TCONS_00047427 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047427
Unique NameTCONS_00047427
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4895

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047427 ID=TCONS_00047427|Name=TCONS_00047427|organism=Clytia hemisphaerica|type=transcript|length=4895bp
atatagttTACTTCGAGTTGTCAAGGACGTTGAAACTAATGGAATAATGA
GATGGAGGTCAGTggtctaaatttttgaaagccTGTCTCAAAACTAGTTT
ATTGCATTCTGAAGCTGAAGGCAGAATTAACCAAATATCAAATGTTTGGA
GATTAATAACCGCTNTATTTTGAAGCTGAAGGCAGAATTAACCAAATATC
AAATGTTTGGAGATTGATAACCGCTTGTAATGTTTTAACATTCTGAAACC
TTACTGTAAAGTTATTCTCTAGAAGATTTAGAAGTTTCCAAACGCCATCC
AAAGATGTTGAGGTTACTGCTCACATTGACAGTCTTTTCAACATGGAATA
TGTTGGAGGTGTTTGGTGAAGGTGAACAATCTCCTCCTGTCGTTCAACAA
TCAACAAATATGTTCAACAACTTGACGTTAGAGACTTTCGAACAGTCAAC
AAAAGAGAAAGATATAATGTTGGTTCTCTTCTTTGTACCATGGTGTCCAC
ATTCTAAAGCGATCCAACCAGAATGGGAGAAAGCATCAAATGTACTTGAA
CAACAAAAGGAATATGTTCTTGGTCGAGTCAATTGTGAAGATAGTGGGAA
AACACTTTGTGAAAAATATGACGTCAAAAAATATCCGACAGTTAAGTTAT
TCCGACATGGACAGTTCCAAGAAGATTTTGATGGCAGAAATGCAGATTCA
TTAATCGATTTCGTACAAAGAGCACAATCAACAAACGGACCTGTTGGAAC
GACACCAACGCCACCCTCTACTTCAACCACACAATCACCGCCACAGCAAA
CAGGGGCGTCTCTGGTGAACAGTGAGCAACAAACACAACAACAGCCACAA
GCACAAGTTGTCACTCAATACCAATCAGCAGGTGAAAACGTGAACAGCCA
ACAGCAGCAAGTTTCAGCGCCTGTTGTACAAACACAAAACCAACCCCAAA
TTGCAGAAAATGCACCCGTAAATCCGCCCTCGAATCCGCCATCTAATACT
CCAGCGGGCGGAAATTCAATTCAAGGATTTCAATCCGAAAataaactttc
acaacaaaaagCAGGACCAAGTCTAATGTCTTTATATGAATCCGTCTCTA
AAACTAAAGGTGGGCCTCACCCTTTATACCCACAAACATTCCATTCACAA
GGCCCCGTTGGAACAGCTCCGGCCTCAATAAGCCAAGAACCTTTTATACC
AAAGCGAGATGCTGCCATTATGAATTACGTCATGAACCGACATGAAGAAA
TAAAACAATCACCGGGCGATTATCAGAGATTGGTAACTTCGAAAGATGTT
GATCAAATCAAGAAATATTACGAATGGAAATTCAAACAACTGTCCTTACc
agagaaagaaaaacaaaaacgtaTTGAACTTGGTTCTATGTTACTGGGAG
ATAAACGCGCAAAAGACTAAACGCAAGCTGTACTAATATATTTCTCCATC
NTTCAAGGATTTCAATCCGAAAataaactttcacaacaaaaagCAGGACC
AAGTCTAATGTCTTTATATGAATCCGTCTCTAAAACTAAAGGTGGGCCTC
ACCCTTTATACCCACAAACATTCCATTCACAAGGCCCCGTTGGAACAGCT
CCGGCCTCAATAAGCCAAGAACCTTTTATACCAAAGCGAGATGCTGCCAT
TATGAATTACGTCATGAACCGACATGAAGAAATAAAACAATCACCGGGCG
ATTATCAGAGATTGGTAACTTCGAAAGATGTTGATCAAATTAAGAAATAT
TACGAATGGAAATTCAAACAACTGTCCTTACcagagaaagaaaaacaaaa
acgtaTTGAACTTGGTTCTATGTTACTGGGAGATAAACGCGCAAAAGACT
AAACGCAAGCTGTACTAATACATTTTTCCATCTCCAATGATAACACAATG
ACGAAAGCTGAACATTTCTAGGACAACCTGAACAAAAATACGTTGTGAAA
GGTGTGGTTTTTGAATTGGAATGATTTCAGAATTAATACGGCCTTAATCT
TTTTATATTGATAGGACTTTTCATAAGTTATTTTGAGTTCAAACGACTGC
cttgttttgaaacaattatcaaggtgattaaatccctGGAGTCTTCAAGT
gcgattttttttaaacagagTAAACTTCTTATGGGTTCTCTTGGAAATCA
ATTACTAtggcaatattttgaaaacgagatAAAGCGTTGCTCGTAacgta
attcatgaaaaggtcTGTTGACCTTTATGATGATTTTGGCTGACCGATAA
TGATAACGTTAAAAGTGAAAGGACTTATATCGATGACTTTGGCTGACCGT
CACTATTATGCACCGGTCATGGTCCGATTTTCATCATCGTGGATAATGCA
TTCAGTTCGAATATTCAGAATACATTATttagtttctcatttttatgtaa
aatgcaaaacaattttgatttctatAAATTAATCAATCTTATACTGAATC
AGATATTGAAACAAAGTTGAATAAACCCCCGGTTCTCCATTGATTTTTGT
CTGGATTCTAACCAAAAATGTGTAGAACCAGGGGGTAGTCTTTTATATGT
TACTATGATCAACCGTTAGTAAATAAGTCTGCCAttttaaattgacattt
tttatcTGTGGATATTTTATATCTTGAAAGTAGTTTTTGATGGAAGTGTT
TTCGTAGCAATACAACGTGatacttttttttcatcatgTCACGCATTTCG
GTCGATCACGATTCAATCGAAGATCACGCTGTACACAATGAAGTTCCCGA
ATTCATGTCGCTTATCAAACACTATAAAGAGAAGGGTTGTTATCAGGAAG
TCCTTGCAATGAGATACAGATATGGCAAATGCAACCTTTTCCATTTGATA
GCACGTAAAAGTACTTTACAACTCATCAAAACTTTTTTCGATTACACCGA
GAGCATTATGGGTAAAAACTTTCTTACTTACGAGCTTAACACGACGGTTG
ATCGCAACGGGCGTACATTTTTTATCATTGCAGCCAAGCATCTCCAAGAA
GAAATCTTAATGtatattttaaaagaatataACCTAGATCCAGGTTACTA
TGCTGCCTACAACAAATCGTCCGCTTTCACATATCTCACCAAACGTAAAC
TAACCGACTGCATGGTTCGAGCTCTTGCCTTGATTGACCAAACAAAGTTA
AGCGAGGAAGGTTTCAAATGGTTTCTTGATGACATGGAGTTACTTAAAGA
TACAATGACCGAGAAAGGGTTAATCGAGGCAAAATGGATGTCAGCTATGA
CCTATAGATTCAAACTGGGTGGGCGAGTTTCCAAAATGCAACCGTTTCAG
GAGTCAACGATTGCGTCATACGGTGGTGACTTACGTGTCCGTCAAATCTT
ACGTCATATATCTACGCAACTTTTCTTCCGTTGGAAATATTACCTTGGGT
ATAGTTTGTTAGAAGATGTTCAAATTTTGTACATGATCAAAAAGGCTGAT
AGGGAAAACCCAAACCCAAAGCCAATCATATTTGTTGGTTGCACTCCACT
AGAGGTTGGCGAGTACATAAAGGAAGATTACAAAACTCGATCGTTACGTG
AAATATTGACCAAAGAATACGACTGTCACCAACACGATGAAGAAGGTGAT
AAACGGTCCCGACGATTTGCTGCTAAAATTCGTTCAAGATGCTGGGGTTC
AAAAGTCAAACGTCAAACACGTGAGTCGCGTGATATTATCAACCTTCTAC
ACGTGGATAAGAAGAAATGTCAGAAAGTGGTCAAGCTGAAAACCAAAGTC
AAGCTCCCTTACCTGGATCTAACCGAAAATGGTTTCTATTTGATCATACC
GGGCGGGAATTACCTGAATACAAATATCCATGCGGAAGAATCCTTATGTG
ACGTATCAAGCTATCTCTACAACGCTTGGGATCACAAATCAGTCATCTAC
GGTAAAAACCGGCCTTGTATATCATGTTGCGGCCGCTTGAAATCAGAAGC
AGTCGATGAGTACAATAAAAAGCATGGCTTCCTGTATACCCATACTATTG
AGTACCAAGAGGATGACGCTAGACTGCAAACCTTATCTCTCCTATACACT
TCTCCTTCATTTATAACTAAGAAGCCACCACCGAAGCTACNAGATGACGC
TAGACTGCAAACCTTGTCTCTCCTATACACTTCTCCTTCATTTATAACCA
AGAAGCCACCACCGAAGCTACAAGATGGTGAAGAAGTTATGGAGTATAAG
AAAGATGGTAGCAATGTTGGTCATGTTGAGGGGAATGTGGATGAGTTTGA
AGATTTCGTGAAAGGTTATGATACTGCAAGTGACTCCGAAGCTGAATGAT
CGTTTGGTTGGGAttggttttaaaagttttttaatctTAATCTGGACATT
TTAACAATACATCAAAACTAGCGAGGTTATGCAAGAAGCTATCTACGGCA
AACACGAAATCTATGGCGTGAGTTTTTTGCAGACTAGCGTCCAAACCACA
AAGATAGCTCTGTATCCAGTCTAAAACCCTACGGCATAGATTCTATACGT
CATAGATAGccagaccatgttcgcacgtgacggttccgtttcgctccgaa
acaaaatgaagccattttaTTGGTTACATttaagttttacgtcacttcta
accaatagaacgACTTCATTCCGTTTCGGAGCAAAACGGAACCGTcgcgt
gcgaacatggtcttaacCTCACACTTTTCCCATCACAGGGTAAAGATACT
TAATAGGGACTGCCAATCCCCGTTCATTGGgtgattttttctatttgacT
TTCAAAAGAAAGTCTCAGTGAATAGTGCCAAACAGTATCTTTCCAGCGTC
TGGCACAAAGCCTGGTACAGCCTATACCCTGTGAATAGCGGTTGAATCTT
CAGTACTGAAGGAGCTTTTTATATAGATATCAAAGAATTAGACAC
Run BLAST on NCBI

transcript from alignment at scaffold_128:35127..43938+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047427 ID=TCONS_00047427|Name=TCONS_00047427|organism=Clytia hemisphaerica|type=transcript|length=8812bp|location=Sequence derived from alignment at scaffold_128:35127..43938+ (Clytia hemisphaerica)
atatagttTACTTCGAGTTGTCAAGGACGTTGAAACTAATGGAATAATGA GATGGAGGTCAGTggtctaaatttttgaaagccTGTCTCAAAACTAGTTT ATTGCATTCTGAAGCTGAAGGCAGAATTAACCAAATATCAAATGTTTGGA GATTAATAACCGCTNTATTTTGAAGCTGAAGGCAGAATTAACCAAATATC AAATGTTTGGAGATTGATAACCGCTTGTAATGTTTTAACATTCTGAAACC TTACTGTAAAGTTATTCTCTAGAAGATTTAGAAGTTTCCAAACGCCATCC AAAGATGTTGAGGTTACTGCTCACATTGACAGTCTTTTCAACATGGAATA TGTTGGAGGTGTTTGGTGAAGGTGAACAATCTCCTCCTGTCGTTCAACAA TCAACAAATATGTTCAACAACTTGACGTTAGAGACTTTCGAACAGTCAAC AAAAGAGAAAGATATAATGTTGGTTCTCTTCTTTGTACCATGGTGAGTCA TCGAccgtttagatttttttaatctACTCCcagtggaggtcctataaata aACTGATGTTCGTTCGTCTTCAGAAATCTCCATTTTtccagattttcatt ggactttttccttatatttctttgttatttattttcacagaaaaacatta ttgataacaatgctcaccatcaagcatgtttcaattgataataaactgat ttttgcaaccggaactttctatctattttttccttacaaccctttcctct ccccccatcaacaatcaatgatgaaatttaatgcgcTATGCATTTTTGCT AAACGCTTTATTTACTGActggttgttttcatttttctccttattgctat ctaactttcatcatcaggtaggtccattcagcaccTAGCTTGTTTAATCT ACTCCCAGGTGTTTTAAGCAATAAGAGCACCCTCCCTGTTTGTTAATGTT ATTTTTGAGGGGGTTTTTAGAAGTACAAATTCTGTCCTGTAGCCCTCCTG TTTGTCTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN CCATAGCttttctagatcgaaaataatcgagggtggtagattctaccccc ccctggggatacaaaagtcaaaaaagcttggggctaatagggttaatacG GTTCTTTCTTTCCCAGACAGGACAGATCCCATTGAGGATGGTTCTGCACT ATAATGCTATTAGTAATTAAGTAATTTAATCAAACATGCACTCGCTTCCT TGACTAgtgataaacaaaaaatttccatttcgttcatttatttcaaatat aGGTGTCCACATTCTAAAGCGATCCAACCAGAATGGGAGAAAGCATCAAA TGTACTTGAACAACAAAAGGAATATGTTCTTGGTCGAGTCAATTGTGAAG ATAGTGGGAAAACACTTTGTGAAAAATATGACGTCAAAAAATATCCGACA GTTAAGTTATTCCGACATGGACAGTTCCAAGAAGATTTTGATGGCAGAAA TGCAGGTTTgatgcttttttttataagaacatgtaaATTTTGTTTAAGGC TCGGCTGTTCTCATTTTCACGAAGGGAGCTCTCAAAATCATCCCCAATCC CTTATTAGTAATTtttgaggctcagattgttatCATTTTGTTCTTAGGGT TAGACCAGATTTACCTAAAGAAATCATGAAGTTGGTCTCACAAAAACTAA TGAATACAGATTTTAATTTGCTtggagttgaaaaatttcaaaattggttg AGCTTGCGTCCATGAACAAATGGGTCTTTCTTGAATTTTGGCCTTTTGGT TTCGATAGATAATAGCTTTTATTGACTTTTTTGTtgagttacacgttttt tttttaataaggaacacgtttataaggaactcgaggctgaaaatggtcca aaaaataaggaattgttaaggaactgctcaggctgagaataagaaaacta gttttaaggaatccaatttttgcgaatccaaacttagcagctatgtaaat aaggaactcgataaggaactttgaggctgaaattctctgtaaaaataagg aactccaggctcagagcaaagttaaggttccttataaaaaaaaaacgtgt aattggtTTTCACCCTGTCTCTTTTTCCTATTAGTACTTTTTGTAAATCT AGGAAACTAATTTCGGTGGGAACTTCTTTTGGCGGGCAGCAAAAATCctg aaaagaatttaaattttgtGGAATAATTTCAGCGAATAGCAGGGTAAATT GGTTCATTTTTGCCTGTAAAATGAATCCGTtaggcaaaaattaagtttta ttttAGAAAACGATGAAAAATCTAGTTTCGGCGAGGAACTTACTTTGCTA AGggagtaatttttttattttagcgataactaattttgaaGAATGAGTTG CCTTAAAGATAAATTTAATgagataaaaaaatctttcagaaGTTTTTGAT TTCTTCAGATTCATTAATCGATTTCGTACAAAGAGCACAATCAACAAACG GACCTGTTGGAACGACACCAACGCCACCCTCTACTTCAACCACACAATCA CCGCCACAGCAAACAGGGGCGTCTCTGGTGAACAGTGAGCAACAAACACA ACAACAGCCACAAGCACAAGTTGTCACTCAATACCAATCAGCAGGTGGTG GGTTACTTACTCatacgtcaaaacaacgtttatttaacagcctaggctac gtcatatatcttccttcgtttcaaaaactaaaaaagccTGGAGCTATCTT TGTATAGATTATTAACAGCCATAATATTCATAGATTTTAGGATATACGAT ATACATTGAAACAGTATTGTTAATCAGTTTACCTATAAATAAACTAACAG TTATTTCATCCTATTTTTTCTAGAGACTATCACACGGGAAAgcataaagc ttttaatgccaATATAATCAGTGTAGTTTTTCCTGACAGTATTTATTCCT TTACTGCCTTACTGTTAGAAACataaattttcctttatttCCTCTCTAGA AAACGTGAACAGCCAACAGCAGCAAGTTTCAGCGCCTGTTGTACAAACAC AAAACCAACCCCAAATTGCAGAAAATGCACCCGTAAATCCGCCCTCGAAT CCGCCATCTAATACTCCAGCGGGCGGAAATTCAATTCAAGGATTTCAATC CGAAAataaactttcacaacaaaaagCAGGACCAAGTCTAATGTCTTTAT ATGAATCCGTCTCTAAAACTAAAGGTGGGCCTCACCCTTTATACCCACAA ACATTCCATTCACAAGGCCCCGTTGGAACAGCTCCGGCCTCAATAAGCCA AGAACCTTTTATACCAAAGCGAGATGCTGCCATTATGAATTACGTCATGA ACCGACATGAAGAAATAAAACAATCACCGGGCGATTATCAGAGATTGGTA ACTTCGAAAGATGTTGATCAAATCAAGAAATATTACGAATGGAAATTCAA ACAACTGTCCTTACcagagaaagaaaaacaaaaacgtaTTGAACTTGGTT CTATGTTACTGGGAGATAAACGCGCAAAAGACTAAACGCAAGCTGTACTA ATATATTTCTCCATCNTTCAAGGATTTCAATCCGAAAataaactttcaca acaaaaagCAGGACCAAGTCTAATGTCTTTATATGAATCCGTCTCTAAAA CTAAAGGTGGGCCTCACCCTTTATACCCACAAACATTCCATTCACAAGGC CCCGTTGGAACAGCTCCGGCCTCAATAAGCCAAGAACCTTTTATACCAAA GCGAGATGCTGCCATTATGAATTACGTCATGAACCGACATGAAGAAATAA AACAATCACCGGGCGATTATCAGAGATTGGTAACTTCGAAAGATGTTGAT CAAATTAAGAAATATTACGAATGGAAATTCAAACAACTGTCCTTACcaga gaaagaaaaacaaaaacgtaTTGAACTTGGTTCTATGTTACTGGGAGATA AACGCGCAAAAGACTAAACGCAAGCTGTACTAATACATTTTTCCATCTCC AATGATAACACAATGACGAAAGCTGAACATTTCTAGGACAACCTGAACAA AAATACGTTGTGAAAGGTGTGGTTTTTGAATTGGAATGATTTCAGAATTA ATACGGCCTTAATCTTTTTATATTGATAGGACTTTTCATAAGTTATTTTG AGTTCAAACGACTGCcttgttttgaaacaattatcaaggtgattaaatcc ctGGAGTCTTCAAGTgcgattttttttaaacagagTAAACTTCTTATGGG TTCTCTTGGAAATCAATTACTAtggcaatattttgaaaacgagatAAAGC GTTGCTCGTAacgtaattcatgaaaaggtcTGTTGACCTTTATGATGATT TTGGCTGACCGATAATGATAACGTTAAAAGTGAAAGGACTTATATCGATG ACTTTGGCTGACCGTCACTATTATGCACCGGTCATGGTCCGATTTTCATC ATCGTGGATAATGCATTCAGTTCGAATATTCAGAATACATTATttagttt ctcatttttatgtaaaatgcaaaacaattttgatttctatAAATTAATCA ATCTTATACTGAATCAGATATTGAAACAAAGTTGAATAAACCCCCGGTTC TCCATTGATTTTTGTCTGGATTCTAACCAAAAATGTGTAGAACCAGGGGG TAGTCTTTTATATGTTACTATGATCAACCGTTAGTAAATAAGTCTGCCAt tttaaattgacattttttatcTGTGGATATTTTATATCTTGAAAGTAGTT TTTGATGGAAGTGTTTTCGTAGCAATACAACGGTAAATCTTTCGAATATT ACGAATCCTGTTGATAATAATTTTCctcttttaaatattttcaaagggtC AGCGAAATTTTGTAAAGAAACCGTAAAATCCAGACTTGATTCCATGATTT CCTAAGGATTTTATCAGGACTGAGCCTTAGATATAAAGTTGGTCTTACAA CGAGTTTGCCTTATGAAAATCatgttcttttgaaaatttgctaaTGGGGA GAGTTTAACAGTTCTGTGAGACAGGTGTTTAGTCTTAGTCAGATATATTT TACACTTTGTCGCTAATTCAATTATTTCTTTCAATTTGCTTACCTTCCAG TGatacttttttttcatcatgTCACGCATTTCGGTCGATCACGATTCAAT CGAAGATCACGCTGTACACAATGAAGTTCCCGAATTCATGTCGCTTATCA AACACTATAAAGAGAAGGGTTGTTATCAGGAAGTCCTTGCAATGAGATAC AGATATGGCAAATGCAACCTTTTCCATTTGATAGCACGTAAAAGTACTTT ACAACTCATCAAAACTTTTTTCGATTACACCGAGAGCATTATGGGTAAAA ACTTTCTTACTTACGAGCTTAACACGACGGTTGATCGCAACGGGCGTACA TTTTTTATCATTGCAGCCAAGCATCTCCAAGAAGAAATCTTAATGtatat tttaaaagaatataACCTAGATCCAGGTTACTATGCTGCCTACAACAAAT CGTCCGCTTTCACATATCTCACCAAACGTAAACTAACCGACTGCATGGTT CGAGCTCTTGCCTTGATTGACCAAACAAAGTTAAGCGAGGAAGGTTTCAA ATGGTTTCTTGATGACATGGAGTTACTTAAAGATACAATGACCGAGAAAG GGTTAATCGAGGCAAAATGGATGTCAGCTATGACCTATAGATTCAAACTG GGTGGGCGAGTTTCCAAAATGCAACCGTTTCAGGAGTCAACGATTGCGTC ATACGGTGGTGACTTACGTGTCCGTCAAATCTTACGTCATATATCTACGC AACTTTTCTTCCGTTGGAAATATTACCTTGGGTATAGTTTGTTAGAAGAT GTTCAAATTTTGTACATGATCAAAAAGGCTGATAGGGAAAACCCAAACCC AAAGCCAATCATATTTGTTGGTTGCACTCCACTAGAGGTATGATTATTTG CAGTATTCAGAGTCACAGAGacactatttttttattttaataatggCACT TGATTATTCTTAACGACGGCATTTGCCGccaaaaaattggctttcaaNTT GATACGTGCCCACCCCCGGAGAGGGGGGCACTTGATTATTCTTAACGACG GCATTTGCCGccaaaaaattggctttcaaaatcggtGCCCTTTATTGAAC TTTTCTGACCCTCGCAGTGTAGTTTGATATCATGTCTTACTATTTTGCTA AAGCTAGAGTCTGGAATTTATTTTCCATTGTCCCCAAAAACAAGCCCTTA GAGTGCATGAAGCTAATATGACATAATGTGATataacccttacagtgcac ccTTACTTACAGTGCATTACAAGGGTCTTGAAAAACCAACCAACCCTTCA GGACGGtacatgccgtgggtcggaccatGTGAGTAAATAGTAACCGatca ctttttattttcttatttcgaAAGGTTGGCGAGTACATAAAGGAAGATTA CAAAACTCGATCGTTACGTGAAATATTGACCAAAGAATACGACTGTCACC AACACGATGAAGAAGGTACTTCCCCTCCTGTCTTTAAAGTTCTGATAGGC CATGATTCTAATACATCAAGAACAATCGTAGGACTGATCGCACACTCTAA TTATGATTTcctcttcaaaattttcaaatgattgaAGTGATATAAAGTCG TTATTAGTTCTCATATTCATATTCATTGCGATCGGTAAACTTCTTGTCGC CTGAATAGAATAACATTATCCACGGAGAAACTTTTGAACTTCTGACACAA ATCTAATTAAAGAATATACTTACGAGTAGttatgaaaaattcaataaact tttgtCCAAGAGACTTCACCCAGGGTATAATACTAAGACTCATTCAATGT TTTATTCATTAGGTGATAAACGGTCCCGACGATTTGCTGCTAAAATTCGT TCAAGATGCTGGGGTTCAAAAGTCAAACGTCAAACACGTGAGTCGCGTGA TATTATCAACCTTCTACACGTGGATAAGAAGAAATGTCAGAAAGTGGTCA AGCTGAAAACCAAAGTCAAGCTCCCTTACCTGGATCTAACCGAAAATGGT TTCTATTTGATCATACCGGGCGGGAATTACCTGAATACAAATATCCATGC GGAAGAATCCTTATGTGACGTATCAAGCTATCTCTACAACGCTTGGGATC ACAAATCAGTCATCTACGGTAAAAACCGGCCTTGTATATCATGTTGCGGC CGCTTGAAATCAGAAGCAGTCGATGAGTACAATAAAAAGCATGGCTTCCT GTATACCCATACTATTGAGTACCAAGAGGATGACGCTAGACTGCAAACCT TATCTCTCCTATACACTTCTCCTTCATTTATAACTAAGAAGCCACCACCG AAGCTACNAGATGACGCTAGACTGCAAACCTTGTCTCTCCTATACACTTC TCCTTCATTTATAACCAAGAAGCCACCACCGAAGCTACAAGATGGTGAAG AAGTTATGGAGTATAAGAAAGATGGTAGCAATGTTGGTCATGTTGAGGGG AATGTGGATGAGTTTGAAGATTTCGTGAAAGGTTATGATACTGCAAGTGA CTCCGAAGCTGAATGATCGTTTGGTTGGGAttggttttaaaagtttttta atctTAATCTGGACATTTTAACAATACATCAAAACTAGCGAGGTTATGCA AGAAGCTATCTACGGCAAACACGAAATCTATGGCGTGAGTTTTTTGCAGA CTAGCGTCCAAACCACAAAGATAGCTCTGTATCCAGTCTAAAACCCTACG GCATAGATTCTATACGTCATAGATAGccagaccatgttcgcacgtgacgg ttccgtttcgctccgaaacaaaatgaagccattttaTTGGTTACATttaa gttttacgtcacttctaaccaatagaacgACTTCATTCCGTTTCGGAGCA AAACGGAACCGTcgcgtgcgaacatggtcttaacCTCACACTTTTCCCAT CACAGGGTAAAGATACTTAATAGGGACTGCCAATCCCCGTTCATTGGgtg attttttctatttgacTTTCAAAAGAAAGTCTCAGTGAATAGTGCCAAAC AGTATCTTTCCAGCGTCTGGCACAAAGCCTGGTACAGCCTATACCCTGTG AATAGCGGTTGAATCTTCAGTACTGAAGGAGCTTTTTATATAGATATCAA AGAATTAGACAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030209XLOC_030209Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047427-exon-scaffold_128-1491911889:35127..35618TCONS_00047427-exon-scaffold_128-1491911889:35127..35618Clytia hemisphaericaexon
TCONS_00047427-exon-scaffold_128-1510915933:35127..35618TCONS_00047427-exon-scaffold_128-1510915933:35127..35618Clytia hemisphaericaexon
TCONS_00047427-exon-scaffold_128-1575043694:35127..35618TCONS_00047427-exon-scaffold_128-1575043694:35127..35618Clytia hemisphaericaexon
TCONS_00047427-exon-scaffold_128-1491911889:37079..37281TCONS_00047427-exon-scaffold_128-1491911889:37079..37281Clytia hemisphaericaexon
TCONS_00047427-exon-scaffold_128-1510915933:37079..37281TCONS_00047427-exon-scaffold_128-1510915933:37079..37281Clytia hemisphaericaexon
TCONS_00047427-exon-scaffold_128-1575043694:37079..37281TCONS_00047427-exon-scaffold_128-1575043694:37079..37281Clytia hemisphaericaexon
TCONS_00047427-exon-scaffold_128-1491911889:38235..38423TCONS_00047427-exon-scaffold_128-1491911889:38235..38423Clytia hemisphaericaexon
TCONS_00047427-exon-scaffold_128-1510915933:38235..38423TCONS_00047427-exon-scaffold_128-1510915933:38235..38423Clytia hemisphaericaexon
TCONS_00047427-exon-scaffold_128-1575043694:38235..38423TCONS_00047427-exon-scaffold_128-1575043694:38235..38423Clytia hemisphaericaexon
TCONS_00047427-exon-scaffold_128-1491911889:38776..40558TCONS_00047427-exon-scaffold_128-1491911889:38776..40558Clytia hemisphaericaexon
TCONS_00047427-exon-scaffold_128-1510915933:38776..40558TCONS_00047427-exon-scaffold_128-1510915933:38776..40558Clytia hemisphaericaexon
TCONS_00047427-exon-scaffold_128-1575043694:38776..40558TCONS_00047427-exon-scaffold_128-1575043694:38776..40558Clytia hemisphaericaexon
TCONS_00047427-exon-scaffold_128-1491911889:40877..41713TCONS_00047427-exon-scaffold_128-1491911889:40877..41713Clytia hemisphaericaexon
TCONS_00047427-exon-scaffold_128-1510915933:40877..41713TCONS_00047427-exon-scaffold_128-1510915933:40877..41713Clytia hemisphaericaexon
TCONS_00047427-exon-scaffold_128-1575043694:40877..41713TCONS_00047427-exon-scaffold_128-1575043694:40877..41713Clytia hemisphaericaexon
TCONS_00047427-exon-scaffold_128-1491911889:42201..42291TCONS_00047427-exon-scaffold_128-1491911889:42201..42291Clytia hemisphaericaexon
TCONS_00047427-exon-scaffold_128-1510915933:42201..42291TCONS_00047427-exon-scaffold_128-1510915933:42201..42291Clytia hemisphaericaexon
TCONS_00047427-exon-scaffold_128-1575043694:42201..42291TCONS_00047427-exon-scaffold_128-1575043694:42201..42291Clytia hemisphaericaexon
TCONS_00047427-exon-scaffold_128-1491911889:42639..43938TCONS_00047427-exon-scaffold_128-1491911889:42639..43938Clytia hemisphaericaexon
TCONS_00047427-exon-scaffold_128-1510915933:42639..43938TCONS_00047427-exon-scaffold_128-1510915933:42639..43938Clytia hemisphaericaexon
TCONS_00047427-exon-scaffold_128-1575043694:42639..43938TCONS_00047427-exon-scaffold_128-1575043694:42639..43938Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_128supercontigscaffold_128:35127..43938 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.76795e-06 4.749e-06 0.155463 0.155335 0 0 0.594134 9.30723e-10 0.770712 9.67835e-06 0 8.01627e-08 2.10106 1.30578 1.33706 1.84442 1.02006 0.210818 0 0.155987 1.13202 0.879868 1.34577 0.0118079 1.28139 1.86322 0.243703 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047427 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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