TCONS_00049126 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049126
Unique NameTCONS_00049126
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5092

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049126 ID=TCONS_00049126|Name=TCONS_00049126|organism=Clytia hemisphaerica|type=transcript|length=5092bp
aaacttgaaaactctTCTGGAGCTGCTAGCCTGTGTGAGTGTGATTTCTC
AACACGCACGCAACAGAAAGTGTctattcattttcatttcatggGAGTAA
GATAACAATTATAATGTTAAAAACTGAAATTATCATCCCATGTTATTTGT
ATTTTAGTGAAAGCAGTAAGTTTAACATAGCATAAAATGGATAAAAGAAt
gaacttaaaattttttacCGGTAAATTGGCAACTTCTACAATTTTTTCTG
GTTGAAGGTTCACTTCAAAATCAAACCCTCCTTTCTGAGAGTCATCAACT
GCATACTGAGAATTATCTTCTGACTTCCCTTCGTCGATAAAATTGTTCTC
CGGACTGGCTTTTGTCAAAAGAGAATCGCCTTCGAGAGACTGAAGTGCAT
CTGTGAGAGCGTCCGCCATTTTCTTCAACTTTCTTGCCCTTGTCGATGGT
TGTGGGCACACTTACTGTTTATTCTTATGGTCTCTTTGCTCAGACATTCT
TTTGTACGTGGAGCCAGCgaaacttttttcgcaaatgaaaaattggaaaa
cggCGCTTGTATTATTAGCCAGTAGATGCTTGATTTAAAATATCACAAAG
TGAAATCTAAACGAAAAGCAGAAATTGTTGGAAGCTGGCTAAAAGACCCC
CAGCAATGAAGCCCGTAATTGCAAAAGGTTCCATCCACACGAGCAGGAAA
GAAATATCAAAGTTGGGACTAAAAGAAGGCTGACTGGACTGCAAAACAGG
CAATTCAGCTGAAAATTGGGCCGCTGCAGCAGCACTATGGGCTCAGCAAC
GACAAATGCAAGATCAGTATCCACAAAGTGGAGGAGAGAGACCACCAGAA
CCCCCAGGTCCTCCCCCAGATGCTCCATCCCTACCTAATGATCAAAATGA
GAACAAAGTTGAGGTTCATGATTACAACCATGGAGCAGCAAATGAACAGA
CTCAAGTGTTTGATTACCAACACCAAAATGCACCAGCCGAACCACAACCA
CCTCCAGACTCTAATGTCATTGATTATAATCACGGAAAATCAGAGATGCC
ACCTGTAGATCAATACCAGTATAATAATTGGGACTACAATCAGCAGAACT
GGCAAGATCCAGCAGTTTATCAACAACAGCAACAGCAGTGGGCTGACTGG
AATCAACAGCAACACAATCAACACAATGACAATCATCATAACCATGAACA
AAATGGTGGCAACTTTCATCACCAGCAGGATTATGATCAAAATGACGGAC
GTAGTAGGGACCGTAATCACACTCATCATAATCATGGGTATAGCGACCAA
TCAGGAAATAATACACCGGATCCTGTTGAGATGAAGAAGAAATCTTTGCC
TCTGTGGTTGAGGGATGGTCTTGAGAAATTggaaaagaacaaacaaaaac
aagagaagAAAGTCATTCCGAGTGCTAAGAGCATCTCAGGATATCAACAT
GGTTCACCAACATCTTCGCCGGAAAAAGAGGAGAGTGATGCAGAACTAAG
CGACAAAAGTGATAATGAAGGGACATCGTCCCCAGTGAAACATCCACTAT
CCCCTCCAGCTCGTCGTCAAAAACATTCATCATCTGAAGACGAAGAAATT
TCTGAAGAGGAGAAACAGCGCAGAACTatgttgaaaataaaaacttggAT
GACAGAAACCCTCTTAAAGGTTACAAATTCTGAGTTAACGAATGTTTGTG
AAGAGGTTTTCTTTGAGATGAAACGATCAGCAAAGAACAAGGCAACCAAT
GTTCGACGTTCTGGAGGTTTGGAGTCTCTCCGTTCGATAGGTGAAGATGA
CGTCACGAGTAGTGAAGAGGAAGAAGAACCAATCAAACCTCCTCCACGAA
AATCTCGTTTCGATGAAAAACCATCTTCGTTACCAAGGAAACCAAAAGCA
ACAACAGACGAGGAGGATACATCTCCCGCCCAAAAACCTACCAAAGCTGA
ACACGACATTAGGAAAGATGTACCTGTTGTCATTTCAAAGGACTCTAAAA
TTAAAGATAAGAGCGAGAAACGTAACAACGAGGAGAAAACGAGTAAACGC
AAAGACGTTGATAAGAAAAAGAGCCCGCAACATAAGagttccaaaaagaa
aaagaagaggaaATATTCGGACAGTGAGTCGGACAGATCGGACGATTCGT
ATTACAGTTCGGACGAAGAAAGTGATCATAAGAAAAGTCGTAGTAAGAAA
TCTTCTAAACGCCACCGCTCGGACAGTCGTTCGCCCGTGCGTAAAAGTCG
AAAGAAATCGAAATACGACTCGGATGATAGCGATCATTACGAAGAGAAAC
GaagcaagaaaaagaagaaaaaggaaCGCTATTCATCGGACGAGGAAAGT
TATGATAGTGATTATTCTTCTCAACGtaagaaaaaatccaagggtAAGAA
GCATAAACAAAGAGACCGATCTATATCCAGGTCACCGAAGCGCTCGAAGA
AGAAAAAGTGACCCATGTGATAGGTAAGTTAGGCTATTACTTGCAGAGTG
CAGTTTGGGTTGAACTGACTAGACTTTCTTTAAAAGGTGATCAGGAACCA
CTGCTAGTGCTCAGGTTATCGGATCGTGGCAGCATGGAGGATATATATAC
AGAGATAAAGATTTATCCCAAAAACGACATtctttgaaactttcaaacgG
GACATTCAGTGATTATAGAATATTATGaacattttttagattttttcttt
aattttgtaaaatttgtacaAAGAAGGTGAAAGGaaagaatatttttacc
aatttatATCCATTTGTGTTTACGTTCTTCTTACaaatattgaaaaggaa
aattgaCAACTTCCAATTCTTCAGAATTCGAACAAGtttgaagaaattga
ttttcgGATATTCTAGAATAAAACATCTCTACAAAAACTTTCGATTTTGG
ATTGTTTATTTCGACAACAATTTACAATAaattataaagcaatagattaG
TATTTAAATATATTAGTATCTGTTCATTATAACATTATTTTTGCTTCTGC
TGCCTGCTACGGCACGGAACCAAATCTTGTAGTAGTAGCGATTATTGTGA
TACACTCTCAGTGTCTTTGTGTTCTCACTGTTCCCCAGCTCCATATGTTC
TAATGACGTCACGGATAGGTGCTCGGCACATGGGGCAAGTCTGTCCGTTC
ATTTTCAAATGTAATGCACAAGAGTGACATGCGCACATGTGTCCACATTG
ATAGAAAACTGTATCAATTGATTGGTCGATGCAAATAGCACATTGTCCTC
TCTGGACAGGTGTTGTGTGGTTGTTTTGTTGAATGTTCAGGATGGCACTT
GACGTTGGACGATCTTGTTGGTCTAAAACAGAATGCAAATTTGTATTAAG
AGTTATGTTACCGAATACTTCCAGTAACATCTGTGCAATTCAGCCCGACA
GAAAGAATTCAATAATATTGGGTTGGTACGATGATGATAATAGTAGTAAG
ATTAATTTACGTTGGAAAATTGTTGCGAATTCTGTGTTTAAGGTTCAAAA
ACCGTAGATAACTTCTTTCATTGAAGAAACTTACCTGGTTTACTAGCGAG
ATAGTCGCTCATGAAAGCCTGAAAGACAGCTGCAACTTCTTGTCTAACAG
CGCGTTGAGTATCAAGTTGTACTTCCATCGTCATTCGAAGAAGTTGTTTC
ATTTCGTTCAGTTCTTGTTTAAGCTCTTGAATCTCGTGTGGTGAGCTGGC
TCCTCTTTCGTTGATTGTTCTTAATGACGTTGGGCGTTGAATCGGAGGAC
GTTGTCTTGGTTGTTGAGAGCGAACGAATGGGCGTGGCGTTGTGGTGTTT
CCACCTAATGACTCCACACGTTGCTGAAATAGGCAAACTTAATTAATAAc
taaattttcaaacttgattttTGTATGTCACGCTTTGATTAACTTGGTTG
GTTTTTTAAAAGCAGAAAAAATGTCTTAGATTAATGTAATTGTAATTTCG
AAAGGTTTGGATGTTAAGATTCTTACCTGAACCATATTCTCCAATTCATC
ACGGAAATCGTCTTGTAGCATATTACTGACAACTTGTAGACTTTGTAGAC
GAGTGATGTCAGTAGCTATGCTTTCTGTTAAGATTTGTACACTTGCTTGC
ACTGTTGATTGAAGTAATGCTGGATCAACCAAAGGCGTTGTCGAAGGTGT
GGATGTCCCAGGTAATGGTGGTGGCGGTGGCGGGTTCGATGTTCGGCTGG
CGGGAGTAGATTCTTGAGGTTGTACActgtaaaataaatattaataatGT
CGAATGACATTTAAGTATCTTAGcaacaaaactttgaaaacaagAACCAA
GGCGATTTTATGCATTTAGAGAAGTGTAtattaaaatatctttcttgGGA
AATTTAACCCAGCGCATAGAGAAGTCATCTGTAAGTTAATTAGAGAGTTT
TTTTTACCTTGACTGTTGTCTTTGTTGTCGTTGAGCGATCTGTCTACTGA
GTTGGTCTCGGAAAGATCCTCGTGCTGGTTCCGTTCGATTATTGTCATAC
CTTCTTGGGACGGGTCTTCTAGTCCCTCTTGTATTGCTGTTTGAGCTTCT
TGCTGTTGGTGCAGTAGACCGTCCACTTAATGTCGCTTCAAGCTGACGTC
GAAATCCATTTTGTATCGCGGAGCTTACTCTGCTAAGTTGTAGAAGGGAT
TGGACGTCATTTGCGACTGTTTCAGGTCTGTTTTGAGCTTCTTCTTCGGC
CCTTTCTTGTTGCGTTGGCNTGTTTCAGGTCTGTTTTGAGCTTCTTCTTC
CGCCCTTTCTTGTTGTGTTGGACCATTGATTGCACGCTCAAAGAAGTTCT
CGATACTAGCTCTCGCATTACCCCCTGTTACTGGTCGCTCTCCAAGTTGG
ATTCTTCTAAGTTCTAAAAATCTTTCACTGTaaagaaaaaatagatttta
tgattgattcggaaattttcgaaatatttaTCACGCCTTTTTTCCTTTTC
GTTATGATCGAATAAGATAATATATAACTAGCGGTCCCAGACCTTTAACT
GATTAAAATGATAAATCATATTTAGGACCTTCAAATCCGTTGGGAAAGTA
TCATTTACTCATACTTCTAATATCTTTCATCGTGGAATAACT
Run BLAST on NCBI

transcript from alignment at scaffold_152:97885..109987-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049126 ID=TCONS_00049126|Name=TCONS_00049126|organism=Clytia hemisphaerica|type=transcript|length=12103bp|location=Sequence derived from alignment at scaffold_152:97885..109987- (Clytia hemisphaerica)
AAACTTGAAAACTCTTCTGGAGCTGCTAGCCTGTGTGAGTGTGATTTCTC
AACACGCACGCAACAGAAAGTGTCTATTCATTTTCATTTCATGGGAGTAA
GATAACAATTATAATGTTAAAAACTGAAATTATCATCCCATGTTATTTGT
ATTTTAGTGAAAGCAGTAAGTTTAACATAGCATAAAATGGATAAAAGAAT
GAACTTAAAATTTTTTACCGGTAAATTGGCAACTTCTACAATTTTTTCTG
GTTGAAGGTTCACTTCAAAATCAAACCCTCCTTTCTGAGAGTCATCAACT
GCATACTGAGAATTATCTTCTGACTTCCCTTCGTCGATAAAATTGTTCTC
CGGACTGGCTTTTGTCAAAAGAGAATCGCCTTCGAGAGACTGAAGTGCAT
CTGTGAGAGCGTCCGCCATTTTCTTCAACTTTCTTGCCCTTGTCGATGGT
TGTGGGCACACTTACTGTTTATTCTTATGGTCTCTTTGCTCAGACATTCT
TTTGTACGTGGAGCCAGCGAAACTTTTTTCGCAAATGAAAAATTGGAAAA
CGGCGCTTGTATTATTAGCCAGTAGATGCTTGATTTAAAATATCACAAAG
TGAAATCTAAACGAAAAGCAGAAATTGTTGGAAGCTGGCTAAAAGACCCC
CAGCAATGAAGCCCGTAATTGCAAAAGGTTCCATCCACACGAGCAGGAAA
GAAATATCAAAGTTGGGACTAAAAGAAGGCTGACTGGACTGCAAAACAGG
TATACCTATGTCATATTTATTTGAATTGATTAGAAATATAATATCCCCTT
AATGAATCCATAGGTATCTTGCCAACTGTTTCCACGAATATTATTGCCAA
AAAAAAAAAAAGAAACATATTAGTCATAACCATCTATAATCAATCAATAT
CATCCACCAGACGATATCACCTACCAGGATTTTCAATCTGCGGACCTAGG
CTGGGGCTCGGTTATTATCAGTTAGGGTTAGGGTTGGTGGCTGGAGCTTG
AAAGTCATAATAGTCAGGCGTAGAAACTTTCGCGAGCTGAAACTTTCGCG
ATTTTCGCGAATTTTGGCCCTTTTCGCGAAAGTAAATACACGTCTTTAAA
AATTCTAGGAAGGGCCATTCGCCAAAGTTTATGCTCGCGAAAAATTCTTG
ACAAAATAGAAAATCTGTAAAACTTCAAACTTTGAATAAAATGTAACTTT
TATGGCACTTTTTAGCCTGCTAAAAGACTAATAAGTCAAAGGACAAATGT
TTCAAGCCAACCCAAGAAGTATATGTGTATATGTCTCTAAGCCATTTTTT
CATGTGAAAATTCTCAATTTTATGTCTTGATTCGTGAAAGTTTATGCTCG
CAAAAAATATTTTTCGTTAAATTCGCGAAAGTAAATGTCGTGAATTTCGC
GATTTTTCGTCCTCGCAAAAGTTTCTCCTCGAGAAAGTTTGTACGCTTAA
AGTAGACCTTTTCGCCTTTCCATCCGCCATCTTGAATTGTATGCAAAAAT
TATGGTGGCTGAATTGCCGTGGTTAAATACCCTTAGAAAGTATGCAAAAC
GTATGCAAAAAGAAGGTATTAATATAAAAAAAACTTACATGCATAATTGG
CATTATATTAAAGTGTAATCTTGTAGAAGAAAGATTAAATTTGCTTCTTT
TGAAAACTAGAAATTATCAAATTCGCTCATCTCTTAGAAGAAGCACTTCA
AAAAAACATAACATTAGACATAAACTCAAGCTGAAAAATCACCCGCAAAG
GTACAAATATAATCCTTATTCAGCTGACGGTAAATTATTCTCCTGGGAAT
GGAACCGCCCAAATGGATCAAATCAAAACATTGTGACGTCATAATTACTG
CTTTCAGATTGCAATTTAATCAGGATAGAAGATAGGAAATAGAAAATACG
GGGGAAATAAGAGAGGATGCATCCTGGTGGATGATATTGTTTGCCAGCCG
TGCTGGTGGGATTTTAGATTCAAGTGTCCCGCATCTTTTTTTATGCCGTC
AGTGATTTGTTATGCAGTTATGGTAAATTATGGCTGTTATTCATTAGATT
GTCACCTTCCCCGCCTAAAGATGTATTCATGGTATTTTCAAAACAATAAC
TGTGAAAAAAACTATCAGTCAATATTTTTAAGTTTTTGTAGCGCATTTTA
TAGCTCTTTTTGGCCTGATTCAAGGTACACTTGAAATCAGTGCTTATAAA
TAGGAATAATCAGAAAACACCTACCGTCAAAATAGGCCTCTTACTTATCA
GGATGTCATGTTCAATAGTTGAACAATTCAACCTTAAAGTAATGACACAT
CAATGCATAATTATCATAGTGTGCACCATTTTTTTTCTTATCATTGTTTT
GATGCTGTAGTTTTTTGATTATTCAACATGACATATCATGATTTGCAAAA
TGTCTATTGGAGCAGGGGGGGCACCACAGTGGGCCCAGAGGTGGAAATAG
GGAAAAAACGAAAGTTAAAATTTTGCTTTATTAATATAATTTATGGAATC
TTGAATAAATTTCTGATCAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTTTGAAAACTACAGACACTAACCTTTCTAAAAATGCTGGAGTTTTGAT
GTGACACTTAGCGGTTTAAAAGTTCAAATTTTGCCTGCATTTTCCAAGCT
AAAAAACTCAATTTTCATGATAAATCTCAAAAGAAAGTCAAAAGTTGAAG
TCTACTATGTTCTATCTCATGTAATGTGACCCTAGAGCTCTATGAAAGCC
TTTATAATACAAAAATTGTAAGAAATAGTTTTTTGTTGCTCTCCCTCTCC
CTATTTCCAAACTTTTGCCATCTGGGCCCAGTGTGGGCACGCAGTTACTA
CAAGACAGTATGACACTTACTACCGTGGTGGTACTGTATTCACAAAAAAT
TTGTTAAAAAAAATATTTTTGTTATAAATGGACGAAAATTTTTTTTTTTC
TCAGACCCAACTTTGAAATTATGCTTTCCCTAATTATCATTAAAATGTTC
TCAACAGCTGTTAACCAAGTAAATTAAAAGAAAATCTAGCACAAAAATGG
CTTTAGGTTGAAAAATAATCGCAATTTAGGGTAATTTCGAGCATGTTTTT
GATGATATCACTCAAAAAAAGGGGTGGTACCTGGAAATCTTTTCTGAAAA
CAGTTACTACCAAGGTGTAATAACTGCAAAGGGTGGTGGTCCTGAAAAAA
AAGTGCTGAAAAAGCATTTACATCATGTCTTGTAGTAACTGCGTGCCCCC
CTGATTGGAGTTACTTTCATAAGCAAACGGTAACTTTCATAGCCTTCAAT
AGTTGGCACTAACTTTTGGTCTGTAATTTAGAAATTACACAATTAGTTTG
CTAGATTATGATATAAGTAAGTTATGTTCTGGCTTTCTGACTTATAGATA
AGTCAGGAACCAGAAATATTTGTGATTTAGAGGCTTTAAAATTTGCTACA
CAGAGTAACCCCAAATCATGGTATACTATAAGTTAAAAAAAGAATAGAAT
GGTTTAAGAATAACTCAGCTGAATACTAAAATAAAATTTATGTTTTTCTC
TTTTTCTTTCTAGGTAATGTTGGTTACTGTTATTTTTTGAATCATTTGTG
ATTGGATTTATTTTTGTGTTATTTTGTGTAAAGGTCTGAGCTTTAGTTTT
AAGCATAGACACATAAGTATGTGGCAACAGAATCCAGGTTGGGGCTGGCC
ACCTAATCAATATAATCAGTATTCTCAACAACAAGGTATGTATTTAAAGT
TAAACATTGATGATATTGTTTTATTTCAATAAAGATCTTTGGATATCAAA
CTATAAATTGTTTTTCGTTTCTTTCAGGCAATTCAGCTGAAAATTGGGCC
GCTGCAGCAGCACTATGGGCTCAGCAACGACAAATGCAAGATCAGTATCC
ACAAAGTGGAGGAGAGAGACCACCAGAACCCCCAGGTCCTCCCCCAGATG
CTCCATCCCTACCTAATGATCAAAATGAGAACAAAGTTGAGGTTCATGAT
TACAACCATGGAGCAGCAAATGAACAGACTCAAGTGTTTGATTACCAACA
CCAAAATGCACCAGCCGAACCACAACCACCTCCAGACTCTAATGTCATTG
ATTATAATCACGGAAAATCAGAGATGCCACCTGTAGATCAATACCAGTAT
AATAATTGGGACTACAATCAGCAGAACTGGCAAGATCCAGCAGTTTATCA
ACAACAGCAACAGCAGTGGGCTGACTGGAATCAACAGCAACACAATCAAC
ACAATGACAATCATCATAACCATGAACAAAATGGTGGCAACTTTCATCAC
CAGCAGGATTATGATCAAAATGACGGACGTAGTAGGGACCGTAATCACAC
TCATCATAATCATGGGTATAGCGACCAATCAGGAAATAATACACCGGGTA
AGTTGTCAGTTAAAGATAAAACAAAAAAATGCGTAGTAGCTTTTTTCTCT
TCTAGACAAAAGATTAGCTGGGATTTCTGTTTTGGTAACAATTCAAAAAA
TACAATCAAAATGTTAAAAAAATGCCCATCAATTTAATAATGAGTGAAAG
TCAGGAAATTTTGTAAGGTTGTATTGTAGTAATCCAAAGACATCTGTCCA
GGTTAACCACTTTCAGCTCCATTCCATGACCAGGTTTGATATTTCTTTCC
AGATCCTGTTGAGATGAAGAAGAAATCTTTGCCTCTGTGGTTGAGGGATG
GTCTTGAGAAATTGGAAAAGAACAAACAAAAACAAGAGAAGAAAGTCATT
CCGAGTGCTAAGAGCATCTCAGGATATCAACATGGTTCACCAACATCTTC
GCCGGAAAAAGAGGAGGTATCCATCAATTTGTATCAAACATAAAATTTAA
AAAAAACTTTTTCTTTTTAGTCATAAGAGGATTAATTGGAAATTTTGTCA
ATTCTCCCATCTTGCCCCGTCCCTAAACTTCAGTTCATCTGCAAATAGAT
AATAGTCGATANTTCTCCCATCTTGCCCCGTCCCTATACTTCAGTTCATC
TGCATGATAATAGTCGATATAAAACTTAAAAGAGTTGTCTAATCGCCTGA
TCTCTACACTGAAAGAAGTTTACCATTTCTAACCCAGAACCATAACATCG
CATCAATAATATCTAAGAATCGATACAACGAGTTTAATTTTCCACTTGTA
GAGTGATGCAGAACTAAGCGACAAAAGTGATAATGAAGGGACATCGTCCC
CAGTGAAACATCCACTATCCCCTCCAGCTCGTCGTCAAAAACATTCATCA
TCTGAAGACGAAGAAATTTCTGAAGAGGAGAAACAGCGCAGAACTGTAAG
TTTTCATTCTATATTCAGATGCATTATAATTTTGAATGTTTGTTTTTAAA
ATGCCATTTATCATTTATCAATTTTACCTATGAATTTGACATATTTTTCG
GCAACTCTTATTACTTAGTTCACATCAATCTTTTCAGTTCTGTATTTTTG
GCATATTTTTTGTTTACTGTATGACCTTCATGATTGACTTTAATTGCAGA
TGTTGAAAATAAAAACTTGGATGACAGAAACCCTCTTAAAGGTTACAAAT
TCTGAGTTAACGAATGTTTGTGAAGAGGTTTTCTTTGAGATGAAACGATC
AGGTGAGTTTATCAATCAAACCCTCTCTCCCTCCCTCTCCCTCTCTACAT
CCCAGATGAGATTTTTTCGTGTGTTGGTATTTGTGTAAGTAAAAGGAGAG
ACGACACAAAGATTTCGAATCTATTTAAAGTTGTAAATTAATATAAATCA
AGAAAGTACATTTCCAAAACCATTTTCTTATACATTGGTTGTCATTTGTA
TTTATTAGCAAAGACAGCGATTTACAGACCTATCTACTATTTTGATTTTA
ACTGGAAATTTATTTGCGATTCTCTAACAGATTTTTCACGTATTGCACTC
CAAGCTACCCTCTGACATATTTTGCTTTTATTGGACTTATATATTCTTAT
AGCAAAGAACAAGGCAACCAATGTTCGACGTTCTGGAGGTTTGGAGTCTC
TCCGTTCGATAGGTAAGTTCCTGTAGTTTTGTGAGGAAGCAAGAGGAAGG
AGGCTTGGAGTAGATATCAGAATGAATAAAGTGTTTGATTTTCAAACCCG
AGTGACGTGCATATACGTTCGAAATCAGCCAATATACCGACTCCCAGACT
TAAAGCTAAAACTCCTGACCAGTTAATGTTACCGAATCCGTTGTTCAAGT
TTTAGAATTCAAAAAAAAAAAATTGATTCAAAGTTTTTAACCTGGAAAGG
TTAAGAATAGTAGCTCCTCAAAAGTGAAAATCAACACGCATATTTTCTTC
AGGTGAAGATGACGTCACGAGTAGTGAAGAGGAAGAAGAACCAATCAAAC
CTCCTCCACGAAAATCTCGTTTCGATGAAAAACCATCTTCGTTACCAAGG
AAACCAAAAGCAACAACAGACGAGGAGGATACATCTCCCGCCCAAAAACC
TACCAAAGCTGAACACGACATTAGGAAAGATGTACCTGTTGTCATTTCAA
AGGACTCTAAAATTAAAGATAAGAGCGAGAAACGTAACAACGAGGAGAAA
ACGAGTAAACGCAAAGACGTTGATAAGAAAAAGAGCCCGCAACATAAGAG
TTCCAAAAAGAAAAAGAAGAGGAAATATTCGGACAGTGAGTCGGACAGAT
CGGACGATTCGTATTACAGTTCGGACGAAGAAAGTGATCATAAGAAAAGT
CGTAGTAAGAAATCTTCTAAACGCCACCGCTCGGACAGTCGTTCGCCCGT
GCGTAAAAGTCGAAAGAAATCGAAATACGACTCGGATGATAGCGATCATT
ACGAAGAGAAACGAAGCAAGAAAAAGAAGAAAAAGGAACGCTATTCATCG
GACGAGGAAAGTTATGATAGTGATTATTCTTCTCAACGTAAGAAAAAATC
CAAGGGTAAGAAGCATAAACAAAGAGACCGATCTATATCCAGGTAAGCTT
GGTATATTTAATAATTACGCATTCATTCTATTAATTCCCTTCCACAACGG
TTTTATCTCAATCATTCAAAAAGTTAGCTAGATGATACTGTCATACTGTG
TTTTATTCACGAAATCTTGACCAAAGGGACCATTCACAAAGTACGTACGC
TCGAAAATGGCAAATTTTTGACTCCCCCTCCCCCTTGTAACGCTTTCGTA
CGCTTTATGTGTACCCCCCCCATTCAGCGTACGTACGCTTTTTATTTTTA
GTACACCCCCCCCCTAACCAAAGTCGAAACTTGAAACTCTAGTAACAGTA
GAATACATATGTAGGTATCCAATCGTATTTATAACAAAGTCTCAAGAAAT
TAAAAGAATCTAAGGTGAAAAAAAATACCAAAGGAGAAATGAAAAATAAC
AATCGCAAAAACAATTTTTTGATGTGAAAATATTGCGTTTTTCTCTCAAA
AAAGACAGTTTAGGAAAAATTACGAGCGTACCTACTTCTCCTCAAGGACC
CCCCTCCCCCCACGTACGCTTTCGTACGCTTTTGGGGGCACCCCCTCCCC
CTCAAGAGCGTAGGTACTTTTTGAATGGTCCCAAACCTCTAATTTTGTAA
GACTACAATGAATAAGTCGCATAAATCGTTTTGATTGTATTGAGTTAGAT
TTCATCTCATCAAGTCAAATTGGAACCCATGGCACCTTCTTACGCTTCTT
TATGTTCATAAATATGTTAAATTCATTCACTTTAGCCTAAAGAGGTTCAG
TTCGCGTCTTTGTTCAAGTTTTTTATCTTTCAAATATGTAGGTCACCGAA
GCGCTCGAAGAAGAAAAAGTGACCCATGTGATAGGTAAGTTAGGCTATTA
CTTGCAGAGTGCAGTTTGGGTTGAACTGACTAGACTTTCTTTAAAAGGTG
ATCAGGAACCACTGCTAGTGCTCAGGTTATCGGATCGTGGCAGCATGGAG
GATATATATACAGAGATAAAGATTTATCCCAAAAACGACATTCTTTGAAA
CTTTCAAACGGGACATTCAGTGATTATAGAATATTATGAACATTTTTTAG
ATTTTTTCTTTAATTTTGTAAAATTTGTACAAAGAAGGTGAAAGGAAAGA
ATATTTTTACCAATTTATATCCATTTGTGTTTACGTTCTTCTTACAAATA
TTGAAAAGGAAAATTGACAACTTCCAATTCTTCAGAATTCGAACAAGTTT
GAAGAAATTGATTTTCGGATATTCTAGAATAAAACATCTCTACAAAAACT
TTCGATTTTGGATTGTTTATTTCGACAACAATTTACAATAAATTATAAAG
CAATAGATTAGTATTTAAATATATTAGTATCTGTTCATTATAACATTATT
TTTGCTTCTGCTGCCTGCTACGGCACGGAACCAAATCTTGTAGTAGTAGC
GATTATTGTGATACACTCTCAGTGTCTTTGTGTTCTCACTGTTCCCCAGC
TCCATATGTTCTAATGACGTCACGGATAGGTGCTCGGCACATGGGGCAAG
TCTGTCCGTTCATTTTCAAATGTAATGCACAAGAGTGACATGCGCACATG
TGTCCACATTGATAGAAAACTGTATCAATTGATTGGTCGATGCAAATAGC
ACATTGTCCTCTCTGGACAGGTGTTGTGTGGTTGTTTTGTTGAATGTTCA
GGATGGCACTTGACGTTGGACGATCTTGTTGGTCTAAAACAGAATGCAAA
TTTGTATTAAGAGTTATGTTACCGAATACTTCCAGTAACATCTGTGCAAT
TCAGCCCGACAGAAAGAATTCAATAATATTGGGTTGGTACGATGATGATA
ATAGTAGTAAGATTAATTTACGTTGGAAAATTGTTGCGAATTCTGTGTTT
AAGGTTCAAAAACCGTAGATAACTTCTTTCATTGAAGAAACTTACCTGGT
TTACTAGCGAGATAGTCGCTCATGAAAGCCTGAAAGACAGCTGCAACTTC
TTGTCTAACAGCGCGTTGAGTATCAAGTTGTACTTCCATCGTCATTCGAA
GAAGTTGTTTCATTTCGTTCAGTTCTTGTTTAAGCTCTTGAATCTCGTGT
GGTGAGCTGGCTCCTCTTTCGTTGATTGTTCTTAATGACGTTGGGCGTTG
AATCGGAGGACGTTGTCTTGGTTGTTGAGAGCGAACGAATGGGCGTGGCG
TTGTGGTGTTTCCACCTAATGACTCCACACGTTGCTGAAATAGGCAAACT
TAATTAATAACTAAATTTTCAAACTTGATTTTTGTATGTCACGCTTTGAT
TAACTTGGTTGGTTTTTTAAAAGCAGAAAAAATGTCTTAGATTAATGTAA
TTGTAATTTCGAAAGGTTTGGATGTTAAGATTCTTACCTGAACCATATTC
TCCAATTCATCACGGAAATCGTCTTGTAGCATATTACTGACAACTTGTAG
ACTTTGTAGACGAGTGATGTCAGTAGCTATGCTTTCTGTTAAGATTTGTA
CACTTGCTTGCACTGTTGATTGAAGTAATGCTGGATCAACCAAAGGCGTT
GTCGAAGGTGTGGATGTCCCAGGTAATGGTGGTGGCGGTGGCGGGTTCGA
TGTTCGGCTGGCGGGAGTAGATTCTTGAGGTTGTACACTGTAAAATAAAT
ATTAATAATGTCGAATGACATTTAAGTATCTTAGCAACAAAACTTTGAAA
ACAAGAACCAAGGCGATTTTATGCATTTAGAGAAGTGTATATTAAAATAT
CTTTCTTGGGAAATTTAACCCAGCGCATAGAGAAGTCATCTGTAAGTTAA
TTAGAGAGTTTTTTTTACCTTGACTGTTGTCTTTGTTGTCGTTGAGCGAT
CTGTCTACTGAGTTGGTCTCGGAAAGATCCTCGTGCTGGTTCCGTTCGAT
TATTGTCATACCTTCTTGGGACGGGTCTTCTAGTCCCTCTTGTATTGCTG
TTTGAGCTTCTTGCTGTTGGTGCAGTAGACCGTCCACTTAATGTCGCTTC
AAGCTGACGTCGAAATCCATTTTGTATCGCGGAGCTTACTCTGCTAAGTT
GTAGAAGGGATTGGACGTCATTTGCGACTGTTTCAGGTCTGTTTTGAGCT
TCTTCTTCGGCCCTTTCTTGTTGCGTTGGCNTGTTTCAGGTCTGTTTTGA
GCTTCTTCTTCCGCCCTTTCTTGTTGTGTTGGACCATTGATTGCACGCTC
AAAGAAGTTCTCGATACTAGCTCTCGCATTACCCCCTGTTACTGGTCGCT
CTCCAAGTTGGATTCTTCTAAGTTCTAAAAATCTTTCACTGTAAAGAAAA
AATAGATTTTATGATTGATTCGGAAATTTTCGAAATATTTATCACGCCTT
TTTTCCTTTTCGTTATGATCGAATAAGATAATATATAACTAGCGGTCCCA
GACCTTTAACTGATTAAAATGATAAATCATATTTAGGACCTTCAAATCCG
TTGGGAAAGTATCATTTACTCATACTTCTAATATCTTTCATCGTGGAATA
ACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031217XLOC_031217Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049126-exon-scaffold_152-1575043694:109239..109987TCONS_00049126-exon-scaffold_152-1575043694:109239..109987Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1575043694:103891..104460TCONS_00049126-exon-scaffold_152-1575043694:103891..104460Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1575043694:103472..103635TCONS_00049126-exon-scaffold_152-1575043694:103472..103635Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1575043694:102993..103136TCONS_00049126-exon-scaffold_152-1575043694:102993..103136Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1575043694:102686..102788TCONS_00049126-exon-scaffold_152-1575043694:102686..102788Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1575043694:102276..102335TCONS_00049126-exon-scaffold_152-1575043694:102276..102335Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1575043694:101346..101985TCONS_00049126-exon-scaffold_152-1575043694:101346..101985Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1575043694:97885..100546TCONS_00049126-exon-scaffold_152-1575043694:97885..100546Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1510915933:109239..109987TCONS_00049126-exon-scaffold_152-1510915933:109239..109987Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1510915933:103891..104460TCONS_00049126-exon-scaffold_152-1510915933:103891..104460Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1510915933:103472..103635TCONS_00049126-exon-scaffold_152-1510915933:103472..103635Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1510915933:102993..103136TCONS_00049126-exon-scaffold_152-1510915933:102993..103136Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1510915933:102686..102788TCONS_00049126-exon-scaffold_152-1510915933:102686..102788Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1510915933:102276..102335TCONS_00049126-exon-scaffold_152-1510915933:102276..102335Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1510915933:101346..101985TCONS_00049126-exon-scaffold_152-1510915933:101346..101985Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1510915933:97885..100546TCONS_00049126-exon-scaffold_152-1510915933:97885..100546Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1491911889:109239..109987TCONS_00049126-exon-scaffold_152-1491911889:109239..109987Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1491911889:103891..104460TCONS_00049126-exon-scaffold_152-1491911889:103891..104460Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1491911889:103472..103635TCONS_00049126-exon-scaffold_152-1491911889:103472..103635Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1491911889:102993..103136TCONS_00049126-exon-scaffold_152-1491911889:102993..103136Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1491911889:102686..102788TCONS_00049126-exon-scaffold_152-1491911889:102686..102788Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1491911889:102276..102335TCONS_00049126-exon-scaffold_152-1491911889:102276..102335Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1491911889:101346..101985TCONS_00049126-exon-scaffold_152-1491911889:101346..101985Clytia hemisphaericaexon
TCONS_00049126-exon-scaffold_152-1491911889:97885..100546TCONS_00049126-exon-scaffold_152-1491911889:97885..100546Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_152supercontigscaffold_152:97885..109987 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.59594	2.26068	0.765988	1.0178	14.234	9.78028	3.24213	3.84125	1.84603	4.21591	4.19838	1.15717	2.94185	1.1406	0.390288	1.48936	0	0.237119	0.103144	0	0.10549	0	0.466603	0.0717288	5.21968	4.9344	0.423263	0	2.8454	4.66073
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049126 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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