TCONS_00048828 (transcript) - C. hemisphaerica

Overview
NameTCONS_00048828
Unique NameTCONS_00048828
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1075

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00048828 ID=TCONS_00048828|Name=TCONS_00048828|organism=Clytia hemisphaerica|type=transcript|length=1075bp
GtCTTACATTCTGATGACAAAACACGCTGACGTGTTGGTTTATCCAGGAA
GAAAACAGAGGAAATGCATTGTTGGATCTATTGATGATCAAATGGCCTTA
TGATTtataattttacatatttttaattCTGATATGTCAACACGCACATC
CAAAATGGCCATTTTCGAATTGAATAATCTGTAACCGAAATCGATGTCTG
TCCCGATCACCCCTTctaacgaaaaaaaatctggaagACTTGGAACGATT
ATGATCAAAGATTCCTCGACGTTAATTACAACCTAGCCAACTCTCGATCG
TCGTGTTTCTTGTAAACTCTTGGATATGTAGTGACAATAAAAACGGCGTG
TGATGGGTACAAGCTGGCTAATAACAAACAAcgatcttgctccacatttg
attCTTGAATTGTTGGAAATGTTCAAACATTATTACTTAGAAAACTAAGC
CTGAGCTAATGCACTCTCAAAGGCTGTCAGAATTCTTATgttagtacacg
ttttttataagaacaatctatataagaacataaggcttcgatggccaaaa
tgttcaaaacatgctaagaacattttaagggtttgcggactctaaaacgc
CCGATTtcgaaatggacaaaaataaactggaaattgggaaaataagaaca
tattaagaatatttttaggctttaaaaaataagattatccaaaggctcca
aaattttggatgttcttaaaaaaagaacTTGTACAGGTGTTCTTGAAAGT
TAACCTAAATAACCTAAAATTCAAAAGCATGCAAGCTATTATTTTCTAAG
ATATGAGTGACGTAGCAAAATTCGACTTGAATTCTCTATGCTAAGTGCTA
AGGTATAGACAATTTTATGATCCCTGACGACAATGACCAAATTTGTTcgt
caaatttagaaaatatggGAAGTGTTTGGATATTTTGTTATTTCTAGAAC
ANAAAATGTTGTAGATATTCAATTTGGTAAGTAAAATGacagttcttttt
tgttttttcctagCCTTTCTTGACTCTCATCGATTCTTAGGAATCAATtg
aacaaattgaaaatttactcCGAAA
Run BLAST on NCBI

transcript from alignment at scaffold_147:216730..227680+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00048828 ID=TCONS_00048828|Name=TCONS_00048828|organism=Clytia hemisphaerica|type=transcript|length=10951bp|location=Sequence derived from alignment at scaffold_147:216730..227680+ (Clytia hemisphaerica)
GGTAATTAATTAGATATTTACATTTTAGTGTGGTGAACTGTAATTAGCCG
TTATCGTAAAAGATTTGTCGTGTCTTTCTTTCGATTCTGTACTTTGATCA
TATCAGTGTTTCGATATTCTTAAATTCGAGCCTGCACTTGATGGTCAATC
TATCTCTCATCCGTGTTTAGGTTTGAGGCATGACATTCCgctctcttttt
ctctcttcttttttcgttttagtCTTACATTCTGATGACAAAACACGCTG
ACGTGTTGGTTTATCCAGGTAAGACGTATATTACCTTTAATATCATGATA
TAAATAGCTCAATCTCATCTGACATTTAGTTTCATGATGACGTAATTTCT
ATGGCGTTCTAAATGGTCTGTGTAGATACGTGATTCTGCATTAAAAGCTA
GTTGTAAGTTTACTAACGACGTACGTAAGTGCGTGGAGACAggaatgact
tttttcaaattggtTAATCTAAGgatatttttaagaatatttaccGGGAT
TTTataatctcagacataatggaTACTAAAGCTGTGGATAGACAAGAGAT
TTAAAATAGAGGGCGGTAGTTTATTAGTTAATCTTTCTACTTTCTATCTC
CTTCTCAGGAAGAAAACAGAGGAAATGCATTGTTGGATCTATTGATGATC
AAATGGCCTTATGATTtataattttacatatttttaattgtatgtatttc
aaagattgtttgtAAGACCacgttcagacgttacggttccgtattGTTCC
AAAAAGAAACGGTTCTGTGTGAACGTGTGAACACCAAAATTTGAAGACGT
TAcatacaaagcaaaacagatcgaaacggttttgttccactattttcatc
ggaacggaacggaactgctccggaACGTttcgaaaccaatatgaacactc
tctATCCCTAACGGAAACTATACCGGGACGATATGACATGAAACTGTAAC
GTCTGAACTGGTTTGAGCATGGTCTAAATTATTGTTAATCAATAAAAAAA
GGTTGTTCCAGTCTCTTCTTTTGAGCAACACGCACGTTGTCCCCAGCCAT
CCAAACATTGTGTATGTACGCAATGGTTACTTGTACAAGAATGGTGGTGG
TACACTAAATAGATTGAACAAAAAATTCGGCATATAGTGTGTCGTTACAA
AACGAAAACCCAGGTAATATATAGCGTCCAGTTGACAAAGTTACTCACTC
AGCTCAGACAAATTGAAcgttaattaaaaatttaaagaaacaCGATTTTC
AGGTAGGTAAAAGTGGAAAAACCTACCTAGATAACTTTAATACCCCAGGG
CAGAATAGTTTTCTACTGGGCACTTTGAAAGCCTACCTTAGTGAAGTTTG
CGTTGATAAAGAATCATTGATGAAACAtctctattatttgtcttcgtCGT
TTCGTCGTTTTACCGTCGTTTATCACccataaataaaaagaaaagaaaag
cgTTAATCCGTTAACTTCTCCCAAGAACATCAAAGCCCGAACTCACATTG
TTTGACCCACCAAAGAATTGGTTTGACGAGAAAGGCCGGTCTGCACTTTT
GCATGCGTTtctcgatcgcactttttcgagtgcgcgttacatttttatga
cgtaatcttttttccaagccaaaaggattgaagccaaaaaatatgcgatc
gcagcgcgcggaGAAGTGGAGACTGGCCTTGAGAGAGTAATTAGAGTATT
TCGTCAAAAATGCCGCGCACCCAACTACAGGCCGGGCGTCGGGCGGTAGC
AAAAAGAACCCGTTTTTCCGCCCTCGGGAAATCGCCACCCGCCCGTTACA
TGTCGGGTGTTGTTAAGAGCGCCCAAGATGTAGCACCCGACAAagtgcac
ccgactgtcgggtgttgAAATTTCTAACTTCGAACACCCGAcaacagcac
ccgactgtcgggtgcaccggcagggtcgtGCAAAGCTTGGCTGGATATGT
TTGATTCTTGGAGGTGGACAGTTGTGTGACAGTTGGCACAGCCGGCCGAG
CTGGGGATTTTAACGTTAGGTACTATATCCCTTCTAACACCTTCCAAACA
TAGATGATGATATAGTGTTCCCTTCTCCTTTGAAGGAAATAGATTTTGGA
CTGCTTGAGACACACTCCCAATAATAGACCTGTTTTTACATTTCACTAAA
TGACGAcccattttccctttcctatctttcGCTTTAcctgttttttctat
tttctgagacttagtttctcatttctgagaAAGACGAGAGAcggagtttt
catacctgtcaatcatttgtccatcaatttcgaccagtctaatccTCTGG
ATTGGAGGTGATTTCAACTTTCCGGACATTGACTGGGAGACACACACTAT
AACTGGATATCAATACTctaaagaaatttataaaatagCTCTAGACTGGA
TCACAGAAAGTGGCTTATCACAGCTAGTGAACTTTCCAACAAGAGGAGAC
AATTGCTTagatattttattgaaaaacaataaCTCACTCTTAACACACAT
TGTTGATACCCCGGGCATAAGCGATCATACAAGCATCCCTCTTGCAGACA
CATTGTGCCATCCTTCTCgactaaaaacatcaaaacggACAATTTACCTT
TGGAAAAGAGCCAACCTACCAGATATAAAAGCAACCCTGACTGAAGATGT
TAAACAATTTTGTGATTCGAACCTTGATAATGTGTCTTCCATCAACGATC
AATGGACACAGCTAGAAACAATTTTCAATACAGCTCTTGATAAGATCCCA
ACCAAACAGCTTTCCCAACGTTACAATCAACCTTGGATAACCACAGAGTG
CAAACGATTATCAAGACGTAAGAAACGTCTCTACAAACGAGCTAAACGAA
CAAGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNctgcatgaatcccatggctgcaaataaattt
atgcacataatgacatgcataatttcaagatgctaccccagcagtgataa
attaatttagaatggcagcgtggaccataaaatatagacagtgtggtgga
aagtctgttagacagaaagtgcaaagtgaattttggagaaaaaaaaatat
caaaacaaaactttcaacccaAAANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaatatccgcat
aatcatcctcagatgagaatgcagacgatctaggtaaaccagaccgtaaa
cataagaaatatcaaaatcaaaaaaaaggtttacgggctggatatccagg
ctagaaaCGTCTCTACAAACAAGCTAAACGAACAAGACTGTATACTGACT
GGAATAGATACAaagcaattttaaaagaatgcaAACAAGCATGTCGATCA
GCCCATGACAACTACGTTAGAGATAAGATTATTGGCTCATCTCATCATCT
CATTtattagatttttcaaaaactctGCTGATCTCAGAGTTTTAGTCAGC
TGGCTTAatgccaacaaaatttctttgaatgctagcaaaactgagtttgt
tattttttgttcccCTTGGAGACAGATGGACTTATTCCAAGAATTAAGCT
TTGCGGGAAAATTCTATCACCAAGTAAGAGTGTGAAGTATTTGGGTGTTC
ACCTTGACAATTATCTAAACTGGAAGGTTCATACTTCTTTCGTTGCTGCT
ACATTTAGAATGGCAAGTGGGGCAATATCCAAACTTTGTCACTATGTTCC
AATTCACAtccttctaaacatttatcatgcaatttttgcttCTCATGTTC
GCTATGCTAGTCAACTCTGGGGACTGTCACACATAGGATTCTACTCTTCA
AAAACACTGCACTAAGACTCATGACCTTTAGTGAGCCAAGAACTTCTGCT
ACTCCCCTGTTTGATGAgcttaaattactcaaaatctttgatctggtgaa
agtaatgaatatcttatttattcaaaaatacctacagggtaatcttccat
ctgatgtcctatcaacacttaattttgatgaaattgatcacaaaactGGC
ACCAGGGGCAAAGCTGATTTTTACAACcttgatactgatgaactaaaatc
tttagctacaaaattctatttagacaaatacaaagctgaagacgaataat
ctttgtgtgtgtgtgtgtNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTTTATAGATAAATCTACTCAAAGAAAttgtcataaaa
taaaagtaaaaatatttcttatattcactattttgttgtcactattaata
ttatgataatcatttattcattttttctttcgttctgtaataatttttca
gtttcttctaggttccccattgtatagagaaatctattttttttttgtaa
ggggttatcctgctgtgttgcagcgaaaatatatccaattcaattcaatt
catccAACTCCAAGAAGCTCTACAAATACATCAAAAGTAAGAGCTCTGAT
AATATCTCTGTTGCTCCTCTCAAGAAAGGATAACAAAGAGTAACAAAGTA
AGAAGTTCACCTGAGAGCTATCATCCAATATCGCTCACATCAATCTGTTG
CAAAGTAATGGAgcataccgggtgacccacgaaaaagttcataCATTTTT
CTTGAGGctgaacaaatgtcccaaagtgcttggagttttgatttagaaag
tagatatcctaacttaaaaattgagctatcactttttaaatttgaccaac
ttgttctctacttatgagttTTTacagtcaaaattcactttttggaaagt
gtaaaaaaacatGACCATATCTCAAGAGGTCTTAcagtcaactgctctaa
cttgagactatctgacaaaatgtgggacggcaattcagccaccatttcac
cgaacctacaaagtcatttgatttgagtgctctaacttgggactatctga
caaaatgtgggacagcaattcagccaccatttcaccgaacctacaaagtc
atttgatttgagttaatgaacggtgtATTGTGataaatacacaatttctc
tttcgcaccaagtacgcttttaaatcgaaatatgaaaaaaatccatagtg
gaacacacgcgaatgtcttgaacaaagaagaccatattttagtggcaaaa
caatggagTGTTTGATGTCACTCTCGCAGCAAGATacacactcgctattt
gttaatcccatcgagcgataggcggttaggcagcgggCGTTATCTAATCC
TCCAATCGttgtccggtcattttgaatgaaaacaaaaaagttaaaaaggg
cacgGTGcgttatcagtgaaagttaGTGTGACATGTTattacagaaagta
tgattgatcaacttggtggagttatcaaaacaaatttgttgtcaaagaga
tttaacagtaagtgaaaatacaggccagatatcaacagtcccatgtttcg
tcCCAAGTTTGAGCAGTTGTTGGTATGTCGTTAAGTTTCATATTATTGTC
GTCTAAAGTAAAACTATGTAAACTCTGTAAAACTCTGTAAACTCTGCATG
TACTCTGctctctttttttgtttttgtttttttaacccggggttaaaatc
atttttcagtCTTTTCCACCCAGGGGGTCGTAATGNTAACCCAGGggtta
aaatcatttttcagccttatccACCCAGGGGGTCGTAATAAGTAGTAATC
AATAGATAATTGATTAATTAAATATCAATTACAATTGATAATCAATAGAT
GATTAAGGtctaaaaaattgtgagtatcgaTGATCTattattataatgta
acaaagttctaggcgcacgagggcctctggaactgatcgtgattatcttt
caaaaaatttattcgGCCAGCCCTTAGTGGTAGACATTGTCCCAAAAAGT
ATACGTGGGCATCTCCAGCAGGAAAACCCAAAGAAAGCTCTTGTTTTGTC
ATTTCACGGATGGCGTGGATCGGGAAAGGGTTTTGTAGCTGATATAATAG
CAGAGCATATATACAGAAAAGGTACACAGAGTATATTCTATACAAAATAT
ATATCTGGGAATGAATTCACACATAAACAGAAGCTTGAACAATAGGGAGA
GAGTGAAAGGAGAGATTATTAGTGCAACCAAAGTTTGTGAACgttcaata
tttattttcgatgaaattgaaaaaaatgcctACAGGATTGATTGATATTT
TGAAAGCTTACATTGATTTTCATCAGAATGTGGATGGTATTGATTatcgt
aaaaatattttcattttaatggGGAACACTGGTGGTGATGAGATAAACAG
GGAAGTATATGAACATTTCAAATCAGGAAAATCAAGACGGGAAATTACTG
CCAAGCAAATGGAATACATATTATCTAATGATGCATTCAATAATAAAGGT
GGTTTAAATGATGCAAATATTTTGCTTTCAGGATTAATAGACTATTACGT
TCCTTTCTTACCTTTAGAAAGAGAACACTTGAAACAGTGTGTACGAGCAG
AGTTAAGACGAAGAAATAAGGCTTCAAATGAAGAAGTTGTTAATAATGTA
GCCGATGATATGTTTTATTTCCCTGCAAAGAAACCACTATTTGCAGAACA
TGGATGTAAACAGGTTAATAAAAAGCTGGATAAATACATTGATTACTAAG
TATCTTTAAACTGATTTTGGATGGATCATAACATTTCAGTCATTTATACT
GTATTTTAAGgttcaaaacttttggaaacTGAATTTATCAACGCATCACA
TTTCAATATAATACAAACACACGCTCATACAAACATGGAATCACTATTTC
ATAATAATTACTGAGTAAGAAAAGCATAAACATTTGACACAACACACTTC
CCTTCATGCAGACAAACAGCTTTTAATTCCTTCATAGGAGCTGATATCTT
ATTGGATTTGTAATTTTACTGGAGTTGTCTTTTAAAAATGTGTATGTTGG
ATGTTAATGGTTATAACACTGTGTCGTCAAACCAGAAAATTGTCGTTTct
aaaaatttaggaaaaatgCATCCATTTGTTTCTATACTACTGTGAAAAGT
CGGCACAGAATAAAGGAAGTCTAATCGACTCCTATTTATTTTACTGCTTC
TGAAAATCGAAGAAGATCAGCCTAAGAATACGTGATTTAAGACTCGGATT
TAAGTTATACTTTTGACGGATGTTCAGCTTGAATAATTGTCTTAAGAAAT
TAACCTGAATAGACATTAAAAGTGAAGGTACTTTCTCATAGAAATATGCA
AATCTGACTCTCATACTTTTTTTAAGTCATAAttccaataaaaaaagtag
CGGATTGAAGATTCGTTAACTTTTTTAGAAAGAGTGAACACTGTGCTATT
TGGTGTAATTCTTTTCTGATTTAAATAGATAAAAAAGATAAAGCTTTACT
AATAATTCACAAATAAAGAATTATGTTGAAGAAAGTACTAAAATTTTAGA
GTATAAtatgatcaaaatttttcaccatAACTCAAAGATATTCAGGAGTG
AAATCTaccaaagtttgaaagtaagataaaatgaaattcttagAGGtgaa
aaattcggaattccgaaaattcaaaagtttaggaAACATTATAATTagaa
aaattcggaattccgaaaaattggaaatattcaGAATTTCGAAAAGTCAG
AAGCattcggaattccgaaaaaatagtaaaaattcggaattccgaaaaat
aaaaagattagaaatttcgaaaaaatcataaaaattcggaattccgaaaa
ataaaaagattagaaattttgaaaaaatcataaaaattcggaattccgaa
aaatcataaaaactcggaattccgaaaaaaatgGAAACTGAAAGTGATTT
AAATTAACAAGATTCAGATTAAGACGATGTAACTGCAGCAATACCAATAT
TACTGCTGATAGTTAGGGTATTTACAAAGTATTATCTGATGTGATATATA
GGTTGTTGTACTTGAAAGGAGTCTCTTTGAATTCTTCGTGTATTACTTTC
TTAAATCCTGTAATTTGCTTTTGGTCTTCATTGAAATCTTTCCAATAATT
CACATTAGTCAGCATTTTCTTCAATACTCGTTCAGATGGTGCTTTTATAG
CACAGTTTTGTCAGCGCTATTCAGCTGTGAACGTGCGCATGTCCCAACAT
TTACCTTAAAAAATAAAGAGTTATGTTTCACTTGTACAGTTTCACATCCT
TCTAGCATTCAATAGTTTTGTGTGCAATCAAAAagctctcaaaataaaat
aaaacgtcCAGCATTTGCTGTTTGCGCTGCATTCtgaattcttttaaaat
tactAAGGTGTTATAAATATATGCAGTGTGACGAGAAAACTTACAGCATT
CATATCTGTTCGTCATCGGCTTGCCATCTCTGGTGtttgttattatttat
tttcttgatGGTGGGACAGTGCTTCAGTCGAAGCTCCAGATGGAACTCTG
ATTGATAGCATTGTAGCATTGCATATCTGATTGTTTTTTCGATAAAAACA
CAGCTCTGACTACCTCGATGTCATTAAAAAGGCTGAATCCACGAGAGCAG
ACTTTTTAAACATGCTGGCGCTCTAACCCGCTCTGATATCATATCTTCTT
TTGCTTATACTTTTATACGTTCAGTATTTCAGCAACTTTTTTCGTAAATG
AAGCCTCATGATTTAAATCATATCTTCTGTTTTtcgagaaagaaaagaaa
aaaaaatttgtcaccTATGATACTTTGAAGTATTTCggaatgattttaaa
attcaattaaaCTAATTGGTTTCTTCGCACAAGCTAATCTTTTCGTGATT
CATTGTATTCTTTTGCGAAGGCGTCAAAAATTTCGTTAACAGAGCCTTTT
GTTATTAATAAAGAATTTTTAGTTACCCCCTGCCAGTTTGAACTTATATA
CACATAATAGCTGAGAGGATGATAAAAACAGGGGGTTATTgagaattata
tttttaatcaaCTGAAAAAAGAGCTCTTGCTTATCACTATCAGCCACGAA
ACATTGTTGTGTAGTTGTGATatgaaaatgaatttcaagaaaaGATAGCA
TTTTAGCatttataatttatttcatATATTCATCTTTTCTAAAGTACTTG
TGGTTGTACCGGTTCgtaaatttgaaaagattttgtcaagaAAAACCTGA
TTTCTCTGTTGTaattcataaaaagtttttaatcgagATTTGCAATATAT
TTCTTTGAAGAATTTTGACAAACCATGTTCTGACTTTGTTAACTTTTTCT
TTGCATTGGCATGATTGCTTGATTGCTGTGTAAAATTGCGTACCCAAACA
CATCGAGGAAATACATTGTCAAATTTCTTCTGACATTTTGGATACAGCAT
GAAGTGCAGTGCCACAAATACTAATCATTTGATAATACTCTTTTTTCGTT
ACAGCTGATATGTCAACACGCACATCCAAAATGGCCATTTTCGAATTGAA
TAATCTGTAACCGAAATCGATGTCTGTCCCGATCACCCCTTctaacgaaa
aaaaatctggaagACTTGGAACGATTATGATCAAAGATTCCTCGACGTTA
ATTACAACCTAGCCAACTCTCGATCGTCGTGTTTCTTGTAAACTCTTGGA
TATGTAGTGACAATAAAAACGGCGTGTGATGGGTACAAGCTGGCTAATAA
CAAACAAcgatcttgctccacatttgattCTTGAATTGTTGGAAATGTTC
AAACATTATTACTTAGAAAACTAAGCCTGAGCTAATGCACTCTCAAAGGC
TGTCAGAATTCTTATgttagtacacgttttttataagaacaatctatata
agaacataaggcttcgatggccaaaatgttcaaaacatgctaagaacatt
ttaagggtttgcggactctaaaacgcCCGATTtcgaaatggacaaaaata
aactggaaattgggaaaataagaacatattaagaatatttttaggcttta
aaaaataagattatccaaaggctccaaaattttggatgttcttaaaaaaa
gaacTTGTACAGGTGTTCTTGAAAGTTAACCTAAATAACCTAAAATTCAA
AAGCATGCAAGCTATTATTTTCTAAGATATGAGTGACGTAGCAAAATTCG
ACTTGAATTCTCTATGCTAAGTGCTAAGGTATAGACAATTTTATGATCCC
TGACGACAATGACCAAATTTGTTcgtcaaatttagaaaatatggGAAGTG
TTTGGATATTTTGTTATTTCTAGAACANAAAATGTTGTAGATATTCAATT
TGGTAAGTAAAATGacagttcttttttgttttttcctagCCTTTCTTGAC
TCTCATCGATTCTTAGGAATCAATtgaacaaattgaaaatttactcCGAA
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031038XLOC_031038Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00048828-exon-scaffold_147-1491911889:216730..216730TCONS_00048828-exon-scaffold_147-1491911889:216730..216730Clytia hemisphaericaexon
TCONS_00048828-exon-scaffold_147-1510915933:216730..216730TCONS_00048828-exon-scaffold_147-1510915933:216730..216730Clytia hemisphaericaexon
TCONS_00048828-exon-scaffold_147-1575043694:216730..216730TCONS_00048828-exon-scaffold_147-1575043694:216730..216730Clytia hemisphaericaexon
TCONS_00048828-exon-scaffold_147-1491911889:216952..216997TCONS_00048828-exon-scaffold_147-1491911889:216952..216997Clytia hemisphaericaexon
TCONS_00048828-exon-scaffold_147-1510915933:216952..216997TCONS_00048828-exon-scaffold_147-1510915933:216952..216997Clytia hemisphaericaexon
TCONS_00048828-exon-scaffold_147-1575043694:216952..216997TCONS_00048828-exon-scaffold_147-1575043694:216952..216997Clytia hemisphaericaexon
TCONS_00048828-exon-scaffold_147-1491911889:217338..217418TCONS_00048828-exon-scaffold_147-1491911889:217338..217418Clytia hemisphaericaexon
TCONS_00048828-exon-scaffold_147-1510915933:217338..217418TCONS_00048828-exon-scaffold_147-1510915933:217338..217418Clytia hemisphaericaexon
TCONS_00048828-exon-scaffold_147-1575043694:217338..217418TCONS_00048828-exon-scaffold_147-1575043694:217338..217418Clytia hemisphaericaexon
TCONS_00048828-exon-scaffold_147-1491911889:226734..227680TCONS_00048828-exon-scaffold_147-1491911889:226734..227680Clytia hemisphaericaexon
TCONS_00048828-exon-scaffold_147-1510915933:226734..227680TCONS_00048828-exon-scaffold_147-1510915933:226734..227680Clytia hemisphaericaexon
TCONS_00048828-exon-scaffold_147-1575043694:226734..227680TCONS_00048828-exon-scaffold_147-1575043694:226734..227680Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_147supercontigscaffold_147:216730..227680 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.37691	1.19384	0.204371	1.10753	24.0762	16.2486	16.3742	22.1964	11.2935	11.4191	8.55763	7.51769	2.31371	2.0348	1.31706	1.02838	5.53412	4.65152	2.57517	3.43099	3.2544	3.24719	1.66152	1.79815	2.31417	3.9773	4.54443	5.15251	3.6852	3.08992
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00048828 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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