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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049035 ID=TCONS_00049035|Name=TCONS_00049035|organism=Clytia hemisphaerica|type=transcript|length=2185bp
TCTCGAATAACTGTATCGTTATGGAGGCTTTAGACTTTTCTTGCGAAAAc
aaatttattagtttttctGTTATCCTAATTTTTATATATTACCTGATTAA
TTTCATTGTGGATCATTGGATTTCAACCGAAGAgaagaaaaatgttttgg
tgACAGGCTGTGATTCAGGTTTTGGTTTCCAAACAGCTTTAGAATTAAGT
GaatctaattgtaaagtttttgctGGTTGTTTAACTCAAGATGGTGTCAA
ACGACTTGAGAGCAATGCCAGGTTTCGAGGGATGGCTTTTATCATGGACG
TGACTAAAGACGAGGATGTTCAGAAAGCAAAGGAGGTCATTGAAGAGAAT
GGAGCTTTGGACGGTATAGTTAACAATGCTGGTATCGCTATTCATGGATT
GATCGAATGGCAATCTATCGAATTGATGAAGAAAACATTCGAAGTGAATT
ATTGGGGAACTGTTCGTGTTACCAAAGTCATGCTACCATTATTGAAAAAG
TCACGGGGTCGTATCGTCAATGTGACAAGCATGGGAGgaagATTATCTGT
GCCTTATGGAGCTCCCTACTTCAGTTCAAAGTATGCAGCTGAGGCGTTTT
CTGATAGCTTACGTCTCGAAGTCAAACCATGGGGTGTTTCTGTGCATTTA
ATCGAACCCACGTACTACAAAACTAATTTGGCTGGTACAAAAGAGCTAAA
GAAAGTTTGGTTTAATATTTGGGATCAACTACCACAAGAAACACATGATG
AATTTGGAAAAGAACCTTTCGAGAATTTTGTGGATGGTGTTTTGAAAAGT
ATAAAGTATGGCGATGACATATCAGAGGTTTCTGGCAAAATCAGACATGC
AATGTTGGCACGTTTTCCAAGAAGACGTTACATTGTAGGGAAAGATTCGA
TTGTTTTTGCCATTATAACGCATCTTCCGACAGTTGTTGGTGATTGGATT
TTCTCGAATATGGCACCTTTGCTTCGACCAAAGAAAACAGTGGAGTAGTG
GAATTTGTATGTATTTGAAGAACAAGTATTACTATACAAACTtggatatt
ttttatgaaacaaaTATACAGGGGTGTACGAATTCTGATTTGTTCATCAC
AGTACACAGCCGCTGGTCTCCCGAGGGAAACTCAATACTAGAACCTCCGT
AACTCAAACACTTTTCGTGACTTTTCTTAGCAGCTTGAtaatcttttata
agaaaagaatatgtttatagccTTTTTTGCCTattctacacaatagacag
cccCAGGCTTTTACGCTCGAagcgaaggaagatatgacgtagcctacttT
GCCATTTTGTAAGACTAACTACCGTGAGCACTAAAGTTGAGCTATCTCTG
AAACTTAACCTATGACGACGGATTATAAGAATTTCATCGCGCATGTCTCA
ATCATGTAAAATTATAAATCTTGTCACTAGGACGATTTTTTGCGTTTGAG
tttatagaaaatttcaaatgaatCTTATGAAAATTTAGGTAATTGTATTT
TATATCTCATATATTGATCTAGTTCTTATTATCTTGTAGTTAGTTAGATT
TTAAATACTTAGcttataatttcaataaaatcattaaCGTGTGTCACATT
TAAAACTTCGACTatttaaaaagtttgttttaTAACCATTTGATAGAGGA
CTAATCTGGCCACCATGAAATATATTCACGTTTCAAGCACCCCTTTCAAT
CCAATCAAATTGTATTTTCATCTGAGGGCAGTCTCTTCTCTGTCAAAATT
TGTTCCCCAAGCGAGAAATTAATACCTATTAGTCTTTAAGGCACAAAGGT
TTAAGGTGTACAAAAATAGGAAGAAGTATTCTTTAAAGGTATATAAAAAA
TGATCAGTGGATATGGCATGTATTTCAACAATTGTTCTGaagattatttt
gaaatgtatttgACTAGTTATACAGTGCATGTATTTAAGGTAAGAAAGCT
TTGCTGAAGTACAGTGATTAACGatgtaataatgataatttATTGGCTAG
AATGAGTTTGACGCACTAAATACAGGCTCATGGCCCTAGGCCAATTAGTT
CTTTATGAGATTTTAGgtccaaaaaatcttttttagcaAATATTTTGACG
ATTTGATACGAAAACTTGTACATCCGCCCCAGCTTTGACAGCCAATAAAA
TTGGaggaaaaacagcttttaacAACATCGATTAT Run BLAST on NCBI transcript from alignment at scaffold_15:496993..508167- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049035 ID=TCONS_00049035|Name=TCONS_00049035|organism=Clytia hemisphaerica|type=transcript|length=11175bp|location=Sequence derived from alignment at scaffold_15:496993..508167- (Clytia hemisphaerica)
TCTCGAATAACTGTATCGTTATGGAGGCTTTAGACTTTTCTTGCGAAAAC
AAATTTATTAGTTTTTCTGTTATCCTAATTTTTATATATTACCTGATTAA
TTTCATTGTGGATCATTGGATTTCAACCGAAGAGAAGAAAAATGTTTTGG
TGACAGGCTGTGATTCAGGTTTTGGTTTCCAAACAGCTTTAGAATTAAGT
GAATCTAATTGTAAAGTTTTTGCTGGTTGTTTAACTCAAGATGGTGTCAA
ACGACTTGAGAGCAATGCCAGGTTTCGAGGGATGGCTTTTATCATGGACG
TGACTAAAGACGAGGATGTTCAGAAAGCAAAGGAGGTCATTGAAGAGAAT
GGAGGTATAAGACTTTTTTTTATTTAAGTGTTTCGTCAATTGATACTTAA
CATCCGCTTATAGCTATCCGTCTGACTGTATGTCTCGTGTTTTACTAGGT
TATCAAAGATTTGGGTATATCAAGGGCAGTAGCATGGTGGCAGGGGGCAG
TCCCTCCCCAGCGGCCGATTTTTTGGGGGGGTGCCAAAATACAAAGGGCG
CAAAAAGGTACCTCTGATTACTAATATCGGCGCCCATTTCATGGCCCCCG
TCACCGGGGGGGCCAGGGGGNCGAAAGGTATGTACCCCTTCTAAAATGTC
ATATTTTTAACTGGTCCAAAAATTAATCTTTAAAACAAAATTTTCCTAAG
TTTTCCTTTAATATCGAATTCCAAAATACTTTTTGAAATAATTTCTACGT
AATATAGATAATTATTGAATTGAATTAACTCGTAATTTGCAAAGCTTTTC
CATACTTAGAACTTAGAGCTCCAAGTAACCAAACTGTTACAGAATTGTGT
TCTCATATGTTAAACTAATAGAAATATTTACTCCTGTTTATTTTAGCACG
CAATCTGTATTTTGTCATTATTGTATGGTGCAGGAGAGAAAGGGAAACCT
GAAGGACCAGGGATCCAAAGAGGACGCATACATTACAAAAGGATTCTCGT
CGTGGAAAAAGGCACCGAAATGCTTTCAGGCTCACCAAGATTCAGCATGT
CATAAAACAGCACAAACGTACCAACTAACGATTCCCAAATGCTTAGACGT
CGAAGAAATGATTGACAACCAACTGACCGAAAAACGTACCGTCGAACGAA
AATACCTTCTTCAAGTAATCAGATGCTTACGGTATTTGGCAAGGCAAGGG
ATCGCATTGCAAGGTGACGACGGTAACGATAACTTTACACAACTGCTACA
CCTTGTCGGCATAAGTGATGAGAATCTCATGAAGCACCTGGATGGGAAAA
TAGGTAGCAAATACACGCATAGTGATGTTCAGAATGAACAGAATNGTGAC
GACGGTAACGATAACTTTACACAACTGCTACACCTTGTCGGCATAAGTGA
TGAGAATCTCATGAAGCACCTGGATGGGAAAATAGGTAGCAAATACACGC
ATAGTGATGTTCAGAATGAATTACTTAACATCATGGCGACTCTAACATTA
CTGGAGAAACTTAAAGATATTGACGAGCGACGGTTTTTCTCCATGATTGC
AGATGAGGGCACTGACATTAGCAATAAAGAGCAGTTATCCTTTTGCTTAC
GTACCGTTGACGAAAACTTAGAGGCTTATGAAGACTTTATTGGGTTTCAT
CAGTTGGAAAATATTAAAAGTGATGTCATAGTTCGCGTTATCAAAGATAT
CCTTCTAAGGTTAAATCTGTCTTTGGAGAATTGCCGAGGTCAGACGTACG
ACGGAGCTTCGAATATGATGGGTAGAAAATCTGGTGTGTCAACACAGATA
TTAGCCGAGCAACCAAAAGCCGTTGCGATTCATTGCGAGGGGCATTCTTT
AAGTCTAAGCATAAAATCATTGACAAGTGAATGTGACACTCTCAAGGATA
CTTTGAGTGTTGTGAAGGAGATATGTGTACTCGTGAAATATTCCCCTAAA
AGAGAAAACCTTCTTGGAAACATCCACGAAAGCATCGAAAAAAGCGGAGA
AGATTTCGAACCCATGAAGAAGTTGACAAAATTATCGACAACACGCTGGA
CAGTCCGAGCCGAATGTATGAAGAGAATTATCGATAATTACGAATCGCTG
TTATTACTCTGGGACGAATGCTTGAAAGAAAAACTGGACCAAGAAACCAA
AGCCAGGATAATCGGTTGCAAGAGTCAAATGAGATCATTCAATTTCTACT
TCGGCTTAACTCTGTCCCACACGCTGTACAACATGACAGATAATCTCTCC
AGGAGTCTTCAAGGTGAAAAGATGTCAGCCCTTTCGGGAAGAAAATCGGC
CGAATTGGTTATTGAAACCATTTCGAAAATGAGAGCTGATGAAGAATTCG
TGGCTTTCTATGAAACCACCACTAAGGATGCAGAAGCGTTAAAGAAAGTG
TGCGAACCAAAGCTACCAAGAAAACGAAAGAAACCTAAAAACTACTCCAT
CTTGCAGTATGTCACGCGTCCTGACAATGAGAAGGAAAGTGAAGCTTACT
ACTCCAAAACTCCAGAGGAACACTACCACCTCATCTATAACGCAGCCATT
GATATTTTGGTCAATGTTATGCAAGACCGTTTCAACCAGCCAGCTTTGAA
AAAATTTGAAAATGTCGAGCAGCTTCTTTTAAAAGCAATCAAAAGTCAAA
ATTTTTCTGATGAGTTGGAAGTTATGAAAAAAGATTTCGAAGGAGATTTC
GACGAGAACCAAATCGAAAGCGAATTGAGACTCATCAAAACCATATTCGA
AGGATCGGAACCAATCAATTTTCGTGATATTTGTAAAACATTACGCACGG
TTGATAGAGGGATTCGTCCTATGATCAAAAACATTTGGACAGTTGTGCGA
ATCGTTCTTACAAGTGGAGCAACATCTGCCACACCAGAACGCTCTTTTTC
GATGCAGAGAAGAATAAAAACGTGGCTCAGATCGACAATGGGCCAAAGAC
GCTACAACTCCTTAGCTATCCTTAATTCTCATAAGAAAATTGTTGATAAG
CTGTCACTCATAGAAGTGGCGAAAAGGTTCACGGAATGCCAGGAAAAACG
CCAGAATGAATTTGGAACATTTAGAGAAAGTGATTTGTAGCCGATTCCTT
TTTTACGATTTATGATATATACTAGGATAATTTTTGTGTTTACTTTAGGA
TGTTGTCATTATAGAAATGAAAAAGATATCTTTGAAAGATGAATCATAAT
TGTACTTACATTGACTTAAGTATACCGTTTTAGGGGCAAAATAAGGGTTA
AAAACGAAAAATTTTCTTCGTCGCCCAACCATGGTGGGCGACATTTTAAA
ATTTTTTTGGCCCCCCCACTTTTTTTTGCACGCCGGGGGCCATGCATTTG
CTTAGAATTTGCAGTTTTCGGTCAAAANTTACTAATATCGGCGCCCATTT
GCTTTTTTACACCTTACAATTTGCAGTTTTCGGTCAAAAATATTAGTACA
ATAAGGCTCCAAAATATCTAAAAATTGAATAAAAGAACAAAGCTCTAAGC
CTGGGATGAACGAGTTTTAAGCAAATTACGCAAGGTATACTTTAGGCGTA
CAAACTTTCGCAAACAGAAACTTTCGCGGTTTTCGTGAATTTTACCCTTT
ATCGCGAAAGTAAAAGTTTTCGAAAATTCTTGAAAGGGCTATCCGCGGAA
GTTACTAGAAAAGTACTCTTTTAACCTGCTAACGCTTCATAAGTCAAAAA
GACAAAAGTTTCAATCCAATTTGTAAGCAATTTTTTCATGTGAAAATTTT
CATTTTTGTCTTGATTCGTGAAAGTTTATTCATGCTCGCGAAAGATATTC
TCGTCGAGTTCGCGAAAGTAAATGTTGGAAATTTCGCGATTTTCCGACCT
CGCGAAGGTTTCTGCTCGGGAAAGTTTGCATGCCTAAAGTACCATAGTCA
TTGTACCATAAATTGTAAAATCCACCTTGTAGATAAATAAGAACAAGGTA
AAGAACATAGTAAAGCTTAGTGTGCTGAAAAATGAGAACGGCCGAGCTTT
AAACGATTCTAATTATAGAACTTCAATTAGAATGTTATCTCCTTAATATT
CAGCCACCAAAAATGAAAATTAAAAATGGTAACTCAAGCTGCAAGATTTA
GTTATACTGTGAATCTTCCTATATTTTCTACAGCTTTGGACGGTATAGTT
AACAATGCTGGTATCGCTATTCATGGATTGATCGAATGGCAATCTATCGA
ATTGATGAAGAAAACATTCGAAGTGAATTATTGGGGAACTGTTCGTGTTA
CCAAAGTCATGCTACCATTATTGAAAAAGTCACGGGGTCGTATCGTCAAT
GTGACAAGCATGGGAGGTGTGTTGTTTTTACATATAGAACTGCAAACTGT
TTCATCTATCTTTTTGTGATCCATTGCGAAAATGAATGGTTTTTTCAAAA
ACATGAACCCATGATCAGAAAATAGTTTTCTTCTAACTTTTGTCTTTTTA
AAAATAGATTTCATGGCTGGATAGCAGGATGGCGGGATGGCGGGATTGCG
GTAATGGTATTACAACCAAAAATGAATAACCTACTTTTCTCGCCTTTCTC
TATTAAGAATAGCTTTTCATGACTTCAGATTCTCAATAAAGACTTTTATT
TGAAACTACAGTTGCACTCTCTAATTCGACGTTCTATTATTCGATACGCT
CCATTAATTCGATAATATTGAAAGTCACCGTCAACAAGAAACTCTCATAA
ATGCCGATCTATTTGAAAATCGAATTAGATAGCGTCAACTGTAATCTGCT
TTTTCTTCGCTAACAAGCCTTTCATGTTACCCTCTCGATAATCATCATTT
ACATGTGTGATTCTATTTTGATAGGACGACTCTCACCACCCTACACTGCC
CCTTATTACGGTTCAAAATATGCAGCTGAAGCGTTTTCTGATAGCTTACG
TCTCGAAGTCAAACCATGGGGTGTTTCAGTACATATTATCGAACCCACGT
TCTATGCTACTGGAATCTTGAATGAAGAAAACATGCATCGTGATTGGCGC
AAAGTTTGGGATCAACAACCACAGGAAACACGCGACGAGATTGGGGAAGA
GCAATTCAAGAACTGTAAGAGTATCCTCTGTTAATCTTATCAATTTCGCC
CCATATTCTTTGTTAATTTCTTCTCGGCGCACAATTTAGAGTGGGAACAT
TTTGGACTAAATAACAAACCTGTTTAATATTCAAAAGGTTAAGTCTCACT
AAATATACTTAACCGTACCAACAAATCGATAGAAAGTCAGTTTTTACGAG
CTTTGAATGACTCAATATAACACCCCATTCTTTCTTTTAGAGCCGGTAGG
ATTTTTCAGCCTGTTTGGGTAAAAATGGCAGATTGAAACTCGATGGAGAT
TGATACTCTCATGTTTTTTATGGCTAGGGATTTGAGTTTGATTTTATACT
AGGGACGATATTTTGGCCAACTTTTCCAGTGGGAGGGGTCCCACTGGTTC
TGTGAGAAAGGGGTGTAATATACAACGTACAAGTTTACATTTATACCCAT
CAACGCAATGGTTTCAGAGAAGACTTGAGGTTACTGTGTTACTACAAATA
AACGCCCCCTCGAATAAACGCCAATAAACGCCCACCTCAAATAAACGCTC
CCTTCGAATAAACGCCTCCTCTCTAAAAAGGGCATTTATTTGAAACAAGT
AGCTGTAAGGTAAAACTATATGGAGAAAAACTTTTTTTTTCAGTTTTCAA
ATTAATTTTGACCCATTTTTACCTCTCTAAAATAAAATATTTGAACTGAA
GTAAAACAAAAACGCATAACAAGGTTCCCATTTACTTTAATAAAGTGACC
TTTGTTAAAGATTATTTAATAAACGCCCACCTTCTGTTAAACGCCTCCTC
AAAAACGTGTTAATATGTATATTGTATATAGACTGAAACTGCACATGAAG
AAATAAAATATGGTTATTGTGCAGTTTACCCTAACTCCACTCTTTTTTTC
AGTTGTATCCTCTTTCTTCAATTCCATCAAAATCACTCAAAACATTGGTG
AAGTTACAAAAAGAATCCGTCACGCATTGTTGGCAAAGTTCCCGAGACGT
AGGTACATCACAGGACTTGATAGTAAACTGTACGCCATTGGATCACACCT
TCCGACAACTCTTGTGGATTGGATTATCTGCTGTAAGATCGGCATTCTTC
ATCCAAAGACAACAACGAAGAAAAGTCAATGATTTGTCGAAGTTCGTTGG
TTTTCATGGAACAATGATTTTGAATTAAGGATTACATAAATGATTTCTGT
ACGTTCAAACGATCATTCTTCATATAAATTTTATTATATTTCGACCTCCT
TAGTGGAGGTCTTCATCAGGTTTACAAATGTTCAGTTAAGATTATTGTTT
TGACGTCAGATCAGATAACATCAATGCAATGCATGACCTCAACCTGATAT
GTGAGAGCATTGGTTTCCAGAACCTAGATTACATAGAATATAATACTTTC
AAACAAGATTTTTACGTAAATAGACCATTTTTTGGGAAAAAAGACTCCAA
GGGTCCCTCGCTAAAAAGGTCGATATTTGATTTATTTTTGACTGAGACAC
CCATCAACTTCCAAACTGACTGCCCCTCTCAAGCCTCTTAAAGGTGTCTG
AAAATTAGTTTCTGTGTTATTTGATATCATCCTAACGGGAGTAAGATGAG
ACAAAAATGTCTATTTTGCAGTTAAATCATTTCAAATCTGATGGATTATA
TACGTATTAACGGTTTCTTTTATTTCGGTCTAATAGATAAAACATCGTTT
TGGAAGAGAGTGGCGCGTCTTAGAATTTTATTTAGCTAATGATAATAATG
ACTATTAGATTGCAATATGGATCCATGATGGCATTACCATATCGGAAGTA
GTTCACGAAAATGATTATGGTATGCTTTTAAGCAGGATGCATAGCAGTGT
AGGATATTCCAAATAATTGATTCATTTCCGACGTTTGTCTCCGTTTTCAT
TTTCATTCTATTTGCTCCACTACTTTGATGCTTTGTTTATTTACCATGGA
TTATGTTGTTTTGAATATTTTTGGAGTGCTTCAAAGTCAGTTTGTTAAAC
CTTTAAGTGCCACGGTCCTATTTTTCTAAGTTTTTGAAGAAAATCGCAGG
ACAGAATAAAAACAGGGCTAAATTTGGAGGTTCTTGGATCATTCGTTGAC
CAAAAATGGTCAAAAAACGGTCAAAATCTCAAAAAAGTGGATTTTTTGAC
AAACTTTTGCATTTTTTGATTTTTTGGCTTAAAATCTCGCTGGAAAGTCT
CACTCTTGAATTTTTTTTTTGTACTGGCCATCCAATTCCTACGAGTTAGA
CTAAAAAGTGACAATTTCTAATTCAAACTAGGTACAATACACCTTATCAA
GAAATAAATGATTTTGAAATAAACAGGGATCAAATTGACTGTTAAAATAT
ACCCAGAAGAGGAAAAGCACGACGTCGTTTTTGACTTCATTATCAATTCG
TCTATTCAACTTGTTCTTGAATTGTTCCATAAGTGAATTTTGACTTCAAA
AATTATGAAACCCGATCTTCTGGGTCTATGGAATAGTGGAATACTTTTTT
TGCTTATGGATTTTGTTTACCCTTCAGTTCCATGAGCTTTGCACTTTTTG
AAAAGAATTTTTAAAGAGTCGTCTTTCTTTAGCAATAGCCATTACAAAAG
GGCTTATATCGGCTCTAAACTTTCATCAAATTTTATACTTTTCCAATGGT
AAACTTAATCAGGCAGAAGATATCAGCCGTTAACTATGGGTCTCTCAGGG
AGTCGCCCAGCGTTGGTTGGCAAATGAATGTCATAGTGGCGGAAATCCCC
CCCTAGCCTTGATATTCTTTTTAGTTTAAGGAAGAAAGGAAATATGGAGA
TTTGCTGTGAATATTTTTGGAGCAGTTTATGTGTCAGCTTGATTACGCTT
TATCTCCTTGTTAATTTCATTGTGGATCATTGGATTTCAACCGAAGAGAA
GAAAAATGTTTTGGTGACAGGCTGTGATTCAGGTTTTGGTTTTCAAACAG
CTTTAGAATTAAGTGAATCTAATTGTAAAGTTCTTGCTGGTTGTTTAACT
AATGATGGTGTCAAGCAACTTGAGAATGATATGAGGTTTCAAGGGATAGC
TTTTATTCTTGACGTCACCAAAGACGAGGATGTTCAAAAAGCAAAAGAAA
TGATCGAACGAAATGGAGGTATAAACTTTTCTTAACTCGAACCATTTTCT
GTATCTTCCCGAACTATTTTTTGTTCCCAATTACACATCTTTTTATAAGC
AGTTTTCTAAGACTGGAAGGCTCAAATTAGCCTAAGTTTTTTCACTACCT
CATAGAATAAAAGCTTTTTAGATAGTAAAATCATGATAGACGATAGGCCT
TGACCCAATAAGCATAAATATGGTATAATATCCGGGGTGGTGAAAGCTAT
TTTTTAGAAAATGAGCTAGAATGCTAAGCAACCTTAGCCTTGGCCCGAAA
ATTGGAGTTGCTTATCAGAAAATTGTTATCAAATATATCCAAATTTTATA
AAATTTCCATGGTATTTATTTGCAGGATTACATGGTCTAGTAAACAACGC
AGGCATTGCTATACCAGGATTGATCGAATGGCAATCTATCGATTTGATGA
AGAAAACATTTGAAGTGAACTATTGGGGAACTGTTCGTGTTACCAAAGTC
ATGCTACCATTATTGAAAAAGTCACGTGGTCGTATCGTCAATGTGACAAG
CATGGGAGGTACAAATCAGTTAACTTTGTAAAATGAAAAATACTATAGAT
ATATCCAAAAAAAAAAATATGTCCAGTGTTTCTTTAAACTTAATAAATGT
TAATATCAAATCAATCTACTCAATCTACTATTCTCTTTCCAACGGATTAT
TACAGTCATTACTTTGAGTCGTTTCTTCTCTCTTAAAAAACAATGTGTAT
ATAAATTTTCGTATAAAGTGGAATCTCCCTAATTCGAACTTCTATTATTC
GAACTATTTCAGTTCTTATCAGGAAAAAACCCTCGTAAACTACTTGTTAT
AATTCGAATGTTTCTATAATTCGAAAAAATTAGACTATCCCCAGCTCGAC
TTTGAATTAGCAAGAGCTAACTGTGTTTCATTAGTAATGTTTATTAACCT
TTTTTTCTTTTTTCAGGAAGATTATCTGTGCCTTATGGAGCTCCCTACTT
CAGTTCAAAGTATGCAGCTGAGGCGTTTTCTGATAGCTTACGTCTCGAAG
TCAAACCATGGGGTGTTTCTGTGCATTTAATCGAACCCACGTACTACAAA
ACTAATTTGGCTGGTACAAAAGAGCTAAAGAAAGTTTGGTTTAATATTTG
GGATCAACTACCACAAGAAACACATGATGAATTTGGAAAAGAACCTTTCG
AGAATTGTGAGTATTTTGGTGATCAATGTCTCATCTTTCTTAACTAACAC
CCCTTGTTTTTTATGCAAAGAAATTTCGAAAAGGTAAAACGGGGGTCACT
TTATATCTTAAAATATATCGGAGCAGTCCTTCGAGTGTGTGTGTTTTGGA
GAGGGTTTATGGAATTTTACAACGTACCTGCATAAATGTTGTCAATGTGG
ATCCTTCTTGTATTGTTTACGGCTCAAAAATCTGGTTGGGATTTTCAAAA
TTATAATTGTGGCTTTCCCACAAGGGATAACAGTTCAGTGTAGTTTACTG
CAAAAGGGATTTCTAATTTCAGGCTATTATCCTCATCGGAATGGTTATTC
TGCCAGAGAGGCTGATGAATGTTTGTCATATATTCGCCGAATCTTTATTA
CATAATTTTTACTTTAGTTGTGGATGGTGTTTTGAAAAGTATAAAGTATG
GCGATGACATATCAGAGGTTTCTGGCAAAATCAGACATGCAATGTTGGCA
CGTTTTCCAAGAAGACGTTACATTGTAGGGAAAGATTCGATTGTTTTTGC
CATTATAACGCATCTTCCGACAGTTGTTGGTGATTGGATTTTCTCGAATA
TGGCACCTTTGCTTCGACCAAAGAAAACAGTGGAGTAGTGGAATTTGTAT
GTATTTGAAGAACAAGTATTACTATACAAACTTGGATATTTTTTATGAAA
CAAATATACAGGGGTGTACGAATTCTGATTTGTTCATCACAGTACACAGC
CGCTGGTCTCCCGAGGGAAACTCAATACTAGAACCTCCGTAACTCAAACA
CTTTTCGTGACTTTTCTTAGCAGCTTGATAATCTTTTATAAGAAAAGAAT
ATGTTTATAGCCTTTTTTGCCTATTCTACACAATAGACAGCCCCAGGCTT
TTACGCTCGAAGCGAAGGAAGATATGACGTAGCCTACTTTGCCATTTTGT
AAGACTAACTACCGTGAGCACTAAAGTTGAGCTATCTCTGAAACTTAACC
TATGACGACGGATTATAAGAATTTCATCGCGCATGTCTCAATCATGTAAA
ATTATAAATCTTGTCACTAGGACGATTTTTTGCGTTTGAGTTTATAGAAA
ATTTCAAATGAATCTTATGAAAATTTAGGTAATTGTATTTTATATCTCAT
ATATTGATCTAGTTCTTATTATCTTGTAGTTAGTTAGATTTTAAATACTT
AGCTTATAATTTCAATAAAATCATTAACGTGTGTCACATTTAAAACTTCG
ACTATTTAAAAAGTTTGTTTTATAACCATTTGATAGAGGACTAATCTGGC
CACCATGAAATATATTCACGTTTCAAGCACCCCTTTCAATCCAATCAAAT
TGTATTTTCATCTGAGGGCAGTCTCTTCTCTGTCAAAATTTGTTCCCCAA
GCGAGAAATTAATACCTATTAGTCTTTAAGGCACAAAGGTTTAAGGTGTA
CAAAAATAGGAAGAAGTATTCTTTAAAGGTATATAAAAAATGATCAGTGG
ATATGGCATGTATTTCAACAATTGTTCTGAAGATTATTTTGAAATGTATT
TGACTAGTTATACAGTGCATGTATTTAAGGTAAGAAAGCTTTGCTGAAGT
ACAGTGATTAACGATGTAATAATGATAATTTATTGGCTAGAATGAGTTTG
ACGCACTAAATACAGGCTCATGGCCCTAGGCCAATTAGTTCTTTATGAGA
TTTTAGGTCCAAAAAATCTTTTTTAGCAAATATTTTGACGATTTGATACG
AAAACTTGTACATCCGCCCCAGCTTTGACAGCCAATAAAATTGGAGGAAA
AACAGCTTTTAACAACATCGATTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049035-exon-scaffold_15-1575043694:507814..508167 | TCONS_00049035-exon-scaffold_15-1575043694:507814..508167 | Clytia hemisphaerica | exon |
| TCONS_00049035-exon-scaffold_15-1575043694:503852..504034 | TCONS_00049035-exon-scaffold_15-1575043694:503852..504034 | Clytia hemisphaerica | exon |
| TCONS_00049035-exon-scaffold_15-1575043694:498812..499051 | TCONS_00049035-exon-scaffold_15-1575043694:498812..499051 | Clytia hemisphaerica | exon |
| TCONS_00049035-exon-scaffold_15-1575043694:496993..498400 | TCONS_00049035-exon-scaffold_15-1575043694:496993..498400 | Clytia hemisphaerica | exon |
| TCONS_00049035-exon-scaffold_15-1510915933:507814..508167 | TCONS_00049035-exon-scaffold_15-1510915933:507814..508167 | Clytia hemisphaerica | exon |
| TCONS_00049035-exon-scaffold_15-1510915933:503852..504034 | TCONS_00049035-exon-scaffold_15-1510915933:503852..504034 | Clytia hemisphaerica | exon |
| TCONS_00049035-exon-scaffold_15-1510915933:498812..499051 | TCONS_00049035-exon-scaffold_15-1510915933:498812..499051 | Clytia hemisphaerica | exon |
| TCONS_00049035-exon-scaffold_15-1510915933:496993..498400 | TCONS_00049035-exon-scaffold_15-1510915933:496993..498400 | Clytia hemisphaerica | exon |
| TCONS_00049035-exon-scaffold_15-1491911889:507814..508167 | TCONS_00049035-exon-scaffold_15-1491911889:507814..508167 | Clytia hemisphaerica | exon |
| TCONS_00049035-exon-scaffold_15-1491911889:503852..504034 | TCONS_00049035-exon-scaffold_15-1491911889:503852..504034 | Clytia hemisphaerica | exon |
| TCONS_00049035-exon-scaffold_15-1491911889:498812..499051 | TCONS_00049035-exon-scaffold_15-1491911889:498812..499051 | Clytia hemisphaerica | exon |
| TCONS_00049035-exon-scaffold_15-1491911889:496993..498400 | TCONS_00049035-exon-scaffold_15-1491911889:496993..498400 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_15 | supercontig | scaffold_15:496993..508167 - |
Blast
BLAST of TCONS_00049035 vs. Swiss-Prot (Human)
Match: DR9C7 (Short-chain dehydrogenase/reductase family 9C member 7 OS=Homo sapiens GN=SDR9C7 PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.055e-54 Identity = 107/292 (36.64%), Postives = 174/292 (59.59%), Query Frame = 3
Query: 135 KKNVLVTGCDSGFGFQTALELSESNCKVFAGCLTQDGVKRLESNARFRGMAFIMDVTKDEDVQKAKEVIEENGALDGI---VNNAGIAI-HGLIEWQSIELMKKTFEVNYWGTVRVTKVMLPLLKKSRGRIVNVTSMGGRLSVPYGAPYFSSKYAAEAFSDSLRLEVKPWGVSVHLIEPTYYKTNLAGTKELKKVWFNIWDQLPQETHDEFGKEPFENFVDGVLKSIKYGDD-ISEVSGKIRHAMLARFPRRRYIVGKDS-IVFAIITHLPTVVGDWIFSNMAPLLRPKKTV 992
+K V +TGCDSGFG A +L + +V A C T++G ++L+ + +R ++DVTK E ++ A + + + G+ VNNAG+ + G EW + + K VN G + VT MLP++K++RGR+VN++S GGR++V G Y SK+ EAFSDS+R E+ +GV V +IEP Y+T + G + L+ +W++LPQET D +G++ F + D + ++ + + +V + HA+++R PR RY G D+ +++ + LPT V D+I S P RP +V
Sbjct: 25 EKYVFITGCDSGFGNLLAKQLVDRGMQVLAACFTEEGSQKLQRDTSYRLQTTLLDVTKSESIKAAAQWVRDKVGEQGLWALVNNAGVGLPSGPNEWLTKDDFVKVINVNLVGLIEVTLHMLPMVKRARGRVVNMSSSGGRVAV-IGGGYCVSKFGVEAFSDSIRRELYYFGVKVCIIEPGNYRTAILGKENLESRMRKLWERLPQETRDSYGEDYFRIYTDKLKNIMQVAEPRVRDVINSMEHAIVSRSPRIRYNPGLDAKLLYIPLAKLPTPVTDFILSRYLP--RPADSV 313
The following BLAST results are available for this feature:
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