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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049178 ID=TCONS_00049178|Name=TCONS_00049178|organism=Clytia hemisphaerica|type=transcript|length=9131bp transcript from alignment at scaffold_153:208644..252798+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00049178 ID=TCONS_00049178|Name=TCONS_00049178|organism=Clytia hemisphaerica|type=transcript|length=44155bp|location=Sequence derived from alignment at scaffold_153:208644..252798+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Blast
BLAST of TCONS_00049178 vs. Swiss-Prot (Human)
Match: HERC2 (E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2) HSP 1 Score: 584.334 bits (1505), Expect = 1.663e-167 Identity = 464/1565 (29.65%), Postives = 746/1565 (47.67%), Query Frame = 1
Query: 4633 LIDELKDF-LFDKKVNTDILRKCFLMQIKRAKQRLIAGYLMQSLCLRQQIFSHVRYSLLCGWLGLLVPGGSVSHAKPGILFNVELVPKDDVDKLRSVFHGFENFALK----ALIDEIEKLSDF-------QTEDEINR---------HVREMXXXXXXXXXXXXXDDVNFMVLCGVXXXXXXXXXXXXXXXXNNDEK-------SDIPFIDERKHRQVHLQ-ELDGEEMRKLLKIGSRVVRGPDWKWDDQDGPAPSQGRVVSDIGDDGWVRVEWDTGSRNSYRMGKNGKYDLKLADNIQFFXXXXXXXXXXXXXXXXXNQNEDNQLKSPLSFLLKSMTSYIVNTLSLCA-CNGEKTSSNALSTVASFFIESLRNIIDTSVSSWGADISVSAY---------FGFCRALSCSQQIEKIIGVRDWVTLLINMFDLSFLMHDPSNGGNSFLVKIQLLKHIKFLLKLQSNNAPFPSKWKRQIVGSMMKALHRMLKQ--DAIFMTESYDLH------------AAKSSMAASALTTIAEEIFSLLRYLHELQEWRDMINFQIWRYLKSIDES-----TFSVELQTR-----------VFTSLCIIGGIDPRIRVGGLVHHEKHGNGTCVDILPNGKILLYFGNSIKPKTCHLSKLDVKAQSSLNLLTLADYQKHQNLFSCLLSIA--------LKGVT-------IDWDK---QPGGSMIVSKTRLYMSVLACLRILFKE------------------PDLFIKTISREPANRLMLKELVEKALVSSPIQTTYEELELEISGLALSEKMLLDSSSNENNIF----AKHDXXXXXXXXXXXXXXXXXXXEMIASMPSLSHVLEMGFTVESVEHALNEL-GEDTRA------ERLVSWLLQHPEVQKKXXXXXXXXXXXXQPRDVSLFHPHEA-GLSKFPIGCLVKTIFKAGDV---DEYGL-----------------------GTVVKVIGADE------NILVYWETQNKALWTTADKIQIVDDFTKPKTQDVIKEGSYVRIKQIGTSHKLNMTPLLLNRVGTVTYLHHNGLDCSVTFEEMPLWHGTIRDLELVGPVHSRVTCDGCERKPVVGVRYKCKTCDDFDFCEHCFANKTDHDHNFVAYHRSKKGQHPIEAGKPGRARTEWCHSSSEKHLC------IKEMTVSSNEHMAAKMINKEIDMPWISEKAFGAHKIDLTINPHVLITNMSVVLDVDQNETYPSRFTIFAGASKNQTKLIKDVYVKGNQSTVQLLHCQEELYSFVEIQIFVGDGSTESSCKICHLSLTGQRRRKDYDQLIMKMICS--VQKKSEIKDHFLQIKQQYDGFTKQKNANKQIKIFGWGLNDKDQLGGLKGSKIKSPVLCSKMSSLHCKEVVGGSKTMFCISNKGHVYACGHSAGGRLGLGPTSDNVASPQLIEALKGHVIKKIAVHARGVHCLALTDQGEVFSWGDNEFGKLGHGDTTSLDTPKLVEALRGLNVTHLACGSNHSAVIVDHKELYTWGSGEFGRLGHGDEETHFLPKLIKSLLPYNIIDVSCGSTDAQTLAL 8856
L+ + +F L ++ V+ + +RKC L Q++RA+ RL + L + + V+Y++ CGW L+ G + L +V+L+P + L F +A++ L+D K + QT N R +L+ L++L +++++ ++ G+L Q L+ I N +E + ++E + +Q + G E+ ++KIG+RV+RG DWKW DQDGP P GRV+ ++G+DGW+RV+WDTGS NSYRMGK GKYDLKLA+ + +D + Q E N + + F + T ++ TL L A + E S A T+ LR ++++ + + + Y GF R+++ + Q+ + W+TLL+ + + G++ L + I + LQ A PS W + MK L L ++ T S D+ ++S+ A+ +T+AEE+ +LLR LH L +W +IN I L+SI S + +L+ + L +IGGID R+R+GG V H++ G GT I P GKI + F + + C L++L + N+ L + ++++ L+++A +K T +D D Q I+ R +S LR + + PDL + ++L++L+ A SP++ +++ ELE + LA+ + + ++S+ + F + T Q K+ + ++P + ++EMGF+ ++E AL L G A E LV WLL H ++Q ++ ++ +V A +S + +T K D D+Y + G V KVI D N+ W+ + W ++++ + P + IK G VR+K T+ K + VG V NG D V F + W G + ++ELV +H VTCDGC+ P+ G R+KC+ CDDFDFCE CF K H+ ++ GQ + G+ G+ + + CHSS L +K + VSS+ + A+++I+ + W S + G H I L I P VL+ + +++D + PS + G S N +K + + + +TV LL+ E + ++EI I S+ CKI L L G+ R ++ D + + S +++ E + I+++ G + A + K+F WGLNDKDQLGGLKGSKIK P +S+L+ +V GGSK++F ++ +G VYACG + GRLGLG +S V P+ I AL +V+KK+AVH+ G H ALT G+VFSWG+ + GKLGH + D P+L+EAL+ + +ACGS+HSA + ELYTWG GE+GRLGHGD T PK++K LL + +I V+CGS DAQTLAL
Sbjct: 1635 LLSTIAEFALKEEPVDVEKMRKCLLKQLERAEVRLEGIDTILKLASKNFLLPSVQYAMFCGWQRLIPEGIDIGEPLTDCLKDVDLIPPFNRMLLEVTFGKLYAWAVQNIRNVLMDASAKFKELGIQPVPLQTITNENPSGPSLGTIPQARFLLVMLSMLTLQHGANNLDLLLNSGMLALTQTALRLIGPSCDNVEEDMNASAQGASATVLEETRKETAPVQLPVSGPELAAMMKIGTRVMRGVDWKWGDQDGPPPGLGRVIGELGEDGWIRVQWDTGSTNSYRMGKEGKYDLKLAELPA--AAQPSAEDSDTEDDSEAEQTERNIHPTAMMF---TSTINLLQTLCLSAGVHAEIMQSEATKTLCGL----LRMLVESGTTDKTSSPNRLVYREQHRSWCTLGFVRSIALTPQVCGALSSPQWITLLMKVVE-----------GHAPFTATSLQRQILAVHLLQ---AVLPS-WDKTERARDMKCLVEKLFDFLGSLLTTCSSDVPLLRESTLRRRRVRPQASLTATHSSTLAEEVVALLRTLHSLTQWNGLINKYINSQLRSITHSFVGRPSEGAQLEDYFPDSENPEVGGLMAVLAVIGGIDGRLRLGGQVMHDEFGEGTVTRITPKGKITVQFSDMRTCRVCPLNQLKPLPAVAFNVNNLPFTEPMLSVWAQLVNLAGSKLEKHKIKKSTKQAFAGQVDLDLLRCQQLKLYILKAGRALLSHQDKLRQILSQPAVQETGTVHTDDGAVVSPDLGDMSPEGPQPPMILLQQLLASATQPSPVKAIFDKQELEAAALAVCQCLAVESTHPSSPGFEDCSSSEATTPVAVQHIRPARVKRRKQSPVPALPIVVQLMEMGFSRRNIEFALKSLTGASGNASSLPGVEALVGWLLDHSDIQVTELSDADTVSDEYSDEEVVEDVDDAAYSMSTGAVVTESQTYKKRADFLSNDDYAVYVRENIQVGMMVRCCRAYEEVCEGDVGKVIKLDRDGLHDLNVQCDWQQKGGTYWVRYIHVELI-GYPPPSSSSHIKIGDKVRVKASVTTPKYKWGSVTHQSVGVVKAFSANGKDIIVDFPQQSHWTGLLSEMELVPSIHPGVTCDGCQMFPINGSRFKCRNCDDFDFCETCFKTK-KHNTRHTFGRINEPGQSAVFCGRSGK-QLKRCHSSQPGMLLDSWSRMVKSLNVSSSVNQASRLIDGS-EPCWQSSGSQGKHWIRLEIFPDVLVHRLKMIVDPADSSYMPSLVVVSGGNSLNNLIELKTININPSDTTVPLLNDCTEYHRYIEIAIKQCR-SSGIDCKIHGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGL--ESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168 HSP 2 Score: 207.223 bits (526), Expect = 9.782e-53 Identity = 98/208 (47.12%), Postives = 151/208 (72.60%), Query Frame = 1
Query: 8233 IFGWGLNDKDQLGGLKGSKIKSPVLCSKMSSLHCKEVVGGSKTMFCISNKGHVYACGHSAGGRLGLGPTSDNVASPQLIEALKGHVIKKIAVHARGVHCLALTDQGEVFSWGDNEFGKLGHGDTTSLDTPKLVEALRGLNVTHLACGSNHSAVIVDHKELYTWGSGEFGRLGHGDEETHFLPKLIKSLLPYNIIDVSCGSTDAQTLAL 8856
I+GWG N + QLGG++G+K+K P C +++L +++GG +T+F ++ G +YA G+ AGGRLG+G T ++V++P L+E+++ IKK+AV++ G HCLAL+ +GEV+SWG+ E GKLGHG+ + D P+++E+LRG+ V +A G HSA + +LYTWG G +GRLGH D E PKL+++L + ++D++CGS DAQTL L
Sbjct: 3954 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGT-ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160 HSP 3 Score: 181.8 bits (460), Expect = 4.039e-45 Identity = 175/733 (23.87%), Postives = 289/733 (39.43%), Query Frame = 1
Query: 1648 NVKIANICCTDTLVFILSLNGTVYCCEHDKDKLELKVYPQLKGLKIMQLTCSFDGH-FIALTNTGHIITWK-DVNSVFEHMTSVPL------------QIKGKVITVAAGFGFYSITTDQNEVCIWGNTFSGSANYEQHKDGFTPRQFCEFENTKIIDLAFSQYQQEVIFVTEEGKIWSWKNGT-------------TMSLISAXXXXXXXXXX-AKYFYVALASNGQVYRWGRDRFSKTPHDSEVQLQ-PVV--KLNKESIASISVGAYHCIAITNTSNVYCWGGLGGKEEEEMII---REPVLLKAVSELGVSRIVAGPHQIFCWRVSFVNPLKEHVPFAIEINRETFENLEQLLSYSQKVED-------PEVKDDLISSCLYLLKMQFHGARAHDVCTCFLGFDGTSEFSQKLKSLVINLISTLPYHSKIHKLAEEVLSVGWLYLLPSAIERATTFSTLLKIKTETN----SENHSFLLQLLMKCFLEKNGXXXXXXXXXXXXIAN-----------------SNNDDFDPTNS--------------------TLFILLKELFYVTTSCILVSVKEEDPRL-----IEQE------SLNVLLKFQRLMFARVF----IVTEKDICWPARCYVYEPTPMVKSLTAVISTFINLLQTSCKQLLVYHSMVRKCSHKRLQESP-------IGIIFQEFSIYLILLQNYAPIITSNCETFAQFAEILDWFDKLN 3534
N+ + I C + ILS NG VY ++ D L ++ L I+++ DGH ++AL TG + +W H +VPL Q V+ +A G + + T + E+ WG G + +D P + K+ID+A + + VTE G++WSW +G T LI V F +AL +GQVY WG+ + H +E ++ P + L + + ++ G+ HC+A+T S V+ WG + + + EP L + + I GP Q F W + VPF ++I TFE L+ LL + D P+ K+ + + L LL++Q H A +H V FLG S LK V+ L S+ S + A+ VL GW LLP+A ERA S LL N S F++ LL+ + GLE L + I + +N F + + L L+++L S + +K+ R+ EQ SL++LL+FQRL+ ++++ I DI +P + + +++ + LL T +L + + S + E G++ E + ++LL + + +L+ D+ N
Sbjct: 450 NLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDICSMTFEQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRLQLHAAISHQVDPEFLGLGLGSILLNSLKQTVVTLASSAGVLSTVQSAAQAVLQSGWSVLLPTAEERARALSALLPCAVSGNEVNISPGRRFMIDLLVGSLMADGGLESALHAAITAEIQDIEAKKEAQKEKEIDEQEANASTFHRSRTPLDKDLINTGICESSGKQCLPLVQLIQQLLRNIASQTVARLKDVARRISSCLDFEQHSRERSASLDLLLRFQRLLISKLYPGESIGQTSDIS----------SPELMGVGSLLKKYTALLCTHIGDILPVAASIASTSWRHFAEVAYIVEGDFTGVLLPELVVSIVLLLSKNAGLMQEAGAVPLLGGLLEHLDRFN 1172 HSP 4 Score: 161.384 bits (407), Expect = 5.221e-45 Identity = 86/213 (40.38%), Postives = 119/213 (55.87%), Query Frame = 1
Query: 8230 KIFGWGLNDKDQLGGLKGSKIKSPVLCSKMSSLHCKEVVGGSKTMFCISNKGHVYACGHSAGGRLGLGPTSDNVASPQLIEALKGHVIKKIAVHARGVHCLALTDQGEVFSWGDNEFGKLGHGDTTSLDTPKLVEALRGL----NVTHLACGSNHSAVIVDHKELYTWGSGEFGRLGHGDEETHFLPKLIKSLLPYNIIDVSCGSTDAQTLAL 8856
++ GWGL +G + + P+ C +++L ++ K +S G VY ++ SD +A PQL++ L I KIA H+ G H LAL GEV+SWG + G+LGHGDT L+ PK++ A G +V H+ACGS +SA I ELYTWG G +GRLGHG E +P L+ L +IDV+CGS DAQTLA+
Sbjct: 424 EVIGWGL-----IGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN----------SDTLA-PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAV 620 HSP 5 Score: 41.9726 bits (97), Expect = 5.221e-45 Identity = 29/75 (38.67%), Postives = 43/75 (57.33%), Query Frame = 3
Query: 8904 NIIDVSCGSTDAQTLALSSDGNIWSWXXXXXXXXXXXXSEGCLSPTLITKLSNQNVCKVLCGAQFSLALTKNGEV 9128
+++ V CGS ++AL+ DG ++SWG GD +LG G E P L+ L + V V G+ LALT++ EV
Sbjct: 658 DVVKVRCGSQ--FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730 HSP 6 Score: 129.413 bits (324), Expect = 1.866e-32 Identity = 65/201 (32.34%), Postives = 107/201 (53.23%), Query Frame = 1
Query: 8230 KIFGWGLNDKDQLGGLKGSKIKSPVLCSKMSSLHCKEVVGGSKTMFCISNKGHVYACGHSAGGRLGLGPTSDNVASPQLIEALKGHVIKKIAVHARGVHCLALTDQGEVFSWGDNEFGKLGHGDTTSLDTPKLVEALRGLNVTHLACGSNHSAVIVDHKELYTWGSGEFGRLGHGDEETHFLPKLIKSLLPYNIIDVSCGS 8832
K+F WG D +LG P L + + +++ GS +++ G +Y G GRLG G + + P++++ L GH + ++A +R LALTD+G VFSWGD +FGKLG G + + P+ +E L G V + CG+ S + ++TWG G++ RLGHG + P++++ L I+ V+ G+
Sbjct: 3067 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL-KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 3266 HSP 7 Score: 31.9574 bits (71), Expect = 1.866e-32 Identity = 24/70 (34.29%), Postives = 39/70 (55.71%), Query Frame = 3
Query: 8904 NIIDVSCGSTDAQTLALSSDGNIWSWXXXXXXXXXXXXSEGCLSPTLITKLSNQNVCKVLCGAQFSLALT 9113
I+ V+ G+ LA++ G +++WGD D G+ G G + PTL+ L Q + +V CG+ S+A T
Sbjct: 3258 KIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325 HSP 8 Score: 138.272 bits (347), Expect = 6.826e-32 Identity = 75/206 (36.41%), Postives = 114/206 (55.34%), Query Frame = 1
Query: 8230 KIFGWGLNDKDQLGGLKGSKIKSPVLCS----KMSSLHCKEVVGGSKTMFCISNKGHVYACGHSAGGRLGLGPTSDNVASPQLIEALKGHVIKKIAVHARGVHCLALTDQGEVFSWGDNEFGKLGHGDTTSLDTPKLVEALRGLNVTHLACGSNHSAVIVDHKELYTWGSGEFGRLGHGDEETHFLPKLIKSLLPYNIIDVSCGST 8835
+++ WG D +LG ++ P + S K + H + GS I+ +G +Y G GRLG G +S++ A P L+ LKG + +A + LA+T+ G+V+SWGD ++GKLG G + TPKL+E L+ L+V + CGS S + ++Y+WG G+ RLGHG EE PKL++ L +IDV+ GST
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG-SSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGST 719 HSP 9 Score: 127.487 bits (319), Expect = 7.140e-31 Identity = 64/201 (31.84%), Postives = 103/201 (51.24%), Query Frame = 1
Query: 8230 KIFGWGLNDKDQLGGLKGSKIKSPVLCSKMSSLHCKEVVGGSKTMFCISNKGHVYACGHSAGGRLGLGPTSDNVASPQLIEALKGHVIKKIAVHARGVHCLALTDQGEVFSWGDNEFGKLGHGDTTSLDTPKLVEALRGLNVTHLACGSNHSAVIVDHKELYTWGSGEFGRLGHGDEETHFLPKLIKSLLPYNIIDVSCGS 8832
+++ WG + +LG S P + + + +V G C++ G +Y G GRLG + D + P+L+EAL+GH + IA + L LTD V+SWGD ++GKLG G + P +++L GL V + CGS S + +YTWG G++ RLGHG ++ P+ ++ L +I ++ GS
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGS 4258 HSP 10 Score: 28.4906 bits (62), Expect = 7.140e-31 Identity = 19/51 (37.25%), Postives = 30/51 (58.82%), Query Frame = 3
Query: 8955 SSDGNIWSWXXXXXXXXXXXXSEGCLSPTLITKLSNQNVCKVLCGAQFSLA 9107
+ DG +++WGD D G+LG G + P L+ L + V +V CG+ +LA
Sbjct: 4265 TEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315 HSP 11 Score: 97.0561 bits (240), Expect = 1.965e-19 Identity = 57/153 (37.25%), Postives = 88/153 (57.52%), Query Frame = 1
Query: 8233 IFGWGLNDKDQLG--GLKGSKIKSPVLCSKMSSLHCKEVVGGSKTMFCISNKGHVYACGHSAGGRLGLGPTSDNVASPQLIEALKGHVIKKIAVHARGVHCLALTDQGEVFSWGDNEFGKLGHGDTTSLDTPKLVEALRGLNVTHLACGSNHS 8685
+F WG D +LG G +G I P +++ ++ G++ ++ G V+ G RLG G + +V PQ++E L+G I +AV A +HCLA+TD G+V++WGDN+ G+ G+G TT P LV+ L G +T +ACGS+HS
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNI--PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG-SDVHVRKPQVVEGLRGKKIVHVAVGA--LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321 HSP 12 Score: 93.2041 bits (230), Expect = 2.968e-18 Identity = 65/271 (23.99%), Postives = 112/271 (41.33%), Query Frame = 1
Query: 1813 HFIALTNTGHIITWKDV-NSVFEHMTSVPLQ-------IKG-KVITVAAGFGFYSITTDQNEVCIWGNTFSGSANYEQHKDGFTPRQFCEFENTKIIDLAFSQYQQEVIFVTEEGKIWSWKNG--------------TTMSLISAXXXXXXXXXXAKYFYVALASNGQVYRWGRDRFSKTPHDSEVQL---QPVVKLNKESIASISVGAYHCIAITNTSNVYCWG----GLGGKEEEEMIIREPVLLKAVSELGVSRIVAGPHQIFCWRVS 2535
H +AL++ G + +W + + H P ++G +V+ VAAG + T ++ WG G + +D P+ + +++D+A + + +T++ +WSW +G M + S VV V F VAL +G VY WG+ + + H S+ + + V L + + +I+ G+ HC+ T VY WG G G I R P L+ A+ V+R+ G W S
Sbjct: 4050 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR-PRLVAALQGKKVNRVACGSAHTLAWSTS 4319 HSP 13 Score: 92.8189 bits (229), Expect = 3.980e-18 Identity = 69/252 (27.38%), Postives = 117/252 (46.43%), Query Frame = 1
Query: 8194 GFTKQKNANKQIKIFGWGLNDKDQLGGLKGSKIKSPVLCSKMSSLHCKEVVGGS--KTMFCISNKGHVYACGHSAGGRLGLGPTSDNVASPQLIEALKGHVIKKIAVHARGVHCLALTDQGEVFSWGDNEFGKLGHGDTTSLDTPKLVEALRGLNVTHLACGSNHSAVIVDHKELYTWGSGEFGRLGHGD--EETHFLPKLIKSLLPYNIIDVSCG--------STDAQTLALXIPYLYLFRSNHFSLTILL 8913
G T + +++ WG + +LG P+L + + L +V GS ++ G V++ G G+LG G SD +P+LIE L+ + K+ ++ +ALT G+V+SWG + +LGHG + PKL+E L+G V +A GS H + + E+++WGS + + H D T P + L +I+ ++CG S ++ L +P++ S F LL
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQ--FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSEWSIGLRVPFVVDICSMTFEQLDLL 805 The following BLAST results are available for this feature:
BLAST of TCONS_00049178 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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