TCONS_00049036 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00049036
Unique Name	TCONS_00049036
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2221

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_15:496993..508203-
coding sequence from alignment at scaffold_15:496993..508203-

transcript sequence

>TCONS_00049036 ID=TCONS_00049036|Name=TCONS_00049036|organism=Clytia hemisphaerica|type=transcript|length=2221bp
ATTTAACTTATATATACGCTATGACATGAGAGTTTATCTCGAATAACTGT
ATCGTTATGGAGGCTTTAGACTTTTCTTGCGAAAAcaaatttattagttt
ttctGTTATCCTAATTTTTATATATTACCTGATTAATTTCATTGTGGATC
ATTGGATTTCAACCGAAGAgaagaaaaatgttttggtgACAGGCTGTGAT
TCAGGTTTTGGTTTCCAAACAGCTTTAGAATTAAGTGaatctaattgtaa
agtttttgctGGTTGTTTAACTCAAGATGGTGTCAAACGACTTGAGAGCA
ATGCCAGGTTTCGAGGGATGGCTTTTATCATGGACGTGACTAAAGACGAG
GATGTTCAGAAAGCAAAGGAGGTCATTGAAGAGAATGGAGCTTTGGACGG
TATAGTTAACAATGCTGGTATCGCTATTCATGGATTGATCGAATGGCAAT
CTATCGAATTGATGAAGAAAACATTCGAAGTGAATTATTGGGGAACTGTT
CGTGTTACCAAAGTCATGCTACCATTATTGAAAAAGTCACGGGGTCGTAT
CGTCAATGTGACAAGCATGGGAGGACGACTCTCACCACCCTACACTGCCC
CTTATTACGGTTCAAAATATGCAGCTGAAGCGTTTTCTGATAGCTTACGT
CTCGAAGTCAAACCATGGGGTGTTTCTGTGCATTTAATCGAACCCACGTA
CTACAAAACTAATTTGGCTGGTACAAAAGAGCTAAAGAAAGTTTGGTTTA
ATATTTGGGATCAACTACCACAAGAAACACATGATGAATTTGGAAAAGAA
CCTTTCGAGAATTTTGTGGATGGTGTTTTGAAAAGTATAAAGTATGGCGA
TGACATATCAGAGGTTTCTGGCAAAATCAGACATGCAATGTTGGCACGTT
TTCCAAGAAGACGTTACATTGTAGGGAAAGATTCGATTGTTTTTGCCATT
ATAACGCATCTTCCGACAGTTGTTGGTGATTGGATTTTCTCGAATATGGC
ACCTTTGCTTCGACCAAAGAAAACAGTGGAGTAGTGGAATTTGTATGTAT
TTGAAGAACAAGTATTACTATACAAACTtggatattttttatgaaacaaa
TATACAGGGGTGTACGAATTCTGATTTGTTCATCACAGTACACAGCCGCT
GGTCTCCCGAGGGAAACTCAATACTAGAACCTCCGTAACTCAAACACTTT
TCGTGACTTTTCTTAGCAGCTTGAtaatcttttataagaaaagaatatgt
ttatagccTTTTTTGCCTattctacacaatagacagcccCAGGCTTTTAC
GCTCGAagcgaaggaagatatgacgtagcctacttTGCCATTTTGTAAGA
CTAACTACCGTGAGCACTAAAGTTGAGCTATCTCTGAAACTTAACCTATG
ACGACGGATTATAAGAATTTCATCGCGCATGTCTCAATCATGTAAAATTA
TAAATCTTGTCACTAGGACGATTTTTTGCGTTTGAGtttatagaaaattt
caaatgaatCTTATGAAAATTTAGGTAATTGTATTTTATATCTCATATAT
TGATCTAGTTCTTATTATCTTGTAGTTAGTTAGATTTTAAATACTTAGct
tataatttcaataaaatcattaaCGTGTGTCACATTTAAAACTTCGACTa
tttaaaaagtttgttttaTAACCATTTGATAGAGGACTAATCTGGCCACC
ATGAAATATATTCACGTTTCAAGCACCCCTTTCAATCCAATCAAATTGTA
TTTTCATCTGAGGGCAGTCTCTTCTCTGTCAAAATTTGTTCCCCAAGCGA
GAAATTAATACCTATTAGTCTTTAAGGCACAAAGGTTTAAGGTGTACAAA
AATAGGAAGAAGTATTCTTTAAAGGTATATAAAAAATGATCAGTGGATAT
GGCATGTATTTCAACAATTGTTCTGaagattattttgaaatgtatttgAC
TAGTTATACAGTGCATGTATTTAAGGTAAGAAAGCTTTGCTGAAGTACAG
TGATTAACGatgtaataatgataatttATTGGCTAGAATGAGTTTGACGC
ACTAAATACAGGCTCATGGCCCTAGGCCAATTAGTTCTTTATGAGATTTT
AGgtccaaaaaatcttttttagcaAATATTTTGACGATTTGATACGAAAA
CTTGTACATCCGCCCCAGCTTTGACAGCCAATAAAATTGGaggaaaaaca
gcttttaacAACATCGATTAT

Run BLAST on NCBI

protein sequence of TCONS_00049036-protein

>TCONS_00049036-protein ID=TCONS_00049036-protein|Name=TCONS_00049036-protein|organism=Clytia hemisphaerica|type=polypeptide|length=325bp
MEALDFSCENKFISFSVILIFIYYLINFIVDHWISTEEKKNVLVTGCDSG
FGFQTALELSESNCKVFAGCLTQDGVKRLESNARFRGMAFIMDVTKDEDV
QKAKEVIEENGALDGIVNNAGIAIHGLIEWQSIELMKKTFEVNYWGTVRV
TKVMLPLLKKSRGRIVNVTSMGGRLSPPYTAPYYGSKYAAEAFSDSLRLE
VKPWGVSVHLIEPTYYKTNLAGTKELKKVWFNIWDQLPQETHDEFGKEPF
ENFVDGVLKSIKYGDDISEVSGKIRHAMLARFPRRRYIVGKDSIVFAIIT
HLPTVVGDWIFSNMAPLLRPKKTVE

Run BLAST on NCBI

transcript from alignment at scaffold_15:496993..508203-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00049036 ID=TCONS_00049036|Name=TCONS_00049036|organism=Clytia hemisphaerica|type=transcript|length=11211bp|location=Sequence derived from alignment at scaffold_15:496993..508203- (Clytia hemisphaerica)
ATTTAACTTATATATACGCTATGACATGAGAGTTTATCTCGAATAACTGT
ATCGTTATGGAGGCTTTAGACTTTTCTTGCGAAAACAAATTTATTAGTTT
TTCTGTTATCCTAATTTTTATATATTACCTGATTAATTTCATTGTGGATC
ATTGGATTTCAACCGAAGAGAAGAAAAATGTTTTGGTGACAGGCTGTGAT
TCAGGTTTTGGTTTCCAAACAGCTTTAGAATTAAGTGAATCTAATTGTAA
AGTTTTTGCTGGTTGTTTAACTCAAGATGGTGTCAAACGACTTGAGAGCA
ATGCCAGGTTTCGAGGGATGGCTTTTATCATGGACGTGACTAAAGACGAG
GATGTTCAGAAAGCAAAGGAGGTCATTGAAGAGAATGGAGGTATAAGACT
TTTTTTTATTTAAGTGTTTCGTCAATTGATACTTAACATCCGCTTATAGC
TATCCGTCTGACTGTATGTCTCGTGTTTTACTAGGTTATCAAAGATTTGG
GTATATCAAGGGCAGTAGCATGGTGGCAGGGGGCAGTCCCTCCCCAGCGG
CCGATTTTTTGGGGGGGTGCCAAAATACAAAGGGCGCAAAAAGGTACCTC
TGATTACTAATATCGGCGCCCATTTCATGGCCCCCGTCACCGGGGGGGCC
AGGGGGNCGAAAGGTATGTACCCCTTCTAAAATGTCATATTTTTAACTGG
TCCAAAAATTAATCTTTAAAACAAAATTTTCCTAAGTTTTCCTTTAATAT
CGAATTCCAAAATACTTTTTGAAATAATTTCTACGTAATATAGATAATTA
TTGAATTGAATTAACTCGTAATTTGCAAAGCTTTTCCATACTTAGAACTT
AGAGCTCCAAGTAACCAAACTGTTACAGAATTGTGTTCTCATATGTTAAA
CTAATAGAAATATTTACTCCTGTTTATTTTAGCACGCAATCTGTATTTTG
TCATTATTGTATGGTGCAGGAGAGAAAGGGAAACCTGAAGGACCAGGGAT
CCAAAGAGGACGCATACATTACAAAAGGATTCTCGTCGTGGAAAAAGGCA
CCGAAATGCTTTCAGGCTCACCAAGATTCAGCATGTCATAAAACAGCACA
AACGTACCAACTAACGATTCCCAAATGCTTAGACGTCGAAGAAATGATTG
ACAACCAACTGACCGAAAAACGTACCGTCGAACGAAAATACCTTCTTCAA
GTAATCAGATGCTTACGGTATTTGGCAAGGCAAGGGATCGCATTGCAAGG
TGACGACGGTAACGATAACTTTACACAACTGCTACACCTTGTCGGCATAA
GTGATGAGAATCTCATGAAGCACCTGGATGGGAAAATAGGTAGCAAATAC
ACGCATAGTGATGTTCAGAATGAACAGAATNGTGACGACGGTAACGATAA
CTTTACACAACTGCTACACCTTGTCGGCATAAGTGATGAGAATCTCATGA
AGCACCTGGATGGGAAAATAGGTAGCAAATACACGCATAGTGATGTTCAG
AATGAATTACTTAACATCATGGCGACTCTAACATTACTGGAGAAACTTAA
AGATATTGACGAGCGACGGTTTTTCTCCATGATTGCAGATGAGGGCACTG
ACATTAGCAATAAAGAGCAGTTATCCTTTTGCTTACGTACCGTTGACGAA
AACTTAGAGGCTTATGAAGACTTTATTGGGTTTCATCAGTTGGAAAATAT
TAAAAGTGATGTCATAGTTCGCGTTATCAAAGATATCCTTCTAAGGTTAA
ATCTGTCTTTGGAGAATTGCCGAGGTCAGACGTACGACGGAGCTTCGAAT
ATGATGGGTAGAAAATCTGGTGTGTCAACACAGATATTAGCCGAGCAACC
AAAAGCCGTTGCGATTCATTGCGAGGGGCATTCTTTAAGTCTAAGCATAA
AATCATTGACAAGTGAATGTGACACTCTCAAGGATACTTTGAGTGTTGTG
AAGGAGATATGTGTACTCGTGAAATATTCCCCTAAAAGAGAAAACCTTCT
TGGAAACATCCACGAAAGCATCGAAAAAAGCGGAGAAGATTTCGAACCCA
TGAAGAAGTTGACAAAATTATCGACAACACGCTGGACAGTCCGAGCCGAA
TGTATGAAGAGAATTATCGATAATTACGAATCGCTGTTATTACTCTGGGA
CGAATGCTTGAAAGAAAAACTGGACCAAGAAACCAAAGCCAGGATAATCG
GTTGCAAGAGTCAAATGAGATCATTCAATTTCTACTTCGGCTTAACTCTG
TCCCACACGCTGTACAACATGACAGATAATCTCTCCAGGAGTCTTCAAGG
TGAAAAGATGTCAGCCCTTTCGGGAAGAAAATCGGCCGAATTGGTTATTG
AAACCATTTCGAAAATGAGAGCTGATGAAGAATTCGTGGCTTTCTATGAA
ACCACCACTAAGGATGCAGAAGCGTTAAAGAAAGTGTGCGAACCAAAGCT
ACCAAGAAAACGAAAGAAACCTAAAAACTACTCCATCTTGCAGTATGTCA
CGCGTCCTGACAATGAGAAGGAAAGTGAAGCTTACTACTCCAAAACTCCA
GAGGAACACTACCACCTCATCTATAACGCAGCCATTGATATTTTGGTCAA
TGTTATGCAAGACCGTTTCAACCAGCCAGCTTTGAAAAAATTTGAAAATG
TCGAGCAGCTTCTTTTAAAAGCAATCAAAAGTCAAAATTTTTCTGATGAG
TTGGAAGTTATGAAAAAAGATTTCGAAGGAGATTTCGACGAGAACCAAAT
CGAAAGCGAATTGAGACTCATCAAAACCATATTCGAAGGATCGGAACCAA
TCAATTTTCGTGATATTTGTAAAACATTACGCACGGTTGATAGAGGGATT
CGTCCTATGATCAAAAACATTTGGACAGTTGTGCGAATCGTTCTTACAAG
TGGAGCAACATCTGCCACACCAGAACGCTCTTTTTCGATGCAGAGAAGAA
TAAAAACGTGGCTCAGATCGACAATGGGCCAAAGACGCTACAACTCCTTA
GCTATCCTTAATTCTCATAAGAAAATTGTTGATAAGCTGTCACTCATAGA
AGTGGCGAAAAGGTTCACGGAATGCCAGGAAAAACGCCAGAATGAATTTG
GAACATTTAGAGAAAGTGATTTGTAGCCGATTCCTTTTTTACGATTTATG
ATATATACTAGGATAATTTTTGTGTTTACTTTAGGATGTTGTCATTATAG
AAATGAAAAAGATATCTTTGAAAGATGAATCATAATTGTACTTACATTGA
CTTAAGTATACCGTTTTAGGGGCAAAATAAGGGTTAAAAACGAAAAATTT
TCTTCGTCGCCCAACCATGGTGGGCGACATTTTAAAATTTTTTTGGCCCC
CCCACTTTTTTTTGCACGCCGGGGGCCATGCATTTGCTTAGAATTTGCAG
TTTTCGGTCAAAANTTACTAATATCGGCGCCCATTTGCTTTTTTACACCT
TACAATTTGCAGTTTTCGGTCAAAAATATTAGTACAATAAGGCTCCAAAA
TATCTAAAAATTGAATAAAAGAACAAAGCTCTAAGCCTGGGATGAACGAG
TTTTAAGCAAATTACGCAAGGTATACTTTAGGCGTACAAACTTTCGCAAA
CAGAAACTTTCGCGGTTTTCGTGAATTTTACCCTTTATCGCGAAAGTAAA
AGTTTTCGAAAATTCTTGAAAGGGCTATCCGCGGAAGTTACTAGAAAAGT
ACTCTTTTAACCTGCTAACGCTTCATAAGTCAAAAAGACAAAAGTTTCAA
TCCAATTTGTAAGCAATTTTTTCATGTGAAAATTTTCATTTTTGTCTTGA
TTCGTGAAAGTTTATTCATGCTCGCGAAAGATATTCTCGTCGAGTTCGCG
AAAGTAAATGTTGGAAATTTCGCGATTTTCCGACCTCGCGAAGGTTTCTG
CTCGGGAAAGTTTGCATGCCTAAAGTACCATAGTCATTGTACCATAAATT
GTAAAATCCACCTTGTAGATAAATAAGAACAAGGTAAAGAACATAGTAAA
GCTTAGTGTGCTGAAAAATGAGAACGGCCGAGCTTTAAACGATTCTAATT
ATAGAACTTCAATTAGAATGTTATCTCCTTAATATTCAGCCACCAAAAAT
GAAAATTAAAAATGGTAACTCAAGCTGCAAGATTTAGTTATACTGTGAAT
CTTCCTATATTTTCTACAGCTTTGGACGGTATAGTTAACAATGCTGGTAT
CGCTATTCATGGATTGATCGAATGGCAATCTATCGAATTGATGAAGAAAA
CATTCGAAGTGAATTATTGGGGAACTGTTCGTGTTACCAAAGTCATGCTA
CCATTATTGAAAAAGTCACGGGGTCGTATCGTCAATGTGACAAGCATGGG
AGGTGTGTTGTTTTTACATATAGAACTGCAAACTGTTTCATCTATCTTTT
TGTGATCCATTGCGAAAATGAATGGTTTTTTCAAAAACATGAACCCATGA
TCAGAAAATAGTTTTCTTCTAACTTTTGTCTTTTTAAAAATAGATTTCAT
GGCTGGATAGCAGGATGGCGGGATGGCGGGATTGCGGTAATGGTATTACA
ACCAAAAATGAATAACCTACTTTTCTCGCCTTTCTCTATTAAGAATAGCT
TTTCATGACTTCAGATTCTCAATAAAGACTTTTATTTGAAACTACAGTTG
CACTCTCTAATTCGACGTTCTATTATTCGATACGCTCCATTAATTCGATA
ATATTGAAAGTCACCGTCAACAAGAAACTCTCATAAATGCCGATCTATTT
GAAAATCGAATTAGATAGCGTCAACTGTAATCTGCTTTTTCTTCGCTAAC
AAGCCTTTCATGTTACCCTCTCGATAATCATCATTTACATGTGTGATTCT
ATTTTGATAGGACGACTCTCACCACCCTACACTGCCCCTTATTACGGTTC
AAAATATGCAGCTGAAGCGTTTTCTGATAGCTTACGTCTCGAAGTCAAAC
CATGGGGTGTTTCAGTACATATTATCGAACCCACGTTCTATGCTACTGGA
ATCTTGAATGAAGAAAACATGCATCGTGATTGGCGCAAAGTTTGGGATCA
ACAACCACAGGAAACACGCGACGAGATTGGGGAAGAGCAATTCAAGAACT
GTAAGAGTATCCTCTGTTAATCTTATCAATTTCGCCCCATATTCTTTGTT
AATTTCTTCTCGGCGCACAATTTAGAGTGGGAACATTTTGGACTAAATAA
CAAACCTGTTTAATATTCAAAAGGTTAAGTCTCACTAAATATACTTAACC
GTACCAACAAATCGATAGAAAGTCAGTTTTTACGAGCTTTGAATGACTCA
ATATAACACCCCATTCTTTCTTTTAGAGCCGGTAGGATTTTTCAGCCTGT
TTGGGTAAAAATGGCAGATTGAAACTCGATGGAGATTGATACTCTCATGT
TTTTTATGGCTAGGGATTTGAGTTTGATTTTATACTAGGGACGATATTTT
GGCCAACTTTTCCAGTGGGAGGGGTCCCACTGGTTCTGTGAGAAAGGGGT
GTAATATACAACGTACAAGTTTACATTTATACCCATCAACGCAATGGTTT
CAGAGAAGACTTGAGGTTACTGTGTTACTACAAATAAACGCCCCCTCGAA
TAAACGCCAATAAACGCCCACCTCAAATAAACGCTCCCTTCGAATAAACG
CCTCCTCTCTAAAAAGGGCATTTATTTGAAACAAGTAGCTGTAAGGTAAA
ACTATATGGAGAAAAACTTTTTTTTTCAGTTTTCAAATTAATTTTGACCC
ATTTTTACCTCTCTAAAATAAAATATTTGAACTGAAGTAAAACAAAAACG
CATAACAAGGTTCCCATTTACTTTAATAAAGTGACCTTTGTTAAAGATTA
TTTAATAAACGCCCACCTTCTGTTAAACGCCTCCTCAAAAACGTGTTAAT
ATGTATATTGTATATAGACTGAAACTGCACATGAAGAAATAAAATATGGT
TATTGTGCAGTTTACCCTAACTCCACTCTTTTTTTCAGTTGTATCCTCTT
TCTTCAATTCCATCAAAATCACTCAAAACATTGGTGAAGTTACAAAAAGA
ATCCGTCACGCATTGTTGGCAAAGTTCCCGAGACGTAGGTACATCACAGG
ACTTGATAGTAAACTGTACGCCATTGGATCACACCTTCCGACAACTCTTG
TGGATTGGATTATCTGCTGTAAGATCGGCATTCTTCATCCAAAGACAACA
ACGAAGAAAAGTCAATGATTTGTCGAAGTTCGTTGGTTTTCATGGAACAA
TGATTTTGAATTAAGGATTACATAAATGATTTCTGTACGTTCAAACGATC
ATTCTTCATATAAATTTTATTATATTTCGACCTCCTTAGTGGAGGTCTTC
ATCAGGTTTACAAATGTTCAGTTAAGATTATTGTTTTGACGTCAGATCAG
ATAACATCAATGCAATGCATGACCTCAACCTGATATGTGAGAGCATTGGT
TTCCAGAACCTAGATTACATAGAATATAATACTTTCAAACAAGATTTTTA
CGTAAATAGACCATTTTTTGGGAAAAAAGACTCCAAGGGTCCCTCGCTAA
AAAGGTCGATATTTGATTTATTTTTGACTGAGACACCCATCAACTTCCAA
ACTGACTGCCCCTCTCAAGCCTCTTAAAGGTGTCTGAAAATTAGTTTCTG
TGTTATTTGATATCATCCTAACGGGAGTAAGATGAGACAAAAATGTCTAT
TTTGCAGTTAAATCATTTCAAATCTGATGGATTATATACGTATTAACGGT
TTCTTTTATTTCGGTCTAATAGATAAAACATCGTTTTGGAAGAGAGTGGC
GCGTCTTAGAATTTTATTTAGCTAATGATAATAATGACTATTAGATTGCA
ATATGGATCCATGATGGCATTACCATATCGGAAGTAGTTCACGAAAATGA
TTATGGTATGCTTTTAAGCAGGATGCATAGCAGTGTAGGATATTCCAAAT
AATTGATTCATTTCCGACGTTTGTCTCCGTTTTCATTTTCATTCTATTTG
CTCCACTACTTTGATGCTTTGTTTATTTACCATGGATTATGTTGTTTTGA
ATATTTTTGGAGTGCTTCAAAGTCAGTTTGTTAAACCTTTAAGTGCCACG
GTCCTATTTTTCTAAGTTTTTGAAGAAAATCGCAGGACAGAATAAAAACA
GGGCTAAATTTGGAGGTTCTTGGATCATTCGTTGACCAAAAATGGTCAAA
AAACGGTCAAAATCTCAAAAAAGTGGATTTTTTGACAAACTTTTGCATTT
TTTGATTTTTTGGCTTAAAATCTCGCTGGAAAGTCTCACTCTTGAATTTT
TTTTTTGTACTGGCCATCCAATTCCTACGAGTTAGACTAAAAAGTGACAA
TTTCTAATTCAAACTAGGTACAATACACCTTATCAAGAAATAAATGATTT
TGAAATAAACAGGGATCAAATTGACTGTTAAAATATACCCAGAAGAGGAA
AAGCACGACGTCGTTTTTGACTTCATTATCAATTCGTCTATTCAACTTGT
TCTTGAATTGTTCCATAAGTGAATTTTGACTTCAAAAATTATGAAACCCG
ATCTTCTGGGTCTATGGAATAGTGGAATACTTTTTTTGCTTATGGATTTT
GTTTACCCTTCAGTTCCATGAGCTTTGCACTTTTTGAAAAGAATTTTTAA
AGAGTCGTCTTTCTTTAGCAATAGCCATTACAAAAGGGCTTATATCGGCT
CTAAACTTTCATCAAATTTTATACTTTTCCAATGGTAAACTTAATCAGGC
AGAAGATATCAGCCGTTAACTATGGGTCTCTCAGGGAGTCGCCCAGCGTT
GGTTGGCAAATGAATGTCATAGTGGCGGAAATCCCCCCCTAGCCTTGATA
TTCTTTTTAGTTTAAGGAAGAAAGGAAATATGGAGATTTGCTGTGAATAT
TTTTGGAGCAGTTTATGTGTCAGCTTGATTACGCTTTATCTCCTTGTTAA
TTTCATTGTGGATCATTGGATTTCAACCGAAGAGAAGAAAAATGTTTTGG
TGACAGGCTGTGATTCAGGTTTTGGTTTTCAAACAGCTTTAGAATTAAGT
GAATCTAATTGTAAAGTTCTTGCTGGTTGTTTAACTAATGATGGTGTCAA
GCAACTTGAGAATGATATGAGGTTTCAAGGGATAGCTTTTATTCTTGACG
TCACCAAAGACGAGGATGTTCAAAAAGCAAAAGAAATGATCGAACGAAAT
GGAGGTATAAACTTTTCTTAACTCGAACCATTTTCTGTATCTTCCCGAAC
TATTTTTTGTTCCCAATTACACATCTTTTTATAAGCAGTTTTCTAAGACT
GGAAGGCTCAAATTAGCCTAAGTTTTTTCACTACCTCATAGAATAAAAGC
TTTTTAGATAGTAAAATCATGATAGACGATAGGCCTTGACCCAATAAGCA
TAAATATGGTATAATATCCGGGGTGGTGAAAGCTATTTTTTAGAAAATGA
GCTAGAATGCTAAGCAACCTTAGCCTTGGCCCGAAAATTGGAGTTGCTTA
TCAGAAAATTGTTATCAAATATATCCAAATTTTATAAAATTTCCATGGTA
TTTATTTGCAGGATTACATGGTCTAGTAAACAACGCAGGCATTGCTATAC
CAGGATTGATCGAATGGCAATCTATCGATTTGATGAAGAAAACATTTGAA
GTGAACTATTGGGGAACTGTTCGTGTTACCAAAGTCATGCTACCATTATT
GAAAAAGTCACGTGGTCGTATCGTCAATGTGACAAGCATGGGAGGTACAA
ATCAGTTAACTTTGTAAAATGAAAAATACTATAGATATATCCAAAAAAAA
AAATATGTCCAGTGTTTCTTTAAACTTAATAAATGTTAATATCAAATCAA
TCTACTCAATCTACTATTCTCTTTCCAACGGATTATTACAGTCATTACTT
TGAGTCGTTTCTTCTCTCTTAAAAAACAATGTGTATATAAATTTTCGTAT
AAAGTGGAATCTCCCTAATTCGAACTTCTATTATTCGAACTATTTCAGTT
CTTATCAGGAAAAAACCCTCGTAAACTACTTGTTATAATTCGAATGTTTC
TATAATTCGAAAAAATTAGACTATCCCCAGCTCGACTTTGAATTAGCAAG
AGCTAACTGTGTTTCATTAGTAATGTTTATTAACCTTTTTTTCTTTTTTC
AGGAAGATTATCTGTGCCTTATGGAGCTCCCTACTTCAGTTCAAAGTATG
CAGCTGAGGCGTTTTCTGATAGCTTACGTCTCGAAGTCAAACCATGGGGT
GTTTCTGTGCATTTAATCGAACCCACGTACTACAAAACTAATTTGGCTGG
TACAAAAGAGCTAAAGAAAGTTTGGTTTAATATTTGGGATCAACTACCAC
AAGAAACACATGATGAATTTGGAAAAGAACCTTTCGAGAATTGTGAGTAT
TTTGGTGATCAATGTCTCATCTTTCTTAACTAACACCCCTTGTTTTTTAT
GCAAAGAAATTTCGAAAAGGTAAAACGGGGGTCACTTTATATCTTAAAAT
ATATCGGAGCAGTCCTTCGAGTGTGTGTGTTTTGGAGAGGGTTTATGGAA
TTTTACAACGTACCTGCATAAATGTTGTCAATGTGGATCCTTCTTGTATT
GTTTACGGCTCAAAAATCTGGTTGGGATTTTCAAAATTATAATTGTGGCT
TTCCCACAAGGGATAACAGTTCAGTGTAGTTTACTGCAAAAGGGATTTCT
AATTTCAGGCTATTATCCTCATCGGAATGGTTATTCTGCCAGAGAGGCTG
ATGAATGTTTGTCATATATTCGCCGAATCTTTATTACATAATTTTTACTT
TAGTTGTGGATGGTGTTTTGAAAAGTATAAAGTATGGCGATGACATATCA
GAGGTTTCTGGCAAAATCAGACATGCAATGTTGGCACGTTTTCCAAGAAG
ACGTTACATTGTAGGGAAAGATTCGATTGTTTTTGCCATTATAACGCATC
TTCCGACAGTTGTTGGTGATTGGATTTTCTCGAATATGGCACCTTTGCTT
CGACCAAAGAAAACAGTGGAGTAGTGGAATTTGTATGTATTTGAAGAACA
AGTATTACTATACAAACTTGGATATTTTTTATGAAACAAATATACAGGGG
TGTACGAATTCTGATTTGTTCATCACAGTACACAGCCGCTGGTCTCCCGA
GGGAAACTCAATACTAGAACCTCCGTAACTCAAACACTTTTCGTGACTTT
TCTTAGCAGCTTGATAATCTTTTATAAGAAAAGAATATGTTTATAGCCTT
TTTTGCCTATTCTACACAATAGACAGCCCCAGGCTTTTACGCTCGAAGCG
AAGGAAGATATGACGTAGCCTACTTTGCCATTTTGTAAGACTAACTACCG
TGAGCACTAAAGTTGAGCTATCTCTGAAACTTAACCTATGACGACGGATT
ATAAGAATTTCATCGCGCATGTCTCAATCATGTAAAATTATAAATCTTGT
CACTAGGACGATTTTTTGCGTTTGAGTTTATAGAAAATTTCAAATGAATC
TTATGAAAATTTAGGTAATTGTATTTTATATCTCATATATTGATCTAGTT
CTTATTATCTTGTAGTTAGTTAGATTTTAAATACTTAGCTTATAATTTCA
ATAAAATCATTAACGTGTGTCACATTTAAAACTTCGACTATTTAAAAAGT
TTGTTTTATAACCATTTGATAGAGGACTAATCTGGCCACCATGAAATATA
TTCACGTTTCAAGCACCCCTTTCAATCCAATCAAATTGTATTTTCATCTG
AGGGCAGTCTCTTCTCTGTCAAAATTTGTTCCCCAAGCGAGAAATTAATA
CCTATTAGTCTTTAAGGCACAAAGGTTTAAGGTGTACAAAAATAGGAAGA
AGTATTCTTTAAAGGTATATAAAAAATGATCAGTGGATATGGCATGTATT
TCAACAATTGTTCTGAAGATTATTTTGAAATGTATTTGACTAGTTATACA
GTGCATGTATTTAAGGTAAGAAAGCTTTGCTGAAGTACAGTGATTAACGA
TGTAATAATGATAATTTATTGGCTAGAATGAGTTTGACGCACTAAATACA
GGCTCATGGCCCTAGGCCAATTAGTTCTTTATGAGATTTTAGGTCCAAAA
AATCTTTTTTAGCAAATATTTTGACGATTTGATACGAAAACTTGTACATC
CGCCCCAGCTTTGACAGCCAATAAAATTGGAGGAAAAACAGCTTTTAACA
ACATCGATTAT

Coding sequence (CDS) from alignment at scaffold_15:496993..508203-

>TCONS_00049036 ID=TCONS_00049036|Name=TCONS_00049036|organism=Clytia hemisphaerica|type=CDS|length=4890bp|location=Sequence derived from alignment at scaffold_15:496993..508203- (Clytia hemisphaerica)
TTGTGGATGGTGTTTTGAAAAGTATAAAGTATGGCGATGACATATCAGAG
GTTTCTGGCAAAATCAGACATGCAATGTTGGCACGTTTTCCAAGAAGACG
TTACATTGTAGGGAAAGATTCGATTGTTTTTGCCATTATAACGCATCTTC
CGACAGTTGTTGGTGATTGGATTTTCTCGAATATGGCACCTTTGCTTCGA
CCAAAGAAAACAGTGGAGTAGGCGTTTTCTGATAGCTTACGTCTCGAAGT
CAAACCATGGGGTGTTTCTGTGCATTTAATCGAACCCACGTACTACAAAA
CTAATTTGGCTGGTACAAAAGAGCTAAAGAAAGTTTGGTTTAATATTTGG
GATCAACTACCACAAGAAACACATGATGAATTTGGAAAAGAACCTTTCGA
GAATTGACGACTCTCACCACCCTACACTGCCCCTTATTACGGTTCAAAAT
ATGCAGCTGAACTTTGGACGGTATAGTTAACAATGCTGGTATCGCTATTC
ATGGATTGATCGAATGGCAATCTATCGAATTGATGAAGAAAACATTCGAA
GTGAATTATTGGGGAACTGTTCGTGTTACCAAAGTCATGCTACCATTATT
GAAAAAGTCACGGGGTCGTATCGTCAATGTGACAAGCATGGGAGATGGAG
GCTTTAGACTTTTCTTGCGAAAACAAATTTATTAGTTTTTCTGTTATCCT
AATTTTTATATATTACCTGATTAATTTCATTGTGGATCATTGGATTTCAA
CCGAAGAGAAGAAAAATGTTTTGGTGACAGGCTGTGATTCAGGTTTTGGT
TTCCAAACAGCTTTAGAATTAAGTGAATCTAATTGTAAAGTTTTTGCTGG
TTGTTTAACTCAAGATGGTGTCAAACGACTTGAGAGCAATGCCAGGTTTC
GAGGGATGGCTTTTATCATGGACGTGACTAAAGACGAGGATGTTCAGAAA
GCAAAGGAGGTCATTGAAGAGAATGGAGTTGTGGATGGTGTTTTGAAAAG
TATAAAGTATGGCGATGACATATCAGAGGTTTCTGGCAAAATCAGACATG
CAATGTTGGCACGTTTTCCAAGAAGACGTTACATTGTAGGGAAAGATTCG
ATTGTTTTTGCCATTATAACGCATCTTCCGACAGTTGTTGGTGATTGGAT
TTTCTCGAATATGGCACCTTTGCTTCGACCAAAGAAAACAGTGGAGTAGG
CGTTTTCTGATAGCTTACGTCTCGAAGTCAAACCATGGGGTGTTTCTGTG
CATTTAATCGAACCCACGTACTACAAAACTAATTTGGCTGGTACAAAAGA
GCTAAAGAAAGTTTGGTTTAATATTTGGGATCAACTACCACAAGAAACAC
ATGATGAATTTGGAAAAGAACCTTTCGAGAATTGACGACTCTCACCACCC
TACACTGCCCCTTATTACGGTTCAAAATATGCAGCTGAACTTTGGACGGT
ATAGTTAACAATGCTGGTATCGCTATTCATGGATTGATCGAATGGCAATC
TATCGAATTGATGAAGAAAACATTCGAAGTGAATTATTGGGGAACTGTTC
GTGTTACCAAAGTCATGCTACCATTATTGAAAAAGTCACGGGGTCGTATC
GTCAATGTGACAAGCATGGGAGATGGAGGCTTTAGACTTTTCTTGCGAAA
ACAAATTTATTAGTTTTTCTGTTATCCTAATTTTTATATATTACCTGATT
AATTTCATTGTGGATCATTGGATTTCAACCGAAGAGAAGAAAAATGTTTT
GGTGACAGGCTGTGATTCAGGTTTTGGTTTCCAAACAGCTTTAGAATTAA
GTGAATCTAATTGTAAAGTTTTTGCTGGTTGTTTAACTCAAGATGGTGTC
AAACGACTTGAGAGCAATGCCAGGTTTCGAGGGATGGCTTTTATCATGGA
CGTGACTAAAGACGAGGATGTTCAGAAAGCAAAGGAGGTCATTGAAGAGA
ATGGAGTTGTGGATGGTGTTTTGAAAAGTATAAAGTATGGCGATGACATA
TCAGAGGTTTCTGGCAAAATCAGACATGCAATGTTGGCACGTTTTCCAAG
AAGACGTTACATTGTAGGGAAAGATTCGATTGTTTTTGCCATTATAACGC
ATCTTCCGACAGTTGTTGGTGATTGGATTTTCTCGAATATGGCACCTTTG
CTTCGACCAAAGAAAACAGTGGAGTAGGCGTTTTCTGATAGCTTACGTCT
CGAAGTCAAACCATGGGGTGTTTCTGTGCATTTAATCGAACCCACGTACT
ACAAAACTAATTTGGCTGGTACAAAAGAGCTAAAGAAAGTTTGGTTTAAT
ATTTGGGATCAACTACCACAAGAAACACATGATGAATTTGGAAAAGAACC
TTTCGAGAATTGACGACTCTCACCACCCTACACTGCCCCTTATTACGGTT
CAAAATATGCAGCTGAACTTTGGACGGTATAGTTAACAATGCTGGTATCG
CTATTCATGGATTGATCGAATGGCAATCTATCGAATTGATGAAGAAAACA
TTCGAAGTGAATTATTGGGGAACTGTTCGTGTTACCAAAGTCATGCTACC
ATTATTGAAAAAGTCACGGGGTCGTATCGTCAATGTGACAAGCATGGGAG
ATGGAGGCTTTAGACTTTTCTTGCGAAAACAAATTTATTAGTTTTTCTGT
TATCCTAATTTTTATATATTACCTGATTAATTTCATTGTGGATCATTGGA
TTTCAACCGAAGAGAAGAAAAATGTTTTGGTGACAGGCTGTGATTCAGGT
TTTGGTTTCCAAACAGCTTTAGAATTAAGTGAATCTAATTGTAAAGTTTT
TGCTGGTTGTTTAACTCAAGATGGTGTCAAACGACTTGAGAGCAATGCCA
GGTTTCGAGGGATGGCTTTTATCATGGACGTGACTAAAGACGAGGATGTT
CAGAAAGCAAAGGAGGTCATTGAAGAGAATGGAGTTGTGGATGGTGTTTT
GAAAAGTATAAAGTATGGCGATGACATATCAGAGGTTTCTGGCAAAATCA
GACATGCAATGTTGGCACGTTTTCCAAGAAGACGTTACATTGTAGGGAAA
GATTCGATTGTTTTTGCCATTATAACGCATCTTCCGACAGTTGTTGGTGA
TTGGATTTTCTCGAATATGGCACCTTTGCTTCGACCAAAGAAAACAGTGG
AGTAGGCGTTTTCTGATAGCTTACGTCTCGAAGTCAAACCATGGGGTGTT
TCTGTGCATTTAATCGAACCCACGTACTACAAAACTAATTTGGCTGGTAC
AAAAGAGCTAAAGAAAGTTTGGTTTAATATTTGGGATCAACTACCACAAG
AAACACATGATGAATTTGGAAAAGAACCTTTCGAGAATTGACGACTCTCA
CCACCCTACACTGCCCCTTATTACGGTTCAAAATATGCAGCTGAACTTTG
GACGGTATAGTTAACAATGCTGGTATCGCTATTCATGGATTGATCGAATG
GCAATCTATCGAATTGATGAAGAAAACATTCGAAGTGAATTATTGGGGAA
CTGTTCGTGTTACCAAAGTCATGCTACCATTATTGAAAAAGTCACGGGGT
CGTATCGTCAATGTGACAAGCATGGGAGATGGAGGCTTTAGACTTTTCTT
GCGAAAACAAATTTATTAGTTTTTCTGTTATCCTAATTTTTATATATTAC
CTGATTAATTTCATTGTGGATCATTGGATTTCAACCGAAGAGAAGAAAAA
TGTTTTGGTGACAGGCTGTGATTCAGGTTTTGGTTTCCAAACAGCTTTAG
AATTAAGTGAATCTAATTGTAAAGTTTTTGCTGGTTGTTTAACTCAAGAT
GGTGTCAAACGACTTGAGAGCAATGCCAGGTTTCGAGGGATGGCTTTTAT
CATGGACGTGACTAAAGACGAGGATGTTCAGAAAGCAAAGGAGGTCATTG
AAGAGAATGGAGTTGTGGATGGTGTTTTGAAAAGTATAAAGTATGGCGAT
GACATATCAGAGGTTTCTGGCAAAATCAGACATGCAATGTTGGCACGTTT
TCCAAGAAGACGTTACATTGTAGGGAAAGATTCGATTGTTTTTGCCATTA
TAACGCATCTTCCGACAGTTGTTGGTGATTGGATTTTCTCGAATATGGCA
CCTTTGCTTCGACCAAAGAAAACAGTGGAGTAGGCGTTTTCTGATAGCTT
ACGTCTCGAAGTCAAACCATGGGGTGTTTCTGTGCATTTAATCGAACCCA
CGTACTACAAAACTAATTTGGCTGGTACAAAAGAGCTAAAGAAAGTTTGG
TTTAATATTTGGGATCAACTACCACAAGAAACACATGATGAATTTGGAAA
AGAACCTTTCGAGAATTGACGACTCTCACCACCCTACACTGCCCCTTATT
ACGGTTCAAAATATGCAGCTGAACTTTGGACGGTATAGTTAACAATGCTG
GTATCGCTATTCATGGATTGATCGAATGGCAATCTATCGAATTGATGAAG
AAAACATTCGAAGTGAATTATTGGGGAACTGTTCGTGTTACCAAAGTCAT
GCTACCATTATTGAAAAAGTCACGGGGTCGTATCGTCAATGTGACAAGCA
TGGGAGATGGAGGCTTTAGACTTTTCTTGCGAAAACAAATTTATTAGTTT
TTCTGTTATCCTAATTTTTATATATTACCTGATTAATTTCATTGTGGATC
ATTGGATTTCAACCGAAGAGAAGAAAAATGTTTTGGTGACAGGCTGTGAT
TCAGGTTTTGGTTTCCAAACAGCTTTAGAATTAAGTGAATCTAATTGTAA
AGTTTTTGCTGGTTGTTTAACTCAAGATGGTGTCAAACGACTTGAGAGCA
ATGCCAGGTTTCGAGGGATGGCTTTTATCATGGACGTGACTAAAGACGAG
GATGTTCAGAAAGCAAAGGAGGTCATTGAAGAGAATGGAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_031146	XLOC_031146	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00049036-protein	TCONS_00049036-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_15	supercontig	scaffold_15:496993..508203 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0.42313	0.140523	4.79395	3.42021	4.69876	4.09794	5.99503	3.64275	6.65906	4.83063	2.56477	2.03888	3.52963	4.90164	3.06692	2.90511	5.00487	3.0258	12.9936	8.67704

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR002347	SDR_fam
IPR016040	NAD(P)-bd_dom

Blast

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BLAST of TCONS_00049036 vs. Swiss-Prot (Human)
Match: DR9C7 (Short-chain dehydrogenase/reductase family 9C member 7 OS=Homo sapiens GN=SDR9C7 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.879e-52
Identity = 105/292 (35.96%), Postives = 172/292 (58.90%), Query Frame = 3

Query:  171 KKNVLVTGCDSGFGFQTALELSESNCKVFAGCLTQDGVKRLESNARFRGMAFIMDVTKDEDVQKAKEVIEENGALDGI---VNNAGIAI-HGLIEWQSIELMKKTFEVNYWGTVRVTKVMLPLLKKSRGRIVNVTSMGGRLSPPYTAPYYGSKYAAEAFSDSLRLEVKPWGVSVHLIEPTYYKTNLAGTKELKKVWFNIWDQLPQETHDEFGKEPFENFVDGVLKSIKYGDD-ISEVSGKIRHAMLARFPRRRYIVGKDS-IVFAIITHLPTVVGDWIFSNMAPLLRPKKTV 1028
            +K V +TGCDSGFG   A +L +   +V A C T++G ++L+ +  +R    ++DVTK E ++ A + + +     G+   VNNAG+ +  G  EW + +   K   VN  G + VT  MLP++K++RGR+VN++S GGR++      Y  SK+  EAFSDS+R E+  +GV V +IEP  Y+T + G + L+     +W++LPQET D +G++ F  + D +   ++  +  + +V   + HA+++R PR RY  G D+ +++  +  LPT V D+I S   P  RP  +V
Sbjct:   25 EKYVFITGCDSGFGNLLAKQLVDRGMQVLAACFTEEGSQKLQRDTSYRLQTTLLDVTKSESIKAAAQWVRDKVGEQGLWALVNNAGVGLPSGPNEWLTKDDFVKVINVNLVGLIEVTLHMLPMVKRARGRVVNMSSSGGRVAV-IGGGYCVSKFGVEAFSDSIRRELYYFGVKVCIIEPGNYRTAILGKENLESRMRKLWERLPQETRDSYGEDYFRIYTDKLKNIMQVAEPRVRDVINSMEHAIVSRSPRIRYNPGLDAKLLYIPLAKLPTPVTDFILSRYLP--RPADSV 313

The following BLAST results are available for this feature:

BLAST of TCONS_00049036 vs. Swiss-Prot (Human)

BLAST of TCONS_00049036 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DR9C7	1.879e-52	35.96	Short-chain dehydrogenase/reductase family 9C memb...	[more]

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TCONS_00049036 (transcript) - C. hemisphaerica