TCONS_00048581 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048581
Unique NameTCONS_00048581
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length154

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048581 ID=TCONS_00048581|Name=TCONS_00048581|organism=Clytia hemisphaerica|type=transcript|length=154bp
TACAAGAAGTGAAAGAACACGGCACGAACGATACTTCGGATCAAGCCCTA
GGTGGTTGGGTCAGGGGTCTTGGCTACGCCAAGCCCCGAATAACTCTAAA
ACGAAAACGTTAAATTTACATCGCTTATGAAAGAAAAGTAGAGTTAAATC
AAAC
Run BLAST on NCBI

transcript from alignment at scaffold_143:315062..315215

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048581 ID=TCONS_00048581|Name=TCONS_00048581|organism=Clytia hemisphaerica|type=transcript|length=154bp|location=Sequence derived from alignment at scaffold_143:315062..315215 (Clytia hemisphaerica)
GTTTGATTTAACTCTACTTTTCTTTCATAAGCGATGTAAATTTAACGTTT
TCGTTTTAGAGTTATTCGGGGCTTGGCGTAGCCAAGACCCCTGACCCAAC
CACCTAGGGCTTGATCCGAAGTATCGTTCGTGCCGTGTTCTTTCACTTCT
TGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030892XLOC_030892Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048581-exon-scaffold_143-1491911889:315062..315215TCONS_00048581-exon-scaffold_143-1491911889:315062..315215Clytia hemisphaericaexon
TCONS_00048581-exon-scaffold_143-1510915933:315062..315215TCONS_00048581-exon-scaffold_143-1510915933:315062..315215Clytia hemisphaericaexon
TCONS_00048581-exon-scaffold_143-1575043694:315062..315215TCONS_00048581-exon-scaffold_143-1575043694:315062..315215Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_143supercontigscaffold_143:315062..315215 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048581 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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