TCONS_00048482 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048482
Unique NameTCONS_00048482
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length191

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048482 ID=TCONS_00048482|Name=TCONS_00048482|organism=Clytia hemisphaerica|type=transcript|length=191bp
TGATATATCGATAGCGATTGGGTGGTTTCTAATTGGACTTCTTGTAGCTG
CAGTGCTAATATGCAgaattttgtaatattttttgagTAGTAGAAggtat
atatttgaataaaattgataaaaatctaattcttttcaaagcattttttc
TCGATTATTTTGAATCGATTATTTGTCTTGGAAAacagaaa
Run BLAST on NCBI

transcript from alignment at scaffold_142:837254..837444

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048482 ID=TCONS_00048482|Name=TCONS_00048482|organism=Clytia hemisphaerica|type=transcript|length=191bp|location=Sequence derived from alignment at scaffold_142:837254..837444 (Clytia hemisphaerica)
tttctgtTTTCCAAGACAAATAATCGATTCAAAATAATCGAgaaaaaatg
ctttgaaaagaattagatttttatcaattttattcaaatatataccTTCT
ACTActcaaaaaatattacaaaattcTGCATATTAGCACTGCAGCTACAA
GAAGTCCAATTAGAAACCACCCAATCGCTATCGATATATCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030836XLOC_030836Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048482-exon-scaffold_142-1491911889:837254..837444TCONS_00048482-exon-scaffold_142-1491911889:837254..837444Clytia hemisphaericaexon
TCONS_00048482-exon-scaffold_142-1510915933:837254..837444TCONS_00048482-exon-scaffold_142-1510915933:837254..837444Clytia hemisphaericaexon
TCONS_00048482-exon-scaffold_142-1575043694:837254..837444TCONS_00048482-exon-scaffold_142-1575043694:837254..837444Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:837254..837444 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048482 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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