TCONS_00047379 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047379
Unique NameTCONS_00047379
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1209

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047379 ID=TCONS_00047379|Name=TCONS_00047379|organism=Clytia hemisphaerica|type=transcript|length=1209bp
tttcgattgcatttagaTACTAATAGAGAAAAGAGACTCCAGATTGAACT
CTCCCTAGTGTAGGGGAaagaacgaagaagaaaattgcaatttcatttca
aaccaaGAATCAAAAAGGAAAGACAAAATAAACCTAACTTAACATTGTAG
CAGAATTATAGTTTTGTTGGAAAGATACAACCAAGTGGAACGCAATGAAT
TCATCTTGGAACACACAATTTCTTATGGCAGCGGTTTTGATTGGACTGGT
TATGGCTGAGGTGCGCACAGACGAAACGGAAGCGAGTAATGATGAAATGT
CCAAAAGATCAGAGCTACCTGTCGGTTTGATAAACGTCAAACATTTTGGA
AAGGAAAATGGATATGCTAAAAAAGATATTCCAATGagatttttgagcaa
aaaagaTATCCCGATGcgatttctgagcaaaaaagatATTCCAATGCGAT
TTCTGAGCAAGAGAGAAAATGAAGAGGACATTCCAATGAGATTTTTATCC
AAACGAGGAGAGCTCCCAATGCGCTTTCTAGCAAAGAAGGATGATGAGAA
AAACAGCGAAGAAGAGctgCCGATGCGATTCCTTCAGAAACGATCACAAG
AGAAACTGTGCAAACGGGTTGTCGATATTTGTTCGAACGTTCTCGATCAA
AAGCGCTGATCCTCTCAAGACAAACCATCGACCATGTAACAAAATAATCG
AACCCTATAAACATTATGGACCAACAAATACATGATTTGGATAAAttgcc
agaaaatgaaaaactgtttTGGCTAAACAATTTCCTTTTTGAtgtaaatt
tgtaaatagtGACATGGACTAAATTGATAGGCTTTACTCTAAATTTGTac
catcataaaaaaaacaaccatgCTTATACTGTAAAATAGCCTAAAGTACT
TCACCTATTCAATGCGTATTTAAAAAGGTTCACTTTATTTTAAAAGTCTT
GGaatcttttcaaaagaattttcgacaaaattaTAATTTAGGAACAATAA
GAATACTTAATGTAACAAATTTATTACACAAAAATCATATTAAAGAAATA
ATTATTGATTCAAGGATAAAAGTATAGAAAATATTATCTTTATTTAGGAA
GTCTCTTGAGGAAAAAGTTTGAATCTCCCGGAATGTAGAATACCTAGATT
GCTCGAAAACTTATATTATGTGCACCATTACATGGATGCCGAACTCCAAA
GATAGGGCA
Run BLAST on NCBI

transcript from alignment at scaffold_127:80702..94508+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047379 ID=TCONS_00047379|Name=TCONS_00047379|organism=Clytia hemisphaerica|type=transcript|length=13807bp|location=Sequence derived from alignment at scaffold_127:80702..94508+ (Clytia hemisphaerica)
tttcgattgcatttagaTACTAATAGAGAAAAGAGACTCCAGATTGAACT
CTCCCTAGTGTAGGGGAaagaacgaagaagaaaattgcaatttcatttca
aaccaaGAATCAAAAAGGAAAGACAAAATAAACCTAACTTAACATTGTAG
CAGAATTATAGTTTTGTTGGAAAGATACAACCAAGTGGAACGCAATGAAT
TCATCTTGGAACACACAATTTCTTATGGCAGCGGTTTTGATTGGACTGGT
TATGGCTGAGGTGCGCACAGACGAAACGGAAGCGGTATGAAACTCATTTC
TTGTTATTAAATTCGATTTCCGAAGCCTTTAAACTGATATCCGAATAATT
ATCTCACTTTTAGCCAAAACTCGAGgagagtttttttctgaaatagcCGG
CTTACCTGTTAAATTTTGGTATGGACAAAGTTCAATCCTAGCAAATAAGA
AAGGAAACAATGGAAGGGTAATCCCGCCAATGCGGACGGCATGGATCCTA
TTCCGAGATATTTACCTATTCTAGAGGAGGGAAATCATAGCATTTGCCAG
ACGCCTTTGACCCTGTGCTCGCGACGTAACAGAGCCATAATTTACCAATT
GAATTACAGCGCCGAGTGAGATTCAAACTCTTGTCTTACACGTGAGAGTG
GAGAATGTTACCACTACACTGACGACATTCTGACGTTACGCCCCACGCCC
CACGCCCCACTACGCCCGAAATAGGACAAGTATTCCATTAAATCTCGGAG
TAAAACTTTGCGGAGCTACATCCTACAATCCGTTGTCGATGTCATCAATC
ACATCTCTACATCCACTTcccttttaaaaaatattaggaAAATCAAAGTA
CAGTTGACACTCCCTGGTTGGAGTTTtcaggggaattggattttcatcga
ataagaaaGCGTTCGTGTTAGCATTACCATTCGCACAGCCTCGTTTTATA
ATCGAAATTTTGTATCGAacagtagaacgtcgaattagagagtgtaaACT
ATAGCACTATCGGATAAACTTTAAGGATAACACAGTCGCCAgcacttttt
caaaactcaTGGAAGATGCCCAAAGTTTCCTAAAGTGTTCTAAATTGTCC
TTAATTGGTTTTTGAATTTCTCTAGAAAATGcttaaaacttcaaatttgG
GTACGCTTTATAAAACCTTTTTTGCCAGCGGAATTTAAACAAAACAATCA
GTTTGCTTCTGAGAGTTTTGGAATCCTTTAATCTTCATCTGATTTTCAGG
AAAACGAGGAAAAGGATAATTTTTGCAACAGTTAGGAGGGGAAGAATGGA
AGGAAAGAGAGACATGGACGTCTGTTTTTCACATCACGTTCCTATCCCTT
Acacaaaaatctcttttccttttgtagaaaaaggaaatcaaattttctat
GCTTAGTTCTTTGATATCCTTCTGTTATGATATAACActtattgcaaggg
agtataaGTCTTGTATTTGACCCTCGCAAAAATAAGagggaaaaaaatga
agaaagaaagTTATAAAATGTAACACCTAAAGAGAAATCGATAACACAGA
AGCTTAATTTTGATTGGCTGCTCGATTTCATCCAATCAAAGAGATTTATG
AAACCAGACGAAGCTCGGTTTCATCAGCAGATCGATTTCAATTGAGCTAG
ATCTTACAAGAAAGTTTGCCACAAACAAATCTACCGGCTTTTGTACGTCA
ACGGAAATTGATCGCAATTCAAACCCCAAATAATGAAGCTGATCTTTTTG
ACATTGCTTGTGTCCACCTTGGAAGTGGTTTTGGTGGATGGTTATTTCAG
TAACCTCAGCGAATTACATGGAAGGAAAAGGAGCATGAGACAGGTAAGCT
TTTATTTTTCCAATCTTCCTCATCGATAAACGATAAACTGAACTCATCTT
TACTCCCGCAAGGTTGAAGGCGATCTTAAAGCACTTTGCAAAAGAAAGTA
CGCAATCTTCAACGGAAGTATTATGAATACAGTACAGTATGTAATTTTAG
ATATGCTCTGAAAAGGAGACATTATCTAAACTCAATGCAGTGTTTCTAAA
GGtcttaatttgaaaataaacacCTTTGCACAGTATTTTTGTTAGCTAAG
CCGTGTTTTACAAAGTGTTGAGTCATCGCTCAAGTTTCAGATTAAAAGTT
TAGGTCAAATTTTGTTCATACTTTAATAAAGAAGTCGATCTCAGAGAAAT
TCTAATAGACAGAGAAATCGTTTGTTTTAGAGTGCAAGAAATCACATTTT
GTGTTTTATCTTAAAAACTTCTGATTTAATGAGGATATAATTATGGTTTA
GCCTTTGAACTCCTTCATAGGAGACCTAAGGCCTAGACAAAACATATTTT
GTAAGATGGGAAAGTCTTGATTTGTAATATTCAACTCAATATTGCATCAT
CACTGTATTATTCTGTTGCAGCTTCAAGTCAACTATTATTACTGTGATAC
ATTGCTATTGGGTTTTCTATGCTCTATATCCCTCTATATCTTATTCTTCT
CGCTATAGTTCTTGTCTTATACTCCTTGTGTTTTCACAAGCTTTAAAAGT
AGATTAGTGTCGGATTTTCATTGACACTTATAACTTACTTTCTTCAATTA
AAATTCTGTTGACCtattttgtaacattttccCTGCTTCTGAATATCACT
CCCTTTTTTATATTGTTGCCTCGTGTTCGTGAGAGATAATCACCGAGTTG
AAGCCACAGTTATTATGGTCGGAAACTTTTGAAATGAGTTGTCATTTCGG
TTTATGCAAGGCACCGggaggttcaaaatttcaatcaacTACTTCTTGTG
TAAATCAGAAATATGTTGAGTATGGCTTTCGATCTGCATTGTAATGTTAC
CACCCCTATTTCACTGGTANATAGACAGAGAAATCGTTTGTTTTAGAGTG
CAAGAAATCACATTTTGTGTTTTATCTTAAAAACTTCTGATTTAATGAGG
ATATAATTATGGTTTAGCCTTTGAACTCCTTCATAGGAGACCTAAGGCCT
AGACAAAACATATTTTGTAAGATGGGAAAGTCTTGATTTGTAATATTCAA
CTCAATATTGCATCATCACTGTATTATTCTGTTGCAGCTTCAAGTCAACT
ATTATTACTGTGATACATTGCTATTGGGTTTTCTATGCTCTATATCCCTC
TATATCTTATTCTTCTCGCTATAGTTCTTGTCTTATACTCCTTGTGTTTT
CACAAGCTTTAAAAGTAGATTAGTGTCGGATTTTCATTGACACTTATAAC
TTACTTTCTTCAATTAAAATTCTGTTGACCtattttgtaacattttccCT
GCTTCTGAATATCACTCCCTTTTTTATATTGTTGCCTCGTGTTCGTGAGA
GATAATCACCGAGTTGAAGCCACAGTTATTATGGTCGGAAACTTTTGAAA
TGAGTTGTCATTTCGGTTTATGCAAGGCACCGggaggttcaaaatttcaa
tcaacTACTTCTTGTGTAAATCAGAAATATGTTGAGTATGGCTTTCGATC
TGCATTGTTATGTTATGAATTGTACCACCCCTATTTCACCGGTACAACTT
AGAACTTTCTGTTAATTTTCCAAGGAAACGTCGGTTGCATTGAAATTTGA
AcaagttagattttcatttctgCATGTTTGgatattggttgttttttttc
aatctgtcattccaACAAAAAATGTGAACATAACTTTTTCATAATGCTGT
TACTTGTTGGTTGCGATAAGAATCGCCCTCCTTGAAACAATGGTCCATAG
TATCGACACatagataaaaaataaaccCTTTCCCTTTTTTTATCGTCAGT
TAAGGTGAGAAGCTACGAGACCTCTATCATTCTATAGAAATATTTGTCGA
GACCACGCCCCTGATATAATCAGTGTTAGAATTGTGGTTAGGGTTAGCTC
CATCACGAAACATATTTCCTTTATTTGATTATCCTGTTCCTTCCTTAgat
attcttttatttattcCCGTTTAGCCTGAGAAATTTATTATCCTAATTTA
CAGGATATCAATTTTTAATGCAgcgtttttatattttattttgtgaAGAG
CTACTCCTGAGAATCATTCTAAACTGTTGGTATCATAGATCCCTTTCCCC
AAATCGACATGAGTTCAGGACTTGTTTGACAAAGTTTCTTCCTTTTACGT
GATTCCAAGGAATGATCTTAAGGGGATAATTTTACAAgatgtaaaataaa
aacaattgaatTCTTAGGCCCTCTTAGGGATAAAAAGTTGTTCTACTTAA
CGAAAAATTATCCATTACTCACAACAAATTATGTGATCATATTCTCAATT
CGAATCTTTTGGTCAAAACTGAcccttttgtttttaaacattttttggga
TTTTGATTGAAATAAGAGGCCGATCAGTGACCCATATTTACCAACTTTTT
GAGTAAtgtaatattttcaaagtcGTTTTTTATTCTTCCCTTCATAGCTC
AGTTTATAAAAACTTCTGGATTTTTAGGAGGTTGAATAGCTATAGGAAAT
GAAAAGCTTTCTTCCAAAATATACTTgaactttattttcaaaaacgcCCC
TGTCTCGGTGActcgaaaaaaataattgagATAAATGCTAATGGGGCTAA
TACCGGTGGGGATGAATagtttcttattcttttaatCTTATTTTCAACAG
AAATGGAATTAATAAACATCAAAGTTTTAATACCTCCTTAGACTGCCATG
TCAGTAGGGTATCACGCGGAAAAGGTGAGCGTGGGAGTTAGGGAAGCATA
GGAAGAAAGTTGGCGGTGGCAATTGCTGAAAGCTACTCTGTTCATCAGCA
GCCTTTTACCAACTTTTTCTCGCTCTCCTACGCACCTATTTTAACAAACA
CCCTCCGCCCTCAGACATTAACAGAATAGTTTATTAGTATACGCCTTCCT
Caatgggtaaaaaaaatttttctagttatagtcaggcagctgaggtcaca
taaaaaagtgcagtagctacttaaacagttgttttcaatagataTGACCT
TTCTGAACAAAAAATCATCAACCGGAAAATATTTACCGGACGCGTCCGGT
AATTCGGTAaccaacatagacatattatataccaatcgacgcgttttttg
gcgtagattaagaaaaaggtcagtaactatgtctgaaaatttgataataa
aaagttaaaagcttccgaagttttgatgacgtcatatttacactttcttt
aagatcaattttctcgagttaagttagttgagaaatcatatatatccact
tcaaagtcttctatatcgatttttgagagctttcgaatggcggtcttaga
tttcgattttgataagtttgattttttgattttttttcgtctcggacagg
taaaattgacgttaccgACATAGAGGAAAATCGTTCtaactttttatagc
aaaattttcagatatggttacGGACCATTTTCTTAACCTACGTTAAAAAA
CGCTTCGATCGGTATAGTATATAATATGTTTATGTtggttctcaaaattt
tttcagtatGCCTATGGGCACGCATGACGTCACCAGGTTCTAAAATATTa
ccggacacgtccggtaattaatttcaacaactccggttgatggtttctag
atatctaggttgtatattttcaattaaaagtggtttgggattgttcgcac
cccgtccaatttttttgtgacctcagctgcctgtctattaGGAAGATTAG
TTTCTCACAGGTGAAAGTTTTTAATTGCCAGTCTTTCCCACTGTGTCTAT
AGGGGAATGACTTGTGTCGAAGATGTCATTATATAATATAGTGTCGTCCA
AATGGTAACCTAACACAATGTTGGTGCAAAGGTTAATCACTACTTATCAA
GTTTTCACCATCATTGAGTCAGGCCCATTCTAACGAAACTTGACCCAGTA
ATATTTAATATTCAACTTTGAtgtcaacaaaaaaaatttttttcgaaggG
TCACTGAGAGAGATGCTCCAAAGCGTTCACGACTCGTTGAGATTTTATAT
CCGAAGTTGGTTTTTTACGACGAAAAACTTACAGTTTTGAAGCCGtgtat
aaaaaagagaaaatacaaTAGCTACTTCAAGTTTCAACTAGTTCTAGATA
CCAGATTCCCTTTGAGAAAACAAAACACGTGCTTCTTATTTTTTGTGCGT
CTTCACAGGTCAGATTATGTGATCTTTTTCTTCAAGATAGAaacatttta
tgactttttcaggcaaaaattaaaaattcatcGGGAACAGGTTTGACGAT
CAATCGAAGTTCTCAGANTGAtaagtttgattttttgattttttttcgtc
tcggacaggtaaaattgacgttatcGACATAAAGGAAAATCGTTCtaact
ttttatagcaaaattttcagatatggttacGGACCATTTTCTTAACCTAC
GTTAAAAAATTCTTCGATCGGTATACAATATGTCTATGTtggttctcaaa
attttttcagtatGCCTATGCTTCACAGGTCAGATTATGTGATCTTTTTC
TTCAAGATAGAAACATtaggcaaaaattaaaaattcatcGGGAACAGGTT
TGATGATCAATCGAAGTTTTAAGCATAGCAGAAAAATTTATTACCTAAAA
AAGACAAGATCAACGAGTTCATTTTTATACCGAAAAAGGTTTGAACTAGG
TTATATAACTTTAGGAATATTCAGTTTCAATAAACACACGCCACAAGGTC
AAAGTGCCTCGATTCAAACAGTACTTTGTTGTGCGTAGGACGAAAGACTT
GATGCTTACGTCATCAAAATTACCGTTCCCCTTCTCTCTCTAAATCTTTC
CTATGGTAGAAAAACTTCCTTATTGATGAAGAGTTCGATACGAGCTTTTA
TTCGTGTATACGAAGAGATCTCGATCTATATTCTAGTAATCTCTATGTTG
AAGCCAGGGGTTTTCCGGCGTATTTTTATAAATAATAATATGGAGGAGGG
GGTCTTCTATTCTTctttaatttattttcgttCATTTGTTGATGTTATGT
TGCTGGATTAGGGTTAGTTTACTCCTTCTTGTGTAGAGGTTGAGATCTCA
TTGAAAGACAATTTAAATTCTTCCTTATTATGGTCAGAATGTTatgaaca
aaagaaagaaaacgaaGTATAGgtcataaaaaagaaacaacAAGTCGTAC
AAATTATACGACAGACAAATTACATGCTAAGaaaaattatttggaatttt
agatcttgttttgaatagaaggaaaattagaaaaatgaaGTGTACAGTAT
TGTTGATAGCGATGTATTTCTCACAAATCAATGCTTACTTTCACCAACTT
AGTGGATCTTATGGTAAAAGagaagtcaaaaaattgaaagattcaAATGT
AAGATTTTCAGCCGTGTAGTTTAGTTGTTTTTATAGCAATAGAAACCCtt
attatttcaaatatttgatattttactTTCAACATCACCATTTTTTTTGT
GCCCAATTATCTAGTAATAGTTTTCAATTTCACGGATTGATATTTTCATC
CAATTTACGACCATAtgttttcaacaaatttttagcGCACATGTCTAATC
CCGTGAATTGGAAATGGCACTGACACAGCATTTCTTTTgctaattgtttt
tattggatttctttcagttttacgaCCAATTAAGAAGAACGACCGTCAAC
AACCAGCGTGACGCCCAACTCGAAAATATCTGCCGTCAAATCACCGTCAT
ATGTCAACAACGCTTGCCTAGCAACAGCGATGACATCATCAAACAACATG
GTAGCGACCAAAACAATATGGTAGAAGAAATTATGGCAAACGATTACAAT
ATTGATGACATCACTGGNATATGGTAGAAGAAATTATGGCAAATGATTAC
AATATTGATAACGTCACTGATAACGAATTTGTCTTGGCAAAAGTTCCAAA
GTCACTGAGGAGTAAAGCTAACAACAAAAGACTTATAAAGAAACGCTAAT
CGGCTCCAATCCAAAGATTCTAACACTTGACAGACATGACATCTTAAATT
TTGAACCCTCttaaaatatcagcgtttttaCTATTTTCGTTGTTGTAGAA
AGATATTTTTCGATCATGTATTTAAACTTCTTTATCCTTTTCAATCTAAT
TCAATTTGGTATTTGATGCGTGGGTCAAAATGGAGGCAACGAGGCTCTAG
AATATCCATCACATATTCTAAGCAAAAtatctcttttttttctcatcttt
ttcGCGAATTCAGCCTCTTTGCTCCTCTCCACAATCCCTGAGCTCAACTA
ATCAATCTCCTAAACAAGCCATTACTAAATGCTATCCCTTTTTGAAAGAT
TTGTGTCTTTGGAAACACGTGGAAACGATGAACTCAACGAACGTGTTTTA
CTTTTCCTGGTTCGAAGACTAGACTCTTAAAAATGCTAAGNCCTGGTTCG
AAGACTAGACTCGTAAAAATGCTAGGCCAGTGGAGATAAAGTGAAAGAAA
TAGTTCCCAATGTCAATAAAGGAAAGAAAGCTTTTTATGAGTCGGAACCT
CAAACTCTATAATTGTCAACTCAATAATCTAGAGGATCTCAAAAATTTAC
TATCTTACCCGTCGGTGGTGGCCCCGATTCTGCAACTCTGCCAACTTTTT
ACCCGACAAAACGTCTAAAAAAGGTACCTAAATTCCaccaccgaaaattc
ctttgaaattcaattcgATTTCGGGaatttcgaatatttttttccaattc
cGAAAATGCTGATattttagcaaaattccatTTTTTCGTACCAAAATTAC
CCAATTTTCCGTCTCCGGCAGAGgaccaaatttccaaaattccgTCGAAA
GTTTAATCAAATTCTACCACTCCGTTCGAAAAAATAACcaattccgctcc
tccgccaaccattaACCCCCCCGCCAAATATGTTAAGATTTCAGTCGGAG
GATAAAATGCaaagggtttttttttcttttcttttttttgatctCTATTA
AGTGCTCAAATTAAAGACTCAAAGTTGATCCAAGACTTGGGGAAAATATG
ATAATGAAATATCGTCAGCATAGGCTTGGACTCAAGATTAGTTGGGAGAT
CGTtgatacaaataaaaagaacaacagAGTATTTTTAGTGTGGGTAAAGC
ACACCGAAAAGtagataaatatttttctcgaTTACGTAATAGCTAAAAAG
ATTTACGTTCGCCACTATAATCACCAATATTATCCAAGAACCTAATATCT
GGATTTTCCTTTAATGCTTGGGAAATTTGCAAAAGCTGCAAGTCGAACAG
ACACATTCATCGTGGATAGTTTTTCACTCTTTGAGATCACGTGTTCGTCG
TTTCTTTTAGCTACCAATGTATCTGCTCTCTCAACAACTTTACTTGAAAA
AGGTGAATTCGCACGAGAAATTTACGCATGCCTTATTGTACGTTTTAGGG
CAGTTTCAATAAAATATATGCTTTACTGCATGACAGCATGATTTCCGTAA
TGAGGGCTTCCAGGGAGGGGTTACTCGATCCGAAATTTACCATATGTGTG
GACAAAAATTTCGGTTTCAAAAGTAGACTTTCCCTAATTCGAAattttat
aattcgaatctttctatgatTCATTGTccctctgtaattcgaagaaaTTA
GACTTCCGGATGATAAGCGAGAGTTAAAATATTTGCGGTTCGTATCGTAT
TTTTCGGAGAATCCAAATAAACGCCTTTCTGAATGTTTTTTGATAAACAA
gaatgccaaaaaaaattttaattgactttaaagaaaattttcttctattt
tcagAGTAATGATGAAATGTCCAAAAGATCAGAGGTATGGTATATACTCA
TTCcaacaaattcaaattcattcaTTCCAACACATTCAAATTTATTCATT
CCAACTCATTCAAATTCATTCATTCCAACACATTCAAATTCATTCATTCC
AACACATTCAAATTTATTCATTCCAACTCATTCAAATGCATTTAAATTCA
TTCATTCCAACTCATTCAAATTCATTTAAATTCATTCATTCCAACACATT
CAACTTTTGTCAAAAGGTTTTAAAATCACCGTTTAAATAAGCTTCCTATA
TTTCTCCAGGTGTagttaaagtctattcacgataagtgtgcactcttttt
tcatttacctataacttttgaaggaattcttcaatctttataaatttggt
atcattggaaagataNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNctttccaatgataccaaacttataaagattgaagaattc
cttcaaaagttataggtaaaagaaaaaagagtgcacacttatcgtgaaca
gactttagtaccTTCATCACTAAATAAATTTGATATGCTTTTGATGCTGT
GTAATGAAAAATGTAACTGTCTGGTGCAGCATATTACTTGTGTGGTACCA
ATTCATTGAATCTTGATATCTCCTTTGTTTAGCTACCTGTCGGTTTGATA
AACGTCAAACATTTTGGAAAGGAAAATGGATATGCTAAAAAAGATGTAAG
aaagaaatgcaattttttccatGCCTGTTTTTCGAACGCAGAACCACTTG
CAACCACTTTTGCTTTTAATGATGGACGATGGAACAATTTCTTGAGCACT
ATTCGTGTCCGAGTGCCAGACAGGGAGTTTTTGCGTCCGTGTGTAAGACT
GGGATTTCGATAGCTCGAGCTCAAACAAGCAAAACTTGATCTTGACAAAA
GAAATCGTTCGATATTCTAAGGATTCAATattataatcttttttttccAG
ATTCCAATGagatttttgagcaaaaaagaTGTAAGTGTGGTCGATACGCT
AAATTTCTCGCTTTAATGTCTAATCAAAAAAAGACGTTTTTCGAGATGTA
ATTTATTTCAAGCTATCGCTTACAAAGTTTTGTACATAGCTAAGAGGTTT
TTCGTTTTCGAAACAAACCGTATCTAGAACTGAAGTTTCCACATAATTTC
GAAACCGGGATTGAATCATACTCTACCCGATTGAATCGATATCATTTCCT
TACGAATCTACCGAATTGGTACAAATTAtgaatttttaccaaaaattcgG
GAAAAATTTACAAAGCTTATGCAAATCATCTTCGTTCGCTCTCTCTCTCA
TTTTACATTATTCTTCCATATCAtctgaaattttcttttcgattttttag
ATCCCGATGcgatttctgagcaaaaaagatGTACGtattacaaaaatgtt
ttttttctgattagCCTCTCCTGTCAGAAGGTTAGAAAGGAATCTTTCAC
TCTTTTACCTGGCAAAGCAAATGTGATGACTTAAGATTTACGTCACATTT
CTGATGAAGGATTAAAGAAACAGAACGAAGAAGACTGAGAACGAAGCGGG
CCGTGCGGGCCGTGCAACTTATGGCTTTTTCTAGCCCAACATTGTAGATT
CGACTCTAGCATTTGCATGGGTTCCTTTAGCATAAATCCCTCCTACCCAG
GCTTTTTACCTTATCATTGTCATGATTCTTTGTAGATTCCAATGCGATTT
CTGAGCAAGAGAGAAAATGAAGAGGTGAGATATGCAAAACTACCCTTTTT
CCTTCTTCACTATTTATCTTAATACCTATGTTATCAAATCTCGTAATGTA
CCGGATACTTGAGGTGCGTAGGTGCGCCATCTCCACAATGTCGGAAGTAA
ATTTCAAGACAATTCCCTATTCAGGGTCACTATATGCTGGATctcaaatc
aaatttcaaagttttctcCCTCATTGCATCCCTTCAATATTGATGAttat
ttgttatttattttctaattccAGGACATTCCAATGAGATTTTTATCCAA
ACGAGGAGAGGTAAGGCCATTATAAGTTTTTTGTAATTCTGTAGTCcttt
cttcaaaattcaaaatcttccaaatcgattaacgattaACAAAACTCATT
TAACGGTCAATTCTTCTCGTATTTCAGCTCCCAATGCGCTTTCTAGCAAA
GAAGGATGATGAGAAAAACAGCGAAGAAGAGGTAGGAAGAATTCATTTTC
TAACTTATCATAAATTGGGGGGAGAGACTATTTGAAATATGAAGATTTTT
GAGCTGCGTAAATTCTTTTATTCTGAGTATCATTAAATCTCatccttttg
ttttcattttcagctgCCGATGCGATTCCTTCAGGTAAGACATCTTTCTT
GCTTAAATTGACAGCAAAAatggaaaatctttttgttAATAATTAACGAA
GAAACAAAACCCGTTGCTGTCCAAGATATGGCATACTACCACCGCTAata
tacacccctgtttcaatgCCCTGTTCTGACTCTTTAAACCAATCATGAAA
TATAGGAAAAGATTGCCAAAGTACCTAATGTTTCAAATTAAAGTGTCTCC
ACCGAAGAGGATGACAGTTACAGAGGAcgttcacttttcgataaataaaa
ttttggctgaaatttgtaGTGACAGTTGGCATTGTGCATTAATATTTTTg
tggaaaattttattttgtgtaACTTATCTATCTAGAAACGATCACAAGAG
AAACTGTGCAAACGGGTTGTCGATATTTGTTCGAACGTTCTCGATCAAAA
GCGCTGATCCTCTCAAGACAAACCATCGACCATGTAACAAAATAATCGAA
CCCTATAAACATTATGGACCAACAAATACATGATTTGGATAAAttgccag
aaaatgaaaaactgtttTGGCTAAACAATTTCCTTTTTGAtgtaaatttg
taaatagtGACATGGACTAAATTGATAGGCTTTACTCTAAATTTGTacca
tcataaaaaaaacaaccatgCTTATACTGTAAAATAGCCTAAAGTACTTC
ACCTATTCAATGCGTATTTAAAAAGGTTCACTTTATTTTAAAAGTCTTGG
aatcttttcaaaagaattttcgacaaaattaTAATTTAGGAACAATAAGA
ATACTTAATGTAACAAATTTATTACACAAAAATCATATTAAAGAAATAAT
TATTGATTCAAGGATAAAAGTATAGAAAATATTATCTTTATTTAGGAAGT
CTCTTGAGGAAAAAGTTTGAATCTCCCGGAATGTAGAATACCTAGATTGC
TCGAAAACTTATATTATGTGCACCATTACATGGATGCCGAACTCCAAAGA
TAGGGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030185XLOC_030185Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047379-exon-scaffold_127-1491911889:80702..80985TCONS_00047379-exon-scaffold_127-1491911889:80702..80985Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1510915933:80702..80985TCONS_00047379-exon-scaffold_127-1510915933:80702..80985Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1575043694:80702..80985TCONS_00047379-exon-scaffold_127-1575043694:80702..80985Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1491911889:90456..90485TCONS_00047379-exon-scaffold_127-1491911889:90456..90485Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1510915933:90456..90485TCONS_00047379-exon-scaffold_127-1510915933:90456..90485Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1575043694:90456..90485TCONS_00047379-exon-scaffold_127-1575043694:90456..90485Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1491911889:91834..91896TCONS_00047379-exon-scaffold_127-1491911889:91834..91896Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1510915933:91834..91896TCONS_00047379-exon-scaffold_127-1510915933:91834..91896Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1575043694:91834..91896TCONS_00047379-exon-scaffold_127-1575043694:91834..91896Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1491911889:92152..92181TCONS_00047379-exon-scaffold_127-1491911889:92152..92181Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1510915933:92152..92181TCONS_00047379-exon-scaffold_127-1510915933:92152..92181Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1575043694:92152..92181TCONS_00047379-exon-scaffold_127-1575043694:92152..92181Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1491911889:92552..92581TCONS_00047379-exon-scaffold_127-1491911889:92552..92581Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1510915933:92552..92581TCONS_00047379-exon-scaffold_127-1510915933:92552..92581Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1575043694:92552..92581TCONS_00047379-exon-scaffold_127-1575043694:92552..92581Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1491911889:92887..92925TCONS_00047379-exon-scaffold_127-1491911889:92887..92925Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1510915933:92887..92925TCONS_00047379-exon-scaffold_127-1510915933:92887..92925Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1575043694:92887..92925TCONS_00047379-exon-scaffold_127-1575043694:92887..92925Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1491911889:93176..93211TCONS_00047379-exon-scaffold_127-1491911889:93176..93211Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1510915933:93176..93211TCONS_00047379-exon-scaffold_127-1510915933:93176..93211Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1575043694:93176..93211TCONS_00047379-exon-scaffold_127-1575043694:93176..93211Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1491911889:93329..93382TCONS_00047379-exon-scaffold_127-1491911889:93329..93382Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1510915933:93329..93382TCONS_00047379-exon-scaffold_127-1510915933:93329..93382Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1575043694:93329..93382TCONS_00047379-exon-scaffold_127-1575043694:93329..93382Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1491911889:93515..93535TCONS_00047379-exon-scaffold_127-1491911889:93515..93535Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1510915933:93515..93535TCONS_00047379-exon-scaffold_127-1510915933:93515..93535Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1575043694:93515..93535TCONS_00047379-exon-scaffold_127-1575043694:93515..93535Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1491911889:93887..94508TCONS_00047379-exon-scaffold_127-1491911889:93887..94508Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1510915933:93887..94508TCONS_00047379-exon-scaffold_127-1510915933:93887..94508Clytia hemisphaericaexon
TCONS_00047379-exon-scaffold_127-1575043694:93887..94508TCONS_00047379-exon-scaffold_127-1575043694:93887..94508Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_127supercontigscaffold_127:80702..94508 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0354777	0.172982	0	0	0.287062	0.378067	9.48735	10.1395	33.3168	26.7738	15.4287	28.4675	15.72	14.3289	0.0402909	0.172953	14.2001	19.9979	45.6712	47.3166	47.4402	49.8941	20.491	25.5047	28.5865	28.2468	1.50913	1.29794	0.15751	0.240717
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047379 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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