TCONS_00048516 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00048516
Unique Name	TCONS_00048516
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3890

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_143:433939..441326+

transcript sequence

>TCONS_00048516 ID=TCONS_00048516|Name=TCONS_00048516|organism=Clytia hemisphaerica|type=transcript|length=3890bp
GGGTGTTAAGAGAACATATTTAAGAGCTTATTCATATCAAAACGAAACAC
AATTCTTTCTTAACTGTTTATAATAGCATCAAAAAGTAATGGTATTCATA
AACTCCTTATTTCCCTCAGAAACAGTAACTagaaaaaagagattttataa
aaacataattaaattCAAGCCTTCCTgtatttgaaaaagttgatcAGCAA
AGATGACGGAGAATGTATATTTATTTGTCCCCAATATCATTGGTTACGCC
AGAATCATTTTGATGTTTGTGTCATTCTATTACATGGCAACTGATGTGTG
GATTGCAACAATAACGTATCTTTTGAGTCAATTTCTTGATGCTTTTGATG
GACATGCTGCAAGAGCTTTGAATCAATGTACGAAGTTTGGGGCTGTTTTA
GACATGGTTACTGACAGATGCTCAACCATGGGCTTGCTGATTGTGTTGGC
ATCATTTTATCCAAAATAtcagtttttcttcatttttgtcaCTGTGCTTG
ATATTGCAAGCCATTGGGTCCAAGTGTACAGCAACTTATCACTCGGTCAA
TCACATAAGACAGTCAAAGAAAGTGGAAACTGGTTTCTTCGACTTTATTA
TACTTCAAGACCGGTGCTATTCACAATGTGTGCTGGTAACGAACTCTTCT
TTGCCATGCTATACGTCATGTATTTCACCACTGGCCCTATAGtATTTGGA
GCATACGGTGTTGTGCACGTGATAGCCATGGGTTGTTTCCCAATCTGTTT
CACTAAGAATGCCATCAATATCATTCAGCTAGTTGGTGGATTTGATTCTC
TTGCTGAACTCGATGTCGAAGCAAGACAGAAGGCAGAGTAAAAGGATGAA
ACTGTTTTGACTTTTCAgcattcaaattttgaatatagCTCACGTTCTGG
CTTACATTACTGGCTTTTGACACCGTTACGTCATAATAAGGTATATGACT
TTCTATGCTTGGGTTGTGGTTCATAAACTCATGGAGAAATTATACCTGGG
AAAGGAAAATTGAAGCAACTCAGTATTTCTAGTGTAGTTGCCAGATATTt
ggttttcagattttttttagtatttaaTTTTAGATGATTTGAGCCGTCAC
GACAAAGTTTTTCTATGAGCTGTCTTAATTATATTATTAATTCTAGTTGA
CGGGATgataaaaatcaattattttggAACATACGTAACTTTGTCTTGGC
GTCTGACCGATTATGAATTTAGTTgcaattttgaatttcaaagattAATG
AATTTACCTATATACGagattttattatttatcaCATATCACATACCACA
CTGCCTaagatattttattttgttattcgTAATTGTAGTTCAGTGTTGTA
ATTTATTCTCTTTTATGAACATTTATGAAACCTAAGACATTCTTTTGTAA
AGCCTTTTTAGTAGCTTTTTTCAGAGATGTTTCCAaccaaaaaagctttt
tgtaAGAAGGGCCTCTTTATCTGTTTGTGATAAGATGATCCTTTAGTTTC
TCCAAGCTGCANggcaactctggacaatgtaggcccgtcgtcatgcgaaa
agaaccaattgcattgcgcaaaaagccatgtagcccgcttcgaaaaagta
accggttaacaatctTTTGTAAAGCCTTTTTAGTAGCTTTTTTTAGAGAT
GTTTCCAaccaaaaaagctttttgtaAGAAGGGCCTCTTTATCTGTTTGT
GATAAGATGATCCTTTAGTTTCTCCAAGCTGCATAAGATCCGGTCCATAT
AGCATTATGATTGAACCGTAGCCTTCGAATGTTTTATAATACTTATCACA
ATATTGTTTTGTTGCTTAAAGGACATTTTTAACGTATCTCCTACCtaaaa
gaaagaacaactttCCCCAAGTCGTGCGCTGAATAAccacaaaatttgaa
gaagagcTTTTGTTATTTCTGCTTTGCCAGCATAAGAGGCTCACCTCCGT
TATATATACACGTttgttataagaataaactatataagaacacaaaggCT
TCGAcggaaaaatgttaagaacaagttaataacatttcaaggctttgcag
actagaaaacacccaatttctttggaaaatggacataaatactcaaaaat
ggtgaaaataagaacatgttaagaacatttttaggctttaaactcaaaaa
gttaagaacattcgaaggcttcaaagattttggatgttcctaTAACATAA
ACGTATATTCTAAAAAGGAACATCTTTGAACAATTATTTGCATAAGAGGT
CAAAACAGAAATTTCAGTGTCCAGGGGACCTTAGAGGGTAGTTTTctgag
aaaattattattaatttagTCTAGATTAGAAATGTATGATATTATCAATT
TGATCAGGAAAAGAGACTCTTCGGAttaatattaaactaaaattgaaaTG
ATTACTAAGTTAAATTATTCACGTGTTCCAagtagtttttctttttacct
tAAAGAATATTGGCTTCATTAAAAACTATTTCTGACGTTTAGTTTGTATT
TGCATTAATTATAAAGCTCAAACAAGTAAACTGTATTTCGATCACGTTTT
CGAGATATCTTCGATATATGTAGAAGTATCACCAAAATGTATTGCACGAT
TTACACTATGTATTGTATTAATTTAcactatgaaaatatttttttacaaa
ttttaggtAATGTAAAAATCATAAACCTGTGACTGAAAACATAGATTGGT
TCAATGTGGGTACATGTCTCGAAGTGGGTGCTTCGCTAACACCACTACTC
TTCACTTTTGGACGTAGACAAGGAAACTTCTTTACAAATACTCTACGAAG
TTCTCGGTTAAAACGAATCAAAATAAAAGCGTCCAGTACAGGGTTCAAAC
AAGCGAACGCCATTGCACCATCAAAATAAAGTCTGTCGACAGGTGTTCTT
ATTATGAATTCGATGACTTTGATCGTCAATGCAGGCGTCCATAGAAGAAT
ATACGTTATGACACACCCAAAACACATGTAGAACGCAAATAAGTTTTTCT
TGTGTGTTTGGTTATACGATAAACGATCTGATTGGTTATTGTTATTATCT
TGCGCATGCGTATTCAGTACAGTTCTGGTTGTCCGATGAATGGcgcgttt
ttgtttttgaagcgTCCTAAAGATTACCACATTTGGTAATAACAAAAAGA
CCATAAAGAAACCAATCCCGATAATAAACGATAACATTGCGACCGGATCG
TTTACGACAGCTCCCGCATTTCCCTTCGATAGCTGTGATAACCGAAATGA
CACTATGGTAATGTACACAATCGGACTTAGTCCCATGAACGTGACATGAA
CCCAAAGTTTTAAAGTTTGGTAACGAAATGGCCAACTAATTAATATACAA
CGATCAATGGTCAACATCACTAAAGATATATTTGCGTATGTGTAACCAGC
AAATGAAAAAGTTCCCCACGGAAGGTTTGTCCATGGACCAACGGCGTTAC
TAAGCCCCGTAAGAACGTGACCCACGCTCAAGTTTATCAACAACTGATGA
GATCTACGGGCTCGAAGTATTTCGGACATTACGATAAAGATGATAATTGG
TAAGTGACAAGCTAAGACAAGGAAGCCTGTTAGACTAGTAATGTAATCCA
CCATGATATAGACGAGAAGCTTCGCTTACTTTTTTCATCATTATGATCCG
AATGCTCATCGTTCGACGTTTATGTGTATATGTTGTTGTgtttaaatatg
attatttcattcaaaaatattttgattatatTTGTTATCCTGTTAAAAAA
AGCAAAGTAAAAACATTGTTTAGGTTCATATAAAAGAAATCTTTCAATAG
GGAAATtgaaattaaagtctgtccaaatataattggcagtggaaacaaga
atgcctgtaacttttgatagtcaaatataattatggaaat

Run BLAST on NCBI

transcript from alignment at scaffold_143:433939..441326+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00048516 ID=TCONS_00048516|Name=TCONS_00048516|organism=Clytia hemisphaerica|type=transcript|length=7388bp|location=Sequence derived from alignment at scaffold_143:433939..441326+ (Clytia hemisphaerica)
GGGTGTTAAGAGAACATATTTAAGAGCTTATTCATATCAAAACGAAACAC
AATTCTTTCTTAACTGTTTATAATAGCATCAAAAAGTAATGGTATTCATA
AACTCCTTATTTCCCTCAGAAACAGTAACTagaaaaaagagattttataa
aaacataattaaattCAAGCCTTCCTgtatttgaaaaagttgatcAGCAA
AGATGACGGAGAATGTATATTTATTTGTCCCCAATATCATTGGTAAGTTT
TTTTAGAATATGTACACAAAATTATAAGTGGTGTTTATCTGATATGGTGG
ATCAGCAGCCCCCAGGCAAACCCTTCAAAGGAGCAGACGATGCTAATCAA
AAATTaacccctgttttgtgacattttttatGTCATCCACTATTTTGCTC
ATAGAATGAGACCATCATGTGGCTTACATGTCAAAATACATCCATGGTTA
AGCTGAATAATTTATCTACCTGttgcaaaaagaacgaaattTTGTGGCTT
ACTCAACTTAANCATGAAGTGTGAGTAAAATATGTGGCTGACAAAAAAGC
CACAAAAAAGTACATTTAACAACGCAaaagtatgtacatttaacactttt
tggaaaattcagcTTTTCTTCTTTCAAGTCTAGAAGGTCTCATTCAGAGA
TCACTTTTCAATATCGTGTGGCTTACACTTTAAAATAAACTAGAATTTTT
GAACTGCAGCCACAATTTTGACtcaaataacaaatttttttttttaatca
tatctCCACGTTGAGGTCTATTACCCTGTGAAATCTCTATGGCTGATTCA
AAACATATGAAGAGTTAttccaaaaagttgattttgagcattttttacaa
tgtcacactatttttgattagCATCAGACCAATTTCCTAGGTTAGGGATG
GTATTTCGTTCTTCATGTGCTGCAATACCTTTTCTGTAAACACTCCTATG
CATTATCTTTTACTCGCCTCTATTGAGAATGAAATCTTCAAATGTTGTAT
ACTGGAGTGAAGAAAAATGACATCTAATCTGAACACTGCTTTAAAGAAAA
CTTCTCTATTTGCATGGTTGTTAGGTCTCTTTCAGTTTGTGTGGAAATTA
GTAGAGGggtaaaaattatcaaagttTGCATGGATTCCTTTAATGGATGG
TTAGTTAAACATAACCAAGACCTAGAAATAATAAGCTGAAAAAACTCCAC
CTTATCTTATTTCCATAGGTTACGCCAGAATCATTTTGATGTTTGTGTCA
TTCTATTACATGGCAACTGATGTGTGGATTGCAACAATAACGTATCTTTT
GAGTCAATTTCTTGATGCTTTTGATGGACATGCTGCAAGAGCTTTGAATC
AATGTATATGTCAAACTTTCTCCCCTTTTAAAGATGACTTGATAAATTgt
acaaaataccaaaattaatgttttttaaGCCTCactgttttaatttttga
tcCAAATGATTTCTTTATTTCCAAATCGGAATGCACTATTCCAAAATttt
aatcaactttttttttatcaacAGGTACGAAGTTTGGGGCTGTTTTAGAC
ATGGTTACTGACAGGTATCCTTCCATGTTGCTAAATGAGCTTGTTTCTCT
TTGAAGCTTGGTCGAATATGTAACCTTTTAAAGATAAAACTTAGATGAAT
AATTTCTATTAATTTTATTCTTAcattaaattgaaaaatgtatCAAGACC
TACTAAATGAGACGAATGAAGTGCATTTTTTATATTCCCTTTATATGTAT
TTTTAGATGCTCAACCATGGGCTTGCTGATTGTGTTGGCATCATTTTATC
CAAAATAtcagtttttcttcatttttgtcaCTGTGCTTGATATTGCAAGC
CATTGGGTCCAAGTGTACAGGTAAAAGAGTAAAAAGCATATTTTCTTTGA
TAAGATCTATTGTAATAggttactaaagtctgtccagatataattggcag
tggaaacaagaatgcctgtaacttttaatggtcaaatataattatggaaa
ttttttttacttgttttagagtatcaaaagcgctatatttgaaaacGGGG
GTCATGTTAtctttttgaacagtgcaattaaaagttggaaaatgttaagt
gttggtgctttggtattattggtaccattgattatttcgaaacgaagtga
aatcacagtataattgtttttgttgaaaagataagcatgaacttatattg
cctttgttatttttaagtcgttaaagaactttgctaattcccaaaacact
aaacacagtttggctatgaggtcattaaagagatcgtaaaatgtgtaatg
atcgaaaaactgttttatcaatcatatcactacccccgtttttagtaata
agttggagatttgatatatcacagaaaagtgctaccaaggggtatttcgg
gtcccatatcttccgaagtacttttttctgtttgccttgaaatttaacaa
ccttcttaacctaaggtgaacttccactggtgtaaaaatgaacgttatag
cataagtagaaaaaaagctcaatttttgcaatcgcaaattttaccgctaa
aaatcgcgaatttttcaaccaagaATGCATTCAAATATCATGANaagcgc
taaaaatcgcgaatttttcaaccaaaaatacattcaaatatagcgctttt
gattctctaaaacaagcaaaaaaaatttccataattatatttcactatca
aaagttacaggcattcttgtttccactgccaattatatctggacagactt
aaGTCGTTTACATTAGTGTCATCACAGTTCTAACAACaatctttttaaaa
gaattatcttgaggaagaaattttcgcagaaaaaaatttttaggaatttt
ttgtttataaaaggGCCTTAGATattgccctaaaaagaccaattttatag
gtgattttttaaatcctgagaataatttgtgtttcgcggaatttaatttc
gcagatttgtcaaaaaacaacaaaattaaattctgcggAAATTgctccgc
aaaaatttcttccctagACCAGTCTTGATGACATTACATTAAATGAATAT
ACCCTGTGGtatattgaaaaacttttatttcGAGCTTTAAGTTGATATTA
TTTTAAATTAACTGTTctagctttttttctttttacttacCGTTTTTTAG
CAACTTATCACTCGGTCAATCACATAAGACAGTCAAAGAAAGTGGAAACT
GGTTTCTTCGACTTTATTATACTTCAAGAGTAAGTTAAATTCGACTTCGA
TAGCTCAATACCTTTAGCTAGGTTATTTAAAGTAAAAGTGAGTGCTggta
atttaaagttttttttcaacatctcttGATTGTGATATAAAAGGCTACCA
CACTTAACAGCCAATGTCAAACTCATCACTGCACTTTTCCTGTAAATAAC
TTGTGTTTTTCGGGTTTTTTTCGTTCAGCCGGTGCTATTCACAATGTGTG
CTGGTAACGAACTCTTCTTTGCCATGCTATACGTCATGTATTTCACCACT
GGCCCTATAGGTATGTGACGTTTTATTGTTTGTCTCTTTTCTGACGACTA
CCACAACCTCTTGTAATGccgacataccttgtctaatttGTCATAGCAAA
TATGTGGTCTTTTAATGTTTATAGATAAAACCTTCTGAGTAAGCTGTTTA
AAAATTACTCTAActactttgcagaccagatagtTACTATGACGGAATTG
GACAAGGTATGTCAGCACTACAAAAGGTTACGGTAGGTTTTCTAAGAGAA
TTGGAAGGGTTTGCATGACTGAGGCACTACCTTTCTTTCATACAACATAC
CATTTTTCAACTGTTAAatgaaatgttggaccggtTTGTGCCAacgtaaa
attaaaaaaaaaagaaaaattcaaaaaagaagaaaatcacgTGTTGGATG
TATTTTTTTTTGCCATTAAACTTTTGAGCCAACATTTACGGCAAGATCAA
AGACTCTTAACGTTCGAAAGACTTTTACAATAAATGAATTAATCACATGC
ATGccttttttgtaagaaactcCAAAACTTTCGAGGCATCTTGATCCTAC
AagtgtttttgatttttgtgcaacttcctaagaaattgggtgttttatgT
TATTATGGCCATTATTAAAGCCTCATACTCTTAtataatttattcttata
aaaaactattAGCCTCGATCccaatttccttttttttcagtATTTGGAGC
ATACGGTGTTGTGCACGTGATAGCCATGGGTTGTTTCCCAATCTGTTTCA
CTAAGAATGCCATCAATATCATTCAGCTAGTTGGTGGATTTGATTCTCTT
GCTGAACTCGATGTCGAAGCAAGACAGAAGGCAGAGTAAAAGGATGAAAC
TGTTTTGACTTTTCAgcattcaaattttgaatatagCTCACGTTCTGGCT
TACATTACTGGCTTTTGACACCGTTACGTCATAATAAGGTATATGACTTT
CTATGCTTGGGTTGTGGTTCATAAACTCATGGAGAAATTATACCTGGGAA
AGGAAAATTGAAGCAACTCAGTATTTCTAGTGTAGTTGCCAGATATTtgg
ttttcagattttttttagtatttaaTTTTAGATGATTTGAGCCGTCACGA
CAAAGTTTTTCTATGAGCTGTCTTAATTATATTATTAATTCTAGTTGACG
GGATgataaaaatcaattattttggAACATACGTAACTTTGTCTTGGCGT
CTGACCGATTATGAATTTAGTTgcaattttgaatttcaaagattAATGAA
TTTACCTATATACGagattttattatttatcaCATATCACATACCACACT
GCCTaagatattttattttgttattcgTAATTGTAGTTCAGTGTTGTAAT
TTATTCTCTTTTATGAACATTTATGAAACCTAAGACATTCTTTTGTAAAG
CCTTTTTAGTAGCTTTTTTCAGAGATGTTTCCAaccaaaaaagctttttg
taAGAAGGGCCTCTTTATCTGTTTGTGATAAGATGATCCTTTAGTTTCTC
CAAGCTGCANggcaactctggacaatgtaggcccgtcgtcatgcgaaaag
aaccaattgcattgcgcaaaaagccatgtagcccgcttcgaaaaagtaac
cggttaacaatctTTTGTAAAGCCTTTTTAGTAGCTTTTTTTAGAGATGT
TTCCAaccaaaaaagctttttgtaAGAAGGGCCTCTTTATCTGTTTGTGA
TAAGATGATCCTTTAGTTTCTCCAAGCTGCATAAGATCCGGTCCATATAG
CATTATGATTGAACCGTAGCCTTCGAATGTTTTATAATACTTATCACAAT
ATTGTTTTGTTGCTTAAAGGACATTTTTAACGTATCTCCTACCtaaaaga
aagaacaactttCCCCAAGTCGTGCGCTGAATAAccacaaaatttgaaga
agagcTTTTGTTATTTCTGCTTTGCCAGCATAAGAGGCTCACCTCCGTTA
TATATACACGTttgttataagaataaactatataagaacacaaaggCTTC
GAcggaaaaatgttaagaacaagttaataacatttcaaggctttgcagac
tagaaaacacccaatttctttggaaaatggacataaatactcaaaaatgg
tgaaaataagaacatgttaagaacatttttaggctttaaactcaaaaagt
taagaacattcgaaggcttcaaagattttggatgttcctaTAACATAAAC
GTATATTCTAAAAAGGAACATCTTTGAACAATTATTTGCATAAGAGGTCA
AAACAGAAATTTCAGTGTCCAGGGGACCTTAGAGGGTAGTTTTctgagaa
aattattattaatttagTCTAGATTAGAAATGTATGATATTATCAATTTG
ATCAGGAAAAGAGACTCTTCGGAttaatattaaactaaaattgaaaTGAT
TACTAAGTTAAATTATTCACGTGTTCCAagtagtttttctttttaccttA
AAGAATATTGGCTTCATTAAAAACTATTTCTGACGTTTAGTTTGTATTTG
CATTAATTATAAAGCTCAAACAAGTAAACTGTATTTCGATCACGTTTTCG
AGATATCTTCGATATATGTAGAAGTATCACCAAAATGTATTGCACGATTT
ACACTATGTATTGTATTAATTTAcactatgaaaatatttttttacaaatt
ttaggtAATGTAAAAATCATAAACCTGTGACTGAAAACATAGATTGGTTC
AATGTGGGTACATGTCTCGAAGTGGGTGCTTCGCTAACACCACTACTCTT
CACTTTTGGACGTAGACAAGGAAACTTCTTTACAAATACTCTACGAAGTT
CTCGGTTAAAACGAATCAAAATAAAAGCGTCCAGTACAGGGTTCAAACAA
GCGAACGCCATTGCACCATCAAAATAAAGTCTGTCGACAGGTGTTCTTAT
TATGAATTCGATGACTTTGATCGTCAATGCAGGCGTCCATAGAAGAATAT
ACGTTATGACACACCCAAAACACATGTAGAACGCAAATAAGTTTTTCTTG
TGTGTTTGGTTATACGATAAACGATCTGATTGGTTATTGTTATTATCTTG
CGCATGCGTATTCAGTACAGTTCTGGTTGTCCGATGAATGGcgcgttttt
gtttttgaagcgTCCTAAAGATTACCACATTTGGTAATAACAAAAAGACC
ATAAAGAAACCAATCCCGATAATAAACGATAACATTGCGACCGGATCGTT
TACGACAGCTCCCGCATTTCCCTTCGATAGCTGTGATAACCGAAATGACA
CTATGGTAATGTACACAATCGGACTTAGTCCCATGAACGTGACATGAACC
CAAAGTTTTAAAGTTTGGTAACGAAATGGCCAACTAATTAATATACAACG
ATCAATGGTCAACATCACTAAAGATATATTTGCGTATGTGTAACCAGCAA
ATGAAAAAGTTCCCCACGGAAGGTTTGTCCATGGACCAACGGCGTTACTA
AGCCCCGTAAGAACGTGACCCACGCTCAAGTTTATCAACAACTGATGAGA
TCTACGGGCTCGAAGTATTTCGGACATTACGATAAAGATGATAATTGGTA
AGTGACAAGCTAAGACAAGGAAGCCTGTTAGACTAGTAATGTAATCCACC
ATGATATAGACGAGAAGCTTCGCTTACTTTTTTCATCATTATGATCCGAA
TGCTCATCGTTCGACGTTTATGTGTATATGTTGTTGTgtttaaatatgat
tatttcattcaaaaatattttgattatatTTGTTATCCTGTTAAAAAAAG
CAAAGTAAAAACATTGTTTAGGTTCATATAAAAGAAATCTTTCAATAGGG
AAATtgaaattaaagtctgtccaaatataattggcagtggaaacaagaat
gcctgtaacttttgatagtcaaatataattatggaaat

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_030855	XLOC_030855	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_143	supercontig	scaffold_143:433939..441326 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.92875	9.11423	2.44313	1.64383	4.43766	3.84047	8.32481	8.72075	6.6662	7.47803	6.06299	4.86717	7.10359	5.48993	5.57275	5.12037	10.2934	10.8024	5.77853	8.56595	9.80176	8.70701	9.97503	10.1902	4.71979	6.43638	11.2947	11.7143	12.1293	12.2834

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000276	GPCR_Rhodpsn

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity

Blast

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BLAST of TCONS_00048516 vs. Swiss-Prot (Human)
Match: CDIPT (CDP-diacylglycerol--inositol 3-phosphatidyltransferase OS=Homo sapiens GN=CDIPT PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 3.563e-64
Identity = 111/214 (51.87%), Postives = 147/214 (68.69%), Query Frame = 2

Query:  209 ENVYLFVPNIIGYARIILMFVSFYYMATDVWIATITYLLSQFLDAFDGHAARALNQCTKFGAVLDMVTDRCSTMGLLIVLASFYPKYQFFFIFVTVLDIASHWVQVYSNLSLG-QSHKTVKESGNWFLRLYYTSRPVLFTMCAGNELFFAMLYVMYFTTGPIVFGAYGVVHVIAMGCF---PICFTKNAINIIQLVGGFDSLAELDVEARQKAE 838
            EN++LFVPN+IGYARI+   +SFY+M      A+  YLLS  LDAFDGHAARALNQ T+FGA+LDM+TDRCSTM LL+ LA  YP    FF     LD+ASHW+ ++S++  G +SHK +  SGN  LR+YYTSRP LFT+CAGNELF+ +LY+ +F+ GP+V    G V +  MG +   PI   K+ I++I L+    ++A LD   R K +
Sbjct:    4 ENIFLFVPNLIGYARIVFAIISFYFMPCCPLTASSFYLLSGLLDAFDGHAARALNQGTRFGAMLDMLTDRCSTMCLLVNLALLYPGATLFFQISMSLDVASHWLHLHSSVVRGSESHKMIDLSGNPVLRIYYTSRPALFTLCAGNELFYCLLYLFHFSEGPLV----GSVGLFRMGLWVTAPIALLKSLISVIHLITAARNMAALDAADRAKKK 213

The following BLAST results are available for this feature:

BLAST of TCONS_00048516 vs. Swiss-Prot (Human)

BLAST of TCONS_00048516 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CDIPT	3.563e-64	51.87	CDP-diacylglycerol--inositol 3-phosphatidyltransfe...	[more]

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TCONS_00048516 (transcript) - C. hemisphaerica