TCONS_00048411 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048411
Unique NameTCONS_00048411
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2531

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048411 ID=TCONS_00048411|Name=TCONS_00048411|organism=Clytia hemisphaerica|type=transcript|length=2531bp
GTCAGAAGCTGTCATTGTGTCAATTGCtattcttgaaaattttgtttttc
gacGTGTACTAAAGACCTTGGagatgtttgtttacattcttaATGGGTAG
CTGGGTGACATTAAGGGTATCTTTTTATTAGTGTGAAGATATTAAGTACA
TCGCTGTAGCTACAGGTCATACCGGAAAAGTGGAAAAACATTTCGGACAA
TTTTCAAAAGTTCTTGCCATTTGTTTTGTTGATGGTCAGAAGAGATTAAT
TTTTCTACTTTCCACTACACCGTAAATTTCTCCTGTTAATTTGTTTAAGT
GTTTAACTGAGGATGATGGTGGAAAAACAAGATGCTGTTCACAAATGGGT
ACAACAAACTTCACTCGAAGAAAACAACACAAACGTCGCCATGTTGGATC
GAAATGAACGGGACCGAAAACCTCGATCGAACGGTCGTTACTTCAATAAG
CAACGTGCACAACAATACTCTCCAACCTCCACCGACACTGGATTGTCCGG
ATCTCCACCGTATGTAAACGGAATTAACGGAAGCCGGACTAATCTTACAA
ATGGCTACAAACCATCCTACTCGCCGACATCTACTGATGCTGAATCAGTC
TCACCCTTACCTTCAAATGGGTGGGATTTTTCAGAGCTCGAAATGCGCTA
CACATCAATGATAAATAGCCTAAAAGACGAACTTTCTTTTCTTGAAGAAT
CAAACACCAATCTACTTACGGAGCTACGAGAAAGTCAAAACTCGAATTAC
GTATTAACGGAAGAAATTCGACGTCAGCAACGTAACAACTTAAGTACGTT
AGATGAGTTACAAGCGTGCCAAACAGCAAATTCAGTTCTGAGACAGGAGT
TGCAACGTCTTGAGCAATCCAGCGTTAAAATGTCCAGAGATTCTGAAAAA
TACAAGAAGGCGAACTCGATGCTTAAAGATGAGATCAAAGACCTCAAAGC
TCATAACTATAAACGTAAAAACAGTATGGTTACACTCAAAGAGAAAGCTA
TTGATCTACAAAATGACATTCTAGAAAAAGAGAAGGATTTCAAAGATTTG
TCATCTCTCAAACAAACTGTCAATATAATAGTCGAAGCGGTCGAAAACGA
TTCTAACATCGATAACGGCTATTTCCCAACCGATTCGGACATTTCTAGTA
ACGATGGCAACGATGATAAACAATTGGGTGCTTTCACTCCAAAACCGGTA
AAAAAATCGGATACTTTCTCAAGTTCTTTGCCTTCACCTCTAGCAAGGAA
ATTCTTTGCACATCAAAACGGGGGTAAATCTCCATTACTGAGACGAAAAC
AGAAAGACAAATACAACACTGACCTGACTGAACGATCTCGCTCGAGATCC
TTGAACGTGACTTCTGGGGAAAGCCGGGACGAAAGTCCCTCTCCTCCCCA
TTACAACGGTCCCTCATCCGGCCCTTTACCGGCGGCTGGGGACCGACGAC
GAGGGTCTCTTGATAGTTTTCATCAGAATAAGGACTTGAAAGAGACCTCT
CTTCGTAACAATACTTTGACACGACAGTTAGGGAAATCCCTTGAACGACT
TCACGATCATAAAATCAAACGATCGGAGTCGGGGAATCGCCCACGTAGTA
TGACGTTTGACGATCGACATAACGATAAAATGACGGATGACTTTTCTTAC
GTCGTAAAAGGTGAAAGTATTGGAACGATCAACTCTGCTTCTCCCGAGCA
AGGAACCTTTGAGCTCTAACATTTCATCTTCCGCGTACGTCTGAAGAAAC
GATTTAAGTGGATGCCTAACTCGGATACTACTTTGAATTAATACACCCAG
GACGTGTATCTTCGAGCTCTAACATCTCTTCCATTGAGAATGTACAACCA
TAACAAGCCAAGATGTTGTTTGGACGTTATATTAGCGTTCTTTTAACGAA
TAATGCTCAGGCGAGAAATAATCTAACATTTCAAATGTTCTAACATTAAT
TTGTAGAAGGACTTCAAAGAGACTGACATATGAACAATAAATGAACATGT
TACATCTTGGCTCCCGAAACAACGGATTTAATACACAACGTCCCGCAATA
TCAATCTAACGTCGTACAGATCTTTTTCGATGGATATTGTTAATGTAGGA
TCACTAGGAAGGCACTCATTAACTCAAAAATTATTTGTACGCTTGTATGC
GTAGCATCAATGAAGTCTTTAGTTAGAAGACATTTTTATCTGTACGAAAA
TATATCTCTAAAGCGTTCACCATACTTGGAAATGTATCTGGAAATTATCA
CAACTACTGCTGTAAAAATACTACTACGAACCGTAAAAATGATCAAGAAG
TGAAGTCTGATAGACTTTTCAATGGCAAAACAGACcaataaaattttaca
actttttactACAGTTTTGCGTGtttttgtctttaaaaataatatctaaa
tatcttttaaaaacctTCTATAAGAATACCCACGTATTTTTACTTGGCAA
TATACTAAGAACATATTTGACTtaagaattttgtaaaatattgttatttt
ctACAAAACTTTGAAACATACTAGAAAATGA
Run BLAST on NCBI

transcript from alignment at scaffold_142:870718..884930-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048411 ID=TCONS_00048411|Name=TCONS_00048411|organism=Clytia hemisphaerica|type=transcript|length=14213bp|location=Sequence derived from alignment at scaffold_142:870718..884930- (Clytia hemisphaerica)
GTCAGAAGCTGTCATTGTGTCAATTGCTATTCTTGAAAATTTTGTTTTTC
GACGTGTACTAAAGACCTTGGAGATGTTTGTTTACATTCTTAATGGGTAG
CTGGGTGACATTAAGGGTATCTTTTTATTAGTGTGAAGATATTAAGTACA
TCGCTGTAGCTACAGGTCATACCGGAAAAGTGGAAAAACATTTCGGACAA
TTTTCAAAAGTTCTTGCCATTTGTTTTGTTGATGGTCAGAAGAGATTAAT
TTTTCTACTTTCCACTACACCGTAAATTTCTCCTGTTAATTTGTTTAAGT
GTTTAACTGAGGATGATGGTGGAAAAACAAGATGCTGTTCACAAATGGGT
AAAAAACTTTCATTATTTTATTGAAGATTCTTTGATAGAATCAACTTTTG
TATTACGCCTTATTATAAAAGAAAACCAATTTTTTTGAAATCACTTCAGA
AATTTAGAAAAAAAGATCCCCTTTACCCAACTGCAATGTCCAATCCAGTG
TGTACGGCCATCCCACCGTTCATTGAACATTAGCGAGTTTATGTATATGC
GCTTTTGAAGACGTTAAAGTGACTGAAGCGATTTGGAATAACCCGCAGTG
CTGCCCTGCAAAATCGAGGATGGTAAAGTTGCTGATTTACCGTCGATTTT
ACCGTTCATTTTACGTCCTCGGTTGGTCAGGATGTAGACAAATTAAAACC
TTACCGTATCCGTCGTAGAAAAACACACATACATAAACTCGGTATTACAA
ATGGGGGAACGGGAAAAATAGCTGGGAATTCGTTTTTTTCTTATGATTTT
TTTCTATGATTGTGAAAGCCTCTAAATTTTGAGTTCGTGCTTTTGAAGGT
AAAAATATCATTAAGAGTAATTTCACGCATGAAAAACTAATTTGATTCAA
ACTCGAACTCAGTCCATTTAGTCCGCTCTTGAAAACCACTACAATAGACG
ATATTGCGTTTAGATAAATGCAATGCATTCTTGTTTCTCGGGGACCCTTA
AGGGAATTATAATCTATTCCAGATCATTATATAATCGACATTATAATTCC
TTTGAGAGTCCCCGAGAAACCAGAATGCATTGCATTTATCTAAACGCGAT
ATCGTCTATTGTACTAACGTCCATCGGTAATAAAAAAAACGTGGTGCAAG
TGGGTTCGGGTAAGTACGCGATTGAATTTAAATGGTAATCGAACTTACCG
AAAATGTTTTTTTCCGTCATCGGTAGCGTCAAGCAGTTTTTTAAGCACGC
ACAGAGGAAGTACTGAACGCTTTTGCAACGAATTTTCAATTCGATTGTTG
ACGTCAGCTAAAAGCCGCGGTGACTTTGATAAAATGTTTCTTATCTAATC
ACTTAAAGTCAACTGCTCCAATTACGAAAACATATTGGAAAATTCTTGAA
TGCCAAGTTTGACGCAGTAGATCAATTCATTTCGTTTGCTTTTGACGTTC
AAAATATTTGATACATTTATAAATACTGACTTGAATGACTCTTATAGTGC
TTATGTTGAATCATGGTTTAGTTGTAACAGTTAGTTAGAAGAATCTGGAT
CGAAATGCTTTTTACATCTGCCTGAAGGCTTTATAATTAATTGATCGTAG
ACTTTGGCAGACCATGAGTGTTTTCTGACCAACACGCTGAAGCTCTTAAA
GAGATAGATGAAAACAAACAATCTGACGAATTAGCTATCAAACTCATATT
TCGTAAAGACCGCATATTGAAATTGGACAAAAAAGTCGTTGCGAGATTTT
GTTAAAATAGGGCCCTTAAATGGTTAATCTTAAGCTACTTACTACTGCAC
GGTTTACCGTATGCGTAAGAAAGTTATGGTTGTCTGTTACAAGAGGTCAC
ATGTTCCACAAATGTACTGAGCAATAGTGTAGATGAAATCTTAAAATGGA
ATCCTTAACCTCAAAGTTTAGTGTAGTAGGTCGTCAAGTTTTGTTGGTCG
GGATTGCCAGCTAAACTTCCAATGACATAACATGTATTTTTAAACTATGT
TATACAATGTGGAAATCTAAACTTGATTCTGTTTTACCCAGAAGGAAGAG
AAGTTAGATAATAAAGCAGTCTCCACGTTTTTATTTTCTCCTTTTCGCGG
AACTCTATAAGTCACTATTATAACTTGTTATGAAGAATATTACTTTCCTT
GGAGACGGTAGGAAGAAGGCGGTCTAATGGTTGACCCTCGATATTGCGTT
TTTTATGACCTTTAATTTTCGATTTCAATCACTGATCAGAAAATAAATTT
ATAATCATCGTTGAATTTTGTGTTGCTGACAACGCTCGTTGTAGAAGGGG
TATATACCGAGTTTATGTACGTGTGTTTTTCTGTGACGGGAACAGTAACG
TTCTTATTTGTCTAACTCCTGGACTAACCGAGGACGACGGTAAATCAGCA
CTTTTACTCCTCGATCTTGCGGGTCAAAACTGCGGGTTATTCAAAATCAC
TTCAGTCACTTTACTGTCCTCAAAAGTCCAATTTCATTTTAAACGTTCCT
TGGTATTGTGGTGTTTGAAGAAAGATGTGATGGTACTTCAAACATTCCCC
CATAGGCGTAGCGAGATGCCCTGCAAAATTTATGGATGAGAGTGGTTTTT
ACGACACTGTAATTATTGTCTTTGTTTTATCAAAAGATAGTCAATATGTC
AAAAACGTCTACACTCCCTCATAAATTTTGCAGGGTATCTAGCTACGCCT
ACGCATGTGGTGACAAAATATGGAGTTTAGTAATTTGTGTGTGTGTCGAT
ATTTCGGTGTTTTTGGTCCCCGTACGCCCCTACCATTGTATATCGACATT
GAGCCTCAAAAATACCAAAATATAAGAATAATTTAAGAGTCTTGAATTGC
CTTTCTTAAAGCCTTTTAGGAATCAGAGAAATAAAAATCCTCAATTTTGA
AATATTAGAATAATATAAGAAAAAATCAAGGCTCAAAATGCTTAAAAAAT
TTACTTTGCTACTAAAGTCTGTTCACGATAAGTGTGCGCTCTTTTTTCTT
TTACCTATAACTTTTAAAGGAATTCTTCAAGAGTCTAGGTAATGTTCTAG
TTGGTGAGTTGGGGAGTTGGGGAGTTGCTAGTTTCGAGTTGGGAGTTCGT
AAAACTTTACGGCGACCGAAAATTTTCTAATTTAAACTAATGTAGCCCAA
AAGTACAAATTTCAAATTAGCCAGTACCAAACATATTATTGACTTTAAGA
TCATGAAAATGCCAAAGCCAAGCAAAGCCAAAATACTTAGTACTGTTATG
TCATTGTCATAATGCTGATAACATGACACGTTCTTGTGAAAATATTGACA
AAATCTTTAAATATAATGATTGTCAAACAAATTCCCCAAAAAATATTGAT
CATACTGCTAGTGATGCTTATTGTATAAAAGGATATAAGTTGACAGTCAT
CTTAGCCTCAAAAAATTCGTAGAGATAGCTTATAGAGCTAGAAAAATAAT
GACACTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATAC
AATGGTTCTAAAGTCACTTTAATCAAGAATTATATTTATACTCAATGTGA
TGCAGGAAATATAAATGGATATGAATTGACAGTAGAAAATAGCTGTCCAT
GTTCTCAGCGCACGTGTTTAAGGCAAATAAGCCTATTACAGGTGGTATAT
GTATTATACGTATTATATGTGTTATATATTACTCTCATATTATATTTACT
TTCAAAATCGTACTTTTGATGTATGTTATTCTTTTTCGGTAGCCGGTAAT
TTTTTAACTCCCCAACTCGAAACTAGCAACTCCCCAACTCCCCAACTCGA
AACTAGCAACTCCCTAACTCGCGACTAGAATAGTTTCCAAACTCATTCTT
CAATCTTTATAAATTTGGTATCGTTGAAGAGATAGTTGTTGGCGGAACAA
TTTGAAATAAAAAAGTCTTTAAAAAAATTCTAAAAATATAGATGAAAATA
AAGAAGAAAAAAAGGAAGATCTTGAAGAAAAGTGCTATAACTTTCATTTT
CACTGGAGAGATTCTTTGATCTTAGGAGGTCATCACTGTGAAGAAATTTC
ACTAAAATATTTATTCAATATAAAGTTAAGATACAAAGTTAATAAGTGAT
TGACCCCAAAAAACAGCAAAAAACAGCAGAAAGCAGCGTTTTTAGACGTC
AATGGAGCTTATAACTTGTTTGATATCTTTTGATTGAATGATTATTTTTG
AGAAATTTTTGCACAGGGATGAACGTTGGTTGATTAAGGATTCAATTCAG
TGAAAATAAAAGTTATAGCACTTTTTTACAAGATCTTCATTTTTTTCTTC
TTCATTTTCATCTACATTTTTAGAACTCTTTTAAATATTATTTTATTTCA
AATTGTTCCACTCACTAATATCTTTCCAATGATACCAAATTTATAAAGAT
TGAAGAATTCCTTCATAAGTTATAGGTAAAAGAAAAAAGAGTGCACACTT
ATCGTGAATAGACTTTAGTGAGATGCATCTTNTAAGTTATAGGTAAAAGA
AAAAAGAGTGCACACTTATCGCGAATAGACTTTAGTGGCTGTAACTTTCG
ATGCAATTGATGCAATGATTCATAGATAGAAATTAAAATTACTGTTTTAT
GTAGGCCTTGGACATCCTTACCTCAAGTTAGAAAAAAAAAACTCTACAGC
TTTCTTCATCTTCAAGAGGTAAGGTTGAGCCGTAACTCTTCTATAAAAGG
AACAAAAATTGATCAGTAGTAATTAAAAAGCAATCAAAAATAAACAATGG
AAAAAACGTTAATTAGTGTCAATTAAGAAACAAATTCTTTTTATCCTCTA
TTTCATCTTGTATGTTGTTATGAGAGTTGCAATTTAGTGAAAGATTTTCG
TGGTCAGATTTGTGTTAAAAGATTTCGTTGCAAGGCTTGGTAGCTGAAAA
GTTGCTTGAAAGATTTTTTTGGGGGAGCGAATCGGTAATGTCAGGAGTCA
AAATGCAAAATGGCAGCGTACCTGTCAAAGGCAGAAAAATTGATTCCAAA
TTAAAACTGAAAGTAGGTTTAAAATTTTCATGTTATAAAAATTATTCCTT
CTAGCGATATATAGAGGACTTTTACAGGGCAGGGTTGGCCACTTAGACAA
AATTGGGTACAAGGAGGTGCCACTGGTCGTGGTCCCATTTTTTAGGCTCT
GAAGATATCTGACAGGGTCTTAAATTTACGGATCAGGTCCGGTTGAACTG
GTCGCTGGTTGGATTCTTTTCAGGATGGAAATTAGAAAATTTTGCGTTCA
CTTTTAGTCATTTGAGCCACTTTCTAGGGTGAAAATGGGAAATTTTTTCG
ATTTTTCTTTCTGACAGGGTCCCAAATTTTCCAGATATTCATATCTGACA
GGGTCCATTTTTCAAACTTTAGCGACACGTCCCCGTCGGCCGTCAAAGTC
AGTGCCCCCCGGGTTTTCATATTTCTGTGTACCGGAATGCCACTATGTAC
ACGTTTGTTTTACAAAACGTGTACGTGTTTTTCTCAGTGACTCGGTGACG
AAAATGGCCCTTCACGATTGGATAAAATTATAAGAAGAATATAACAACAT
ACAACGGATAGGGGGAGTGCTTTAAAATCCGTTAGTTTTTAATGAGTGGG
GAATTCTAGTCCACAATCCAGAAAACTCGTTTGGGATAACAAAATTTCTC
AGTATGTTTCCCCTAAGAGTAAGAGAGCTCAGCTTAATCTCTCAATGTAG
ATGTAATTTTGTGGGAAGTTATTTCTTAAAAGGGAATTTTCTATATAGCC
ATAAACAATTGTTTCCATCTAGGCTAAGGGGTCAATATGTTATATTGATG
AAGAAAAATCAGAGCCTTCTCATAAAGATATAGTATCAAAGACGATAGTT
AATCGCGTGGGAACACTAAATACGTGACATCGAATGGTTCAAATATATCG
GAAAGGATATTGAGTATTTACGAAATCAAAAAGAGATCTAAGAAGGAGTG
GTCTGGGTCGTAATGATCTCCTATTTCTGGGTTTGAAGCACTCTTCCACA
GTGTCGTTTGCTTTCATTTCGGCATTTGTTTTCCTGAAAACGGGATTTGC
GTCAACAAGTTTCATAATTGCTACATTTTTTGTACCAGGAAGAAAATTTC
GTTTTATGAAGAAACATTTTGAAAAAATTAATGATTTCTTTTTTTTTGCA
TCCGAGGGGTTTTAAAATTGAGAAATCCGTTACTTTGAAATTCAAAGGAG
AGAAACATAATATTTCATAAGGAAATTCAGTATATTTTTCTAATTAGGAT
AAAATTGCAGAACGATATTTTTCTCTGCAGATGAACCTTTGACTAACCTT
TCCAGAAAGAAGTGATGCTTGAACCCGGTCTGCAGCACATGCACGTGAAT
ATTGCAAGGTGATTATCCGACGGAGAGATGGAAGTTTAGTTCTCAGTAAA
AGTAGAATTGATCAAAACTGAAACATCAGCTTTTTTTCAGCTATTTTTCT
GTCTTCACTGAATTTTCTGATTTGAAAACAATGGAATTCAAATCCCAGCA
AGCCTATGCAATATCTATCTCCGTCAAACACCCCTGTCTCACAGCCCCGG
TGAAACTTTTTTCCTCATGGGGATAAAAACTCCTATTGAAATCCCAATGG
GGATAGAAATTCTATTGGGTTCTAAGGTTAAAAAAATTCAGTGGGGATGT
GTTTTGAGTGCAATTTTTAAACATTGAATTTCGAATGGGGGTGAAATCAA
AGTCAATTTCCCAGTGGAGCTGAAATTTCAGGGTATTTTCCCACCAAAGA
TTTTCCTGTTGGGCTGGGGTCTTAGTGGGTCTGACACAGGGGTGACATCG
AGCTTCAGTCCGTAATTTTTACCCCCATTGGTTGAAAATCCTACTGGGTC
TTTGAGGAGGGGGTGTCTGTGTAGGTTGGCTAAATCTCTTAAGATAAAAA
GGAAATGTCAAGAAATACCAAAGAAGCTTATCTCTAATCTGTTCCGTATA
AATGCCAGAAGTTAAACCGTGACATTTGAATTCAAAAAGAACTATGTAGA
TAAAATGGAGAAGAAATCCTTGAAAAGGAATTAGAATTTGATTTCTTGTA
CGTCAAATTCAGATTAAAAGAGACGTAAATGTTTTCATTATTTTTCGTAG
GGTATGCTGGTTTTTTATTGTTGACTTAAGTACTGGAATCTCACTGGACT
TTTTTAATTGCTTTTTAATTCTGATGTTATGACGTTGGGAAGCATTCTTC
CATCGTTGGTTATGGGCTCTTCTAGCAAAAATACCTAGGAGGTTAAAGAT
GTACACTTTATTTTTTTATAAGAACAATGAGGCTCAAAAATGCGAAAAAA
TAAGAACAATTTAAGAACAGTGGAGAGGCTGAAGTTAGAGAGTTATAGCA
AAAAGAATAACTGGTTTCTAAAATCCTCTAAATAGTAAAGTAAATAGCCA
AAACTTGTTTTTTACCTTAGAAAAAATAAGAACAAAATAAGAACAATTCA
AGGCTCAAAATGCCAAAAAAATAAGAAAAGCCGAGCGTCAGCAAAAATTT
ACTGGCAAAAAAAGAGGTGTATTTTCAGCGTATTGCGATGGAAAATTGTG
AAAAACTGTAGATTAAATTTGCATTGTCCAGGGGTAAATTTTAAATGCCC
ACTCACTGAAAAAATAAAATATTGAGCGGGTTTAACTTTAGTTCAGTAGA
GCCAGGTCTGTAATCAGCTTTCCTGAAATTTAACTCCTTTTGTTTTAGTG
CTTTTACGATTTTGAAGGCGAAGTTATTTTAAAGCTTGCTCGAGTTAGGG
AAACATTCGAGTTATAGAGGTCTGAGTTAAAGAGTCTCTACCGTAGTTGA
AATTGATGAAAAGTCACGTGATCCTAGTATGTAAAGAAATGTTGAAACAT
ATTTGAAAAGTCTTTTTCGATGCCATGTTTCGGAAATCAAAATAATACCT
GGCTAATTAAGCACTAATTAAAAATTTATTGTTCAGCCTACAATTTCAAA
AAGTTCGAAGGAAATTGGTATAGCTCACTATGATAAAAAAGAATTCCAAA
ATTTTATTTTTTGTTTTTCTTTTAATTTGTTTGTTGTTGTTTTCGATGGT
CATTAAATGCTTCGAGCAATAAATAAACAGTTCAGTAGTAAAGTTTTGTA
CTTTGTTGAGAGAAGATCTTGAAGGATTTTAAATCAACTTTTTCTTCTGA
CCTAAATTTCACTTGAATACCACAAAGATTGTATATCAATGTTACTACAA
ACGGTCGAGGTAAACATTATCAATTGCTTTTGAAAATTTGATTTTGACTT
AAATTTCTAGGACCATACTTGACTAACTTTCATGGGTCTCTCCAGTACGT
TTTCAATGACTTTTTAAACCTTTTGATTTTGACAACTGTAGTCTTTTTAG
GCCACACCCACTCATCAATGCAAGAATCTCTTATTCTCGGCAAACTTTGA
AAGTCTTTGTGAGGTTTTCAGGATAAACAAGTCCGAAACATACCATTTAA
CCATTTAAAATTGCTTTATAAGAGGAACTGTGAATCGCACAGTTAGTCTT
GACCACAATAAAGACTATGAAGTTTCCTTTTATCGCCAAATGGAACAAAT
ATAAAAGATAGTTATAGCATTCTCCTTGTATCAAACTAAATTTTGACTCT
GGTCAAAGGGGTTGTATTTTTTGATTGAGCAAAGTAGATAGCGTTGAGGA
CATTTTTCAAAAAAAAATATTTTGGAAGTTCTAATTCTATCGGATTTGAA
GTGTAAGTATACTCTTGTCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CAGAACTTTTTTTAACAACAACAAAAAAGAAACTTTAGCAAATGAACACG
TAAAATAAGAACCAATACTAACAAAAAAGGAAAATTTTAATACGTTTAAG
GTCTATCTACACTTTAATAAAATATTGAACTATTCGAATTTAATTGGCGG
GGGGGACGTCTATTCGGGAGACAAGAGTAGGTAAGGTAATGCTATTAGCC
ACATTTTATCATGTGATTCAATTTTGATGATTTAACTTTTGACAACAATA
GTTTTGTCATCAGCAGTTCATAGGGTTACTGTGAAAGAAGATTGTAGATT
TCTTTTTTGAAATTGCGGGGATTGTTGGCTATGTAGACGACATATCTCAC
CGCACATTGTTAATTTTATCCTGTAACATCGACAAAGATTTTTCATAATT
TATCACTGTCAGAATTGTGTAAATTATTCAAAATAATTGTTACGAATAAA
TTCTCTAATCACCGAAAAACATCAGATGTTGACAACTTTCAAACTAGTCA
ACAATCATTCCTCTAAATACGGAAACATGCAATCACGTCATACAGTAGGA
AAAAAACTTTCATAATTAAGGAGGTTATTTAGTGGCTTTTTCAGGAAGAA
ATACCGAAATTAAGCAGATAGTCATTAAAAATATACTCATTATATGCAAA
ATGTTTTACTGTATTTAGAGCATGGTGCCACATTGGCTTTTGATTATTTT
GTTCTAGAGAGGGGAGTGACTGTTGGATATGAACGGTGTTCTGCGTAATG
TGATATGATGATATCTATGTTGTCGAACGATTTGAGGGTTTTATTAAGTC
GAGGAATGAATACATAATCAAAATATTGAATTGATGAAGTGATTGAATGA
ATTTAGCCATGAAAATTTTTAATGATTGTGGTTAGAGTCTGATGCCACAC
TACGTTGTTTGAGGGTCCATCTAATGTCTACAACACCCATCTTACATCTT
TGACGTTGATTGGACGTTAAATGAACGTTGAAACAACGCCGTGTGTCAGT
TGGGAGTTTGTATAAGGCATCTTTGTTGAGTCAACATCAGTATTAGGCAT
TAAAATTTGAATAAGGTATTTTCTGTTGGAAAAAGTTTTGCTAAAAGTTA
ACTACTAACCTTTGAAAACTTCAAACTATTTTGACAAAAACTCGCCAAAA
TAAAAACTTTTGAAACTATGCAAAGTTTTTGGGTCACCTATTAGAATATC
TCATCTTTGTTTCCCAGGTACAACAAACTTCACTCGAAGAAAACAACACA
AACGTCGCCATGTTGGATCGAAATGAACGGGACCGAAAACCTCGATCGAA
CGGTCGTTACTTCAATAAGCAACGTGCACAACAATACTCTCCAACCTCCA
CCGACACTGGATTGTCCGGATCTCCACCGTATGTAAACGGAATTAACGGA
AGCCGGACTAATCTTACAAATGGCTACAAACCATCCTACTCGCCGACATC
TACTGATGCTGAATCAGTCTCACCCTTACCTTCAAATGGGTGGGATTTTT
CAGAGCTCGAAATGCGCTACACATCAATGATAAATAGCCTAAAAGACGAA
CTTTCTTTTCTTGAAGAATCAAACACCAATCTACTTACGGAGCTACGAGA
AAGTCAAAACTCGAATTACGTATTAACGGAAGAAATTCGACGTCAGCAAC
GTAACAACTTAAGTACGTTAGATGAGTTACAAGCGTGCCAAACAGCAAAT
TCAGTTCTGAGACAGGAGTTGCAACGTCTTGAGCAATCCAGCGTTAAAAT
GTCCAGAGATTCTGAAAAATACAAGAAGGCGAACTCGATGCTTAAAGATG
AGATCAAAGACCTCAAAGCTCATAACTATAAACGTAAAAACAGTATGGTT
ACACTCAAAGAGAAAGCTATTGATCTACAAAATGACATTCTAGAAAAAGA
GAAGGATTTCAAAGATTTGTCATCTCTCAAACAAACTGTCAATATAATAG
TCGAAGCGGTCGAAAACGATTCTAACATCGATAACGGCTATTTCCCAACC
GATTCGGACATTTCTAGTAACGATGGCAACGATGATAAACAATTGGGTGC
TTTCACTCCAAAACCGGTAAAAAAATCGGATACTTTCTCAAGTTCTTTGC
CTTCACCTCTAGCAAGGAAATTCTTTGCACATCAAAACGGGGGTAAATCT
CCATTACTGAGACGAAAACAGAAAGACAAATACAACACTGACCTGACTGA
ACGATCTCGCTCGAGATCCTTGAACGTGACTTCTGGGGAAAGCCGGGACG
AAAGTCCCTCTCCTCCCCATTACAACGGTCCCTCATCCGGCCCTTTACCG
GCGGCTGGGGACCGACGACGAGGGTCTCTTGATAGTTTTCATCAGAATAA
GGACTTGAAAGAGACCTCTCTTCGTAACAATACTTTGACACGACAGTTAG
GGAAATCCCTTGAACGACTTCACGATCATAAAATCAAACGATCGGAGTCG
GGGAATCGCCCACGTAGTATGACGTTTGACGATCGACATAACGATAAAAT
GACGGATGACTTTTCTTACGTCGTAAAAGGTAATGTTTAATGACTATGAC
ATGACGGAACTGACGAATCGTTTTTATAGAAAATCTACGTTTATTTGTTT
CAACAAGCTTATAGTGACTACCGCATGTTTTTCAGACGTGTAGGGCTGCA
ATACACATATTTCCTATTAGCAGATTCATGCAAAAGTCACGAAAGACGTC
GAGTAAACAAACTTTTGATTGGCGGAGGGATGCAAAGATTACCTCTTACA
TGGACAATTTGAAAAAATATGCTTGTATGTGCAATATTTCAGCCAATCAG
AGACTTTCTCGACGTTTTTCGTGACTTTTTTACACGAATCCGCTAATAGG
AAATAGGTGTATTCCCTTTATCAACCTTCGTATAAAGAAATCGATTTAAG
CTCCCCTGCTAGGCATTTTCGTACCCAGAGTCTCTTACACCACTTTTTGA
TTGTGCTGATGGATGTGATACAATCGTGAACGCTATTAGATTCATCGAAA
AAGCGAAATAAGGGACTGGGTTCGAGTCTACCTATTTTCTAAATGCAAAA
CTTTTCATGATCTTATAACTGAATGTTCTTCAATTTTTAATGCTCTTGTG
TTCTTATAAGTAAATGTTCCTTCTTTGACTTTTAACGTTATATATAACTA
ACTACAGTTGACTTTCTCTAATTCGATCTCAAAGCACAAAATATTATCTT
CGAATTAGAGAACGATTCGAATTACAGAGAGTAATTTATTTCATTCTCAA
GCCGGGGGACCAATGTTTTAGTTTTAGTTTCGAAAAAACTTAAATAATAG
GAGTTCGAACTAGAGAGAATTGACTGAAGAAAAATGGTCTACCTTTTCGA
TGTTTTATCTAAAAATATGTTCTGTATTTGATGTTCTTTTAGGTGAAAGT
ATTGGAACGATCAACTCTGCTTCTCCCGAGCAAGGAACCTTTGAGCTCTA
ACATTTCATCTTCCGCGTACGTCTGAAGAAACGATTTAAGTGGATGCCTA
ACTCGGATACTACTTTGAATTAATACACCCAGGACGTGTATCTTCGAGCT
CTAACATCTCTTCCATTGAGAATGTACAACCATAACAAGCCAAGATGTTG
TTTGGACGTTATATTAGCGTTCTTTTAACGAATAATGCTCAGGCGAGAAA
TAATCTAACATTTCAAATGTTCTAACATTAATTTGTAGAAGGACTTCAAA
GAGACTGACATATGAACAATAAATGAACATGTTACATCTTGGCTCCCGAA
ACAACGGATTTAATACACAACGTCCCGCAATATCAATCTAACGTCGTACA
GATCTTTTTCGATGGATATTGTTAATGTAGGATCACTAGGAAGGCACTCA
TTAACTCAAAAATTATTTGTACGCTTGTATGCGTAGCATCAATGAAGTCT
TTAGTTAGAAGACATTTTTATCTGTACGAAAATATATCTCTAAAGCGTTC
ACCATACTTGGAAATGTATCTGGAAATTATCACAACTACTGCTGTAAAAA
TACTACTACGAACCGTAAAAATGATCAAGAAGTGAAGTCTGATAGACTTT
TCAATGGCAAAACAGACCAATAAAATTTTACAACTTTTTACTACAGTTTT
GCGTGTTTTTGTCTTTAAAAATAATATCTAAATATCTTTTAAAAACCTTC
TATAAGAATACCCACGTATTTTTACTTGGCAATATACTAAGAACATATTT
GACTTAAGAATTTTGTAAAATATTGTTATTTTCTACAAAACTTTGAAACA
TACTAGAAAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030795XLOC_030795Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048411-exon-scaffold_142-1575043694:884583..884930TCONS_00048411-exon-scaffold_142-1575043694:884583..884930Clytia hemisphaericaexon
TCONS_00048411-exon-scaffold_142-1575043694:872452..873763TCONS_00048411-exon-scaffold_142-1575043694:872452..873763Clytia hemisphaericaexon
TCONS_00048411-exon-scaffold_142-1575043694:870718..871588TCONS_00048411-exon-scaffold_142-1575043694:870718..871588Clytia hemisphaericaexon
TCONS_00048411-exon-scaffold_142-1510915933:884583..884930TCONS_00048411-exon-scaffold_142-1510915933:884583..884930Clytia hemisphaericaexon
TCONS_00048411-exon-scaffold_142-1510915933:872452..873763TCONS_00048411-exon-scaffold_142-1510915933:872452..873763Clytia hemisphaericaexon
TCONS_00048411-exon-scaffold_142-1510915933:870718..871588TCONS_00048411-exon-scaffold_142-1510915933:870718..871588Clytia hemisphaericaexon
TCONS_00048411-exon-scaffold_142-1491911889:884583..884930TCONS_00048411-exon-scaffold_142-1491911889:884583..884930Clytia hemisphaericaexon
TCONS_00048411-exon-scaffold_142-1491911889:872452..873763TCONS_00048411-exon-scaffold_142-1491911889:872452..873763Clytia hemisphaericaexon
TCONS_00048411-exon-scaffold_142-1491911889:870718..871588TCONS_00048411-exon-scaffold_142-1491911889:870718..871588Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:870718..884930 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	5.72103e-09	0.274216	0	0	0	1.43778	1.69984	5.83513	3.83693	0.00273528	0.713376	0	0	0	0	0	0	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048411 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top