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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048696 ID=TCONS_00048696|Name=TCONS_00048696|organism=Clytia hemisphaerica|type=transcript|length=1455bp
GTCCGAAATTGGTCCCGTAGTTACCAGGAAAAAGTCACCAAACCATCGGG
CTTTTTCATAAACATCGATGAACAAATCTGCGGAGTTTTGTTTCCTGAGG
ACAATTACAAGGTCACATATTTAACTGAAACACCTTCTTAATCATTGTGC
ACATTGTGACAGTGTGCAGCGGGAAAGTTCTCTACTGACAAAAATGCCCC
AAGATGAAGCCAATAAACCAGAAGTCCTTTTAGACCAAACTTGAAAACAA
GGATTTTGGAGTGGTTTTGGGGGTTCTTGCCCCTTAAAGTCAGCACATTT
ACACAGCCTTCGAATTTCATGTCCGGAATCGGCAGTGCCGACCTAAAAGA
CGACCAAAGGTCGTGTATGGTCGGCAGTTCACTATTGATTCTCTCGGCAG
CCGACCATACCTTGAtcttgacttacaaatataaaacaaaacatTGCCAT
AGCTATAAGCAGTTTGCTGACCTAGAGTAAGGCTCAGATCGGCATTACCG
ACCTAAAAACTGACCTAGGTCGGCAAAAAATTTGCCTCCCTTTGGCCAGA
TTCCTACCTACATTTGTAGCGTTACGTGTTGATATCAGATCTTGGACCTT
GAATAGTACTACAGTGTCCTGTAAAATTTCTTTCATCTTTTAATCAACAT
TAGCCGACACGAAATTCAAACAATTCAAAACAGCAAACAAAAGATATTAC
CTCTCTGTAGTAAAGCACGGGGAAAGCCTGTACATATTAAGGTAGAGCAG
ACTCTCCATAACTCGACCAAATGGGTTGGCACGGTGAAAATTTCCTAACA
AACTCTTGTAAAAAACTTGGAGTATTTTCTCTCTAAAACTCGAATTTTCT
GACATAGTGACTAGAATTTACAATGCCTTTAACTACACAAATGGAGTCTT
TGGTTTGATTATACCTGGGTTTTGGGCCTTACCATTCTTTCCTCAATCAA
TAAATTGTCGATGATAAAATTCCTACCAACTCGTGCTccatgaattagaa
aaaaaaattgctttcCCCTTTGGGTTTTCGAGTTATTGAGAGTCTACTGT
actttttctgcaaaaaaatggTTGTCAATACTATGTGAGCATAAAAtatg
ggtcaagctggagtttttacaagttctttgatgactctgttggtcgttaa
atgttgagacaaacgattttattactttttctaaagaacgcgtcatctct
attgtttaaaaataaccaattagttaagcatcttgtaaaaactccagctc
atcccaaaatatgcctatttttttcatttgttttcactAGAATTAATCCA
ATAAAGTTAGCCGAATTTGAATGCCGAATGGGTTTGATAGCCCCTGATTC
ATTACGAATCTGCTCTTTCCATTACTAATATATAACAAggtacacgtctt
tttttataaggaacacgtttataaggaactcgaggctgaaagtagtccaa
aaaat Run BLAST on NCBI transcript from alignment at scaffold_145:19144..20598 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048696 ID=TCONS_00048696|Name=TCONS_00048696|organism=Clytia hemisphaerica|type=transcript|length=1455bp|location=Sequence derived from alignment at scaffold_145:19144..20598 (Clytia hemisphaerica)
attttttggactactttcagcctcgagttccttataaacgtgttccttat
aaaaaaagacgtgtaccTTGTTATATATTAGTAATGGAAAGAGCAGATTC
GTAATGAATCAGGGGCTATCAAACCCATTCGGCATTCAAATTCGGCTAAC
TTTATTGGATTAATTCTagtgaaaacaaatgaaaaaaataggcatatttt
gggatgagctggagtttttacaagatgcttaactaattggttatttttaa
acaatagagatgacgcgttctttagaaaaagtaataaaatcgtttgtctc
aacatttaacgaccaacagagtcatcaaagaacttgtaaaaactccagct
tgacccataTTTTATGCTCACATAGTATTGACAAccatttttttgcagaa
aaagtACAGTAGACTCTCAATAACTCGAAAACCCAAAGGGgaaagcaatt
tttttttctaattcatggAGCACGAGTTGGTAGGAATTTTATCATCGACA
ATTTATTGATTGAGGAAAGAATGGTAAGGCCCAAAACCCAGGTATAATCA
AACCAAAGACTCCATTTGTGTAGTTAAAGGCATTGTAAATTCTAGTCACT
ATGTCAGAAAATTCGAGTTTTAGAGAGAAAATACTCCAAGTTTTTTACAA
GAGTTTGTTAGGAAATTTTCACCGTGCCAACCCATTTGGTCGAGTTATGG
AGAGTCTGCTCTACCTTAATATGTACAGGCTTTCCCCGTGCTTTACTACA
GAGAGGTAATATCTTTTGTTTGCTGTTTTGAATTGTTTGAATTTCGTGTC
GGCTAATGTTGATTAAAAGATGAAAGAAATTTTACAGGACACTGTAGTAC
TATTCAAGGTCCAAGATCTGATATCAACACGTAACGCTACAAATGTAGGT
AGGAATCTGGCCAAAGGGAGGCAAATTTTTTGCCGACCTAGGTCAGTTTT
TAGGTCGGTAATGCCGATCTGAGCCTTACTCTAGGTCAGCAAACTGCTTA
TAGCTATGGCAatgttttgttttatatttgtaagtcaagaTCAAGGTATG
GTCGGCTGCCGAGAGAATCAATAGTGAACTGCCGACCATACACGACCTTT
GGTCGTCTTTTAGGTCGGCACTGCCGATTCCGGACATGAAATTCGAAGGC
TGTGTAAATGTGCTGACTTTAAGGGGCAAGAACCCCCAAAACCACTCCAA
AATCCTTGTTTTCAAGTTTGGTCTAAAAGGACTTCTGGTTTATTGGCTTC
ATCTTGGGGCATTTTTGTCAGTAGAGAACTTTCCCGCTGCACACTGTCAC
AATGTGCACAATGATTAAGAAGGTGTTTCAGTTAAATATGTGACCTTGTA
ATTGTCCTCAGGAAACAAAACTCCGCAGATTTGTTCATCGATGTTTATGA
AAAAGCCCGATGGTTTGGTGACTTTTTCCTGGTAACTACGGGACCAATTT
CGGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048696-exon-scaffold_145-1491911889:19144..20598 | TCONS_00048696-exon-scaffold_145-1491911889:19144..20598 | Clytia hemisphaerica | exon |
| TCONS_00048696-exon-scaffold_145-1510915933:19144..20598 | TCONS_00048696-exon-scaffold_145-1510915933:19144..20598 | Clytia hemisphaerica | exon |
| TCONS_00048696-exon-scaffold_145-1575043694:19144..20598 | TCONS_00048696-exon-scaffold_145-1575043694:19144..20598 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_145 | supercontig | scaffold_145:19144..20598 . |
Blast
The following BLAST results are available for this feature:
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