACATGCG
CCCCTGGATATGATAGATCAACATGCCGTCTGCAGAAAGGGAAAAGACAC
ACTCTCACTTTCAAATTCCGTGCTTCAGATGAAATGATGAAGGATGATAA
AACAAAGAAAGATGAAAAGAAACCAAAAGAAGATGAAATGCAAAAGCGAG
TGGATCAATACAACAAAGCAACCAACAAATTTTGGGCAATGGAATGCACT
GCTGGTAGTAGGACGAAGGCGAAGGGAAATTCTTACGGTTTAACAAAAGT
TACTGGTGGCGGTACTGGTGGAAATGATGGTGATGCCAAGAAAACAGGTT
TAACGACTGGTGATGGTGATGGCACTGATAACGATGGTGGCAAAGACGAT
GATGGCAAAAAAGCTGATGCTTAGTTCAGGGTTGTGTTGTTGGCCTTTCA
ACATTAAGAATCTGAAAATGTATCTTTTGAAAATTTTTGTCGTCTCATTG
TTGGTGTTTTACGTAACTTCTAAAACCATTGACGTTTCCATTGTCAGTTG
GAGCTCAAATTTCGCTCAAATCAAGCAGTGGCACTTCTTTTGGATGCGTG
AAAACTTCACTTCAATTCATCTGAGTGGAGTGAAGGATATCACTTATCAT
TTTTGTGGTATCATGTTTTTTAACGTATGTTTGGAGGACGGCTCAACCAC
ACCTAATCTTTGCGATAAACAAATCGAATGTCCTTTGAAACCTGGCAAAG
AATACGTTGTATCCGTCGATAAAGATATCCCTGGGGTGTTATTGAGAAGC
CAAGTGGATCAGCGACAAATGAAATTCAAGTGACATGCGCCCCTGGATAT
GATAGATCAACATGCCGTCTGCAGAAAGGGAAAAGACACACTCTCACTTT
CAAATTCCGTGCTTCAGATGAAATGATGAAGGATGATAAAACAAAGAAAG
ATGAAAAGAAACCAAAAGAAGATGAAATGCAAAAGCGAGTGGATCAATAC
AACAAAGCAACCAACAAATTTTGGGCAATGGAATGCACTGCTGGTAGTAG
GACGAAGGCGAAGGGAAATTCTTACGGTTTAACAAAAGTTACTGGTGGCG
GTACTGGTGGAAATGATGGTGATGCCAAGAAAACAGGTTTAACGACTGGT
GATGGTGATGGCACTGATAACGATGGTGGCAAAGACGATGATGGCAAAAA
AGCTGATGCTTAGTTCAGGGTTGTGTTGTTGGCCTTTCAACATTAAGAAT
CTGAAAATGTATCTTTTGAAAATTTTTGTCGTCTCATTGTTGGTGTTTTA
CGTAACTTCTAAAACCATTGACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030164XLOC_030164Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047354-proteinTCONS_00047354-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047354-exon-scaffold_126-1575043694:183394..183792TCONS_00047354-exon-scaffold_126-1575043694:183394..183792Clytia hemisphaericaexon
TCONS_00047354-exon-scaffold_126-1575043694:182869..182937TCONS_00047354-exon-scaffold_126-1575043694:182869..182937Clytia hemisphaericaexon
TCONS_00047354-exon-scaffold_126-1575043694:181343..181402TCONS_00047354-exon-scaffold_126-1575043694:181343..181402Clytia hemisphaericaexon
TCONS_00047354-exon-scaffold_126-1575043694:181006..181155TCONS_00047354-exon-scaffold_126-1575043694:181006..181155Clytia hemisphaericaexon
TCONS_00047354-exon-scaffold_126-1575043694:179718..179858TCONS_00047354-exon-scaffold_126-1575043694:179718..179858Clytia hemisphaericaexon
TCONS_00047354-exon-scaffold_126-1575043694:179007..179167TCONS_00047354-exon-scaffold_126-1575043694:179007..179167Clytia hemisphaericaexon
TCONS_00047354-exon-scaffold_126-1575043694:174952..176373TCONS_00047354-exon-scaffold_126-1575043694:174952..176373Clytia hemisphaericaexon
TCONS_00047354-exon-scaffold_126-1510915933:183394..183792TCONS_00047354-exon-scaffold_126-1510915933:183394..183792Clytia hemisphaericaexon
TCONS_00047354-exon-scaffold_126-1510915933:182869..182937TCONS_00047354-exon-scaffold_126-1510915933:182869..182937Clytia hemisphaericaexon
TCONS_00047354-exon-scaffold_126-1510915933:181343..181402TCONS_00047354-exon-scaffold_126-1510915933:181343..181402Clytia hemisphaericaexon
TCONS_00047354-exon-scaffold_126-1510915933:181006..181155TCONS_00047354-exon-scaffold_126-1510915933:181006..181155Clytia hemisphaericaexon
TCONS_00047354-exon-scaffold_126-1510915933:179718..179858TCONS_00047354-exon-scaffold_126-1510915933:179718..179858Clytia hemisphaericaexon
TCONS_00047354-exon-scaffold_126-1510915933:179007..179167TCONS_00047354-exon-scaffold_126-1510915933:179007..179167Clytia hemisphaericaexon
TCONS_00047354-exon-scaffold_126-1510915933:174952..176373TCONS_00047354-exon-scaffold_126-1510915933:174952..176373Clytia hemisphaericaexon
TCONS_00047354-exon-scaffold_126-1491911889:183394..183792TCONS_00047354-exon-scaffold_126-1491911889:183394..183792Clytia hemisphaericaexon
TCONS_00047354-exon-scaffold_126-1491911889:182869..182937TCONS_00047354-exon-scaffold_126-1491911889:182869..182937Clytia hemisphaericaexon
TCONS_00047354-exon-scaffold_126-1491911889:181343..181402TCONS_00047354-exon-scaffold_126-1491911889:181343..181402Clytia hemisphaericaexon
TCONS_00047354-exon-scaffold_126-1491911889:181006..181155TCONS_00047354-exon-scaffold_126-1491911889:181006..181155Clytia hemisphaericaexon
TCONS_00047354-exon-scaffold_126-1491911889:179718..179858TCONS_00047354-exon-scaffold_126-1491911889:179718..179858Clytia hemisphaericaexon
TCONS_00047354-exon-scaffold_126-1491911889:179007..179167TCONS_00047354-exon-scaffold_126-1491911889:179007..179167Clytia hemisphaericaexon
TCONS_00047354-exon-scaffold_126-1491911889:174952..176373TCONS_00047354-exon-scaffold_126-1491911889:174952..176373Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_126supercontigscaffold_126:174952..183792 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.691309	0.743276	0.555433	0.247715	1.30579	1.0614	41.1414	39.6679	53.5433	49.1753	66.9247	44.1758	39.6728	40.5989	28.9255	29.9382	27.0611	31.9862	72.9262	87.4654	37.7147	37.6133	21.0646	22.9233	37.4077	39.2235	8.98793	9.89025	138.539	154.322
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003172ML_dom
IPR014756Ig_E-set
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047354 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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