TCONS_00048682 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048682
Unique NameTCONS_00048682
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1114

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048682 ID=TCONS_00048682|Name=TCONS_00048682|organism=Clytia hemisphaerica|type=transcript|length=1114bp
GGCCCTGGTCATACGGTATGTTGGTTTGAAGCTGGTAATTTCAGCAATTT
TACtaaattaattcaaaatgatTGAGGGAAGAttgtaaaagaaaaagatt
taaaaatcaaacttttgttCTAAGTCACCCTCATACATATTTTTCTTGGT
TGTTTTAGTCCtataaaaatcagaaagaactGAAAGAAATTATTACATAT
AGCCCGGGCGTTATTCAGCGCTGCCAAATCTCACTAGGCACAACATAAAG
GAGATAAAAATATCTAGATTATTTTAGATTAGCTCCCAAATAATTTGCAC
CACTGTTTACTTGCTGCAGACGCCTTGAAAGGACCACATGTTTCTTCCCG
CCTCCAAATCAGTCTTTTCTTCCAGTCGCCTGGGATTCAATCTTCTGAAC
AGAAGCCACAAGTTCCTGAGCACTACATCCAAAAACAAGATGCCTTACCA
ATGTTACTTCGATATTGCCGTTGGAGGTCAACCAGTGGGACGAGTTGTTA
TGAACATCAGAGACGATGTTGTACCAAAGACAGCTGAAAACTTCAAACAA
TTGTGCACTGGTGAGAAAGGATTTGGATACGCAGGATCAACATTTCACAG
AATCATTCCTGGATTCATGTGTCAAGGTGGTGACTTCACCCGAGGAGATG
GCACTGGTGGCAAATCCATCTATGGAAACAAATTCCCAGACGAGAACTTC
CAATTGAAACACACAGGTCCAGGCATCCTTTCAATGGCTAACGCTGGTCC
TAACACCAATGGatctcaatttttcatctgcACTTCCAAGACACAATGGT
TGGACGGTAAACACACTGTTTTTGGAACGGTTGACCCAGATTCGATGGAT
ATTATTAAGAGGATGGAAGCAGTAGGAAGTGAATCCGGCAAGTGTAAAAA
ACCTGTTACAATTTCTAAAAGTGGTGTATTATAAACCCTTACTTGACTGT
ACATtgtaatacttttttatttgcaattttgtaattttattttatggtGA
TAATCATAAGGGATGCTGTAAAAAGCATTGAATTGATTTATACAAAAACA
GAAAtaagcttttgaaaatattccttGTTGTTAAACtttactaccttaag
ggaagaaattttcg
Run BLAST on NCBI

transcript from alignment at scaffold_145:267430..276276-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048682 ID=TCONS_00048682|Name=TCONS_00048682|organism=Clytia hemisphaerica|type=transcript|length=8847bp|location=Sequence derived from alignment at scaffold_145:267430..276276- (Clytia hemisphaerica)
GGCCCTGGTCATACGGTATGTTGGTTTGAAGCTGGTAATTTCAGCAATTT TACTAAATTAATTCAAAATGATTGAGGGAAGATTGTAAAAGAAAAAGATT TAAAAATCAAACTTTTGTTCTAAGTCACCCTCATACATATTTTTCTTGGT TGTTTTAGTCCTATAAAAATCAGAAAGAACTGAAAGAAATTATTACATAT AGCCCGGGCGTTATTCAGCGCTGCCAAATCTCACTAGGCACAACATAAAG GAGATAAAAATATCTAGATTATTTTAGATTAGCTCCCAAATAATTTGCAC CACTGTTTACTTGCTGCAGACGCCTTGAAAGGACCACATGTTTCTTCCCG CCTCCAAATCAGTCTTTTCTTCCAGTCGCCTGGGATTCAATCTTCTGAAC AGAAGCCACAAGTTCCTGAGCACTACATCCAAAAACAAGATGCCTTACCA ATGTTACTTCGATATTGCCGTTGGAGGTCAACCAGTGGGACGAGTTGTTA TGAACGTAAGTGAAGTGAATTATCCGAAATTTGATCTCTTCTTCCTATAA ATTACTCCTAATTCTGCAACTCCAGGTCAATTTTATATTGGGCAGTTCAA GTTATAGTACGTTACCCTCCTGTGGACGACATGGATTTTCTTTAACAGTT TACTTTTGAAAAACTTCAGGATTTCTGTACCCAGTCGTCCACAGGGGGGT AATGGTGTTTTTCTGGAACTGCCCATTACAAAGAAAGATTTTCACTCAAA ACCACTTTCAAATAATTATTCCTTTTCTCAACCATTTAAAGACAAATCCT GTTCAAAATATCCAGACTCCCCCACTCATTACCTCAAAAATGTAAGGATA ATGGTCCTAGGACTTTTTAGTATGAAATATAGATAGATAGATAACTTTTT CAATTGATAACTGCCAATATCAATATCCGGAACTATTAATTCTTTAGGTT TGTTTTGATGACCAGCAACTTATATTTATTTGTTAAAGCCTGTGTATACT GGGAATAAGGAATTCCCTAACTTTTTCATGTATGTCGGACTTGAAAATGC ATGTGTCAGTTTTTAGTCAAGGGAATAACAGTCGAGGATTATGCCCTAAA TAAGAGAATACCTAAGTTAGAGGATTACCTTATTTAGGAGATTTCCAGTC TCCTATTTAAGAGAACGTTACCTAAACTGGGAGAATTCTGTACGTTTCCA CAAATTTACTTCAGAGCAGACTGTTTGCGCAATATGAGAATAAGATCACG TTTCCTTGATTCCAATGACCCAAAAACCAAAATAAAATACCTTTTCATTC TTTTTCAAACTTCGAAAAACCATAAATAGCCTCATTTGCATGTGTTGACG AAATTTTTAAAATAATGAAGAAACACCCTTGACCTTCAAAACGCGTTTTT TCTCAAACCCCCTTATTTAGGAGAGACAAGAGGAACTCACTTTCTGTTTG ACCTGCGTTTTGACCGCGCAAGCGTTTCTTAAATATGGCCCAATCTATAT TATTACTTTTCACGAAATTCTCAGGATGTAGATCAGCCTTTAGATTGATA AACCCTAACCAACCTAGGTCCACGAAACAAAAGCAGAACTCAACCAAATT TTAGTAGAAGGGAGAAAAAACGTGCTGAGTCGATCTATGAAGTTCAAAAC TTGCGCAAAATGATGAGAAGGCCAAAAATCAACGAAGAAAGAATAGTCTC CTAGTTAAGAGAAGGAAATCTCCTACTTAAGAGACCTTCTCTTAAATAGA GTATAACTCTTATATAGGGCATAATCCTCGACTGACTGTTACTTTTATAG TAATTCAATGAATTGGATTATGGTGATTGTAAGGCTCTGATATCTGATCC TAATTAAACTGTGGTTTGTATATCTGACATAGCTGCAAAGCTCGAACTTT TTTGGATAAAAAAACACGTGTAGTCTAGTTTTTTTAAGATCAACCATGAC TATTAACGAAGCTTCGACTGTTTTCTCATATTTTCCTTAGCTTGTTTAAG CTTTGACTCATATAATTGGACATTATAAACTTTGTTTATGATATACCTGT GGATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NAGGAAAAAGCGAAGAAGTGAGCGCTACGATAAGCGATTTTTGATTTTTT CCTTGGAATTTTTAGTGGAGTTTCATTTTGGTCATCAATGCCACAGCTAA CTCCCAACATTCCGATATACCTACCCACTAACGGTCTTTTCCCGTTACGC GTGGCGACTTTGAATATGGACGTCGCCCCTAAGAGAAAGAAATCTCCTAC TTAAGCGACCTTCTCTTAAATAGAGTATAACTCTTATTTAGGGCATAATC CTCGACTGAATAAGTAATTACCAATGTGTAAACTTTTCACTATATCTAAA GAATTGTGGGCTGTGCAAAATTCAAGGGCTGTGCAGGCTGTCCGACAAAA AGGAGACAATAAATATCAGTCTGTTTGTTTTGGTTTTCAAAACACACAAA GAAATTAAAAAGAAACATGCGACAAGCCTTAACATTGAATAGAAAATTTA TTTTTGAGGGACCCCTAAAATCAACTGAATTTCTTCCATAATCCATATAC ATCAAAAAAGATGTAAGATGAAAAATTGGCTGGATTTCGGAGTGCTTTTT TTCTGAAATTTCCTACCAACTGTATAAAATTTTTTGCCCATTTTGACAAT TTCCTCATTTTAGTAGGCAGAGGCTCGTTATAAAATTTTGATGTCTGAAA TGACCCTAGGATAGGCTAATCATTTTTTCATATGCACGTAAAATCTTACT TTAGACCTTAACCCTATTCGTACTAGGCTTTTAGGGGCTGTTCCTGTACC TTTTGATGTAGTTGGCCTTTTGCTCGAAGTGGGCAAAAACCTAAAATTTC CTTTGCTCTTTTAAAGAGCTATTGTATTATAACAAAGGCTTTAAAAAAAA TTCTGTGAGTCTAAAATATTATTTTATCCTAAATATTCAATAAATTACAG TCAAAACGATACATTCAACATAAAAATTAAATTTGTATTCATTGGAAATG TGTCAATTTTTGTGACACTTTACTGTCAAGAATGTCATCAGTGTGTGAAA ATTTTTAGTTATCAATTTTTTTTTATTTTGAAGCTAAATAAAAGTTAGGA ATTTACAGAAAAATTCATGCCAAAAGCTCCATCAGTTCAGGAGCTGTTAA CGTTAGCTTCACCCCCAAACAGAAACAGCCCCCCTCGTACGAATAGGGTT AAGGAAAATCGTTCGTAAGGCTGACTTTTGGAAATTTCCCAGGCATGACG TAGAGTTTCTATTGAGTAAAAATTTAAAAACTTTTAAACATAAGCAAGCT CTAATTAAGGCCCTAAGACACTACATAAGCTTAGGGAAATTACCCCACTT TAATGTAAGTTCTTAAGTGAAATTTTACAAGCATGTTGAAAAAGCTTCAA TGAACTAAACAAATTTAAACATATTGAAAATCAAGAAAGAAGCCTACAAC CCTATTTTTAGGCAGTTTTTGGCCCAAATTGGCCCAAATATATTTTTTTT CGAAAATCAGGCTCTGACACAGTAAGCTTCAAATTTTAACTAAATCATTA TGTTGAAGTATAGAGGGAAACTGAAGTAAGATTTGGAATACCCCATCTTG TAATTTTCCATCTTCTTTCAGATCAGAGACGATGTTGTACCAAAGACAGC TGAAAACTTCAAACAATTGTGCACTGGTGAGAAAGGATTTGGATACGCAG GATCAACATTTCACAGAATCATTCCTGGATTCATGTGTCAAGGTGGTGAC TTCACCCGAGGAGATGGCACTGGTGGCAAATCCATCTATGGAAACAAATT CCCAGACGAGAACTTCCAATTGAAACACACAGGTCCAGGCATCCTTTCAA TGGCTAACGCTGGTCCTAACACCAATGGATCTCAATTTTTCATCTGCACT TCCAAGACACAATGGTATGTACCTGATTTAATAAATTGGCCATGTGATTC ATGTTAAATGTGTGTTTTCTTCATGCTTCTATTATGTACCTGATTTAATA AATTGGCCATGTGATTCATGTTAAATGTGTCTTTTCTTCATGCTTCTATT AGTATAGTAGAGGTTGCCTCTCTTTCTGTCCTGTCAATGACGACGTATTA CCAAAGATTGCGTACCATAAATATTTTCAAACCAATGTACAATTTTCAGA TAAAAGATAAATCATTTCTATACCTCTAAAAACTCAAAATAGCAACGAAA AGGCAATACAGGGTCCACATTTATTATCAACATGAAGGTAATGAAGATAG ATGAAGAGAATTCTTGGTGATGCCATAAATGGTCGTTCTAATCTTTTATA AATTTATTCAAAGCAGTATTTCTTTAACGTACCATCATTGGAAGCAATAA CCATCAATTGATAACTTTATAAGAACAGAAATTCAGATATCTATCATCTT AAATATTCCCACAAGTACACACAAAATTAATCATCTTATTCTAAAAGCAA CCAAACAGCTGTTTGCCTCTGATAAGTCAGGTGAGACCAATTTAATTTGT TGTTCTACAGGCATGACAGACCCTATTTTCGCTAAAATCAAAAAAATAAT ATTATTGGATTTCCACTACAATATATTTTAAACACTACTTATTTGTAAGA ATCAAATTTAAGAGCAGATGCAGCTAAGAATCAGAAGAGCTCAATATAAA GTGGGATCATGGGGGTCTTCCAATCTTCCTGAAATTTTGACACAAGGTCA CATATCTTGGGTGGATCACACACAAAAAATTTCAGCTCTCTAGCAACAGC GGTTGGTAAGTTATGCCCAATTCACGAAAATGTAATTTACAGACCAGTAA TTCACTGACCAGAATTTAAAACTTTAATAACTAGGCCAATTTTGATCCGA TTAAGCTGAAATTTTGCACACTGCTAGATTTTGGTACTATCTTTCAGTTT TTGATGAAAATTTTTTTTTCGGGTCAACAGGAATTCCGCCATTTTGATTT TTCAATTTTCCAAAAAATCTTTACCAGATGACTCTAAGCTTGATTTCCCA AAAAAGGGTCTTCAAATTTTCAACTTTTGTACCTTTTCGGAAAGCTCTAA GGCTGGACTTTCAGGATGTAAAAAAATTTCCATGGAGATATTTTGTCAAA TTGAGAAAATGACCGCCCAAGTTCAGCTTTTCACTGATTTTCATTTTTCC CTCGTTTCCAGGCCCCCGTATTTCAGAGTGAGAGGTCAAATAAAGATTGG AAATTCAACATTTGGATTCAGATTTTTTAGTCGTTTCAGGATATGTATGG TTATAAGTACTTTAAAGCAATATCTAAAGAGCTATCAGGCTTAGAAAGTA CAGGTAAAAACATGCGATTTAGGCAGATTTTAAGTTTTTCGCAGTTTCCC ACCCCCTAAAGCCCCTTCTGGGTGAGAGGAGTTTCTGTAAGCTGCACCTT TTGGTCCATAGTTGATGTATTCCATACATACTAATACAATATGCTGAAAG AAACTTTCTCAGATAGCTCTACTTCAAGCAAAATCAAGCTGAAGTTTGAG AAATAACGGTAGATTACCACCTTTTACCAGATAACCAGATTTTAATACAT TTAATGGTCTAAGTAGGGTTTTGGTGTCCCTCTATATTGATTTTGAAAAG AGCTGATGATATCATTGCCAGGTTTTCTCAGATTCATCAGAAGAGTTGTA ATGAGAGAACCAATTGCCAGGTTTTTCTCAATAATCCTTCAACTTTAAGT TAACAATGGAAGTGGTTTGAAAGCTCTATGGGCTATGTGACCTTGTGTCA AAATTTCAGGAAGATTTGAAGACCCCCATGATCCCACTTTTTCTGATTGT TAGGTGCATCTGCTATTAAATAAAATTAAATCAAGAAATTAAAAAATTTA GAAAATCAAGCATTCCATACATACACTAAGATTTTTTTATGATCTTCATC GAAGATTAAAAAAAGTGAATTTTTGAACCAGATATTTTTTGGAAATCATT TTTCACCGACCAACCCATATTTTGCTAACGTGTAACGATGTGCCTGTAGA ATATACGAATAAATAAATCAACAAATTAAATTGGTCTCGCCTCAGAATAG AGCAAAGGGCATTGACTCTCCATCGATTTTAATTACCTTCATGCTCTTTG AAAATTTATTTGTGATTATCAAGCATAAAAATTTTACAAATGAAGAAAAA TAAAAAATGAAGAAGAAAAAATCAACTTCTTGTAGAAATGTGGTATAATT ACCATTTTAATCTTTGACCATCATCACTGTGAAAAAGTCTTCAATCAAAA GATATCAAACAAAGTTTGTTATGCGTTGATTGACAAAAGGCTGTTTTTGT CGTTTTTTTACTACTTTGTAGAGTCGACCAGCAATAATTTTTGTTTTGTT GACGAAAATAAGTCCCATGAAAATTAAATTATTCAATAGAATATCCAACA GAAGAATAAAAAAATAATCTGAAAATTGAAAAATCTGAGTTTAAACTGTA CTTTTTACCAGGTTGGACGGTAAACACACTGTTTTTGGAACGGTTGACCC AGATTCGATGGATATTATTAAGAGGATGGAAGCAGTAGGAAGTGAATCCG GCAAGTGTAAAAAACCTGTTACGATTTCTAAAAGTGGTGTATTATAAATT CTTACTTGACTGTACATTGTAATACTTTTTTATTTGAAATTTTGTAATTT TATTTTATGGTGATAATCATAAGGGATGCTGTAAAAAGCATTGAATTGAT TTATACAAAAACAGAAATAAGCTTTTCATCTTCATCTCCCTTAAAATGCA TAAAATACCCCTACTAAGACGTTTTCTTTAACAAAATCACAAAAACCCTG AAATCTTCTAACAAATCAGTCTTTTCAATCCCCTTGATTTTCATATCCCC AAAAAAATTCAAGGGTATAAATCTTGCACCTCAAGGGTCCCTCAAATGAT ATTGAATTTTCAAGGAATTAAAGGGTCGTTNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNTTTGAATATTTTCAAAAAAATAATTTTTTGCCCA GCCACCTGATGACGTCATCTGGCAGGTGGCCAGGTGGCAAAATTTGGTGT TACTGTTTGAAATTAAGTTTTATACCATCTAAGGATCATCTGTGCCAAAT TTCATGCTTTAATCACCATCTGAAGTATTCTTACGTTTTTATGTGCTACC AGACCTCACTATAAAGAAAAATAAAAAATGAGGAAGAAAAAAATCAAGTT CTTGTAGAAATGTGGTATAATCACCATTTTAATCTTTGACCATCGTCACT GAAAAAGTCTTCAATCAAAAGATGTCAAACAAAGTTTGTTATGGGTTGAT TGACAAAAGGCTGTTTTTGTCGTTTTTTTACTACTTTATAGAGTCGACCA GCAATAATTTTTGTTTTGTTGACGAAAATAAGTCCCATGAAAATTAAATT ATTCAATAGAATATCCAACAGAAGAATAAAAAAATAATCTGAAAATTGAA AAATCTGAGTTTAAACTGTACTTTTTACCAGGTTGGACGGTAAACACACT GTTTTTGGAACGGTTGACCCAGATTCGATGGATATTATTAAGAGGATGGA AGCAGTAGGAAGTGAATCCGGCAAGTGTAAAAAACCTGTTACAATTTCTA AAAGTGGTGTATTATAAACCCTTACTTGACTGTACATTGTAATACTTTTT TATTTGCAATTTTGTAATTTTATTTTATGGTGATAATCATAAGGGATGCT GTAAAAAGCATTGAATTGATTTATACAAAAACAGAAATAAGCTTTTGAAA ATATTCCTTGTTGTTAAACTTTACTACCTTAAGGGAAGAAATTTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030930XLOC_030930Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048682-exon-scaffold_145-1575043694:275772..276276TCONS_00048682-exon-scaffold_145-1575043694:275772..276276Clytia hemisphaericaexon
TCONS_00048682-exon-scaffold_145-1575043694:271963..272255TCONS_00048682-exon-scaffold_145-1575043694:271963..272255Clytia hemisphaericaexon
TCONS_00048682-exon-scaffold_145-1575043694:267430..267745TCONS_00048682-exon-scaffold_145-1575043694:267430..267745Clytia hemisphaericaexon
TCONS_00048682-exon-scaffold_145-1510915933:275772..276276TCONS_00048682-exon-scaffold_145-1510915933:275772..276276Clytia hemisphaericaexon
TCONS_00048682-exon-scaffold_145-1510915933:271963..272255TCONS_00048682-exon-scaffold_145-1510915933:271963..272255Clytia hemisphaericaexon
TCONS_00048682-exon-scaffold_145-1510915933:267430..267745TCONS_00048682-exon-scaffold_145-1510915933:267430..267745Clytia hemisphaericaexon
TCONS_00048682-exon-scaffold_145-1491911889:275772..276276TCONS_00048682-exon-scaffold_145-1491911889:275772..276276Clytia hemisphaericaexon
TCONS_00048682-exon-scaffold_145-1491911889:271963..272255TCONS_00048682-exon-scaffold_145-1491911889:271963..272255Clytia hemisphaericaexon
TCONS_00048682-exon-scaffold_145-1491911889:267430..267745TCONS_00048682-exon-scaffold_145-1491911889:267430..267745Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_145supercontigscaffold_145:267430..276276 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.1635 3.17134 4.81783 3.36654 192.345 145.028 396.992 381.934 846.157 820.044 807.306 910.174 657.792 781.468 0.471261 0.774884 0.669851 0.989485 2.60627 0.949257 1.57405 1.59831 3.00021 3.29903 828.365 985.293 0 0 1.81398 1.83423
Blast
BLAST of TCONS_00048682 vs. Swiss-Prot (Human)
Match: PPIF (Peptidyl-prolyl cis-trans isomerase F, mitochondrial OS=Homo sapiens GN=PPIF PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 9.765e-68
Identity = 107/157 (68.15%), Postives = 129/157 (82.17%), Query Frame = 2
Query:  455 YFDIAVGGQPVGRVVMNIRDDVVPKTAENFKQLCTGEKGFGYAGSTFHRIIPGFMCQXXXXXXXXXXXXKSIYGNKFPDENFQLKHTGPGILSMANAGPNTNGSQFFICTSKTQWLDGKHTVFGTVDPDSMDIIKRMEAVGSESGKCKKPVTISKSG 925
            Y D+   G+P+GRVV+ ++ DVVPKTAENF+ LCTGEKGFGY GSTFHR+IP FMCQ GDFT  +GTGGKSIYG++FPDENF LKH GPG+LSMANAGPNTNGSQFFICT KT WLDGKH VFG V  + MD++K++E+ GS+SG+  K + I+  G
Sbjct:   49 YLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVK-EGMDVVKKIESFGSKSGRTSKKIVITDCG 204          
The following BLAST results are available for this feature:
BLAST of TCONS_00048682 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPIF9.765e-6868.15Peptidyl-prolyl cis-trans isomerase F, mitochondri... [more]
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