TCONS_00048408 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048408
Unique NameTCONS_00048408
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2316

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048408 ID=TCONS_00048408|Name=TCONS_00048408|organism=Clytia hemisphaerica|type=transcript|length=2316bp
GATTCTGTTTTACCCAGAAGGAAGAGAAGTTAGATAATAAAGCAGTCTCC
ACGtttttattttctccttttcgCGGAACTCTATAAGTCACTATTATAAC
TTGTTATGAAGAATATTACTTTCCTTGGAGACGGTACAACAAACTTCACT
CGAAGAAAACAACACAAACGTCGCCATGTTGGATCGAAATGAACGGGACC
GAAAACCTCGATCGAACGGTCGTTACTTCAATAAGCAACGTGCACAACAA
TACTCTCCAACCTCCACCGACACTGGATTGTCCGGATCTCCACCGTATGT
AAACGGAATTAACGGAAGCCGGACTAATCTTACAAATGGCTACAAACCAT
CCTACTCGCCGACATCTACTGATGCTGAATCAGTCTCACCCTTACCTTCA
AATGGGTGGGATTTTTCAGAGCTCGAAATGCGCTACACATCAATGATAAA
TAGCCTAAAAGACGAACTTTCTTTTCTTGAAGAATCAAACACCAATCTAC
TTACGGAGCTACGAGAAAGTCAAAACTCGAATTACGTATTAACGGAAGAA
ATTCGACGTCAGCAACGTAACAACTTAAGTACGTTAGATGAGTTACAAGC
GTGCCAAACAGCAAATTCAGTTCTGAGACAGGAGTTGCAACGTCTTGAGC
AATCCAGCGTTAAAATGTCCAGAGATTCTGAAAAATACAAGAAGGCGAAC
TCGATGCTTAAAGATGAGATCAAAGACCTCAAAGCTCATAACTATAAACG
TAAAAACAGTATGGTTACACTCAAAGAGAAAGCTATTGATCTACAAAATG
ACATTCTAGAAAAAGAGAAGGATTTCAAAGATTTGTCATCTCTCAAACAA
ACTGTCAATATAATAGTCGAAGCGGTCGAAAACGATTCTAACATCGATAA
CGGCTATTTCCCAACCGATTCGGACATTTCTAGTAACGATGGCAACGATG
ATAAACAATTGGGTGCTTTCACTCCAAAACCGGTAAAAAAATCGGATACT
TTCTCAAGTTCTTTGCCTTCACCTCTAGCAAGGAAATTCTTTGCACATCA
AAACGGGGGTAAATCTCCATTACTGAGACGAAAACAGAAAGACAAATACA
ACACTGACCTGACTGAACGATCTCGCTCGAGATCCTTGAACGTGACTTCT
GGGGAAAGCCGGGACGAAAGTCCCTCTCCTCCCCATTACAACGGTCCCTC
ATCCGGCCCTTTACCGGCGGCTGGGGACCGACGACGAGGGTCTCTTGATA
GTTTTCATCAGAATAAGGACTTGAAAGAGACCTCTCTTCGTAACAATACT
TTGACACGACAGTTAGGGAAATCCCTTGAACGACTTCACGATCATAAAAT
CAAACGATCGGAGTCGGGGAATCGCCCACGTAGTATGACGTTTGACGATC
GACATAACGATAAAATGACGGATGACTTTTCTTACGTCGTAAAAGGTGAA
AGTATTGGAACGATCAACTCTGCTTCTCCCGAGCAAGGAACCTTTGAGCT
CTAACATTTCATCTTCCGCGTACGTCTGAAGAAACGATTTAAGTGGATGC
CTAACTCGGATACTACTTTGAATTAATACACCCAGGACGTGTATCTTCGA
GCTCTAACATCTCTTCCATTGAGAATGTACAACCATAACAAGCCAAGATG
TTGTTTGGACGTTATATTAGCGTTCTTTTAACGAATAATGCTCAGGCGAG
AAATAATCTAACATTTCAAATGTTCTAACATTAATTTGTAGAAGGACTTC
AAAGAGACTGACATATGAACAATAAATGAACATGTTACATCTTGGCTCCC
GAAACAACGGATTTAATACACAACGTCCCGCAATATCAATCTAACGTCGT
ACAGATCTTTTTCGATGGATATTGTTAATGTAGGATCACTAGGAAGGCAC
TCATTAACTCAAAAATTATTTGTACGCTTGTATGCGTAGCATCAATGAAG
TCTTTAGTTAGAAGACATTTTTATCTGTACGAAAATATATCTCTAAAGCG
TTCACCATACTTGGAAATGTATCTGGAAATTATCACAACTACTGCTGTAA
AAATACTACTACGAACCGTAAAAATGATCAAGAAGTGAAGTCTGATAGAC
TTTTCAATGGCAAAACAGACcaataaaattttacaactttttactACAGT
TTTGCGTGtttttgtctttaaaaataatatctaaatatcttttaaaaacc
tTCTATAAGAATACCCACGTATTTTTACTTGGCAATATACTAAGAACATA
TTTGACTtaagaattttgtaaaatattgttattttctACAAAACTTTGAA
ACATACTAGAAAATGA
Run BLAST on NCBI

transcript from alignment at scaffold_142:870718..882906-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048408 ID=TCONS_00048408|Name=TCONS_00048408|organism=Clytia hemisphaerica|type=transcript|length=12189bp|location=Sequence derived from alignment at scaffold_142:870718..882906- (Clytia hemisphaerica)
GATTCTGTTTTACCCAGAAGGAAGAGAAGTTAGATAATAAAGCAGTCTCC
ACGTTTTTATTTTCTCCTTTTCGCGGAACTCTATAAGTCACTATTATAAC
TTGTTATGAAGAATATTACTTTCCTTGGAGACGGTAGGAAGAAGGCGGTC
TAATGGTTGACCCTCGATATTGCGTTTTTTATGACCTTTAATTTTCGATT
TCAATCACTGATCAGAAAATAAATTTATAATCATCGTTGAATTTTGTGTT
GCTGACAACGCTCGTTGTAGAAGGGGTATATACCGAGTTTATGTACGTGT
GTTTTTCTGTGACGGGAACAGTAACGTTCTTATTTGTCTAACTCCTGGAC
TAACCGAGGACGACGGTAAATCAGCACTTTTACTCCTCGATCTTGCGGGT
CAAAACTGCGGGTTATTCAAAATCACTTCAGTCACTTTACTGTCCTCAAA
AGTCCAATTTCATTTTAAACGTTCCTTGGTATTGTGGTGTTTGAAGAAAG
ATGTGATGGTACTTCAAACATTCCCCCATAGGCGTAGCGAGATGCCCTGC
AAAATTTATGGATGAGAGTGGTTTTTACGACACTGTAATTATTGTCTTTG
TTTTATCAAAAGATAGTCAATATGTCAAAAACGTCTACACTCCCTCATAA
ATTTTGCAGGGTATCTAGCTACGCCTACGCATGTGGTGACAAAATATGGA
GTTTAGTAATTTGTGTGTGTGTCGATATTTCGGTGTTTTTGGTCCCCGTA
CGCCCCTACCATTGTATATCGACATTGAGCCTCAAAAATACCAAAATATA
AGAATAATTTAAGAGTCTTGAATTGCCTTTCTTAAAGCCTTTTAGGAATC
AGAGAAATAAAAATCCTCAATTTTGAAATATTAGAATAATATAAGAAAAA
ATCAAGGCTCAAAATGCTTAAAAAATTTACTTTGCTACTAAAGTCTGTTC
ACGATAAGTGTGCGCTCTTTTTTCTTTTACCTATAACTTTTAAAGGAATT
CTTCAAGAGTCTAGGTAATGTTCTAGTTGGTGAGTTGGGGAGTTGGGGAG
TTGCTAGTTTCGAGTTGGGAGTTCGTAAAACTTTACGGCGACCGAAAATT
TTCTAATTTAAACTAATGTAGCCCAAAAGTACAAATTTCAAATTAGCCAG
TACCAAACATATTATTGACTTTAAGATCATGAAAATGCCAAAGCCAAGCA
AAGCCAAAATACTTAGTACTGTTATGTCATTGTCATAATGCTGATAACAT
GACACGTTCTTGTGAAAATATTGACAAAATCTTTAAATATAATGATTGTC
AAACAAATTCCCCAAAAAATATTGATCATACTGCTAGTGATGCTTATTGT
ATAAAAGGATATAAGTTGACAGTCATCTTAGCCTCAAAAAATTCGTAGAG
ATAGCTTATAGAGCTAGAAAAATAATGACACTTTCNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNAAAATACAATGGTTCTAAAGTCACTTTAATC
AAGAATTATATTTATACTCAATGTGATGCAGGAAATATAAATGGATATGA
ATTGACAGTAGAAAATAGCTGTCCATGTTCTCAGCGCACGTGTTTAAGGC
AAATAAGCCTATTACAGGTGGTATATGTATTATACGTATTATATGTGTTA
TATATTACTCTCATATTATATTTACTTTCAAAATCGTACTTTTGATGTAT
GTTATTCTTTTTCGGTAGCCGGTAATTTTTTAACTCCCCAACTCGAAACT
AGCAACTCCCCAACTCCCCAACTCGAAACTAGCAACTCCCTAACTCGCGA
CTAGAATAGTTTCCAAACTCATTCTTCAATCTTTATAAATTTGGTATCGT
TGAAGAGATAGTTGTTGGCGGAACAATTTGAAATAAAAAAGTCTTTAAAA
AAATTCTAAAAATATAGATGAAAATAAAGAAGAAAAAAAGGAAGATCTTG
AAGAAAAGTGCTATAACTTTCATTTTCACTGGAGAGATTCTTTGATCTTA
GGAGGTCATCACTGTGAAGAAATTTCACTAAAATATTTATTCAATATAAA
GTTAAGATACAAAGTTAATAAGTGATTGACCCCAAAAAACAGCAAAAAAC
AGCAGAAAGCAGCGTTTTTAGACGTCAATGGAGCTTATAACTTGTTTGAT
ATCTTTTGATTGAATGATTATTTTTGAGAAATTTTTGCACAGGGATGAAC
GTTGGTTGATTAAGGATTCAATTCAGTGAAAATAAAAGTTATAGCACTTT
TTTACAAGATCTTCATTTTTTTCTTCTTCATTTTCATCTACATTTTTAGA
ACTCTTTTAAATATTATTTTATTTCAAATTGTTCCACTCACTAATATCTT
TCCAATGATACCAAATTTATAAAGATTGAAGAATTCCTTCATAAGTTATA
GGTAAAAGAAAAAAGAGTGCACACTTATCGTGAATAGACTTTAGTGAGAT
GCATCTTNTAAGTTATAGGTAAAAGAAAAAAGAGTGCACACTTATCGCGA
ATAGACTTTAGTGGCTGTAACTTTCGATGCAATTGATGCAATGATTCATA
GATAGAAATTAAAATTACTGTTTTATGTAGGCCTTGGACATCCTTACCTC
AAGTTAGAAAAAAAAAACTCTACAGCTTTCTTCATCTTCAAGAGGTAAGG
TTGAGCCGTAACTCTTCTATAAAAGGAACAAAAATTGATCAGTAGTAATT
AAAAAGCAATCAAAAATAAACAATGGAAAAAACGTTAATTAGTGTCAATT
AAGAAACAAATTCTTTTTATCCTCTATTTCATCTTGTATGTTGTTATGAG
AGTTGCAATTTAGTGAAAGATTTTCGTGGTCAGATTTGTGTTAAAAGATT
TCGTTGCAAGGCTTGGTAGCTGAAAAGTTGCTTGAAAGATTTTTTTGGGG
GAGCGAATCGGTAATGTCAGGAGTCAAAATGCAAAATGGCAGCGTACCTG
TCAAAGGCAGAAAAATTGATTCCAAATTAAAACTGAAAGTAGGTTTAAAA
TTTTCATGTTATAAAAATTATTCCTTCTAGCGATATATAGAGGACTTTTA
CAGGGCAGGGTTGGCCACTTAGACAAAATTGGGTACAAGGAGGTGCCACT
GGTCGTGGTCCCATTTTTTAGGCTCTGAAGATATCTGACAGGGTCTTAAA
TTTACGGATCAGGTCCGGTTGAACTGGTCGCTGGTTGGATTCTTTTCAGG
ATGGAAATTAGAAAATTTTGCGTTCACTTTTAGTCATTTGAGCCACTTTC
TAGGGTGAAAATGGGAAATTTTTTCGATTTTTCTTTCTGACAGGGTCCCA
AATTTTCCAGATATTCATATCTGACAGGGTCCATTTTTCAAACTTTAGCG
ACACGTCCCCGTCGGCCGTCAAAGTCAGTGCCCCCCGGGTTTTCATATTT
CTGTGTACCGGAATGCCACTATGTACACGTTTGTTTTACAAAACGTGTAC
GTGTTTTTCTCAGTGACTCGGTGACGAAAATGGCCCTTCACGATTGGATA
AAATTATAAGAAGAATATAACAACATACAACGGATAGGGGGAGTGCTTTA
AAATCCGTTAGTTTTTAATGAGTGGGGAATTCTAGTCCACAATCCAGAAA
ACTCGTTTGGGATAACAAAATTTCTCAGTATGTTTCCCCTAAGAGTAAGA
GAGCTCAGCTTAATCTCTCAATGTAGATGTAATTTTGTGGGAAGTTATTT
CTTAAAAGGGAATTTTCTATATAGCCATAAACAATTGTTTCCATCTAGGC
TAAGGGGTCAATATGTTATATTGATGAAGAAAAATCAGAGCCTTCTCATA
AAGATATAGTATCAAAGACGATAGTTAATCGCGTGGGAACACTAAATACG
TGACATCGAATGGTTCAAATATATCGGAAAGGATATTGAGTATTTACGAA
ATCAAAAAGAGATCTAAGAAGGAGTGGTCTGGGTCGTAATGATCTCCTAT
TTCTGGGTTTGAAGCACTCTTCCACAGTGTCGTTTGCTTTCATTTCGGCA
TTTGTTTTCCTGAAAACGGGATTTGCGTCAACAAGTTTCATAATTGCTAC
ATTTTTTGTACCAGGAAGAAAATTTCGTTTTATGAAGAAACATTTTGAAA
AAATTAATGATTTCTTTTTTTTTGCATCCGAGGGGTTTTAAAATTGAGAA
ATCCGTTACTTTGAAATTCAAAGGAGAGAAACATAATATTTCATAAGGAA
ATTCAGTATATTTTTCTAATTAGGATAAAATTGCAGAACGATATTTTTCT
CTGCAGATGAACCTTTGACTAACCTTTCCAGAAAGAAGTGATGCTTGAAC
CCGGTCTGCAGCACATGCACGTGAATATTGCAAGGTGATTATCCGACGGA
GAGATGGAAGTTTAGTTCTCAGTAAAAGTAGAATTGATCAAAACTGAAAC
ATCAGCTTTTTTTCAGCTATTTTTCTGTCTTCACTGAATTTTCTGATTTG
AAAACAATGGAATTCAAATCCCAGCAAGCCTATGCAATATCTATCTCCGT
CAAACACCCCTGTCTCACAGCCCCGGTGAAACTTTTTTCCTCATGGGGAT
AAAAACTCCTATTGAAATCCCAATGGGGATAGAAATTCTATTGGGTTCTA
AGGTTAAAAAAATTCAGTGGGGATGTGTTTTGAGTGCAATTTTTAAACAT
TGAATTTCGAATGGGGGTGAAATCAAAGTCAATTTCCCAGTGGAGCTGAA
ATTTCAGGGTATTTTCCCACCAAAGATTTTCCTGTTGGGCTGGGGTCTTA
GTGGGTCTGACACAGGGGTGACATCGAGCTTCAGTCCGTAATTTTTACCC
CCATTGGTTGAAAATCCTACTGGGTCTTTGAGGAGGGGGTGTCTGTGTAG
GTTGGCTAAATCTCTTAAGATAAAAAGGAAATGTCAAGAAATACCAAAGA
AGCTTATCTCTAATCTGTTCCGTATAAATGCCAGAAGTTAAACCGTGACA
TTTGAATTCAAAAAGAACTATGTAGATAAAATGGAGAAGAAATCCTTGAA
AAGGAATTAGAATTTGATTTCTTGTACGTCAAATTCAGATTAAAAGAGAC
GTAAATGTTTTCATTATTTTTCGTAGGGTATGCTGGTTTTTTATTGTTGA
CTTAAGTACTGGAATCTCACTGGACTTTTTTAATTGCTTTTTAATTCTGA
TGTTATGACGTTGGGAAGCATTCTTCCATCGTTGGTTATGGGCTCTTCTA
GCAAAAATACCTAGGAGGTTAAAGATGTACACTTTATTTTTTTATAAGAA
CAATGAGGCTCAAAAATGCGAAAAAATAAGAACAATTTAAGAACAGTGGA
GAGGCTGAAGTTAGAGAGTTATAGCAAAAAGAATAACTGGTTTCTAAAAT
CCTCTAAATAGTAAAGTAAATAGCCAAAACTTGTTTTTTACCTTAGAAAA
AATAAGAACAAAATAAGAACAATTCAAGGCTCAAAATGCCAAAAAAATAA
GAAAAGCCGAGCGTCAGCAAAAATTTACTGGCAAAAAAAGAGGTGTATTT
TCAGCGTATTGCGATGGAAAATTGTGAAAAACTGTAGATTAAATTTGCAT
TGTCCAGGGGTAAATTTTAAATGCCCACTCACTGAAAAAATAAAATATTG
AGCGGGTTTAACTTTAGTTCAGTAGAGCCAGGTCTGTAATCAGCTTTCCT
GAAATTTAACTCCTTTTGTTTTAGTGCTTTTACGATTTTGAAGGCGAAGT
TATTTTAAAGCTTGCTCGAGTTAGGGAAACATTCGAGTTATAGAGGTCTG
AGTTAAAGAGTCTCTACCGTAGTTGAAATTGATGAAAAGTCACGTGATCC
TAGTATGTAAAGAAATGTTGAAACATATTTGAAAAGTCTTTTTCGATGCC
ATGTTTCGGAAATCAAAATAATACCTGGCTAATTAAGCACTAATTAAAAA
TTTATTGTTCAGCCTACAATTTCAAAAAGTTCGAAGGAAATTGGTATAGC
TCACTATGATAAAAAAGAATTCCAAAATTTTATTTTTTGTTTTTCTTTTA
ATTTGTTTGTTGTTGTTTTCGATGGTCATTAAATGCTTCGAGCAATAAAT
AAACAGTTCAGTAGTAAAGTTTTGTACTTTGTTGAGAGAAGATCTTGAAG
GATTTTAAATCAACTTTTTCTTCTGACCTAAATTTCACTTGAATACCACA
AAGATTGTATATCAATGTTACTACAAACGGTCGAGGTAAACATTATCAAT
TGCTTTTGAAAATTTGATTTTGACTTAAATTTCTAGGACCATACTTGACT
AACTTTCATGGGTCTCTCCAGTACGTTTTCAATGACTTTTTAAACCTTTT
GATTTTGACAACTGTAGTCTTTTTAGGCCACACCCACTCATCAATGCAAG
AATCTCTTATTCTCGGCAAACTTTGAAAGTCTTTGTGAGGTTTTCAGGAT
AAACAAGTCCGAAACATACCATTTAACCATTTAAAATTGCTTTATAAGAG
GAACTGTGAATCGCACAGTTAGTCTTGACCACAATAAAGACTATGAAGTT
TCCTTTTATCGCCAAATGGAACAAATATAAAAGATAGTTATAGCATTCTC
CTTGTATCAAACTAAATTTTGACTCTGGTCAAAGGGGTTGTATTTTTTGA
TTGAGCAAAGTAGATAGCGTTGAGGACATTTTTCAAAAAAAAATATTTTG
GAAGTTCTAATTCTATCGGATTTGAAGTGTAAGTATACTCTTGTCTCCNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCAGAACTTTTTTTAACAACAACAA
AAAAGAAACTTTAGCAAATGAACACGTAAAATAAGAACCAATACTAACAA
AAAAGGAAAATTTTAATACGTTTAAGGTCTATCTACACTTTAATAAAATA
TTGAACTATTCGAATTTAATTGGCGGGGGGGACGTCTATTCGGGAGACAA
GAGTAGGTAAGGTAATGCTATTAGCCACATTTTATCATGTGATTCAATTT
TGATGATTTAACTTTTGACAACAATAGTTTTGTCATCAGCAGTTCATAGG
GTTACTGTGAAAGAAGATTGTAGATTTCTTTTTTGAAATTGCGGGGATTG
TTGGCTATGTAGACGACATATCTCACCGCACATTGTTAATTTTATCCTGT
AACATCGACAAAGATTTTTCATAATTTATCACTGTCAGAATTGTGTAAAT
TATTCAAAATAATTGTTACGAATAAATTCTCTAATCACCGAAAAACATCA
GATGTTGACAACTTTCAAACTAGTCAACAATCATTCCTCTAAATACGGAA
ACATGCAATCACGTCATACAGTAGGAAAAAAACTTTCATAATTAAGGAGG
TTATTTAGTGGCTTTTTCAGGAAGAAATACCGAAATTAAGCAGATAGTCA
TTAAAAATATACTCATTATATGCAAAATGTTTTACTGTATTTAGAGCATG
GTGCCACATTGGCTTTTGATTATTTTGTTCTAGAGAGGGGAGTGACTGTT
GGATATGAACGGTGTTCTGCGTAATGTGATATGATGATATCTATGTTGTC
GAACGATTTGAGGGTTTTATTAAGTCGAGGAATGAATACATAATCAAAAT
ATTGAATTGATGAAGTGATTGAATGAATTTAGCCATGAAAATTTTTAATG
ATTGTGGTTAGAGTCTGATGCCACACTACGTTGTTTGAGGGTCCATCTAA
TGTCTACAACACCCATCTTACATCTTTGACGTTGATTGGACGTTAAATGA
ACGTTGAAACAACGCCGTGTGTCAGTTGGGAGTTTGTATAAGGCATCTTT
GTTGAGTCAACATCAGTATTAGGCATTAAAATTTGAATAAGGTATTTTCT
GTTGGAAAAAGTTTTGCTAAAAGTTAACTACTAACCTTTGAAAACTTCAA
ACTATTTTGACAAAAACTCGCCAAAATAAAAACTTTTGAAACTATGCAAA
GTTTTTGGGTCACCTATTAGAATATCTCATCTTTGTTTCCCAGGTACAAC
AAACTTCACTCGAAGAAAACAACACAAACGTCGCCATGTTGGATCGAAAT
GAACGGGACCGAAAACCTCGATCGAACGGTCGTTACTTCAATAAGCAACG
TGCACAACAATACTCTCCAACCTCCACCGACACTGGATTGTCCGGATCTC
CACCGTATGTAAACGGAATTAACGGAAGCCGGACTAATCTTACAAATGGC
TACAAACCATCCTACTCGCCGACATCTACTGATGCTGAATCAGTCTCACC
CTTACCTTCAAATGGGTGGGATTTTTCAGAGCTCGAAATGCGCTACACAT
CAATGATAAATAGCCTAAAAGACGAACTTTCTTTTCTTGAAGAATCAAAC
ACCAATCTACTTACGGAGCTACGAGAAAGTCAAAACTCGAATTACGTATT
AACGGAAGAAATTCGACGTCAGCAACGTAACAACTTAAGTACGTTAGATG
AGTTACAAGCGTGCCAAACAGCAAATTCAGTTCTGAGACAGGAGTTGCAA
CGTCTTGAGCAATCCAGCGTTAAAATGTCCAGAGATTCTGAAAAATACAA
GAAGGCGAACTCGATGCTTAAAGATGAGATCAAAGACCTCAAAGCTCATA
ACTATAAACGTAAAAACAGTATGGTTACACTCAAAGAGAAAGCTATTGAT
CTACAAAATGACATTCTAGAAAAAGAGAAGGATTTCAAAGATTTGTCATC
TCTCAAACAAACTGTCAATATAATAGTCGAAGCGGTCGAAAACGATTCTA
ACATCGATAACGGCTATTTCCCAACCGATTCGGACATTTCTAGTAACGAT
GGCAACGATGATAAACAATTGGGTGCTTTCACTCCAAAACCGGTAAAAAA
ATCGGATACTTTCTCAAGTTCTTTGCCTTCACCTCTAGCAAGGAAATTCT
TTGCACATCAAAACGGGGGTAAATCTCCATTACTGAGACGAAAACAGAAA
GACAAATACAACACTGACCTGACTGAACGATCTCGCTCGAGATCCTTGAA
CGTGACTTCTGGGGAAAGCCGGGACGAAAGTCCCTCTCCTCCCCATTACA
ACGGTCCCTCATCCGGCCCTTTACCGGCGGCTGGGGACCGACGACGAGGG
TCTCTTGATAGTTTTCATCAGAATAAGGACTTGAAAGAGACCTCTCTTCG
TAACAATACTTTGACACGACAGTTAGGGAAATCCCTTGAACGACTTCACG
ATCATAAAATCAAACGATCGGAGTCGGGGAATCGCCCACGTAGTATGACG
TTTGACGATCGACATAACGATAAAATGACGGATGACTTTTCTTACGTCGT
AAAAGGTAATGTTTAATGACTATGACATGACGGAACTGACGAATCGTTTT
TATAGAAAATCTACGTTTATTTGTTTCAACAAGCTTATAGTGACTACCGC
ATGTTTTTCAGACGTGTAGGGCTGCAATACACATATTTCCTATTAGCAGA
TTCATGCAAAAGTCACGAAAGACGTCGAGTAAACAAACTTTTGATTGGCG
GAGGGATGCAAAGATTACCTCTTACATGGACAATTTGAAAAAATATGCTT
GTATGTGCAATATTTCAGCCAATCAGAGACTTTCTCGACGTTTTTCGTGA
CTTTTTTACACGAATCCGCTAATAGGAAATAGGTGTATTCCCTTTATCAA
CCTTCGTATAAAGAAATCGATTTAAGCTCCCCTGCTAGGCATTTTCGTAC
CCAGAGTCTCTTACACCACTTTTTGATTGTGCTGATGGATGTGATACAAT
CGTGAACGCTATTAGATTCATCGAAAAAGCGAAATAAGGGACTGGGTTCG
AGTCTACCTATTTTCTAAATGCAAAACTTTTCATGATCTTATAACTGAAT
GTTCTTCAATTTTTAATGCTCTTGTGTTCTTATAAGTAAATGTTCCTTCT
TTGACTTTTAACGTTATATATAACTAACTACAGTTGACTTTCTCTAATTC
GATCTCAAAGCACAAAATATTATCTTCGAATTAGAGAACGATTCGAATTA
CAGAGAGTAATTTATTTCATTCTCAAGCCGGGGGACCAATGTTTTAGTTT
TAGTTTCGAAAAAACTTAAATAATAGGAGTTCGAACTAGAGAGAATTGAC
TGAAGAAAAATGGTCTACCTTTTCGATGTTTTATCTAAAAATATGTTCTG
TATTTGATGTTCTTTTAGGTGAAAGTATTGGAACGATCAACTCTGCTTCT
CCCGAGCAAGGAACCTTTGAGCTCTAACATTTCATCTTCCGCGTACGTCT
GAAGAAACGATTTAAGTGGATGCCTAACTCGGATACTACTTTGAATTAAT
ACACCCAGGACGTGTATCTTCGAGCTCTAACATCTCTTCCATTGAGAATG
TACAACCATAACAAGCCAAGATGTTGTTTGGACGTTATATTAGCGTTCTT
TTAACGAATAATGCTCAGGCGAGAAATAATCTAACATTTCAAATGTTCTA
ACATTAATTTGTAGAAGGACTTCAAAGAGACTGACATATGAACAATAAAT
GAACATGTTACATCTTGGCTCCCGAAACAACGGATTTAATACACAACGTC
CCGCAATATCAATCTAACGTCGTACAGATCTTTTTCGATGGATATTGTTA
ATGTAGGATCACTAGGAAGGCACTCATTAACTCAAAAATTATTTGTACGC
TTGTATGCGTAGCATCAATGAAGTCTTTAGTTAGAAGACATTTTTATCTG
TACGAAAATATATCTCTAAAGCGTTCACCATACTTGGAAATGTATCTGGA
AATTATCACAACTACTGCTGTAAAAATACTACTACGAACCGTAAAAATGA
TCAAGAAGTGAAGTCTGATAGACTTTTCAATGGCAAAACAGACCAATAAA
ATTTTACAACTTTTTACTACAGTTTTGCGTGTTTTTGTCTTTAAAAATAA
TATCTAAATATCTTTTAAAAACCTTCTATAAGAATACCCACGTATTTTTA
CTTGGCAATATACTAAGAACATATTTGACTTAAGAATTTTGTAAAATATT
GTTATTTTCTACAAAACTTTGAAACATACTAGAAAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030795XLOC_030795Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048408-exon-scaffold_142-1575043694:882774..882906TCONS_00048408-exon-scaffold_142-1575043694:882774..882906Clytia hemisphaericaexon
TCONS_00048408-exon-scaffold_142-1575043694:872452..873763TCONS_00048408-exon-scaffold_142-1575043694:872452..873763Clytia hemisphaericaexon
TCONS_00048408-exon-scaffold_142-1575043694:870718..871588TCONS_00048408-exon-scaffold_142-1575043694:870718..871588Clytia hemisphaericaexon
TCONS_00048408-exon-scaffold_142-1510915933:882774..882906TCONS_00048408-exon-scaffold_142-1510915933:882774..882906Clytia hemisphaericaexon
TCONS_00048408-exon-scaffold_142-1510915933:872452..873763TCONS_00048408-exon-scaffold_142-1510915933:872452..873763Clytia hemisphaericaexon
TCONS_00048408-exon-scaffold_142-1510915933:870718..871588TCONS_00048408-exon-scaffold_142-1510915933:870718..871588Clytia hemisphaericaexon
TCONS_00048408-exon-scaffold_142-1491911889:882774..882906TCONS_00048408-exon-scaffold_142-1491911889:882774..882906Clytia hemisphaericaexon
TCONS_00048408-exon-scaffold_142-1491911889:872452..873763TCONS_00048408-exon-scaffold_142-1491911889:872452..873763Clytia hemisphaericaexon
TCONS_00048408-exon-scaffold_142-1491911889:870718..871588TCONS_00048408-exon-scaffold_142-1491911889:870718..871588Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:870718..882906 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.0974373	2.59619	0	0.00458417	0	0	0	0	0	0	0.318066	0	0.614065	0.270098	1.8895e-05	0	0	0	0	0	0	2.58485e-06	0	0	0.374605	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048408 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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