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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049040 ID=TCONS_00049040|Name=TCONS_00049040|organism=Clytia hemisphaerica|type=transcript|length=1297bp
gggaaatttattCGGAAAATcatcggaaaatcggggaaatttctttcaaa
tatcaaaccagacggtactaatcgaatgttccgaacgttcgattgtaatc
gataataatcgaataTAATCGAACGTCATCGAATGATGACTTATCGATTA
CgccgaaattttgaaataatcgAATACTCACCAGCCTCAGAATATCTGCA
TCTTCTTCGATTACCGTTCGATGAACGTTTGATGACCCTTCGATGACtct
tcgattaattcgattactCTTCGATTAATTCGATATACTATCGGTTTGTA
AGATTTATTAGATTACTTCGATTACCATTCGATTACCATTCGATTACTTC
GACTAGTCATGGAAGGCTTCGATCTCTTTATTCCCTCGTTTATTTcaaca
gaaaattttaatcGAACCAGGCCGTACGTTGTACTGTGCACACGGGAGAG
CCTGGGTAGGGCGAAATCGTACTCtaataacccagctggcacgttgtttc
aacgtttatctaacgtccatataacgttagatggacgttaaaacaacgtt
gtgtgtctgCTGGGAACGGATCATTCTGCACACACCCGTGCTCCGTTCTG
CGAATGTGGGATCTGATCTGGTTGACCGCGTTAATTTTGCGTTGAAAGGA
AGGTGTAAAAATTACACAGAAGTTAAACAGAAAATTGATAAAGAATAAAG
ATTTCCTGAGAATCAACCCCTGCACTCTTCTCCACGTTCTCTAGTGAAGC
ACCTTTGCACTACTCTTACTTTGCGACGTGACTGCCGTTCTGACCTGAGC
GACGACTCGAACCTGATGATAGTCATAGTTTTGATTCTAGAGTTTTTCAA
CTtgattctttcatttttcttgggTTTTTGACTATAACTTGAGTCACAAT
CTTTGTCTATTTCAGGGCCGTGATATGATTTCAACTCCTTTTTAATTCGA
TACTTAACGCAACAGCTATTTTTGGGTTCTTACCCGTATCTCTTCTACAC
AAAATaaggtttcaatattttttttccgtTTTAGGTAACTTGGTAGCTCA
AAAAACATTAGTATCGGCATGTATATAGACTGAGCGACTGAGAAGAATGG
AAATTGACAGGTACAACCACCGAAAACACAGTAAACAAACTATCGTACTT
ACCTATTATAAGTTCAACAATACAGTAGTTCCCTTACAatccaaaatcgc
aaaaattcaGATAGCTGGGGTAAAGCCACGATTTTACAACTTTGGCGCTT
TTAATTGTTAAGGGAACTATTGGATTGTACTTCGAAAAATTACCGTA Run BLAST on NCBI transcript from alignment at scaffold_15:14694..15990 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049040 ID=TCONS_00049040|Name=TCONS_00049040|organism=Clytia hemisphaerica|type=transcript|length=1297bp|location=Sequence derived from alignment at scaffold_15:14694..15990 (Clytia hemisphaerica)
TACGGTAATTTTTCGAAGTACAATCCAATAGTTCCCTTAACAATTAAAAG
CGCCAAAGTTGTAAAATCGTGGCTTTACCCCAGCTATCtgaatttttgcg
attttggatTGTAAGGGAACTACTGTATTGTTGAACTTATAATAGGTAAG
TACGATAGTTTGTTTACTGTGTTTTCGGTGGTTGTACCTGTCAATTTCCA
TTCTTCTCAGTCGCTCAGTCTATATACATGCCGATACTAATGTTTTTTGA
GCTACCAAGTTACCTAAAacggaaaaaaaatattgaaaccttATTTTGTG
TAGAAGAGATACGGGTAAGAACCCAAAAATAGCTGTTGCGTTAAGTATCG
AATTAAAAAGGAGTTGAAATCATATCACGGCCCTGAAATAGACAAAGATT
GTGACTCAAGTTATAGTCAAAAAcccaagaaaaatgaaagaatcaAGTTG
AAAAACTCTAGAATCAAAACTATGACTATCATCAGGTTCGAGTCGTCGCT
CAGGTCAGAACGGCAGTCACGTCGCAAAGTAAGAGTAGTGCAAAGGTGCT
TCACTAGAGAACGTGGAGAAGAGTGCAGGGGTTGATTCTCAGGAAATCTT
TATTCTTTATCAATTTTCTGTTTAACTTCTGTGTAATTTTTACACCTTCC
TTTCAACGCAAAATTAACGCGGTCAACCAGATCAGATCCCACATTCGCAG
AACGGAGCACGGGTGTGTGCAGAATGATCCGTTCCCAGcagacacacaac
gttgttttaacgtccatctaacgttatatggacgttagataaacgttgaa
acaacgtgccagctgggttattaGAGTACGATTTCGCCCTACCCAGGCTC
TCCCGTGTGCACAGTACAACGTACGGCCTGGTTCgattaaaattttctgt
tgAAATAAACGAGGGAATAAAGAGATCGAAGCCTTCCATGACTAGTCGAA
GTAATCGAATGGTAATCGAATGGTAATCGAAGTAATCTAATAAATCTTAC
AAACCGATAGTATATCGAATTAATCGAAGagtaatcgaattaatcgaaga
GTCATCGAAGGGTCATCAAACGTTCATCGAACGGTAATCGAAGAAGATGC
AGATATTCTGAGGCTGGTGAGTATTcgattatttcaaaatttcggcGTAA
TCGATAAGTCATCATTCGATGACGTTCGATTAtattcgattattatcgat
tacaatcgaacgttcggaacattcgattagtaccgtctggtttgatattt
gaaagaaatttccccgattttccgatgATTTTCCGaataaatttccc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049040-exon-scaffold_15-1491911889:14694..15990 | TCONS_00049040-exon-scaffold_15-1491911889:14694..15990 | Clytia hemisphaerica | exon |
| TCONS_00049040-exon-scaffold_15-1510915933:14694..15990 | TCONS_00049040-exon-scaffold_15-1510915933:14694..15990 | Clytia hemisphaerica | exon |
| TCONS_00049040-exon-scaffold_15-1575043694:14694..15990 | TCONS_00049040-exon-scaffold_15-1575043694:14694..15990 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_15 | supercontig | scaffold_15:14694..15990 . |
Blast
The following BLAST results are available for this feature:
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