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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047516 ID=TCONS_00047516|Name=TCONS_00047516|organism=Clytia hemisphaerica|type=transcript|length=886bp
TTCAAATTGATTCCAACCATCTTCTCTCGTTACGTACATTACCTGAAGTA
TGAGAGAAGATCATTAGCGTCTGATTTTAAAACAGACCTTTTAAAAGAGA
CCTTTAGGGGCTGCGATAACGGACTTTTTGAAGGGTCTTATTTCAAATGG
AACCATTGGGTCTGGAATAGAAGCAGACCTTAACTGGTCTTAAATATCAA
AGGAGACCTTTAGGGGCTGCGATAACGAACTTTTTGAAGGGTCTTATTTC
AAATGGGACCATTAGGTCTGGAATAGAAGCAGACCTTAATTGGTCTTAAA
TATCAAATGAGACCTTTAGGTGTTGTGATTACGGAGGTCTCGTTTCAAAC
AAGACCCATGGGTGTCTAAACCCAGACCCTTAAAAGTCTTTTTCAGAACA
CAAACGTGGTCTTGATGGGCACCACTTAAGGGTCTTATTTGAATCAAGAC
CCTAGAGTCTGATTTGCAACGAAACCTTTTAGGGGCTGCGATAACGGATC
GCTAATTGAGACACCGTATAGGTCTCaggaaaaacctttaaaactgaGAG
TGTGAAATTAGCTAGACTTGTTATCAAGTTCCTTTTCAAATTACCTTAAG
TGTGAGTCAAACAGGGTGACTGGCTAACTGGGAAGTTACTTTTTCAGAAT
CGTAAAATATCTGATAGAGCTGCAAAATAACCCaattaaagtcaaaatta
taTCAGGGGTGAATTTTGCGTCAAAATTTTGCCTGTCAGTGCTCCAAATT
TCATTTGTAACGGTCCAATTTTTACGTAAAAGATAATATCTTACAGCGAG
CGGTACGTTCCCATCGGCGTACTCTAAGGGGAGGTCcgaaatatttgcaa
aatataataaacgggAGGGTCTGAATAAAGGGGGGG Run BLAST on NCBI transcript from alignment at scaffold_130:14221..15106 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047516 ID=TCONS_00047516|Name=TCONS_00047516|organism=Clytia hemisphaerica|type=transcript|length=886bp|location=Sequence derived from alignment at scaffold_130:14221..15106 (Clytia hemisphaerica)
CCCCCCCTTTATTCAGACCCTcccgtttattatattttgcaaatatttcg
GACCTCCCCTTAGAGTACGCCGATGGGAACGTACCGCTCGCTGTAAGATA
TTATCTTTTACGTAAAAATTGGACCGTTACAAATGAAATTTGGAGCACTG
ACAGGCAAAATTTTGACGCAAAATTCACCCCTGAtataattttgacttta
attGGGTTATTTTGCAGCTCTATCAGATATTTTACGATTCTGAAAAAGTA
ACTTCCCAGTTAGCCAGTCACCCTGTTTGACTCACACTTAAGGTAATTTG
AAAAGGAACTTGATAACAAGTCTAGCTAATTTCACACTCtcagttttaaa
ggtttttcctGAGACCTATACGGTGTCTCAATTAGCGATCCGTTATCGCA
GCCCCTAAAAGGTTTCGTTGCAAATCAGACTCTAGGGTCTTGATTCAAAT
AAGACCCTTAAGTGGTGCCCATCAAGACCACGTTTGTGTTCTGAAAAAGA
CTTTTAAGGGTCTGGGTTTAGACACCCATGGGTCTTGTTTGAAACGAGAC
CTCCGTAATCACAACACCTAAAGGTCTCATTTGATATTTAAGACCAATTA
AGGTCTGCTTCTATTCCAGACCTAATGGTCCCATTTGAAATAAGACCCTT
CAAAAAGTTCGTTATCGCAGCCCCTAAAGGTCTCCTTTGATATTTAAGAC
CAGTTAAGGTCTGCTTCTATTCCAGACCCAATGGTTCCATTTGAAATAAG
ACCCTTCAAAAAGTCCGTTATCGCAGCCCCTAAAGGTCTCTTTTAAAAGG
TCTGTTTTAAAATCAGACGCTAATGATCTTCTCTCATACTTCAGGTAATG
TACGTAACGAGAGAAGATGGTTGGAATCAATTTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047516-exon-scaffold_130-1491911889:14221..15106 | TCONS_00047516-exon-scaffold_130-1491911889:14221..15106 | Clytia hemisphaerica | exon |
| TCONS_00047516-exon-scaffold_130-1510915933:14221..15106 | TCONS_00047516-exon-scaffold_130-1510915933:14221..15106 | Clytia hemisphaerica | exon |
| TCONS_00047516-exon-scaffold_130-1575043694:14221..15106 | TCONS_00047516-exon-scaffold_130-1575043694:14221..15106 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_130 | supercontig | scaffold_130:14221..15106 . |
Blast
The following BLAST results are available for this feature:
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