TCONS_00049266 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049266
Unique NameTCONS_00049266
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2210

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049266 ID=TCONS_00049266|Name=TCONS_00049266|organism=Clytia hemisphaerica|type=transcript|length=2210bp
TTAAAGATACTTATCTTGAAACTTGAACATGTATTTTTTCAGTTGTAGAA
TCTAACATAAAAAATTATGGCAAAAACACTTTCCGATTTCATTTCTAAAG
GATGTCCAAAGGATATTATAGAACAACAATTTGGCAACATCAATTGTCAG
AAGCAACAAGGATATGACGTTACTGGCAAGTACTTTTATatgtttgaaaa
caaaaacgagAAACTTGGTTATATGCATTATTGCAGCAACTTAGAATATT
GCAATTATTGCCAGAGTGATGCCAAAGTCTGGTTCCTGTATATGAACGAA
GAAGACCATTCGCTAAAAACATCAGAAATTGTTTTCCACCAAGAGGCTCA
AATGGTCGACAAACGTAGAAAGACATTTTATGATCCAAACACCAATTCCT
GTATCTTTGTTACAGAGCCTAAAATCATTAACCAGAACTTTCAGATTAAC
ATCTTTAAATGTAATATTGATGATTGCACTATATCCAAAAGAATTGTTTT
TGATAATAATAAATCCGGAGATTTGGTATTGAATTTCCAACAAGGTGTTA
ACAAGATACAGTATCAACTATTGTTCAATAATGACGGCAAATCATATCTT
GGTATCTTTACTCTTGTGTCAAAGACGTGGAATTTCGATTTGATAGAAAT
TTCTGAACAAGGAATATCACATCGACTCATGAAGCTTAACACAGGAATCA
CCAAAATTATAAGCCCAACATCATCACTGGCTGGCACCTCTTTCTTGACA
AACCAAATGAAAATAACACAGAAAGATAATTTGAAATTCTATCTTGATCT
CACCGATGACTCGATACTAATTTCTGGTGACTCCAGTGAGGGTTGCAAAG
TTATCACAGATGTAAACTTTTTGAGTGGAATTGTAAATCAGACATATAAA
CTAACTGGAACAATCTTTGAAGATAATCTAACAATGGATCAAATCCAACA
ttaccaaaataaaattttcatttacaCAACAACCAAACCTTCAATTATGG
TCAAGTTTTTTCAACTAAAAGAAGATGGTTTCATAAAAGTGTTACACCAA
ATTGAATGCAGTTCTGATACAATTGAAGCCAAGCTAATGATACCGTTTGG
GAATAAGGTGATGCTTTATACCAAACAGGAAGCTGATAAAACTATAACAT
CTACAATCACAGACTTGGCAACAGATAAATGTTTATACAAgacaaattct
atcaaaagtgtGATGCCAGAGCTACAAACCATATTCTTGAACTGGAATTT
AAAAGAGGTTATCAGGACAAAGACAGGATCTTCAAATTCTCTTGATATTT
CAATGCATTATATTGGTCagagaaagaaagttcttgatCTAAAAGAGATT
AGTCGAATGTCAgcattgaaacatttttcaagaaatGAACTCTCAAGTTA
CATTCTGCCATATAGCATACGTCGAGAAATGGCATTGcaatgatgaaaat
aatatcttttttcttgtccattaacattttattttattgttgaCAGCTCT
AGACTAAATTTACacttattcaaaatttcttttttgaatccAACTTTCTA
TTTCAAATTATCAGTCAGTCAAGGTAAAGCGTTATACTGAAATTCAACCA
AATCTCTCCCTGTGATAGTGATAGTCTACTGCTTACAAAGGGACTAATAA
ATTTGGCAAGGGCTGTTCAAAAGACATTTACtaaagacaaaatatttggt
ttATATTTATTTGAATGTTTTATGATTATAATTAACTTTAGGAGCAATTT
TGTATATAACTCTAATGACAATCCTATACTATTGGAAACAAATACCAAAA
CATCTCTTTCGTATTaattattctttttttcttaattaCAGGCTTTCTTA
TAAGAATGGTATTCGCGCAGCTTTCTTATACTTCGATTCCAGCGAGCCCG
AAGCCTATACTTACTCGACACGAAGGGTTTGATTGCCCGCCGCGTAAATC
TTTTAGGCTATGTTGTGGAGCAAGATCCTTTTGGCGGCAATCTTTCGAAC
CAAGATGGTAGACCAAGTGGcgggaaatttttttgtttcggtTGCATGCA
AGGCTGGAGGGTACACGTGCGTGTCTGAGTCTTCTCGCAGTTCAAGCTCC
TGTAATGATATTTGGCAAGTCAATACAATACTTTCACTTTAATGATACCA
TTCGAAATCGTACATTCTGAGAATTATGTCACAAAGCAAATCTTTATCAC
CACATAGCTT
Run BLAST on NCBI

protein sequence of TCONS_00049266-protein

>TCONS_00049266-protein ID=TCONS_00049266-protein|Name=TCONS_00049266-protein|organism=Clytia hemisphaerica|type=polypeptide|length=458bp
MAKTLSDFISKGCPKDIIEQQFGNINCQKQQGYDVTGKYFYMFENKNEKL
GYMHYCSNLEYCNYCQSDAKVWFLYMNEEDHSLKTSEIVFHQEAQMVDKR
RKTFYDPNTNSCIFVTEPKIINQNFQINIFKCNIDDCTISKRIVFDNNKS
GDLVLNFQQGVNKIQYQLLFNNDGKSYLGIFTLVSKTWNFDLIEISEQGI
SHRLMKLNTGITKIISPTSSLAGTSFLTNQMKITQKDNLKFYLDLTDDSI
LISGDSSEGCKVITDVNFLSGIVNQTYKLTGTIFEDNLTMDQIQHYQNKI
FIYTTTKPSIMVKFFQLKEDGFIKVLHQIECSSDTIEAKLMIPFGNKVML
YTKQEADKTITSTITDLATDKCLYKTNSIKSVMPELQTIFLNWNLKEVIR
TKTGSSNSLDISMHYIGQRKKVLDLKEISRMSALKHFSRNELSSYILPYS
IRREMALQ
Run BLAST on NCBI

transcript from alignment at scaffold_154:291506..302761-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049266 ID=TCONS_00049266|Name=TCONS_00049266|organism=Clytia hemisphaerica|type=transcript|length=11256bp|location=Sequence derived from alignment at scaffold_154:291506..302761- (Clytia hemisphaerica)
TTAAAGATACTTATCTTGAAACTTGAACATGTATTTTTTCAGTTGTAGAA TCTAACATAAAAAATTATGGCAAAAACACTTTCCGATTTCATTTCTAAAG GATGTCCAAAGGATATTATAGAACAACAATTTGGCAACATCAATTGTCAG AAGCAACAAGGATATGACGTTACTGGCAAGTACTTTTATATGTTTGAAAA CAAAAACGAGAAACTTGGTTATATGCATTATTGCAGCAACTTAGAATATT GCAATTATTGCCAGAGTGATGCCAAAGTCTGGTTCCTGTATATGAACGAA GAAGACCATTCGCTAAAAACATCAGAAATTGTTTTCCACCAAGAGGCTCA AATGGTCGACAAACGTAGAAAGACATTTTATGATCCAAACACCAATTCCT GTATCTTTGTTACAGAGCCTAAAATCATTAACCAGAACTTTCAGATTAAC ATCTTTAAATGTAATATTGATGATTGCACTATATCCAAAAGAATTGTTTT TGATAATAATAAATCCGGAGATTTGGTATTGAATTTCCAACAAGGTGTTA ACAAGATACAGTATCAACTATTGTTCAATAATGACGGCAAATCATATCTT GGTATCTTTACTCTTGTGTCAAAGACGTGGAATTTCGATTTGATAGAAAT TTCTGAACAAGGAATATCACATCGACTCATGAAGCTTAACACAGGAATCA CCAAAATTATAAGCCCAACATCATCACTGGCTGGCACCTCTTTCTTGACA AACCAAATGAAAATAACACAGAAAGATAATTTGAAATTCTATCTTGATCT CACCGATGACTCGATACTAATTTCTGGTGACTCCAGTGAGGGTTGCAAAG TTATCACAGATGTAAACTTTTTGAGTGGAATTGTAAATCAGACATATAAA CTAACTGGAACAATCTTTGAAGATAATCTAACAATGGATCAAATCCAACA TTACCAAAATAAAATTTTCATTTACACAACAACCAAACCTTCAATTATGG TCAAGTTTTTTCAACTAAAAGAAGATGGTTTCATAAAAGTGTTACACCAA ATTGAATGCAGTTCTGATACAATTGAAGCCAAGCTAATGATACCGTTTGG GAATAAGGTGATGCTTTATACCAAACAGGAAGCTGATAAAACTATAACAT CTACAATCACAGACTTGGCAACAGATAAATGTTTATACAAGACAAATTCT ATCAAAAGTGTGATGCCAGAGCTACAAACCATATTCTTGAACTGGAATTT AAAAGAGGTTATCAGGACAAAGACAGGATCTTCAAATTCTCTTGATATTT CAATGCATTATATTGGTCAGAGAAAGAAAGTTCTTGATCTAAAAGAGATT AGTCGAATGTCAGCATTGAAACATTTTTCAAGAAATGAACTCTCAAGTTA CATTCTGCCATATAGCATACGTCGAGAAATGGCATTGCAATGATGAAAAT AATATCTTTTTTCTTGTCCATTAACATTTTATTTTATTGTTGACAGCTCT AGACTAAATTTACACTTATTCAAAATTTCTTTTTTGAATCCAACTTTCTA TTTCAAATTATCAGTCAGTCAAGGTAAAGCGTTATACTGAAATTCAACCA AATCTCTCCCTGTGATAGTGATAGTCTACTGCTTACAAAGGGACTAATAA ATTTGGCAAGGGCTGTTCAAAAGACATTTACTAAAGACAAAATATTTGGT TTATATTTATTTGAATGTTTTATGATTATAATTAACTTTAGGAGCAATTT TGTATATAACTCTAATGACAATCCTATACTATTGGAAACAAATACCAAAA CATCTCTTTCGTATTAATTATTCTTTTTTTCTTAATTACAGGCTTTCTTA TAAGAATGGTATTCGCGCAGCTTTCTTATACTTCGATTCCAGCGAGCCCG AAGCCTATACTTACTCGACACGAAGGGTTTGATTGCCCGCCGCGTAAATC TTTTAGGCTATGTTGTGGAGCAAGATCCTTTTGGCGGCAATCTTTCGAAC CAAGATGGTAGACCAAGTGGCGGGAAATTTTTTTGTTTCGGTTGCATGCA AGGCTGGAGGGTACACGTGCGTGTCTGAGTCTTCTCGCAGTTCAAGCTCC TGTAATGATATTTGGCAAGTCAATACAATACTTTCACTTTAATGGTAAGA GACCTCTATTTTTTCAGAAGTCATCTTCTTGAATCATGCTTTGCTGAAAT TATCCTACCAAACAGTACCAATATCATTGTTGGTACTATATCGCCATCCA AAAATGGTTGGCTTCAATCAAGATTTTCTAAAACCTCTGATTAGTAAAAT TTCTTCTGAGAAAAAGCAACTCCTCCTTCTTGGAGACTTCAATCTTAATC TTTTAAAATGCGAGGATGATTCAGAAATAATGTCCTTCATGGATATNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGTGTGTGTGTGTGTA TGTGTGTGTGTGTGCGTAATTGTGTGTGCATGAACTTTGTGTGTTTCCCC AGGGTGGGAGGGGGTGGGTTGTGTAACAGGTAGAACTTTATAGATAAAAC TACTCAAAGAAATTTCATAAAATAAAAGTAAAAATATTTCTTATATTCAT TATTTTGTGTCACTATTAATATTATGATATGATAATCGTTTATTCATTTT TTCTTTAGTTCTGTAATAATTTTTCATTTTCTTCTAGGTTCCCCATTGTA TTAGAGAAATCTATTTTTCTTTTTGTAAGGGGTTATCCTGCTGTGTTGCA GCGAAAATATATTCAATTCAATTCAATTCAATTCAATTCAATTCAATTCA ATTCAATTCAATTCATCACATATAGGAGCCCCCCCCCCAGCGGGGAACTT CAATTCACGCAATCACACAATTTTTTTCCCAAATTCACGCATTCACGCAA TGTTTTTTCGCAATTCACGTAATTTTTGTTCACACAAAGCTTTCCAATTC ACGCATTCACGCAATTTTTTTTAAATTTTCACGCATTCATGCAAGTGAAA AAGCCCATTCACCACGCATTCATGCAAACTGCTGAGGGGCCATTAGATCA TTGTTTTATTGGAATTGCTTTTTCCAACCCAGCCCGCCCCCAGTGTCCAT TTTAGCATTAAGGCTAAGGCCAGGCCCCATTGANCTGAAATATTAGCTCA AATCTGTGATGGACGGGCATCAGTGGAGGGAAACTTGCATAGCCATGAAA TGCCTGATCAACCAAAGCAGTAAATTTCAAAACAAATGTAACAGTGCAAG AACTACGCAGCTCCGCTCGTAGCTCTACTCTACCATTTTAAAATCTAGCG AGTTACTCACCGACAGAATTGCGGGTAAATAAAACAGCGTGGTTGGATAA TAAAAAATCATACTAGGTCATAAATCTTAAAATGGTGGGAATTCNCAATT CGAAGCTGATAGACCTATTTTAGAATGAAAATGTTAAGTTTTTCTGAAAG TCAAAAGGTTAATGAAGATCTCCCAAAAGTTATTTGATTCTGAATTACAA TTTTCTCTTCAAATTGAGAGGCTGTTAACATTGCTACAATTTTGTCACGT ACAGGACAATTTTTAGCTGTAAAACCTGTGGAAAAAATTGAAAACAAGAA AACAGCTTGTAAAGTGTGATGAAACTATTTTTTTCTTAAAACCTAAACCC TAGAGGATACAAAAACACCAAAAGAAGTTGAATTTTTGAAGAAAAAAAAT TTTGAGATTTTTTTAAGACTTTGGGAACAATTTCATGCAAATCACCCATT TAGAGTCGGTTGGAGGACACAAACCAAACTAATCAATCGGGCCTGGCCTA ATCGAAAGAAGGGAGTTGTACTTTTGCGGAGTGACTGGATTGCCCCTTTT TAGTATGGTATTACGGGATTTGACAAAAAAAGAGACATGAAAACAGTATA AGTTGTTTGGGAGAATGTGACAAATCTATTTAATGGGTGAATTGTGCCAA ATCTGTACCGTGGTTTCGTAAACAAGGCAAACTGTATTCAAAGTACCATA GAAGTGGATGTGTTAGGTATTAGAGCTTAAGTTTTTGTGGATTTGGTNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNAGTATCAGTCAGAGCTAAGTCACTT TTTGATATTTTATTTTGTCTTTGAAATATTAGCTCAAATCTGTGATGGAC GGGCATCAGTGGAGGGAAACTTGCATAGCCATCAAATACCTGATCAACCA AAGCAGTAAATTTCAAAACAAATGTAACAGTGCAAGAACTACGCAGCTCC GCTCGTAGCTCTACTCTACCATTTTAAAATCTAGCGAGTTACTCACCGAC AGAATTGCGGGTAAATAAAACAGCGTGGTTGGATAATAAAAAATCATACT AGGTCATAAATCTTAAAATGGTGGGAATTCAGATGTTTCTCAATGGCAGC TGGACATGTAATCTCAAATTTAATAATGATATCAAACATAATTATTTATG ACATCACTTTCATGATTAGGAGAATTTGTTTTGATTTAACTTTGTATTTT AATGACCAGCTAGGTCATTCAATCGAGGGCTCTGCATGTTGGCCTCTACT GATGCAAGTTACCTGACTTCATGGTAACTCGTCTGCAGGGATATTTGTCC CTGATGCATATGTGAATAAATCAAATTGGTTAAAACACGCCCAGTCACTG AGCAGAATATTCGCATGATTTTTTATATTTTTCTATGCGTGAGCATAATT TATGGAAAAAGCTGACTTTGCAGAAAAAGGAAAACAAATCAACATGAAAA CACAAGCTCATGTGTATACAAACAAAATGGCTATGGGGAGCGTTTATAAA TGTGGCTGATGTTTTGATGTTTTTAGTAGTATTTAGTAGTTTTGAAAGAT CTAGGAGCTTGCTGAAGAGACTTTATGGTAAGTTAATTATGTGTGTCTGT CTAGGTTTCCAAAGTTGTGACAGTCTGTCAACAAGGATTCACTCACATGC TATGCCTTGTGCCTTTTAAACTGTACCAGACTTTTTTAGTTACACCAGAG ACTCTAAGTTAACCAAATACCCAACAAAGTACCTGAAATTGTAACCGTCG AAATACAAACACACCAGAAACCTGTCATAGTCTCAACATGTTACCGTTCC ATGTATAACTCTAAAGAACAAAACAGACAACTAGCAGAAGAAATAACAAA TACCGGCAAGAAATACAAAAATCATCGTCTATGGGTAGGAGGCGACTTCA ACCTACCAGATGTTGATCGGAACACCAGCATTATTTCTAAGCTCTAGTTT AGACGGCTGACTTTCTGCCCTGCCTATTTTAAGCGAACAATACCTTGAAG TCTTTGAAACTTCAGGTTAAGGCTAAATGTGCAGAAACAAAATGTATTTT TAAAATTATTTATTTAGGTCCACTTCTTTAAAATAAGATTCAAAAAAACT CTTAACCAAAGTTGCTTTCGAACGGTCAATTTTTTTCCAAATTTTCCAAA AGGGGATTTCAAAAAGGTGCAACATAGTTTTCTGTCACCTTTTAATTTTA TCTAGCATTTTGCATGTTTTTTCTTTCTCTAATCGCATTGATGATTGGTC ATTTTTTTAACAATAAAGTAAATTTAAGTGTGCAATGCAAAAGTCAAAGG TATATAAAAATGGATTGCCTGACTCCAGCTTTATGACAGATGTTTCTCTC TCTTGGATGATTTTAGTTATCTTATTTTTAAGGAAATACATTTTAATGTA TAATGCTGTTTGTATAATGTCAAAGGCTGTATTAAAATAGATTGTCCAGC TTGTGATAAAGGTTAGGGATTTCTGGGTAGGAAAAAAGCAAATGGGTTGG GAAAAGGATTTTTCAGTTTTAGGAGGGGGATTCGACAACCAGGCGGTCAA AAATTTCTTGGGTTTCAGTTTCAGTCTTTCTCAGTCTCAAAGCTTGGTCC AAAGATAATGCCTGATCGTCTAATAATATCCCAATCACCAACTATATTGT AAACTTAGAACGTCACTGGTAATTCTCAAGGTTAGGAGTGCAAAGAAGGA GGAAGGGAATCAAAACAAATTCCAAGCTATGAACAAGGTAAAAACTAAAT TCAACCTTAAACATGTCAAATTGAATAAAATTTGATAGAAATTTATAAAG TTTAAAATGTAGATGTAGATTTTTTAATTATTTTTTAAATCATATCATTT TTATTAGAAAATGTAAGGCTCATAGAGCTTATAATATAATATAGTACATA ATTGAAGTTATAAACATAAACATAAACAAAAAATGCGCAATTTCTTTTGA ATCTGCAGAATTGGGAAATGTGACAGCCAATGTCTTAATTGTTTTTTTTT AATGGTTAGGTAAATCTTTTAACCAAGTCAATTTCATTACAGTACAAGTC CCCTTCGTAGAACGACGGAGTATGAAGAAACTCACTGCGACTTTGAAAGT GCATAAAATAAAGTTAAAATTCACAATATATCATTCAACAATATTGAACA CTAGACTTATTTTCTGATTATATTATGTTCAGGTCCATATGGATATTTAG TTATGTTCTCATTACCGTCTTCAGTAACAACTGTAATATCATGTTCTCTG TAACCACCAGCTCCTGGCAAACCTTCTGGAATTGTTACCATTGGCTCCAT AGAGATTACCATATTTGGTTCTATGACTGTCTCAATGTCTTCTCTCAATT CGAGGCCAGCCTCTCTTCCATAATAATGACACAAACTTCCAAAAGAATGA CCATATCCAAATGTACGGTATTTCAAAAGATCATGTTTCTTGAAGATTTC GTTTAGCTCATGTGCAATTTCAGAGCATTTGACTCCAGGCTTGATAAGTT CTAGCCCGCGTTCGTGGACTTCAACGTTTGCTTCCCAGACTTTGATGTGC GCGTCTGACGCGTGGTTCAAAAATAACGTACGCTCAAGCGCTGTGTAGTA TCTAAAATGACAAATTTGAACGTCATGTATTTTTCGTTTTAGGTTTGTTC ATGGGCTCCTTTTCGATAGCCTAAAAGTAAGGTTAAGCCGCCCCTTCCTG AAAATGAAGGAATTTTTAAGTTCTCAAAATAGGTGTAATGTAGCAAAACT TTAAAACATGAATTAGTATAATTTGGGATAAGGAGGCTTTCCACATAATT CAAAGAGACCACCAGGCCATTTGCCTGATTGGTATTTTTTTAGGGAATAG CGTAAATCCAAAATTTTTAGGTGTGGTGGCGTGATCAAGATTTAGGCATG AGGAGGGCTAAAAATTGGAGGTGTGATGTGTGATTGGACTATTTTGTTGC TATTTTTTTGTGCGATGATAAATTCTAGTGGTTTTTGTAATCGTGATGAC TGCAAAAAAATTGATATGATGGCGGTGAGTAGTGCCGCTGGGAGACCTCT TCAAAAATAAATCAAAAACAGGTTTATAATGGGTGAGAATTAGGTTCTTG ATTTTAGATTCAAAGATTTTTAGTGTTCTTTCAACTGTAAAAATGACATT AACATTATTCTAATTGATATCATCTACTTCTGGTTTTCAGATACCATTCG AAATCGTACATTCTGAGAATTATGTCACAAAGCAAATCTTTATCACCACA TAGCTT

Coding sequence (CDS) from alignment at scaffold_154:291506..302761-

>TCONS_00049266 ID=TCONS_00049266|Name=TCONS_00049266|organism=Clytia hemisphaerica|type=CDS|length=1377bp|location=Sequence derived from alignment at scaffold_154:291506..302761- (Clytia hemisphaerica)
ATGGCAAAAACACTTTCCGATTTCATTTCTAAAGGATGTCCAAAGGATAT
TATAGAACAACAATTTGGCAACATCAATTGTCAGAAGCAACAAGGATATG
ACGTTACTGGCAAGTACTTTTATATGTTTGAAAACAAAAACGAGAAACTT
GGTTATATGCATTATTGCAGCAACTTAGAATATTGCAATTATTGCCAGAG
TGATGCCAAAGTCTGGTTCCTGTATATGAACGAAGAAGACCATTCGCTAA
AAACATCAGAAATTGTTTTCCACCAAGAGGCTCAAATGGTCGACAAACGT
AGAAAGACATTTTATGATCCAAACACCAATTCCTGTATCTTTGTTACAGA
GCCTAAAATCATTAACCAGAACTTTCAGATTAACATCTTTAAATGTAATA
TTGATGATTGCACTATATCCAAAAGAATTGTTTTTGATAATAATAAATCC
GGAGATTTGGTATTGAATTTCCAACAAGGTGTTAACAAGATACAGTATCA
ACTATTGTTCAATAATGACGGCAAATCATATCTTGGTATCTTTACTCTTG
TGTCAAAGACGTGGAATTTCGATTTGATAGAAATTTCTGAACAAGGAATA
TCACATCGACTCATGAAGCTTAACACAGGAATCACCAAAATTATAAGCCC
AACATCATCACTGGCTGGCACCTCTTTCTTGACAAACCAAATGAAAATAA
CACAGAAAGATAATTTGAAATTCTATCTTGATCTCACCGATGACTCGATA
CTAATTTCTGGTGACTCCAGTGAGGGTTGCAAAGTTATCACAGATGTAAA
CTTTTTGAGTGGAATTGTAAATCAGACATATAAACTAACTGGAACAATCT
TTGAAGATAATCTAACAATGGATCAAATCCAACATTACCAAAATAAAATT
TTCATTTACACAACAACCAAACCTTCAATTATGGTCAAGTTTTTTCAACT
AAAAGAAGATGGTTTCATAAAAGTGTTACACCAAATTGAATGCAGTTCTG
ATACAATTGAAGCCAAGCTAATGATACCGTTTGGGAATAAGGTGATGCTT
TATACCAAACAGGAAGCTGATAAAACTATAACATCTACAATCACAGACTT
GGCAACAGATAAATGTTTATACAAGACAAATTCTATCAAAAGTGTGATGC
CAGAGCTACAAACCATATTCTTGAACTGGAATTTAAAAGAGGTTATCAGG
ACAAAGACAGGATCTTCAAATTCTCTTGATATTTCAATGCATTATATTGG
TCAGAGAAAGAAAGTTCTTGATCTAAAAGAGATTAGTCGAATGTCAGCAT
TGAAACATTTTTCAAGAAATGAACTCTCAAGTTACATTCTGCCATATAGC
ATACGTCGAGAAATGGCATTGCAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031273XLOC_031273Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049266-proteinTCONS_00049266-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049266-exon-scaffold_154-1575043694:300618..302761TCONS_00049266-exon-scaffold_154-1575043694:300618..302761Clytia hemisphaericaexon
TCONS_00049266-exon-scaffold_154-1575043694:291506..291571TCONS_00049266-exon-scaffold_154-1575043694:291506..291571Clytia hemisphaericaexon
TCONS_00049266-exon-scaffold_154-1510915933:300618..302761TCONS_00049266-exon-scaffold_154-1510915933:300618..302761Clytia hemisphaericaexon
TCONS_00049266-exon-scaffold_154-1510915933:291506..291571TCONS_00049266-exon-scaffold_154-1510915933:291506..291571Clytia hemisphaericaexon
TCONS_00049266-exon-scaffold_154-1491911889:300618..302761TCONS_00049266-exon-scaffold_154-1491911889:300618..302761Clytia hemisphaericaexon
TCONS_00049266-exon-scaffold_154-1491911889:291506..291571TCONS_00049266-exon-scaffold_154-1491911889:291506..291571Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_154supercontigscaffold_154:291506..302761 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.33687 0.242054 0.140524 0.0392802 0.908576 0.472348 1.02576 0.981647 0.687274 2.60942 1.95795 4.5225 8.13625 4.01661 0.865821 0.410558 8.1057 19.5765 2.41247 8.63843 1.83423 2.60877 0.955457 1.14588 3.6549 2.78621 135.73 93.8457 21.8239 17.8041
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049266 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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