TCONS_00048414 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048414
Unique NameTCONS_00048414
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2177

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048414 ID=TCONS_00048414|Name=TCONS_00048414|organism=Clytia hemisphaerica|type=transcript|length=2177bp
cgctaagggtcgtaaaattcccaaaattttcctttgttttctccttttta
gtcccggtaagggtccaaagttcaaAAGTCAGGCGGCAcgccccccgtca
gctcgcaaccatagtacCCCTCGGGCTTTTTTACGGGTTAAAACATCTCT
AATGGATGTGAAGGAGTAAGGAGTCATTTTTTTAGTCTTCACTTTTGTAC
AATTTAAGTCATCatgaataaaatacaaaagtacgcaaaaaagtttaaaa
aacaagttgttttgaagaaaaacattcaTTTCTAGTCTCGTCATGTCATC
ATCATGAAAAGGTCAATCGCTTCAACAGACATCATCCATCAACACTTACc
cttctctttcttttttacaAAGTCGACATTTTACAGCTGCCATTATTCTC
ACGAAACACACATTTATGCATACATACAAAATACTGTAGAAATGACATGA
TCGAAAGTAGATCAAATCTTTTGACTAAAAGTTTGCACGTAAATTACTTG
AAAAAACCAAATCAAGAAAGGGTTTGAGATCAATGGAACAATTTTTATGT
ACAGATCAAAGCTGAAAAAAGAATGAAGCATGATATCAGAAGATTCTTAA
TTTTGTTCCAGTGCATATGTCTGTACAGAACAACAAACACTTTCTCATGC
GAATCCGCGCAATGCAGAGAAGCTTTAAACAAAGCTACGAAAGCCTCCGG
AGCTAGTATGTGGCGGACGGACCCTATCGGAAGCTTGAGGTTGTATTCTA
ATCTTTTTGATCTGTCCAAACTAAAGAACAATCAAATTCGGATCAAGAAA
TTACCGAAGTGcaagaaacatatcaaaacgaaatattttacaaccttcaa
aaaatatatTAATTTCGTAGAATCTCAATCGAAGATCCGTGGTGTCAAGA
AATCCGTCATTTCGGACAATGGTTTCCATCACAACGTCACTTTCTCGCCT
CCTTATAAGCTGTCTGCAAAATATCTTAACACCATGCAATACTTCTTGGA
CGGGGGTTCAATTGCAACTTCATTTGGTGAATGTTTAGTTTACGATATTC
AACTAAACACAACAGGCAAACAACTTCcaaaattttcagccaaatttatc
GAAATGATTAAAGATCTTTATAAAGCAGCTTACATGAATCAAAAACATCA
GAAAAGAATTTTCGAGAAATTCCGCTATTATTTTGGTGATTATTATTTCG
GACGCGTCCAAATCGGGATGCAATTTTCATACACCAAATCTCTCCCTGGG
AACTCCAGAACACGAATCAAAAGGCGGGAAATCAAGAGCTGCAATCACCG
GAAGCTTGCCAAGAGTATCAAAACTAGAGTCACCAAGAAATACCAGAAAG
TCAAATGTACATGGAAAGGGAAGAGTAGCAATGGGGAAAGTACCTACCGC
GTCAACGGAGGTTCTTttaaagaaatgaagaaaatgcGGAATGACGAGAT
AACCGGAAATCCGGTCCGGTATACCTTAATTCCAATTACAGAACTCTTGA
CTGATAAATTATTCAAAAGAAATAATATTAAGGTTGATGGTGAAATCATT
CGTAGCGCTGCAATCAACCAGTGGCTGACGCCGGTTTATCATGATAAACT
TAAAGACTATACGGTGAAGAATGAATGTCCTGTCGGTTACAAACTGTATG
GGAACTGGGAACGACATAATTGCCAAGACTGGGGCGAGTGGAAATGCAAT
GCGAAAtgtgggaaaggattttggaagAGTCGACAACGATCGTGTTATGG
ATGTCTTGGAAGGACCTGGGAACGAAGGAAGGAAGAATGTTATGCAGGAC
CGCCTTGTAAAGGGAACGAAATGCGAGGATCATTGCAGACATATTTCATG
ATGGATGGCTTATGATTGGAATTAGGAGATTGAGCTTCCAAAAATATTGA
TTCTGCTGATGAAAAATGAtgacatttttctttaatttattgACGTTATG
TAAAAGGTAGAATTTTTTAAGAAGTTTCCAATGGTTATTTTGATGATGTT
TCGTGGTCTCGTCACCCAGAGATACAACCAAAATCAGAACTGAAAAACTT
GTAATTAAAAGAACGGTAAAGTTGGCTAGCTGATCAACAATTTTTAAATG
GTAAATGTATATTTGAAATTCTTACGAAGCATACCAAATAGTTAAATACA
TACAAAgctagaaaaatagaaaaataa
Run BLAST on NCBI

protein sequence of TCONS_00048414-protein

>TCONS_00048414-protein ID=TCONS_00048414-protein|Name=TCONS_00048414-protein|organism=Clytia hemisphaerica|type=polypeptide|length=430bp
MKHDIRRFLILFQCICLYRTTNTFSCESAQCREALNKATKASGASMWRTD
PIGSLRLYSNLFDLSKLKNNQIRIKKLPKCKKHIKTKYFTTFKKYINFVE
SQSKIRGVKKSVISDNGFHHNVTFSPPYKLSAKYLNTMQYFLDGGSIATS
FGECLVYDIQLNTTGKQLPKFSAKFIEMIKDLYKAAYMNQKHQKRIFEKF
RYYFGDYYFGRVQIGMQFSYTKSLPGNSRTRIKRREIKSCNHRKLAKSIK
TRVTKKYQKVKCTWKGKSSNGESTYRVNGGSFKEMKKMRNDEITGNPVRY
TLIPITELLTDKLFKRNNIKVDGEIIRSAAINQWLTPVYHDKLKDYTVKN
ECPVGYKLYGNWERHNCQDWGEWKCNAKCGKGFWKSRQRSCYGCLGRTWE
RRKEECYAGPPCKGNEMRGSLQTYFMMDGL
Run BLAST on NCBI

transcript from alignment at scaffold_142:895768..900874-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048414 ID=TCONS_00048414|Name=TCONS_00048414|organism=Clytia hemisphaerica|type=transcript|length=5107bp|location=Sequence derived from alignment at scaffold_142:895768..900874- (Clytia hemisphaerica)
CGCTAAGGGTCGTAAAATTCCCAAAATTTTCCTTTGTTTTCTCCTTTTTA
GTCCCGGTAAGGGTCCAAAGTTCAAAAGTCAGGCGGCACGCCCCCCGTCA
GCTCGCAACCATAGTACCCCTCGGGCTTTTTTACGGGTTAAAACATCTCT
AATGGATGTGAAGGAGTAAGGAGTCATTTTTTTAGTCTTCACTTTTGTAC
AATTTAAGTCATCATGAATAAAATACAAAAGTACGCAAAAAAGTTTAAAA
AACAAGTTGTTTTGAAGAAAAACATTCATTTCTAGTCTCGTCATGTCATC
ATCATGAAAAGGTCAATCGCTTCAACAGACATCATCCATCAACACTTACC
CTTCTCTTTCTTTTTTACAAAGTCGACATTTTACAGCTGCCATTATTCTC
ACGAAACACACATTTATGCATACATACAAAATACTGTAGAAATGACATGA
TCGAAAGTAGATCAAATCTTTTGACTAAAAGTTTGCACGTAAATTACTTG
AAAAAACCAAATCAAGAAAGGGTTTGAGATCAATGGAACAATTTTTATGT
ACAGGTAAGTACCGCTTGATTTTTGTTACCATGTATTGTCTTTTCTTCGT
CGTTCTTTGTAAGAAAAATTTGGTAAACATCTCCTATTACCCAATGATGT
ATTAAAAGCACTCAGCAATCATAGTGCAGTGATAGAGCGTCTGGCTACGG
TATGCAAGAGGTGGTGGGTTCAATCATCGGCCGGGTTTCACTTCGTAGTT
AGTACAAAAAAAGGTATTTGATGATTCAACTTTATGAAATTATGAGTAAA
TGAAGGGTAAGTGAAGCAATCCACGGAGAAAGTGACGTCCTGTCCTAATT
TTGAGCAGGTAGCTATCGGAAAAGGAGCCTTCGGGTCGCCTCAGACTGCA
GTCGTAGACTTAATTACTTCCTATTATGCCAAAGAAGCTAGATATCTGAC
TTTAAGCGTTCCCCAGGCTTCACTGATATAATGATCGAAACAACTGTGAT
ATCATCAGTTTAGCTTAGCACCTCTTCTCGACTTCTCAAAACACAGCAGA
GTTGATTCATTATCCTAGTGCATATAAGGAGGATTCTGCATTGGGCTCTT
CCAGAAAAAAATCGTTCATGGGGGTGGAGAATATATTAATTTTTTCAATG
ATCTACCACTGGACATTTTGATTTTTCACCCCCTGGACACGTGTTTTACC
CCTGGACAAGCATCAAATCGACCCCCTGGACACCCAAAATTTACCCCTGG
ACATTGCAAATTCACCCCATGGACATCGTCATTTTCAGAGTTTTTTTAAT
ATCCCTGTACAATATATCTTCCACCCTCTATGAAGTTCCAACCTCTAGTT
TTTTTTCTGGATGAGCCTATTCTTATAGTTTCATCTGGGTCAACACACAA
AACCCTCTCAATATTCTTCTGAACTACTAGTTTTCATGTGGACTGTAAGG
TTTACAATACTCTTTTTCCAAACAGATCAAAGCTGAAAAAAGAATGAAGC
ATGATATCAGAAGATTCTTAATTTTGTTCCAGTGCATATGTCTGTACAGA
ACAACAAACACTTTCTCATGCGAATCCGCGCAATGCAGAGAAGCTTTAAA
CAAAGCTACGAAAGCCTCCGGAGCTAGTATGTGGCGGACGGACCCTATCG
GAAGCTTGAGGTTGTATTCTAATCTTTTTGATCTGTCCAAACTAAAGAAC
AATCAAATTCGGATCAAGAAATTACCGAAGTGCAAGAAACATATCAAAAC
GAAATATTTTACAACCTNCCAAACTAAAGAACGATCAAATTCGGATCAAG
AAATTACCGAAGTGCAAGAAACATATCAAAACGAAATATTTTACAACCTT
CAAAAAATATATGTAAGTTTTTCTAATTCACACTCAGCTCAGACGACTCA
GTTAAAAATCTCCTGGGTAAATGCGTAAATAGTGAGTCTGGGATCTTCCT
AAAAAGGACAAATTTCAATTGCATAGACTTAACATGGTTTCAAAAAAGAT
TATATTATTGATATATTAGCTTTACTTTATTTTTTTGTAATGATTGACAC
TATCTAGGCCACCAACAGTTTTTCAAGGGTGCTTTAAACTCCGCTCTATT
GACGTTTTATATCACAAAATGGGCGTTTTATTCCTGCTGTGACTAACTGA
AACCGTTTAATCTGCGAAACAACAGTTAGCTAAACTTAAGCCTCTTTATA
TGATGACTTGACAAGCAGAATATGAAGCTTTTTTTCCAGATTCTTTACAC
GTGACTAACCCAAAGCCTTTATATAGAAGGATAATATATGATGCAAAGTT
CCTCGGTCCAATCCGTCCAAAAACTCAAATGAAAACCAAGATAAATAAAT
GATTTTTCTGCTAATGACATTTTCATTCCACCTCTTACGCAATTTTCAGT
CTATATATTTCATCTATTTTTCTCTTCATAGTAATTTCGTAGAATCTCAA
TCGAAGATCCGTGGTGTCAAGAAATCCGTCATTTCGGACAATGGTTTCCA
TCACAACGTCACTTTCTCGCCTCCTTATAAGCTGTCTGCAAAATATCTTA
ACACCATGCAATACTTCTTGGACGGGGGTTCAATTGCAACTTCATTTGGT
GAATGTTTAGTTTACGATATTCAACTAAACACAACAGGCAAACAACTTCC
AAAATTTTCAGCCAAATTTATCGAAATGATTAAAGATCTTTATAAAGCAG
CTTACATGAATCAAAAACATCAGAAAAGAATTTTCGAGAAATTCCGCTAT
TATTTTGGTGATTATTATTTCGGACGCGTCCAAATCGGGATGCAATTTTC
ATACACCAAATCTCTCCCTGGGAACTCCAGAACACGAATCAAAAGGCGGG
AAATCAAGAGCTGCAATCACCGGAAGCTTGCCAAGAGTATCAAAACTAGA
GTCACCAAGAAATACCAGAAAGTCAAATGTACATGGAAAGGGAAGAGTAG
CAATGGGGAAAGTACCTACCGCGTCAACGGAGGCTCTTTTAAAGAAATGA
AGAAAATGCGGAATGACGAGATAACCGGAAATCCTGTCCGGTATACCTTN
TGGAGGTTCTTTTAAAGAAATGAAGAAAATGCGGAATGACGAGATAACCG
GAAATCCGGTCCGGTATACCTTAATTCCAATTACAGAACTCTTGACTGAT
AAATTATTCAAAAGAAATAATATTAAGGTTGATGGTGAAATCATTCGTAG
CGCTGCAATCAACCAGTGGCTGACGCCGGTTTATCATGATAAACTTAAAG
ACTATACGGTGAAGAATGAATGTCCTGTCGGTTACAAACTGTATGGGAAC
TGGGAACGACATAATTGCCAAGGTAACCAATAATAAAAAAGCAACATTTT
TCTTTTTTTGTCCCTTTTTGTACCATACTATACTTGCAACTTCCTCCCAT
GTATCCCAGGATTTATTTGCGTTACTGATGAACGCCTGATGTATTATCTG
GTGCTATAAGTAAGCATTAACCCTTTAAGTGCCACAGTCATTTTTTTCTA
AGTTTTTAAAGAAAATCGCTAGTTCAAACTTTAAAGGCTTATATCTCCAA
ATCTAGAAGGAATTAGAAACTTGTTTATAGTCAGTTGGATAGCTTAGAGT
CTCCTCTTTCTTTTAGGCGCCTTCGGCGCCGCTCGATTTAGGAAAGGCGG
AATGGGCGGCGGCTAAGGGGGAGGGAGGTAAAGGAAGCTAAAGCAGTCAG
GTCCGTGGAATGTTAGGAAGGCACCGAGTGGTAAAACTTCAAACTAATTT
GCTGGAGGACAGAATCAAGTTAATTAGGGCCAAATTTGGAGGGTTTTGGA
TCATTCGTTGACCAATTTTTGGTCAAAATCTTAAAAAAGTGGATTTTTGT
CAAATATTTGCAGTTTTTTGACTTTTTAGCTTAAAATCTCGCTGAAACGA
CTTAGTTTTGATTTTTTTTTCTTTGCCATGAAACCAAATTCGATTTCTAC
GAGTAAGACCAAAAATGACGATTTCTTATTCAAACTGGGCATTACAGGAG
GGCTTCGCCCTCCTACATAGCCCATGTCTGATATATACGACATTGGCACT
TAAAGGGTTAAGTAGTGAAGAACGGGAATTTCAGCAGCATCCAATCCATA
TTTTCATTTTTCAACTGTTGGTAAAAAGTTCGTTGTCAAAAACGCGAGAT
TTTTTCAAACCGGTACCCCGGATTCAATTTGACCACTTTTTGTTTGAACT
GACGGACGTGATACTTATCACTATCAGAATTATAAACAAGCAAACTTAGG
AGCTGAGTACTTATTGTGAAAAATTTTCATCCTCTAACTCATAAAGTGCT
CGATAAATTAATAGATAATTCGGAGATATAAGCCTTTAAAGTTTGAACTA
GCGATTTTCTTTAAAAAACTTAGATAATAATGAAGATTGGTGTGGATATC
TATAAATATAATAACTTTTAATTTCTTAGACTGGGGCGAGTGGAAATGCA
ATGCGAAATGTGGGAAAGGATTTTGGAAGAGTCGACAACGATCGTGTTAT
GGATGTCTTGGAAGGACCTGGGAACGAAGGAAGGAAGAATGTTATGCAGG
ACCGCCTTGTAAAGGTAAATGTTGCTCAAAGTAGTACTTGATCTTTGGCT
AACTTTCCGCCCACGGGTTCTTTTCATACACCCAGCTCAAAGAACTTAAA
AGGTAGTGTCAAATTTTTTTATCAAAAGTAAGCTAAGGGTTTGGATACTT
TTTATCTGGAATGATATTTTCGAACTTTTTCATTTTCTACAGGGAACGAA
ATGCGAGGATCATTGCAGACATATTTCATGATGGATGGCTTATGATTGGA
ATTAGGAGATTGAGCTTCCAAAAATATTGATTCTGCTGATGAAAAATGAT
GACATTTTTCTTTAATTTATTGACGTTATGTAAAAGGTAGAATTTTTTAA
GAAGTTTCCAATGGTTATTTTGATGATGTTTCGTGGTCTCGTCACCCAGA
GATACAACCAAAATCAGAACTGAAAAACTTGTAATTAAAAGAACGGTAAA
GTTGGCTAGCTGATCAACAATTTTTAAATGGTAAATGTATATTTGAAATT
CTTACGAAGCATACCAAATAGTTAAATACATACAAAGCTAGAAAAATAGA
AAAATAA

Coding sequence (CDS) from alignment at scaffold_142:895768..900874-

>TCONS_00048414 ID=TCONS_00048414|Name=TCONS_00048414|organism=Clytia hemisphaerica|type=CDS|length=7758bp|location=Sequence derived from alignment at scaffold_142:895768..900874- (Clytia hemisphaerica)
GGAACGAAATGCGAGGATCATTGCAGACATATTTCATGATGGATGGCTTA
TGAACTGGGGCGAGTGGAAATGCAATGCGAAATGTGGGAAAGGATTTTGG
AAGAGTCGACAACGATCGTGTTATGGATGTCTTGGAAGGACCTGGGAACG
AAGGAAGGAAGAATGTTATGCAGGACCGCCTTGTAAAGGTTCTTTTAAAG
AAATGAAGAAAATGCGGAATGACGAGATAACCGGAAATCCGGTCCGGTAT
ACCTTAATTCCAATTACAGAACTCTTGACTGATAAATTATTCAAAAGAAA
TAATATTAAGGTTGATGGTGAAATCATTCGTAGCGCTGCAATCAACCAGT
GGCTGACGCCGGTTTATCATGATAAACTTAAAGACTATACGGTGAAGAAT
GAATGTCCTGTCGGTTACAAACTGTATGGGAACTGGGAACGACATAATTG
CCAAGTAATTTCGTAGAATCTCAATCGAAGATCCGTGGTGTCAAGAAATC
CGTCATTTCGGACAATGGTTTCCATCACAACGTCACTTTCTCGCCTCCTT
ATAAGCTGTCTGCAAAATATCTTAACACCATGCAATACTTCTTGGACGGG
GGTTCAATTGCAACTTCATTTGGTGAATGTTTAGTTTACGATATTCAACT
AAACACAACAGGCAAACAACTTCCAAAATTTTCAGCCAAATTTATCGAAA
TGATTAAAGATCTTTATAAAGCAGCTTACATGAATCAAAAACATCAGAAA
AGAATTTTCGAGAAATTCCGCTATTATTTTGGTGATTATTATTTCGGACG
CGTCCAAATCGGGATGCAATTTTCATACACCAAATCTCTCCCTGGGAACT
CCAGAACACGAATCAAAAGGCGGGAAATCAAGAGCTGCAATCACCGGAAG
CTTGCCAAGAGTATCAAAACTAGAGTCACCAAGAAATACCAGAAAGTCAA
ATGTACATGGAAAGGGAAGAGTAGCAATGGGGAAAGTACCTACCGCGTCA
ACGGAGATATCAAAACGAAATATTTTACAACCTTCAAAAAATATATATGA
AGCATGATATCAGAAGATTCTTAATTTTGTTCCAGTGCATATGTCTGTAC
AGAACAACAAACACTTTCTCATGCGAATCCGCGCAATGCAGAGAAGCTTT
AAACAAAGCTACGAAAGCCTCCGGAGCTAGTATGTGGCGGACGGACCCTA
TCGGAAGCTTGAGGTTGTATTCTAATCTTTTTGATCTGTCCAAACTAAAG
AACAATCAAATTCGGATCAAGAAATTACCGAAGTGCAAGAAACGGAACGA
AATGCGAGGATCATTGCAGACATATTTCATGATGGATGGCTTATGAACTG
GGGCGAGTGGAAATGCAATGCGAAATGTGGGAAAGGATTTTGGAAGAGTC
GACAACGATCGTGTTATGGATGTCTTGGAAGGACCTGGGAACGAAGGAAG
GAAGAATGTTATGCAGGACCGCCTTGTAAAGGTTCTTTTAAAGAAATGAA
GAAAATGCGGAATGACGAGATAACCGGAAATCCGGTCCGGTATACCTTAA
TTCCAATTACAGAACTCTTGACTGATAAATTATTCAAAAGAAATAATATT
AAGGTTGATGGTGAAATCATTCGTAGCGCTGCAATCAACCAGTGGCTGAC
GCCGGTTTATCATGATAAACTTAAAGACTATACGGTGAAGAATGAATGTC
CTGTCGGTTACAAACTGTATGGGAACTGGGAACGACATAATTGCCAAGTA
ATTTCGTAGAATCTCAATCGAAGATCCGTGGTGTCAAGAAATCCGTCATT
TCGGACAATGGTTTCCATCACAACGTCACTTTCTCGCCTCCTTATAAGCT
GTCTGCAAAATATCTTAACACCATGCAATACTTCTTGGACGGGGGTTCAA
TTGCAACTTCATTTGGTGAATGTTTAGTTTACGATATTCAACTAAACACA
ACAGGCAAACAACTTCCAAAATTTTCAGCCAAATTTATCGAAATGATTAA
AGATCTTTATAAAGCAGCTTACATGAATCAAAAACATCAGAAAAGAATTT
TCGAGAAATTCCGCTATTATTTTGGTGATTATTATTTCGGACGCGTCCAA
ATCGGGATGCAATTTTCATACACCAAATCTCTCCCTGGGAACTCCAGAAC
ACGAATCAAAAGGCGGGAAATCAAGAGCTGCAATCACCGGAAGCTTGCCA
AGAGTATCAAAACTAGAGTCACCAAGAAATACCAGAAAGTCAAATGTACA
TGGAAAGGGAAGAGTAGCAATGGGGAAAGTACCTACCGCGTCAACGGAGA
TATCAAAACGAAATATTTTACAACCTTCAAAAAATATATATGAAGCATGA
TATCAGAAGATTCTTAATTTTGTTCCAGTGCATATGTCTGTACAGAACAA
CAAACACTTTCTCATGCGAATCCGCGCAATGCAGAGAAGCTTTAAACAAA
GCTACGAAAGCCTCCGGAGCTAGTATGTGGCGGACGGACCCTATCGGAAG
CTTGAGGTTGTATTCTAATCTTTTTGATCTGTCCAAACTAAAGAACAATC
AAATTCGGATCAAGAAATTACCGAAGTGCAAGAAACGGAACGAAATGCGA
GGATCATTGCAGACATATTTCATGATGGATGGCTTATGAACTGGGGCGAG
TGGAAATGCAATGCGAAATGTGGGAAAGGATTTTGGAAGAGTCGACAACG
ATCGTGTTATGGATGTCTTGGAAGGACCTGGGAACGAAGGAAGGAAGAAT
GTTATGCAGGACCGCCTTGTAAAGGTTCTTTTAAAGAAATGAAGAAAATG
CGGAATGACGAGATAACCGGAAATCCGGTCCGGTATACCTTAATTCCAAT
TACAGAACTCTTGACTGATAAATTATTCAAAAGAAATAATATTAAGGTTG
ATGGTGAAATCATTCGTAGCGCTGCAATCAACCAGTGGCTGACGCCGGTT
TATCATGATAAACTTAAAGACTATACGGTGAAGAATGAATGTCCTGTCGG
TTACAAACTGTATGGGAACTGGGAACGACATAATTGCCAAGTAATTTCGT
AGAATCTCAATCGAAGATCCGTGGTGTCAAGAAATCCGTCATTTCGGACA
ATGGTTTCCATCACAACGTCACTTTCTCGCCTCCTTATAAGCTGTCTGCA
AAATATCTTAACACCATGCAATACTTCTTGGACGGGGGTTCAATTGCAAC
TTCATTTGGTGAATGTTTAGTTTACGATATTCAACTAAACACAACAGGCA
AACAACTTCCAAAATTTTCAGCCAAATTTATCGAAATGATTAAAGATCTT
TATAAAGCAGCTTACATGAATCAAAAACATCAGAAAAGAATTTTCGAGAA
ATTCCGCTATTATTTTGGTGATTATTATTTCGGACGCGTCCAAATCGGGA
TGCAATTTTCATACACCAAATCTCTCCCTGGGAACTCCAGAACACGAATC
AAAAGGCGGGAAATCAAGAGCTGCAATCACCGGAAGCTTGCCAAGAGTAT
CAAAACTAGAGTCACCAAGAAATACCAGAAAGTCAAATGTACATGGAAAG
GGAAGAGTAGCAATGGGGAAAGTACCTACCGCGTCAACGGAGATATCAAA
ACGAAATATTTTACAACCTTCAAAAAATATATATGAAGCATGATATCAGA
AGATTCTTAATTTTGTTCCAGTGCATATGTCTGTACAGAACAACAAACAC
TTTCTCATGCGAATCCGCGCAATGCAGAGAAGCTTTAAACAAAGCTACGA
AAGCCTCCGGAGCTAGTATGTGGCGGACGGACCCTATCGGAAGCTTGAGG
TTGTATTCTAATCTTTTTGATCTGTCCAAACTAAAGAACAATCAAATTCG
GATCAAGAAATTACCGAAGTGCAAGAAACGGAACGAAATGCGAGGATCAT
TGCAGACATATTTCATGATGGATGGCTTATGAACTGGGGCGAGTGGAAAT
GCAATGCGAAATGTGGGAAAGGATTTTGGAAGAGTCGACAACGATCGTGT
TATGGATGTCTTGGAAGGACCTGGGAACGAAGGAAGGAAGAATGTTATGC
AGGACCGCCTTGTAAAGGTTCTTTTAAAGAAATGAAGAAAATGCGGAATG
ACGAGATAACCGGAAATCCGGTCCGGTATACCTTAATTCCAATTACAGAA
CTCTTGACTGATAAATTATTCAAAAGAAATAATATTAAGGTTGATGGTGA
AATCATTCGTAGCGCTGCAATCAACCAGTGGCTGACGCCGGTTTATCATG
ATAAACTTAAAGACTATACGGTGAAGAATGAATGTCCTGTCGGTTACAAA
CTGTATGGGAACTGGGAACGACATAATTGCCAAGTAATTTCGTAGAATCT
CAATCGAAGATCCGTGGTGTCAAGAAATCCGTCATTTCGGACAATGGTTT
CCATCACAACGTCACTTTCTCGCCTCCTTATAAGCTGTCTGCAAAATATC
TTAACACCATGCAATACTTCTTGGACGGGGGTTCAATTGCAACTTCATTT
GGTGAATGTTTAGTTTACGATATTCAACTAAACACAACAGGCAAACAACT
TCCAAAATTTTCAGCCAAATTTATCGAAATGATTAAAGATCTTTATAAAG
CAGCTTACATGAATCAAAAACATCAGAAAAGAATTTTCGAGAAATTCCGC
TATTATTTTGGTGATTATTATTTCGGACGCGTCCAAATCGGGATGCAATT
TTCATACACCAAATCTCTCCCTGGGAACTCCAGAACACGAATCAAAAGGC
GGGAAATCAAGAGCTGCAATCACCGGAAGCTTGCCAAGAGTATCAAAACT
AGAGTCACCAAGAAATACCAGAAAGTCAAATGTACATGGAAAGGGAAGAG
TAGCAATGGGGAAAGTACCTACCGCGTCAACGGAGATATCAAAACGAAAT
ATTTTACAACCTTCAAAAAATATATATGAAGCATGATATCAGAAGATTCT
TAATTTTGTTCCAGTGCATATGTCTGTACAGAACAACAAACACTTTCTCA
TGCGAATCCGCGCAATGCAGAGAAGCTTTAAACAAAGCTACGAAAGCCTC
CGGAGCTAGTATGTGGCGGACGGACCCTATCGGAAGCTTGAGGTTGTATT
CTAATCTTTTTGATCTGTCCAAACTAAAGAACAATCAAATTCGGATCAAG
AAATTACCGAAGTGCAAGAAACGGAACGAAATGCGAGGATCATTGCAGAC
ATATTTCATGATGGATGGCTTATGAACTGGGGCGAGTGGAAATGCAATGC
GAAATGTGGGAAAGGATTTTGGAAGAGTCGACAACGATCGTGTTATGGAT
GTCTTGGAAGGACCTGGGAACGAAGGAAGGAAGAATGTTATGCAGGACCG
CCTTGTAAAGGTTCTTTTAAAGAAATGAAGAAAATGCGGAATGACGAGAT
AACCGGAAATCCGGTCCGGTATACCTTAATTCCAATTACAGAACTCTTGA
CTGATAAATTATTCAAAAGAAATAATATTAAGGTTGATGGTGAAATCATT
CGTAGCGCTGCAATCAACCAGTGGCTGACGCCGGTTTATCATGATAAACT
TAAAGACTATACGGTGAAGAATGAATGTCCTGTCGGTTACAAACTGTATG
GGAACTGGGAACGACATAATTGCCAAGTAATTTCGTAGAATCTCAATCGA
AGATCCGTGGTGTCAAGAAATCCGTCATTTCGGACAATGGTTTCCATCAC
AACGTCACTTTCTCGCCTCCTTATAAGCTGTCTGCAAAATATCTTAACAC
CATGCAATACTTCTTGGACGGGGGTTCAATTGCAACTTCATTTGGTGAAT
GTTTAGTTTACGATATTCAACTAAACACAACAGGCAAACAACTTCCAAAA
TTTTCAGCCAAATTTATCGAAATGATTAAAGATCTTTATAAAGCAGCTTA
CATGAATCAAAAACATCAGAAAAGAATTTTCGAGAAATTCCGCTATTATT
TTGGTGATTATTATTTCGGACGCGTCCAAATCGGGATGCAATTTTCATAC
ACCAAATCTCTCCCTGGGAACTCCAGAACACGAATCAAAAGGCGGGAAAT
CAAGAGCTGCAATCACCGGAAGCTTGCCAAGAGTATCAAAACTAGAGTCA
CCAAGAAATACCAGAAAGTCAAATGTACATGGAAAGGGAAGAGTAGCAAT
GGGGAAAGTACCTACCGCGTCAACGGAGATATCAAAACGAAATATTTTAC
AACCTTCAAAAAATATATATGAAGCATGATATCAGAAGATTCTTAATTTT
GTTCCAGTGCATATGTCTGTACAGAACAACAAACACTTTCTCATGCGAAT
CCGCGCAATGCAGAGAAGCTTTAAACAAAGCTACGAAAGCCTCCGGAGCT
AGTATGTGGCGGACGGACCCTATCGGAAGCTTGAGGTTGTATTCTAATCT
TTTTGATCTGTCCAAACTAAAGAACAATCAAATTCGGATCAAGAAATTAC
CGAAGTGCAAGAAACGGAACGAAATGCGAGGATCATTGCAGACATATTTC
ATGATGGATGGCTTATGAACTGGGGCGAGTGGAAATGCAATGCGAAATGT
GGGAAAGGATTTTGGAAGAGTCGACAACGATCGTGTTATGGATGTCTTGG
AAGGACCTGGGAACGAAGGAAGGAAGAATGTTATGCAGGACCGCCTTGTA
AAGGTTCTTTTAAAGAAATGAAGAAAATGCGGAATGACGAGATAACCGGA
AATCCGGTCCGGTATACCTTAATTCCAATTACAGAACTCTTGACTGATAA
ATTATTCAAAAGAAATAATATTAAGGTTGATGGTGAAATCATTCGTAGCG
CTGCAATCAACCAGTGGCTGACGCCGGTTTATCATGATAAACTTAAAGAC
TATACGGTGAAGAATGAATGTCCTGTCGGTTACAAACTGTATGGGAACTG
GGAACGACATAATTGCCAAGTAATTTCGTAGAATCTCAATCGAAGATCCG
TGGTGTCAAGAAATCCGTCATTTCGGACAATGGTTTCCATCACAACGTCA
CTTTCTCGCCTCCTTATAAGCTGTCTGCAAAATATCTTAACACCATGCAA
TACTTCTTGGACGGGGGTTCAATTGCAACTTCATTTGGTGAATGTTTAGT
TTACGATATTCAACTAAACACAACAGGCAAACAACTTCCAAAATTTTCAG
CCAAATTTATCGAAATGATTAAAGATCTTTATAAAGCAGCTTACATGAAT
CAAAAACATCAGAAAAGAATTTTCGAGAAATTCCGCTATTATTTTGGTGA
TTATTATTTCGGACGCGTCCAAATCGGGATGCAATTTTCATACACCAAAT
CTCTCCCTGGGAACTCCAGAACACGAATCAAAAGGCGGGAAATCAAGAGC
TGCAATCACCGGAAGCTTGCCAAGAGTATCAAAACTAGAGTCACCAAGAA
ATACCAGAAAGTCAAATGTACATGGAAAGGGAAGAGTAGCAATGGGGAAA
GTACCTACCGCGTCAACGGAGATATCAAAACGAAATATTTTACAACCTTC
AAAAAATATATATGAAGCATGATATCAGAAGATTCTTAATTTTGTTCCAG
TGCATATGTCTGTACAGAACAACAAACACTTTCTCATGCGAATCCGCGCA
ATGCAGAGAAGCTTTAAACAAAGCTACGAAAGCCTCCGGAGCTAGTATGT
GGCGGACGGACCCTATCGGAAGCTTGAGGTTGTATTCTAATCTTTTTGAT
CTGTCCAAACTAAAGAACAATCAAATTCGGATCAAGAAATTACCGAAGTG
CAAGAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030796XLOC_030796Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048414-proteinTCONS_00048414-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048414-exon-scaffold_142-1575043694:900321..900874TCONS_00048414-exon-scaffold_142-1575043694:900321..900874Clytia hemisphaericaexon
TCONS_00048414-exon-scaffold_142-1575043694:899135..899399TCONS_00048414-exon-scaffold_142-1575043694:899135..899399Clytia hemisphaericaexon
TCONS_00048414-exon-scaffold_142-1575043694:899013..899052TCONS_00048414-exon-scaffold_142-1575043694:899013..899052Clytia hemisphaericaexon
TCONS_00048414-exon-scaffold_142-1575043694:897893..898443TCONS_00048414-exon-scaffold_142-1575043694:897893..898443Clytia hemisphaericaexon
TCONS_00048414-exon-scaffold_142-1575043694:897553..897819TCONS_00048414-exon-scaffold_142-1575043694:897553..897819Clytia hemisphaericaexon
TCONS_00048414-exon-scaffold_142-1575043694:896311..896445TCONS_00048414-exon-scaffold_142-1575043694:896311..896445Clytia hemisphaericaexon
TCONS_00048414-exon-scaffold_142-1575043694:895768..896132TCONS_00048414-exon-scaffold_142-1575043694:895768..896132Clytia hemisphaericaexon
TCONS_00048414-exon-scaffold_142-1510915933:900321..900874TCONS_00048414-exon-scaffold_142-1510915933:900321..900874Clytia hemisphaericaexon
TCONS_00048414-exon-scaffold_142-1510915933:899135..899399TCONS_00048414-exon-scaffold_142-1510915933:899135..899399Clytia hemisphaericaexon
TCONS_00048414-exon-scaffold_142-1510915933:899013..899052TCONS_00048414-exon-scaffold_142-1510915933:899013..899052Clytia hemisphaericaexon
TCONS_00048414-exon-scaffold_142-1510915933:897893..898443TCONS_00048414-exon-scaffold_142-1510915933:897893..898443Clytia hemisphaericaexon
TCONS_00048414-exon-scaffold_142-1510915933:897553..897819TCONS_00048414-exon-scaffold_142-1510915933:897553..897819Clytia hemisphaericaexon
TCONS_00048414-exon-scaffold_142-1510915933:896311..896445TCONS_00048414-exon-scaffold_142-1510915933:896311..896445Clytia hemisphaericaexon
TCONS_00048414-exon-scaffold_142-1510915933:895768..896132TCONS_00048414-exon-scaffold_142-1510915933:895768..896132Clytia hemisphaericaexon
TCONS_00048414-exon-scaffold_142-1491911889:900321..900874TCONS_00048414-exon-scaffold_142-1491911889:900321..900874Clytia hemisphaericaexon
TCONS_00048414-exon-scaffold_142-1491911889:899135..899399TCONS_00048414-exon-scaffold_142-1491911889:899135..899399Clytia hemisphaericaexon
TCONS_00048414-exon-scaffold_142-1491911889:899013..899052TCONS_00048414-exon-scaffold_142-1491911889:899013..899052Clytia hemisphaericaexon
TCONS_00048414-exon-scaffold_142-1491911889:897893..898443TCONS_00048414-exon-scaffold_142-1491911889:897893..898443Clytia hemisphaericaexon
TCONS_00048414-exon-scaffold_142-1491911889:897553..897819TCONS_00048414-exon-scaffold_142-1491911889:897553..897819Clytia hemisphaericaexon
TCONS_00048414-exon-scaffold_142-1491911889:896311..896445TCONS_00048414-exon-scaffold_142-1491911889:896311..896445Clytia hemisphaericaexon
TCONS_00048414-exon-scaffold_142-1491911889:895768..896132TCONS_00048414-exon-scaffold_142-1491911889:895768..896132Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:895768..900874 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.866932	1.15986	0.537452	0.613038	0.203902	0.237924	0.284407	0.232547	0.141707	0.314809	0.221878	0.181817	0.231219	0.153682	0.555876	0.620117	18.4988	15.7921	0.144068	0.0218469	7.68397	8.0804	6.07254	5.89858	9.40046	14.2244	9.82613	4.73317	6.54692	6.01426
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048414 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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