TCONS_00048622 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048622
Unique NameTCONS_00048622
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1158

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048622 ID=TCONS_00048622|Name=TCONS_00048622|organism=Clytia hemisphaerica|type=transcript|length=1158bp
GTTTTGCGATGTCGGAAAATTCAAACCTGGCTTAACATGGTGCCGTGGAT
GTGTATTGGAGACCTTccaagaagaaaatttttgttcgattttgtTGGTT
GATTATGGTTTCGTTGTTCAGATCAATATTGACCAATTGTTCTTATTACC
AGAAATACTTGGACAACTTCCTCATCAGGCGAAACTTTGTGTATTGAAAG
AAGTGAAAGCTCCACCGACTGATTCCACATGTCTTCAACTTACTCTcgag
tTACTGTGCAACTTGACATCAAAAGGTCATGGGTTTCGTATCGAACTTCA
CAGGCAGGGTTTTACAGAGCTTCTAATTAAATTATGTTCAATACCAGACA
AAGATGTCGTTTTGCGCTCGTTTGCAGTCCTTGGGAACTTGGCGTTGAAC
TTCCACATTCGATCGCAGATTGGATATCTCGAAGGGATGAAGCTGATAAC
AACCACGCTTATGCGTCATTCTGATGACCAATCAGCTTTGAGAATATTGT
TGGACGCTTTGATCAATTTTCTGATCGAATGCTCACAAAACCGGAACAAG
ATTGCGTCAGAAAACATCCTTCTGGTTTTGATCACATTGTATCGTTCACC
GAAGACCAATGAAGATAATAAAAATCTTGCTTTGAGAGCATTGAAAAACC
TCGTCAGAGATGGATGGAGAATGTTGGATCCCATCAACAATGTCAAAGAT
ATCCGAGAAATAACTGACAAAGGTGTCGATGGAATGAGGGGATGTTTCGA
GCTTCCAAATCTCTGCGGTGACGAACTTATGGAAGAGGTtaagaaaagaa
gaaacagaAAAATCGCCAAGAGAGGtTTGCGCGATCATGAAGCTCTACCT
GATCCAACGTACAAAGCTATCAATATGGATGAACTTGTCAATAAACTAGG
GGGACTAGGAGCAAATCAAGACAGTGACACGGGAATATCAGAAGGAGAAC
ATGCCATGAATTTCAGTAGCGGTGGAGAAGGCTACCTTGGAAATGAGAGC
TTTGGTGACGAGGACGATGATAATTTTGACGGATACGTTTATCGGAGACG
ACTGGATGCTCTGGAAGACGAAACCCATTGCTTCATGTACGAGAGTAGTG
CTAAAAACATTTCTTCTATCAATATTGGAAATACTGTGTGTGGCTTCTTG
AACAGTCT
Run BLAST on NCBI

transcript from alignment at scaffold_145:55979..68575+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048622 ID=TCONS_00048622|Name=TCONS_00048622|organism=Clytia hemisphaerica|type=transcript|length=12597bp|location=Sequence derived from alignment at scaffold_145:55979..68575+ (Clytia hemisphaerica)
GTTTTGCGATGTCGGAAAATTCAAACCTGGCTTAACATGGTGCCGTGGAT
GTGTATTGGAGACCTTccaagaagaaaatttttgttcgattttgtTGGTT
GATTATGGTTTCGTTGTTCAGATCAATATTGACCAATTGTTCTTATTACC
AGAAATACTTGGACAACTTCCTCATCAGGTTTGTGTGTGAGATcaatttt
ttagagaaaaagccGTCGTTCCCCTGCGGCCTAAGATGATAAGTTTTCGA
GGTTCTGAAGCTCTTGGATATCCTAACTTGTAATAGAAACTACCTTGATA
TTGTGAACCCTCTGGGTATCCTCTTTTGCTCACCGCAAATTTCTGAGTCG
CATCAACTGCAACTAGAGAAGGTGTTTTAAGTCAGGGAAAGCATGATTCG
CATCCTTCTTCAGTAATAACCTTTCTATTCTTAGTATACAGAGGTCTTAC
AGATTAACTAGGTTATGtaacttactctcgggtacctaatagccgccccc
ctctaattaatttttcgaaaactttccacccaggacattcttattccaat
ttttggaaaatttttttggaagctccctcttttgtcctaattctgatGTA
TTAgactctttttcaaaaatttccaccctGGACACTTTACCCGAGAGTAA
CTAAAAAACAGAAATCATTTGATCTTGAAGATAGTTCTAAATCAAATTGA
ATGTTTTCttcagtgaaaattgaatacctGAAAACCGGGACAGCTGcttt
tataaatctttttttacaGGCGAAACTTTGTGTATTGAAAGAAGTGAAAG
CTCCACCGACTGATTCCACATGTCTTCAACTTACTCTcggtatgaaaata
tttataaatttttgtaacaaattctatatttctatttggttgagttgcag
gaggctctTGAGGCCCAATTTTACAACTATGGAAGCTTTCAATAAGCGCC
CTACTAGcgccttgaactgactaccctcCACCAGCTGATTCCATCTGTCT
TCAACTTACTCTtggaccatgttcagacgtcacggttccgttccgaaacg
aattgaaacgaaacggttccgaaacaagtgtgaacctCAAAATTCGTAAC
ATCATGAAAAAAGACgttacaaaacaaaacagatcgaaacggggTCGCtg
ccacttttttcatcggaacggaactgctccgttttttTGCTCCAAGACGT
TCCGAAACCAAAATGAAcgcactcgatccgtaacgaataTCATACCGGAg
tgaaacggaacagtaacgtgtgaacatggtcttggTATGACAATTTTCCT
AACATCGTTGAGGGTGTAACTATCCTAAGGGCGGATCTGGCTTTCTAGGA
TAGAATGACGTCAAATGTCTCTATTTAGAGGCGCGGCAATGTAatgttta
ttttaaattttgcaagaGGACCAAGTCTGTAATAACTCTCGGCATTGTAG
TAGTATTGAAATCTATTAATCTCTACTTTTTCCTTCGTtcaacttttcat
ttttcagagtTACTGTGCAACTTGACATCAAAAGGTCATGGGTTTCGTAT
CGAACTTCACAGGCAGGGTTTTACAGAGCTTCTAATTAAAGTAGGAATGA
CAttctatttattttcattgcttcaGAAATAAGCTTTTTTGTATaatcat
tttttttacaataagaTTGCTAGAACAATAATGGAAAGATGTTAGGCAAT
ATCAAATTTGTTCGACAAGTGTTCATTTAGCAAAAACAGGGTCTATAAAA
CTCAAATCATAGTAATTCAACTCTCTCTGTGCTTAACTACAAACTTTCCT
ACAAATAATTAGTTCTGATATTCATAGTGAATTAACGCGTGCTTTTAAAT
GTAATCTTAATTAATCATAAATTTATCATAAACTTTTGCTTCTGTTTTTT
AGTTATGTTCAATACCAGACAAAGATGTCGTTTTGCGCTCGTTTGCAGTC
CTTGGGAACTTGGCGTTGAACTTCCACATTCGATCGCAGATTGGATATCT
CGAAGGGATGAAGCTGATAACAAGTAAGTTCGCTTTTCAAGAACTAAATA
TAACAATGTGAGCAAAAAATAATGGCAAAAAGGGCCGGGGTGAAATGGTA
AATCTTATAACATAGTATCGTTAAAACGTCCAGAGGAAAAATTGAATAGC
TGTTTCCATTTAAACCAAGGGCTGtgaatttccaaattttcatcACCGTT
TTAATGTTCAATTATTACAGCCACGCTTATGCGTCATTCTGATGACCAAT
CAGCTTTGAGAATATTGTTGGACGCTTTGATCAATTTTCTGATCGAATGC
TCACAAAACCGGAACAAGATTGCGTCAGAAAACATCCTTCTGGTTTTGAT
CACATTGTATCGTTCACCGAAGACCAATGAAGATAATAAAAATCTTGCTT
TGAGAGCATTGAAAAACCTCGTCAGAGATGGATGGTTAGTAGCGAGCACC
TTACTAAAAACCGGGagttttcatctcgtttcttagtgagttccattttg
acgattttcaaaaaatagaagcctttcaagtgctttgacgcaaattcgat
tattttgctactgcaagagcttcgaaagttgaaagtgacgtcaaaaagtc
gaatgtttagagcccgtaaacccgaaaaagtcgcaaagtggaataggcgt
taattgcgtaaaaaaacgtgGGTGACTTCTAGTTTAGGCTAGATGGTTAG
TACAGTAAActatctctaattcgaacttgtaTAATCCGGATCTTTTGTGA
TTCGAACTATAGGATTGATCCCGACCGTATTTAAGTAGTGTAAAATGCCC
TCTCTAATTCTCTGATTCGATGATAAGTTTTTTAATCTCTTGAAGATCAG
ATTATAGAGAGGCAAATGTAGATATGTTTCCTGAAGCAACAACTAATTGG
TAACACaataaaatctttcaattcaaaCTTCCTTTGTATTACCAATAAGA
TAATTGCGCAATGACCTCAATTTAGTAGTGAACCGGTAGATTGACTACTT
TCGTATCGCTAGTGCAGTCACTGCACGAAATAAGGCGTTTACGCATCTGC
GTCAAAGTCAGTAAACCAATGCGAAATCATTAGTGAACTCGATGTTTACA
TTAGGCTTACGCAGTGCAGATATACAATTCTCATATATAGTTCTCATATT
GTGAGTTCTCTAACGACTGAGTTTATCCACTCTGCTCTATATGGGAAACT
CTTTCGGGAAAGCTTTCAGTTCCAGACTCAATCACTTCAACAACCCTTCT
GTTGAATGAGatgcagttactccaccagtgttACGAGGAGCTGACTGCGC
GTTTCGATACAAAATTCATGATTTCATCAAGGAAACATAGTGCCAGGTCG
TTGCGCTATTCACGATTAATTTTGGAAGGCAGAGGAAGCCGAGGAAAGCT
ATTCTAgaagaaaaattatcatttaatcttagaaaagaaaaaaatgatga
acaaaAGATTTTAACCAACGAAAGTTATCTAGGAATCTGATCTGAATCCT
TGTTATTATCTCAGGAGAATGTTGGATCCCATCAACAATGTCAAAGATAT
CCGAGAAATAACTGACAAAGGTGTCGATGGAATGAGGGTACGTTATTTAA
TTACGTCATCATGTTATTTACCTTTATACCCGACAGACAGTGCAGTCCAG
AGAGTTGTCAtccaaagaaatttaaaaagaaatataacTTGGCTCTGACA
TCATTGCACGATCAATCACAAACAAAACTATCGAAAGAAGCCTCACGTCA
GATCGCGTAAATGATCGATGCTTTCAGTACTAACAGTTTAACACTATATT
GTTTTCCTACACGTAGTGTACTTAGGCGCCCAATAAACGAGGGTGGTCGT
AATAAACGGGGGAGTTGGAAAATAGTCTCTAGACTACTTCTTTTGACCAc
tgaaaatattatcaaaaattgataaaaaaattctaggGAATAAATAATTG
ACTAAATCGAAAAATCAACAAATGCGGGGGGGGCTTTATTAGATACCTGA
GAATATCTATTCTATTAATTCATAATTAATTCTTTTGTAGGGATGTTTCG
AGCTTCCAAATCTCTGCGGTGACGAACTTATGGAAGAGGTtaagaaaaga
agaaacagaAAAATCGCCAAGAGAGGGTGAGAACTTTTTCATTCCAACTA
TAAACGTGCAATTGACTAAGAATATTAGGCTCTCAAATATCGAAGATTAC
TCAAATTAGGTCAAAATTCTGgaacaaattttaaaagaacaggCCCGGTG
GAATTGGAGAGACTGGAGAGACTTCAGTCTCCCCACtcttgagcaaatga
gatttttttctcaaattcctagcgagTTTTATGTCATTTTAAGCTTTCAA
CCACCCCACTTTAACGGTTGTTATACCGGGCCTGAATTGTATAATTGTGA
TAAGCACTTAAAATCTTCACATTCATAATCAACGgttaattattttgttt
tgttcttttagtTTGCGCGATCATGAAGCTCTACCTGATCCAACGTACAA
AGCTATCAATATGGATGAACTTGTCAATAAACTAGGTGACTTTCACTGAT
ACCCTGTACCAAGCTTTCTAGGCCATCTTTGAACAGAGTTTTTTAGAAAA
GTGGTGACCTAATGGTAGCAATACCCGATGTGGGTCAATTTATAATTAAA
TGAAATTGTTCTTTTCACCCACATTGAGAAGTGCTACCATTACCACTTTC
AAAAGCCTCTGATccaaaattttactttatcgAGATCGAGAAACTGTGTC
CGTGGTTTATAAAGGTTAGTGTTAACTTTAAAAGAGAGCTTTCGGTTGGT
ATTTTCACAGATAGATAATGGGGTACCTCGGTTAATTAAGTATAAAAAGA
AGCATaacccaaaaataaacatttccTTGGATTTCGGTTAATTAATGAAG
ACTCTAATGGCATCCCGATACGTACCAGAGAATTGAAGAGGGAAAATCAG
AAGCAcggtattttgttttttgtcggtggaatttttatttttgttaccGG
AAAAAAGGAGAggaaaagatttaaaataaaccagctgtgctggaagctcc
ggcttaagaggttaaaagatgtgaaagatgagcttgttgagttaatTGTG
TTAGAACGCTGCTCACAAActgctaatcagaacagatcagaaagcccagt
aataattctattgcagagcgagtatgagaaataattttAACGAATAAAAA
AACCacctggaagtttagctcttgtaagtgattacacatgcactttcttg
cctaaagaaccaaccccacccccgcccactcatcctcgactaaaaagttc
aaaattggagctaaaacatttagaagtcaatatctCCAAGtgcttgattt
gattgtccagataaaatttcggggagaaaaatagcctaaattagaggcca
cgggcttttagctaagcatttattttttctgttgggataatacttggagg
agagtaggataaaccaaataaaatggtacaatagtgtgtatgtaatgaat
agtggtatatttggaaaaaacctgtttcgggtttgaaaaatcttcaaaag
gaacggtcgccccagtcAATGAAATAAGCACGACAAAAAGTCCTTATAAc
actgaaaatttctccaatcttgttcaaatttacacaggaattgttttttt
gtatcCTTTACTgtattctcatagtgatatgtttgtaaaaaatctgtgtc
gggtttgaaaaatcaaaggaacggtcgccagccgcgatgaaattacgaca
aagtccaaaaacNNaaaaatcaaaaggaacggtcgcccagtcaaaaaatg
atgaatacaaaacaggattATTTTCAAccatacacataacaccacaaaaa
ctgctcagatcgtttttaaatttgcactgtaatgttgttattttagtatt
ctctttcgaattccaatggatgtgtgtttgaaagtttcattccattgtca
agttacagagttttatgcttttttttgtgcgtccataaaaatagagaagt
tagccatatgcaagatttaagcactcgagcagctgacgattcatggccaa
aatttctccaaagtctttccacattgttagaccagtatgcatcaaacNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgtccaaaacatc
atgaataatgatgaaaatgatcactatctttcactgagatttgcagctaa
gcccactttcggcagccatctttttctaaatacttacgcaatattatcga
aatccagataatccgtttttattaaatcggaatagatcatcggattagat
aaacaaaaaaaaatgtcttgaccgtcgttgttgtcggaagagagaattaa
aggctcctaggccggagcaaaaatGTACGGAGAAGGGCTTTCTGGTGAGC
TTTTCAATTACCAGACtattttattcatgatatgcaccactgcaatgtct
tctgacattacatcacggaaccaatcgctcattggttgtaagtgacgtaa
aatcagtcaatacgtcactttgaaccaatcagctattgggtggaatggaa
gacattgcaatggtgcatatcatgaatattgtaAAGTCTGTATGATGTTT
ACTGATGATtgtagaaacatgaaattacaGAGTCTTCTGACTAAAAAGAT
TTGTCTTTTTCTCTTGATTGTATATCCGCTCCTAGTTGGTTGAGCACTGT
TTGaaggggggtttgtaggggttcgaaataccgttttcccgtcaaaattt
ttgctgaatcccggaatcccgaaaattgaaaaaaataataacaccgtcac
accggtNNgaataccggcataatgacaaaaaataaggccaaataccgtca
ccgtctgattttaaaataccgttttcccgtcaaaatttttgctgaatccc
ggaagcccgaaaattgaaaaaaataataacgccgtcacaccggtttgtac
aggttcgaataccggcataatgacaaaaaataaggccaaataccgtcacc
gtctgattttaaaataccgtcaaatcccgtaataccgtactaaaaaaggg
ccaatcccgttataccgtaaaagtacaaacccccccccccctttgaaGCT
TCTGTTATTGACGTTTACGTAACCATTTTGAACCAACCttaactttattt
ttattcaGGGGGACTAGGAGCAAATCAAGACAGTGACACGGGAATATCAG
AAGGAGAACATGCCATGAATTTCAGTAGCGGTGGAGAAGGCTACCTTGGA
AATGTAAGAAATCGTTTTCAATCGTTTTCATTcataatattttaatgaaa
ttagtgATTAGTGAAATTTAATGGATTTTAGCCCATGAATCGAAAACTAT
TCGAGTTCTTATCTCTAATAAACGAGATCTAAATATCGCACATGTTCAAA
GCAGAGGCTGTAAAACCTGGGTGCGCAACATAGCATTTTTAACATTAATT
TTTACTATCACCTTAGCAAGATCCACTTAAGATAAAGTGCTTCATGGCTC
AAATTTAatacttaaagggacataaaagtagtaaaatgtaaacattgcgc
gaaccacgtgtcattaaagagaacaattgaaatcacgtgtccaaaacaaa
cttgtaaaacaattgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNgcacaaacttgtaaaacaattgaacaatcaaaattagccatatt
tggtttgattttttattttgacatgtgacatttgttttgattttgtatcc
cctgcatacagtttgtttacaaatttcgcaagtactgttatgtcccttta
aagtttCTTTCTGAGAAAGTATGCTCTAAAATATTCAGGCAACTCATGGA
CACTTTATTTATTCTTGTCTTGAATCGATGATTCTTTGTAACAGGCTGAA
AATTTTccttactctaaggtcccgaataaacgTCCCCATCCGGAtgttaa
ttttcgaaaaataacaGGAACCGCCCCGTTCTCATatgccccccccccgt
ttattaatttctgaaatttcagcTTATAATCACCTTATTTTGCGATTTTT
AGAGATACAATTTCGGACCCTTTCTTTTATTCGGACCCTTTCCCCCTTAt
tagattttgaaagaatttcggATCTTCCCTTTTATTTAGACCTCCCTGCT
ATTCGAGACTTTAGAGAGTCGATCGATCTTACTTTGTAAATGTTGAATAA
AATCTTCCCAATGTTTTTAGGAGAGCTTTGGTGACGAGGACGATGATAAT
TTTGACGGATACGTTTATCGGAGACGACTGGATGCTCTGGAAGACGAAAC
CCATTGCTTCATGTAAGCTTTTATGATGGTTGGATGGAGTGATTGGGTGC
CCGCGCCATAAACAATGGGTTCCTAGATTAAATCCCCGCTCTTTCCAATC
TCCGTTCAGCTCAAAGATAGCCGTAGACAATTACTAAGAGGGTTACCACT
TAAAAGAGCTTTTCGGTTTCTATAGCTGAAATAGCCAGACTTAAAGCAGG
TTAAAAAATAATCGTTTGatcacgtaaaatatcgacttttTTTAAGGGGA
AACGGATTTGATACAACTACAATCTGTGACTAAATGTTGTGGCAAGAATT
CCCTCCCCTCTAGTatcaataccgagtttatgtatgtgtgtttttcagcg
acggagacggtaaggttctaatttgactagatcctgaccagctgaggacg
acggtaaatcagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcc
gtcctcaaaagtgcaaatacataaactcgctaatgttgATTGGTGGAAAG
GCTGCCATTATGTCCAGAAAAAAGCTGATATTAGGGGGACgggatttttc
aagaaattttcacATATTTTGTCCCCGATTGTAGAGGGTTTGGAGAATTT
AAGAAATAACGAACTGCTGTAATAGTATTTGATTTAAATGATTAATTTTC
CAGGTACGAGAGTAGTGCTAAAAACATTTCTTCTATCAATATTGGAAAGT
AAgttttaattcatgatattgttttctacggaaataccccggttttagcc
agtagtggcaaattaaactagacaaaagttgtataaaatttgccactact
ggcaaaaaccggggtcctCCCGTagaaaaaattacgtcatgaatatcatt
aatCCACTGCTTAGTTAATTTGGGTTATCCATTTTTTTCTCTACAAACTg
tatatacagtggagtctatttcattcgaacctctataactcgaatgtctc
cttaaaggttttatttttttcctcaagtgttcccgtttcatatcagacac
aatttttcatatcaggacagtgtctgcctattgttatattgtgctgatat
aagcaaaaaatgtctttcttttcctctttctgacaaatcttgctccacat
ccgtgtcaattcaatatcaaaaagcttgtaaattaaaattgataagtaag
caaacgatatcgattatcactcttattttaaaaacaaaacttttttatga
taGATAATTTCAGCCTGGTCTGAGCAATCTCTCCATTCTCATCAAAGAAC
ATCAATTAAtgtatctcctaccatttgcttgcacagcattttttaaacaa
aagaaaaaacaactttctccATCTCCTTTCGGCGCCGTGCGGCGAGCact
aaaaattcttttgttcattCTGCTTTATCAGCATAAAGGCGCGCCTTTtt
ttctatatcataaaaaagaGAATCTCTATATCATATTTCAGGTGATTCGA
TCTCGTGATTTTATCAGTAATTATCCGATGGAAAAAGTCAATTAGTGTGT
TGATCTTAATAAAGATTTCCACGCTGATATCTTTTTAATTAAGTTTTCTG
CGAACAAGGAAGCGTAAAGGACGCACTTGTTATTAAAAGCTATTggtact
taatatttttttgcaaagatTGCAGATTTAGATTGCAGTTTTGTATGTAC
TGTGAGTTAATTTCAAAAGGCACGCGGTTAAtactttttttcgattttcc
gaTGTAATCAAAAGTCAAATACTTGAATAAACTCGCGTCTTAATTAACGA
AGCAAAAACTTTCAAGATGGAGATGACTACAGAATTCCCTATAACGTTCA
ACAACCATCACTGCTACACTAAAGAATGCGCGGAGAAATATGCAGTGTGG
ACAGGGATTAACGTTGCAACCAATATACATATTTTTTACGCTATATGCTT
AtggtatttttttaataatcaGAAGAGATTTCATGGGAAATGTTTACACT
GGAATGCTTTGTACTTGCGTAAGTAgccaataaatattttaatacaTATC
TGTTAGTTCCGCTATCCCTCCCCAATTCCTTCTTTACTACATATCTacag
ataggaacaatagaccttttcataaattacgtcacgaacatcacttgcct
cattttgaaattattgtaatggtgattaactcccagtcGATTCTAttaca
actactttctattcataaaaaaatcatttaatgtctcaagggatatgatc
accatggtaattgtttgaatacgaggccagtgatgttcgtgacgtaattt
atgaaaaggtctattggaagGTCGATTAGGACTTGATAtattgcacactt
gttccttagtATCTGGGCGTGTTTTTGAAACTCTGTTTTTTGCTTTACAT
AGCAATAAAAACTCATTAGGCCTCTGACAAAATACTGTGTGGTCTGCACG
TTCAACggcgtttttttttcaaatgccaAGATTAGACTAATACTCTGTAA
TTATGTAGCCGTCACCCGGCATCGCACCCACAGAGTAGAGTGTTGCATAT
GCACGAAAAAGCCCGTTGGATTGTGAATAGGGTGTTTTAGGGAGGGATCC
CAGCTCAAGGAACAAAGAAATACCACCTtaaacaaatttcttttttctag
atGTCTTTATCAGCATGGTGACGTCATTGATCTTGGTATACTTCTCATCT
CTATCGCTGAACTATCTTACCGCAACTTCAATGTCTATCACTTGGCTAAT
CTTATCTCTCCTTCATTTGGTGCTGGTGAAAGTTTGTCAACGATGGAACT
GTTCTTTTCACCAGAATTTGGAAACTTTTCCACGTACACTGGAGTTGTAA
TCAATCTTTATTTGCATAATGTTGTATTCATTTAAATTAAGTCATCTTGG
CTTTGGAAGAAGATTATAAATGTAGGTTTGCGTAACTGACCATCATTATC
AATCAATTTGCTTGGGATAACACAATGTCAATTACTTGGTTCTTTTTATA
AATTCATTTAGTGCAATATCATATCATATAgtgcaaaatattttacctcg
ttaattttaaatattattaTGAATGAAATCTTCCTGACTTTGAAAGAAAA
TCATAAATGCAGACTGACCTAACCGCCCattattttcactttcttaCATT
ATCTTCAAAGTCGCTCACTTGTGACTGTTTTTATCGTTGTCTATTTTGGT
GCTTGTGAAAATTTATCAATGATGGAATCGGCCAGCAAATCAAGCAAACT
CGAGATATATGTCTTCACAGTAAAATCTTTATCTCAACACGGCTTTCGTC
ATTGTGATATACCTTATTTTCTAgattttggagtttttttggaaatttgt
aaaTTTCATACTTTGTATATAATCTTTATCTCTTTTTTTGTAAGatagaa
attgaaaatattttttattcatttttgtccctatcaaattatttttttgt
ataaaaagtaTAACACGATTAAAGTAGAAATATACCCGACGTCGCTAAAA
TCGTCGTCACTTTGTTAATTTTAGCTGACGTATAGTTTTTCTCGACGATA
ACATCGGGTTTTCAACGAAATTCAATAAAACACCTCTATAAATAGCagca
cacgttttttataagagcaaactatataagaacaaaaggtcTCAAtagcc
aaaatgctaagaacattttaaggctttgtggactccatatttcttaggaa
aatggtcaaaataagaatatgttaataagaacatttttttaggcttgaaa
ctaaaaagtttaaaaacatccgaaggcttccaaATGTTTGCCTAAGGTtc
aagaattcatgatatgcaccattgcaatgtcttccgttccacccaatagc
tgattggttgaaagtgacgtattgactgcttttacgtcacttccaaccaa
tgagctattggttccgtGACGTAAGGttcaagaatatgtgctaaaaatgt
attttccgTCTTAAACGAAAAagtttgctttgaccactggtAATACTTGT
CTTGACTATTTCTTTTTTAGTACTGTGTGTGGCTTCTTGAACAGTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030911XLOC_030911Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048622-exon-scaffold_145-1491911889:55979..56156TCONS_00048622-exon-scaffold_145-1491911889:55979..56156Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1510915933:55979..56156TCONS_00048622-exon-scaffold_145-1510915933:55979..56156Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1575043694:55979..56156TCONS_00048622-exon-scaffold_145-1575043694:55979..56156Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1491911889:56748..56817TCONS_00048622-exon-scaffold_145-1491911889:56748..56817Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1510915933:56748..56817TCONS_00048622-exon-scaffold_145-1510915933:56748..56817Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1575043694:56748..56817TCONS_00048622-exon-scaffold_145-1575043694:56748..56817Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1491911889:57486..57568TCONS_00048622-exon-scaffold_145-1491911889:57486..57568Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1510915933:57486..57568TCONS_00048622-exon-scaffold_145-1510915933:57486..57568Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1575043694:57486..57568TCONS_00048622-exon-scaffold_145-1575043694:57486..57568Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1491911889:57881..58001TCONS_00048622-exon-scaffold_145-1491911889:57881..58001Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1510915933:57881..58001TCONS_00048622-exon-scaffold_145-1510915933:57881..58001Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1575043694:57881..58001TCONS_00048622-exon-scaffold_145-1575043694:57881..58001Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1491911889:58199..58412TCONS_00048622-exon-scaffold_145-1491911889:58199..58412Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1510915933:58199..58412TCONS_00048622-exon-scaffold_145-1510915933:58199..58412Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1575043694:58199..58412TCONS_00048622-exon-scaffold_145-1575043694:58199..58412Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1491911889:59493..59565TCONS_00048622-exon-scaffold_145-1491911889:59493..59565Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1510915933:59493..59565TCONS_00048622-exon-scaffold_145-1510915933:59493..59565Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1575043694:59493..59565TCONS_00048622-exon-scaffold_145-1575043694:59493..59565Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1491911889:60019..60104TCONS_00048622-exon-scaffold_145-1491911889:60019..60104Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1510915933:60019..60104TCONS_00048622-exon-scaffold_145-1510915933:60019..60104Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1575043694:60019..60104TCONS_00048622-exon-scaffold_145-1575043694:60019..60104Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1491911889:60440..60513TCONS_00048622-exon-scaffold_145-1491911889:60440..60513Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1510915933:60440..60513TCONS_00048622-exon-scaffold_145-1510915933:60440..60513Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1575043694:60440..60513TCONS_00048622-exon-scaffold_145-1575043694:60440..60513Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1491911889:63237..63331TCONS_00048622-exon-scaffold_145-1491911889:63237..63331Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1510915933:63237..63331TCONS_00048622-exon-scaffold_145-1510915933:63237..63331Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1575043694:63237..63331TCONS_00048622-exon-scaffold_145-1575043694:63237..63331Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1491911889:64349..64440TCONS_00048622-exon-scaffold_145-1491911889:64349..64440Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1510915933:64349..64440TCONS_00048622-exon-scaffold_145-1510915933:64349..64440Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1575043694:64349..64440TCONS_00048622-exon-scaffold_145-1575043694:64349..64440Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1491911889:65232..65276TCONS_00048622-exon-scaffold_145-1491911889:65232..65276Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1510915933:65232..65276TCONS_00048622-exon-scaffold_145-1510915933:65232..65276Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1575043694:65232..65276TCONS_00048622-exon-scaffold_145-1575043694:65232..65276Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1491911889:68549..68575TCONS_00048622-exon-scaffold_145-1491911889:68549..68575Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1510915933:68549..68575TCONS_00048622-exon-scaffold_145-1510915933:68549..68575Clytia hemisphaericaexon
TCONS_00048622-exon-scaffold_145-1575043694:68549..68575TCONS_00048622-exon-scaffold_145-1575043694:68549..68575Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_145supercontigscaffold_145:55979..68575 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	2.8295e-08	0.00012313	0.00308802	2.74783e-05	1.36397e-06	4.83014e-10	0.138053	0	0.287128	0	0	0	0	0.132332	0	0	0	3.42486e-08	0.000312504	0	0	1.89885e-07	0.00107326	0	0	0	1.34631e-05
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048622 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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