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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047692 ID=TCONS_00047692|Name=TCONS_00047692|organism=Clytia hemisphaerica|type=transcript|length=1103bp
GGTTGGTGGTGCATCAGCATCAGCTCCATCTTTTGAGGAAGCTCTTCTAC
ttatatttctttcttttgtgaaaaagttttttatcattatatacTTTTCT
AAACCAGCAAATTTAAAATGTTAGTAGAGTATGATAAACTGCAATAAACA
ATATATATACCTGGTATAAAAATCCCTACAATACACTTTTCTAAAATCGT
TTTCTCCTCAAACTGGAAACTATTCCATATATTAGAAGCAgaacagaaaa
attgaatgtctttaaaaaatgtaaacattcgaatcacGGGACATTCCATT
ACTGAAATGTGATTGCAGCCTTAGATGTACTGTAGCATGATGACAcacca
aggaaacaaaaatatttttgaatgtaACATTCGAATCGAAATAGAAAATT
CCATAGCTGAAATGTGATTGGAGCCTTAGATGCTTTACAAGATCGGGACA
CAGCAGGAACAAGATTATTTTAGAATgaggtaaaaatgaaaaaagtgatG
AAGAAATATCAGCCGTTGGAACAGAAAGGAACAAGATTAATCCCCCCTCA
AGTAGCAAGGGCTTCCATTTGACCCTTGAGACCAAGTCCCCCCTTATTTC
TCAGTTTTTAACAGTTTTGCCCTTTgtgtttttctctaaattttaaatca
ccccttattttaaggggggggctgaaaccatgtagacgctttaagctttt
ccaagaaaaaaaaaagtgaatagtGCAAAAatttgttgctattgttttcg
aaaatctgcgAAACTTCTGATTGGTCATGCGCTGATattttattgtaatg
tcacgtggccccggtaggatttcctaccccTCGGTAGGATGTTCTACCGA
ACCACGGCTCACTTTCCAGCCGAAGTACTctatctagctcttcgggctag
CCAGGATATGCTTGTAGATCTACTTTCAGTAAACATTCATTTAGTTTCCA
GCCAAAATTTAGAGGCGAATGTTCAACACTTCCCAGGAATGCCAGAACGT
TGCTTTAAAACTGTCGCAGTGACGTATCGAATCcagcactttctttgttt
tcgcgttctatatttttcaatttacgGTTACCACCACACTACTTTTAATC
ATG Run BLAST on NCBI transcript from alignment at scaffold_133:225172..226274 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047692 ID=TCONS_00047692|Name=TCONS_00047692|organism=Clytia hemisphaerica|type=transcript|length=1103bp|location=Sequence derived from alignment at scaffold_133:225172..226274 (Clytia hemisphaerica)
CATGATTAAAAGTAGTGTGGTGGTAACcgtaaattgaaaaatatagaacg
cgaaaacaaagaaagtgctgGATTCGATACGTCACTGCGACAGTTTTAAA
GCAACGTTCTGGCATTCCTGGGAAGTGTTGAACATTCGCCTCTAAATTTT
GGCTGGAAACTAAATGAATGTTTACTGAAAGTAGATCTACAAGCATATCC
TGGctagcccgaagagctagatagAGTACTTCGGCTGGAAAGTGAGCCGT
GGTTCGGTAGAACATCCTACCGAggggtaggaaatcctaccggggccacg
tgacattacaataaaatATCAGCGCATGACCAATCAGAAGTTTcgcagat
tttcgaaaacaatagcaacaaatTTTTGCactattcacttttttttttct
tggaaaagcttaaagcgtctacatggtttcagccccccccttaaaataag
gggtgatttaaaatttagagaaaaacacAAAGGGCAAAACTGTTAAAAAC
TGAGAAATAAGGGGGGACTTGGTCTCAAGGGTCAAATGGAAGCCCTTGCT
ACTTGAGGGGGGATTAATCTTGTTCCTTTCTGTTCCAACGGCTGATATTT
CTTCatcacttttttcatttttacctcATTCTAAAATAATCTTGTTCCTG
CTGTGTCCCGATCTTGTAAAGCATCTAAGGCTCCAATCACATTTCAGCTA
TGGAATTTTCTATTTCGATTCGAATGTtacattcaaaaatatttttgttt
ccttggtgTGTCATCATGCTACAGTACATCTAAGGCTGCAATCACATTTC
AGTAATGGAATGTCCCgtgattcgaatgtttacattttttaaagacattc
aatttttctgttcTGCTTCTAATATATGGAATAGTTTCCAGTTTGAGGAG
AAAACGATTTTAGAAAAGTGTATTGTAGGGATTTTTATACCAGGTATATA
TATTGTTTATTGCAGTTTATCATACTCTACTAACATTTTAAATTTGCTGG
TTTAGAAAAgtatataatgataaaaaactttttcacaaaagaaagaaata
taaGTAGAAGAGCTTCCTCAAAAGATGGAGCTGATGCTGATGCACCACCA
ACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047692-exon-scaffold_133-1491911889:225172..226274 | TCONS_00047692-exon-scaffold_133-1491911889:225172..226274 | Clytia hemisphaerica | exon |
| TCONS_00047692-exon-scaffold_133-1510915933:225172..226274 | TCONS_00047692-exon-scaffold_133-1510915933:225172..226274 | Clytia hemisphaerica | exon |
| TCONS_00047692-exon-scaffold_133-1575043694:225172..226274 | TCONS_00047692-exon-scaffold_133-1575043694:225172..226274 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_133 | supercontig | scaffold_133:225172..226274 . |
Blast
The following BLAST results are available for this feature:
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