TCONS_00050452 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050452
Unique NameTCONS_00050452
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2512

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050452 ID=TCONS_00050452|Name=TCONS_00050452|organism=Clytia hemisphaerica|type=transcript|length=2512bp
CCGCTTGGTATCGTTGAAgatcatgatcaaaagaaacaaAGCTTTCATTA
GTTCAAACTTACAATGGCTGCGTTGGTACCATCTTTTATTTCCCTACTGT
CTCAATTTTCACGAATCATTATCAGACATTCCTCAAGCAAAAGTTATGAT
GTAAAGAAGCTAATTATACCCCTTCCTAAAACATCTCATATTGTCCTTAG
CAACGAGGTTGTCAGAGACagaaagttattttttattggtGATGTTCATG
GATGTTTAGATGAATTGAAAGAACTACTCCAAAAAGTAAACGAACGCTTT
TCAACTGAGGAATACCTACCTATATTTGTTGGAGATCTTGTAAACAAAGG
ACCTGAGAATGTTGGCTCACTTCAATATGTTAGAAATTTAGAGCATTTTG
CAGTCAAAGGAAACCACGATGCAGCTGCACTGAGAGAAGTACTCATGATT
GAAAAACATAATGATTATGATACGCCAGCCTGGTGGCAGTGGGTTAAAGG
TTTAAATTGTGATGACATTGATTATTTAAAGGAATTACCATACACATTAA
GTTTTCCAGATTTCAATGCAATTGTAGTACACGCAGGTCTTTTACCAAAA
GTTGATTTAGAGAATCAAAGTATCAAagatatgattttgatgagaaacAT
TGTTGAATTGGATGCAGAAAATTACCAGTCAGCAGAATCCCTTGACCAAG
GTAAACCTTGGGCATCATTATGGCCAGGACCAGAGCATATCTATTTTGGC
CATGATGCTAGACGAAAGTTTCAAAGTTACGAATTCGCAACTGGGCTAGA
TACAGGCTGTGTTTATGGTAACCAATTAACAGGCTTACTTTTGGATAAAG
AtggaacaaaagaaattatccaAGTGCAAGCTAAAAGTGTTTACCAGAAA
CCAACTGGTTAATCCtggttattttacattcattctCGAATTGAAATCac
acaattttatttttgtatattttgcaCAATTATTTAAGTTATTTTAACCA
ATGTAATATCTAAATTTATCTTGATTGATCGGCTTTTATATCAACTTTGT
AATAgattaaatttgaatttattaaggttctttgtttttttgggaaatca
gttgaaattgttttattttcaattttaaatttgaatttttaattcAGATT
AATTAActtaaattcaattgtttttctttatgcCACCTTTATCTGAAATC
TGTATCTGGTTTCTTTATATATAAGTATACCTAATTTTGCATTCATATAT
ATAGTAAACTATTCtcatttttagacaaaaaataTACTCATAAATGCAAC
TATCCACAACTTGAGAATCTTCAGTTTTTTACCCTAAAACTTGACATGGC
TACATTGGTGCAAAATCCGCCGCCATCTGTTACACCTGCTGCAGATGCAC
CTCCTCCTCAACAACAAGCTCAACCAACACAGCAACCGCAACAACATCAA
CAGCAACAGCACCACCACCATGGCGGTAATTACAACCAGCGTCAACAATT
CCACCATCACCAACATCAACACCATCGGCCACACCATCACCACCATAGGC
ACCCTAATTTCCAACATCACCACAACCGACAACACCACCATCATCATGCG
TCTTATACAGCAGCTGTCCCAATGATCTTTACGCAAGCTAATGGCAGTAC
AACCACTTCAACAAATTTATTCAAACAAATCAATATTATTCCAGGTCTAG
ATGCTGAAAATGCAATCGTTGATACAGGTGTAAGAGTTTTCAGACCAAAC
ACTCAAGTTCAAACACAAACTGCGCCTGCAGAGTACGATGGGAAACGAAT
GCGACGCTCCATTCAAAGGAGAACTGTGGATTATAATGCATCAACAATAC
AACTCTTAAAAcatcgATTATACAAAAGATCCATTCTTCAAAAACCAATT
GTACAATGTGACCCACTTTATTACACAGATATTGTTCAACCTCGCTCTTT
ACAACACAACCCAGTGAATTCTGTAACGTCAAGATTTGTAAGGGCGTCCA
CAAACAAAGTTAGATGTCCTGTGTTTACCGTTGCTtGGACACCTGAAGGC
AGAAGAGTTTTAACAGGGACAAGCAGCGGAGAATTTACACTATGGAATGG
ATTGACATTCAACTTTGAGACTATTCTTCAGGCACACGACAGTGCAGTTC
GAGCGATGGAGTGGTCTCACAACGATATGTGGCTTTTATCAGGAGATCAC
AATGGAATCATCAAATACTGGCAAAGCAATATGAATAATGTGAAACTAAT
ACAAGCTCACAATGACCCTATCAGAGGATTGAGTTTTTGTCCAACCGACA
ATAAATTTGTGACATGCTCTGATGATGGTCTACTTAAAGTGTGGGATTTT
TACCGATGCTTAGAAGAACGAGTGTTAAGAGGCCATGGAGCAGATGTTAA
ATGCGTAGGCTGGCATCCCTCAAAAAGTTTGGTAGCCTCCGGAAGCAAAG
ACAGTCAGCAGCCTCTCAAATTGTGGGATCCAAGATCAGCCAGCAGTCTA
GCAACAATGTAT
Run BLAST on NCBI

protein sequence of TCONS_00050452-protein

>TCONS_00050452-protein ID=TCONS_00050452-protein|Name=TCONS_00050452-protein|organism=Clytia hemisphaerica|type=polypeptide|length=389bp
MATLVQNPPPSVTPAADAPPPQQQAQPTQQPQQHQQQQHHHHGGNYNQRQ
QFHHHQHQHHRPHHHHHRHPNFQHHHNRQHHHHHASYTAAVPMIFTQANG
STTTSTNLFKQINIIPGLDAENAIVDTGVRVFRPNTQVQTQTAPAEYDGK
RMRRSIQRRTVDYNASTIQLLKHRLYKRSILQKPIVQCDPLYYTDIVQPR
SLQHNPVNSVTSRFVRASTNKVRCPVFTVAWTPEGRRVLTGTSSGEFTLW
NGLTFNFETILQAHDSAVRAMEWSHNDMWLLSGDHNGIIKYWQSNMNNVK
LIQAHNDPIRGLSFCPTDNKFVTCSDDGLLKVWDFYRCLEERVLRGHGAD
VKCVGWHPSKSLVASGSKDSQQPLKLWDPRSASSLATMY
Run BLAST on NCBI

transcript from alignment at scaffold_172:104983..114545+

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050452 ID=TCONS_00050452|Name=TCONS_00050452|organism=Clytia hemisphaerica|type=transcript|length=9563bp|location=Sequence derived from alignment at scaffold_172:104983..114545+ (Clytia hemisphaerica)
CCGCTTGGTATCGTTGAAgatcatgatcaaaagaaacaaAGGTAAAAAGG
TATAGGTAGAAAGCTTCTGGAGTAAATCTCTTTCTTGAGTGTTTggaaaa
tgggctcttccagaaaaatctTAGTGTATGTGGGGGGGGGAGGGATGACA
GGAATTTTCagatgaaaaaataactcaaattccaaaattttttatattGC
AGCGcctaaaaaattgtgagtatcgaTATCGATCAGATATAAGATATTGA
TTATTTCAATTAGATATCGATCCAAGTTTCATCGATATTATCAATTATTA
ACACTGTAAATCAATAAattatcgattaaaaaaatCTATGGTGATAATTT
AATTGAGTGCTAAAAAATTGTAAGCATCAATTAGCTATCGATTATcgttt
ttaatcgatatttaatcaatcgattaattatcgattagctatcgatttta
atcgataatcaATTTTATCGATTAGCGATTATTAACGTCTGGCATTAATT
GAAATCTTGAcattaggcggcaatcacaaatatcttcgttttgcgtcgcc
cgaccgactcctgaaaattgagtaaaattgagTCGGAGAGTCGGTAAATT
Cttcttactttttgttttgatgacgtttcctttgctcaaaatttttatta
ttgtcaatttttgtgagCGATTTCTAGCGTCCATGCATCgtttttagatt
tagatatcactgttgaaaacaatatttttagatacaaactttttgataag
aGAGATGCCTTTTCCCTTCTTCATTGTAAGGATGCCACATGCCGACAGTA
ACATCCCATCGTGCATTTTTTATGGATCcatcttttcagaaattttaagg
ATAGCACGTAGCACACTCATGTTTGAAGATATGACTCCTAGAGTCACTGA
GCTTTTCATTCGAATGCGAAACCAGGGAGCTTCAAATGCTTTCTTGAAGA
AGcaagttgtcaaatgtttttcgaaGTTTCCGGACTGTTTTATGAATTAT
GGGAAAACCGTCgaagaatttttacatattttcaaattgtgaaaCAAATG
GACCATATTGTGTGTGTGTGAAAAAagtccctgaaataatttgaatcccg
aataggggaatttcctgtagtcacgtgacaactaagctcatattctgaat
ttatttttggaatatcttcttgacatgtgaacttgcatccgttttttatt
tgaagtcaatccaaccatttcctgatgactggtaagctttttaaaaatgg
tctcTAAATTGAACTAACTccaaaaaaggggaatttcccatagccacgtg
acaactaagctcatattctgaattttcttttttggaatgtttttcttgac
atgtgaactNataggggaatttcccatagtcacgtgacaactaagctcat
attctgaattttcttttttggaatgtttttcttgacatgtgaacttgcat
ccgtttgttattcgaagtcaatccaaccatttcctgacatgtgaacttgc
attcGTTTGTTATTcaaagtcaatccaaccatttcctgatgactggtaag
cttttgaaaaaagtcactgaaataatttgaatcccgaataggggaatttc
ccgtagttACGtgactaagctcatattctgaatttttcttttttggaata
tctttcttGACATGGAACTtacatccgttttttatttcaagttaatatct
tttttcgttaAGTTTTCATTGAGCTTTTTCGAATCTCGAATGCGAATCCC
GAATACCGAATACCTAACTCCAGCGAATCTACCATGAGTTgaggctcttt
cattttttaatatcCCTGTTCGGGCAGAAAGTAGATTAAAATGCTATGTT
ATGCTATTATGGTCTATAAAAAAGAGAATGGAAGTAAAAGATGGGTATTT
ATGCTAaccatccctgtctcactgaaagTATCTTCTTTATCTCTAAGGAA
TGAAGACACAAACCTTGATTTATATTAGATTTATTTatattcttcctttt
tcttcttcgggatgtagaaaaaaatggatttcagatggttttggagtcat
tttttgctggattttttatgtctgagcaacagaaagtttgaaatatattG
TGCATTGTGTATCAAAAAGTCACCTTGTTTTGTTGTTCTAAATCTGATAT
CTAGTCCTTCTAGTTTAGATACAACCCTGTCCTATGAATGACCTATAAAA
TGTTTCAcaagaagaataaaattcatttctttcttttcaattattgcaag
tttcttgatttttgaagttcattttgggacatttcgcctgttttttcttc
cccgcctccttcttaaaaaaaattcacttttttctacgCCAATCAGATTC
CGCGTCTTTTTCCCGATCAGCCAATCACAGTGGCTTGCAGAGGGCATTAC
GTAATTCtttgtctggtctgtaattttgatgtttcctcgaatccaatgaa
ttttctttagcagAGTAATGGGGCCCACTAAACCTGCAAATGCAGCGATT
GTATTGGCTATCAAAAagccattttagatttttttgaaagccaGATAAAT
TGGGGACCAAACCGTGGGTCGGCCCATGTGGCTTAGCCCTGACCCTAGAT
CAGGTGCCCCTATGCACAGGCCACCCTAAACAGTTGTTTTTTACCCTTAA
CTATCGGCCGAGTCgttgcttttttttatatacagcAATTTTAGGACCTT
ACTTCAGTGGTCGTTTACTCAcggtttttgacagttttaacaaaagagtt
TGCCCTAAACTTCAGTTAGGTTATATTTTCACATTATATCAATTACACAA
TATTCTGAACTACTTGTTTATACGTTTGAATTTGAGCTCAAAACTCTTca
ttatgaaaatcaaaaaatttgaaaaatttgataaattttactcaaaattt
actTGCTATGCTCGTTAAAATTACCGGCTAACTTACatttccttatttgc
agcactgcatATTCAGGGTCATTGTTCTTGTTTACTCTATTACAAAAAGC
CTTTTTTTAATGAGGAGCTTATTTGTCTAATGTTCAGTATGAAAAATTAA
TATAAATTTGCTGTTTATTAAGGTATTGGGTACTGTTTTAATTACCGCTC
GCCAAAAATATTAATTATATTTATTAATTCTTTGTCAAACCAAACAATAA
TAGCTGCattttttttcactgttcaactatattttaattctttttcagtC
ATATTTAAATGACTCACACACTTccttctttttatttatttctagccagc
agcgtggtggcaggggggacTTTTTTGTATAAACTTTTTGTGAAATGTCT
TTTTTAGCTTTCATTAGTTCAAACTTACAATGGCTGCGTTGGTACCATCT
TTTATTTCCCTACTGTCTCAATTTTCACGAATCATTATCAGACATTCCTC
AAGCAAAAGTTATGATGTAAAGAAGCTAATTATACCCCTTCCTAAAACAT
CTCATATTGTCCTTAGCAACGAGGTTGTCAGAGACagaaagttatttttt
attggtGATGTTCATGGATGTTTAGATGAATTGAAAGAACTACTCCAAAA
AGTAAACGAACGCTTTTCAACTGAGGAATACCTACCTATATTTGTTGGAG
ATCTTGTAAACAAAGGACCTGAGAATGTTGGCTCACTTCAATATGTTAGA
AATTTAGAGCATTTTGCAGTCAAAGGAAACCACGATGCAGCTGCACTGAG
AGAAGTACTCATGATTGAAAAACATAATGATTATGATACGCCAGCCTGGT
GGCAGTGGGTTAAAGGTTTAAATTGTGATGACATTGATTATTTAAAGGAA
TTACCATACACATTAAGTTTTCCAGATTTCAATGCAATTGTAGTACACGC
AGGTCTTTTACCAAAAGTTGATTTAGAGAATCAAAGTATCAAagatatga
ttttgatgagaaacATTGTTGAATTGGATGCAGAAAATTACCAGTCAGCA
GAATCCCTTGACCAAGGTAAACCTTGGGCATCATTATGGCCAGGACCAGA
GCATATCTATTTTGGCCATGATGCTAGACGAAAGTTTCAAAGTTACGAAT
TCGCAACTGGGCTAGATACAGGCTGTGTTTATGGTAACCAATTAACAGGC
TTACTTTTGGATAAAGAtggaacaaaagaaattatccaAGTGCAAGCTAA
AAGTGTTTACCAGAAACCAACTGGTTAATCCtggttattttacattcatt
ctCGAATTGAAATCacacaattttatttttgtatattttgcaCAATTATT
TAAGTTATTTTAACCAATGTAATATCTAAATTTATCTTGATTGATCGGCT
TTTATATCAACTTTGTAATAgattaaatttgaatttattaaggttctttg
tttttttgggaaatcagttgaaattgttttattttcaattttaaatttga
atttttaattcAGATTAATTAActtaaattcaattgtttttctttatgcC
ACCTTTATCTGAAATCTGTATCTGGTTTCTTTATATATAAGTATACCTAA
TTTTGCATTCATATATATAGTAAACTATTCtcatttttagacaaaaaata
TACTCATAAATGCAACTATCCACAACTTGAGAATCTTCAGTTTTTTACCC
TAAAACTTGACATGGCTACATTGGTGCAAAATCCGCCGCCATCTGTTACA
CCTGCTGCAGATGCACCTCCTCCTCAACAACAAGCTCAACCAACACAGCA
ACCGCAACAACATCAACAGCAACAGCACCACCACCATGGCGGTAATTACA
ACCAGCGTCAACAATTCCACCATCACCAACATCAACACCATCGGCCACAC
CATCACCACCATAGGCACCCTAATTTCCAACATCACCACAACCGACAACA
CCACCATCATCATGCGTCTTATACAGCAGCTGTCCCAATGATCTTTACGC
AAGCTAATGGCAGTACAACCACTTCAACAAATTTATTCAAACAAATCAAT
ATTATTCCAGGTCTAGATGCTGAAAATGCAATCGTTGATACAGGTTAGTT
TGAGATTTGTTTTACCAGATGTGATATGTAGATACAGATTAGTTTGAGTT
GCTGTCTGAGTTTTATCAATGATTctcctattttttcaaaatgctaaaat
ataatTGGCTAAAACCAACAATTAAAAATTTGTCTTTTATACTAATATAG
TATTTGTTTTTAAGCTAtctttcatgcattttttttGGTTTATAGGTGTA
AGAGTTTTCAGACCAAACACTCAAGTTCAAACACAAACTGCGCCTGCAGA
GTACGATGGGAAACGAATGCGACGCTCCATTCAAAGGAGAACTGTGGATT
ATAATGCATCAACAATACAACTCTTAAAAGTATGTTCTTTTTATTGAGTT
TTTCTTCTCTCTTTGTGTGGTTGTGTATTATTTAAGAACAATTATTTTAA
ATCTTTATACCAAAAAAGGTATATTTGCATATTTATTAAAGGATTGAGGT
TCAAGGCGCGCCGTGGGCCTCTAAGAACCTGTCTTTTTACAATCGCTTGt
tgttacaattttctttaggtaaagttttgttctggggcttcccctaactt
taaattgaatgtttttgtctttcatttgagcattGAGCTCATGTGCTCTC
TTGCACAATTCTTTGATTGCCAGGTCTTCTGTTGCTCGATAGGATGAAGG
AGGGCCTTTGTATGTCGCGATGGCTCTCAAGACTTtgttcttgtcttctt
cattttcgaatacTACCTTGATTAGTCGATACTTCCCTTTCTCCTCTCTT
TCTTCATATTTATTGGTCTGTAAAATGTTCACAGTTAAATCTTTCAATCT
ATGGTAAGTGAACCCAtgaccttgcgcaccgtagttGAAAGCTCTGCCTT
CATGCTTGCTAGGACTGCTATTTACAATTTCTTTTGTCTCTTATTGTCTG
TGTTATTGTTTGCAAAGTTCAAGTTCTGCTTTCTATCTAATTCTTTTGAT
TAACATTCAATTCATTTTAGACCCactcatttttttctattttagcatcg
ATTATACAAAAGATCCATTCTTCAAAAACCAATTGTACAATGTGACCCAC
TTTATTACACAGATGTAAGTTATAAACATTGATGAAAACAACTGACTGAG
ATTTAAATCGGCAAACAAGAAGAATATCAATTAATAAGAaactatttcat
tgatttccCTTTTAATTGAATGCTCAAAAATTTATCGAACAGCCTAACTG
CATGGGGGTAGATCTATTTAATCCTGCAATAGGCTCTGATTTTTATTGTT
TGCAAGCACATTCTGGAAGTAAATTTATATTCATTTGggtataacttttg
atccaatggaccaaattttaaaaataacatattaaaatttaattttatct
ttcttctttccaacgcaaaaataattattattttttaattcataGTTTGA
AtgagaaaatcaaatttgaagagAGAAATATTTTGTGGCACACCCCGTAA
TTTAAGACAGTACTACTCCCTCCAttgtttttcttcttaaaaCATATCTT
TATTAAGGAGATTTGATTCTTTGGATTTTTATCATTTAGATTGTTCAACC
TCGCTCTTTACAACACAACCCAGTGAATTCTGTAACGTCAAGATTTGTAA
GGGCGTCCACAAACAAAGTTAGATGTCCTGTGTTTACCGTTGCTGTAAGA
ACTCTTTcttaaaaacatcatttttgttttattacatagcgtcagccccc
cctGCTGGTTGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNATACACTCACTCTTGTTAAAATGATAGcacttt
ttgaagttttcagCAGAAGTTGTTATGTGCTATTTTGTTAatccttttaa
acttttttcttagtGGACACCTGAAGGCAGAAGAGTTTTAACAGGGACAA
GCAGCGGAGAATTTACACTATGGAATGGATTGACATTCAACTTTGAGACT
ATTCTTCAGgtaatttaaattcttttttttgagATTGCGGCCGCATTCAA
AAGGCTCTTTTTTCCAACAATCGATCTGAAAGTAGGGGAGGGTGCCATTC
ATTCActctggattgctccacttaccctatccttctctttaattactgaa
catcaagcagagcagtatcaagtaccattttgtaaAAGTacaaatctttg
gtatgaccaaGCCAGGGATTGAACTCGCAACCTAGCGCACTATAGCCAAA
TACTCTACCCTTGCATTGCGGTTGCTTAAAATATTAGATATCTctgaaaa
aatactttgataTTAAGAGATGTACTATTTCAGGCTTTTTTATTGACTCC
TTATTGACTCTTTATTGACTCGGTAGCAGTTTATCATCATTTAAGATTTA
GCTGACGAGATTTTAGCTGATGTAAACCACTTTAAACCACATGATTGAAT
TCCAGGTATGAATTTGTCTGTTTCATTATTTACAGGCACACGACAGTGCA
GTTCGAGCGATGGAGTGGTCTCACAACGATATGTGGCTTTTATCAGGAGA
TCACAATGGAATCATCAAATACTGGCAAAGCAATATGAATAATGTGAAAC
TAATACAAGCTCACAATGACCCTATCAGAGGATTGAGGTGTGTACTTTTG
CTCGTTATTTATAAATCAGGGGGATGATATTATCGTGTTATAGCCTGTTG
CAGAGGGATGTTTATTCACGATAACGATTCAAAAGAACTTTTATCAATTT
CGAAGACCAATAGTACTTAATGACTCTATTTTGATTATGAAATctatttt
aaatctattttgttGATTAAGCTTTTCTACCCTTTGTTTAATTAAAGGGT
CTGTTCTTTTCGTTTAGTTTTTGTCCAACCGACAATAAATTTGTGACATG
CTCTGATGATGGTCTACTTAAAGTGTGGGATTTTTACCGATGCTTAGAAG
AACGAGTGTTAAGAGGTAAATATTACCTTATATCATTTAAATTCAAAGTT
TACCATGTTGTAAAATTGAAACAAGAGAATCCCCAAAGTAGAGATttgta
aatcaaaataaacataGCACattattttcgttttttatttcGACCCCTTT
GGTGTCTAAGTTccatatttaaaagttttttccctgcaaagcaatatttt
tacaaagGAAAATATGCGACCTCTAACTAAACTTTGCGCTCTGAAATTGA
CGCCAAGTCCAGTGAAGTGAATCACTTAACCTCGCCATGGCTAGCTCTGT
ACCTAAGTCAAATGAGCCACCTTAACAATAAGGAATCTGCTGCTCAGATG
TAGTGATAATAATTATCATATTTTCTACACAGGCCATGGAGCAGATGTTA
AATGCGTAGGCTGGCATCCCTCAAAAAGTTTGGTAGCCTCCGGAAGCAAA
GACAGTCAGCAGCCTCTCAAATTGTGGGATCCAAGATCAGCCAGCAGTCT
AGCAACAATGTAT

Coding sequence (CDS) from alignment at scaffold_172:104983..114545+

>TCONS_00050452 ID=TCONS_00050452|Name=TCONS_00050452|organism=Clytia hemisphaerica|type=CDS|length=9336bp|location=Sequence derived from alignment at scaffold_172:104983..114545+ (Clytia hemisphaerica)
ATGGCTACATTGGTGCAAAATCCGCCGCCATCTGTTACACCTGCTGCAGA
TGCACCTCCTCCTCAACAACAAGCTCAACCAACACAGCAACCGCAACAAC
ATCAACAGCAACAGCACCACCACCATGGCGGTAATTACAACCAGCGTCAA
CAATTCCACCATCACCAACATCAACACCATCGGCCACACCATCACCACCA
TAGGCACCCTAATTTCCAACATCACCACAACCGACAACACCACCATCATC
ATGCGTCTTATACAGCAGCTGTCCCAATGATCTTTACGCAAGCTAATGGC
AGTACAACCACTTCAACAAATTTATTCAAACAAATCAATATTATTCCAGG
TCTAGATGCTGAAAATGCAATCGTTGATACAGGTGTAAGAGTTTTCAGAC
CAAACACTCAAGTTCAAACACAAACTGCGCCTGCAGAGTACGATGGGAAA
CGAATGCGACGCTCCATTCAAAGGAGAACTGTGGATTATAATGCATCAAC
AATACAACTCTTAAAAcatcgATTATACAAAAGATCCATTCTTCAAAAAC
CAATTGTACAATGTGACCCACTTTATTACACAGATATTGTTCAACCTCGC
TCTTTACAACACAACCCAGTGAATTCTGTAACGTCAAGATTTGTAAGGGC
GTCCACAAACAAAGTTAGATGTCCTGTGTTTACCGTTGCTtGGACACCTG
AAGGCAGAAGAGTTTTAACAGGGACAAGCAGCGGAGAATTTACACTATGG
AATGGATTGACATTCAACTTTGAGACTATTCTTCAGGCACACGACAGTGC
AGTTCGAGCGATGGAGTGGTCTCACAACGATATGTGGCTTTTATCAGGAG
ATCACAATGGAATCATCAAATACTGGCAAAGCAATATGAATAATGTGAAA
CTAATACAAGCTCACAATGACCCTATCAGAGGATTGAGTTTTTGTCCAAC
CGACAATAAATTTGTGACATGCTCTGATGATGGTCTACTTAAAGTGTGGG
ATTTTTACCGATGCTTAGAAGAACGAGTGTTAAGAGGCCATGGAGCAGAT
GTTAAATGCGTAGGCTGGCATCCCTCAAAAAGTTTGGTAGCCTCCGGAAG
CAAAGACAGTCAGCAGCCTCTCAAATTGTGGGATCCAAGATCAGCCAGCA
GTCTAGCAACAATGTATATGGCTACATTGGTGCAAAATCCGCCGCCATCT
GTTACACCTGCTGCAGATGCACCTCCTCCTCAACAACAAGCTCAACCAAC
ACAGCAACCGCAACAACATCAACAGCAACAGCACCACCACCATGGCGGTA
ATTACAACCAGCGTCAACAATTCCACCATCACCAACATCAACACCATCGG
CCACACCATCACCACCATAGGCACCCTAATTTCCAACATCACCACAACCG
ACAACACCACCATCATCATGCGTCTTATACAGCAGCTGTCCCAATGATCT
TTACGCAAGCTAATGGCAGTACAACCACTTCAACAAATTTATTCAAACAA
ATCAATATTATTCCAGGTCTAGATGCTGAAAATGCAATCGTTGATACAGG
TGTAAGAGTTTTCAGACCAAACACTCAAGTTCAAACACAAACTGCGCCTG
CAGAGTACGATGGGAAACGAATGCGACGCTCCATTCAAAGGAGAACTGTG
GATTATAATGCATCAACAATACAACTCTTAAAAcatcgATTATACAAAAG
ATCCATTCTTCAAAAACCAATTGTACAATGTGACCCACTTTATTACACAG
ATATTGTTCAACCTCGCTCTTTACAACACAACCCAGTGAATTCTGTAACG
TCAAGATTTGTAAGGGCGTCCACAAACAAAGTTAGATGTCCTGTGTTTAC
CGTTGCTtGGACACCTGAAGGCAGAAGAGTTTTAACAGGGACAAGCAGCG
GAGAATTTACACTATGGAATGGATTGACATTCAACTTTGAGACTATTCTT
CAGGCACACGACAGTGCAGTTCGAGCGATGGAGTGGTCTCACAACGATAT
GTGGCTTTTATCAGGAGATCACAATGGAATCATCAAATACTGGCAAAGCA
ATATGAATAATGTGAAACTAATACAAGCTCACAATGACCCTATCAGAGGA
TTGAGTTTTTGTCCAACCGACAATAAATTTGTGACATGCTCTGATGATGG
TCTACTTAAAGTGTGGGATTTTTACCGATGCTTAGAAGAACGAGTGTTAA
GAGGCCATGGAGCAGATGTTAAATGCGTAGGCTGGCATCCCTCAAAAAGT
TTGGTAGCCTCCGGAAGCAAAGACAGTCAGCAGCCTCTCAAATTGTGGGA
TCCAAGATCAGCCAGCAGTCTAGCAACAATGTATATGGCTACATTGGTGC
AAAATCCGCCGCCATCTGTTACACCTGCTGCAGATGCACCTCCTCCTCAA
CAACAAGCTCAACCAACACAGCAACCGCAACAACATCAACAGCAACAGCA
CCACCACCATGGCGGTAATTACAACCAGCGTCAACAATTCCACCATCACC
AACATCAACACCATCGGCCACACCATCACCACCATAGGCACCCTAATTTC
CAACATCACCACAACCGACAACACCACCATCATCATGCGTCTTATACAGC
AGCTGTCCCAATGATCTTTACGCAAGCTAATGGCAGTACAACCACTTCAA
CAAATTTATTCAAACAAATCAATATTATTCCAGGTCTAGATGCTGAAAAT
GCAATCGTTGATACAGGTGTAAGAGTTTTCAGACCAAACACTCAAGTTCA
AACACAAACTGCGCCTGCAGAGTACGATGGGAAACGAATGCGACGCTCCA
TTCAAAGGAGAACTGTGGATTATAATGCATCAACAATACAACTCTTAAAA
catcgATTATACAAAAGATCCATTCTTCAAAAACCAATTGTACAATGTGA
CCCACTTTATTACACAGATATTGTTCAACCTCGCTCTTTACAACACAACC
CAGTGAATTCTGTAACGTCAAGATTTGTAAGGGCGTCCACAAACAAAGTT
AGATGTCCTGTGTTTACCGTTGCTtGGACACCTGAAGGCAGAAGAGTTTT
AACAGGGACAAGCAGCGGAGAATTTACACTATGGAATGGATTGACATTCA
ACTTTGAGACTATTCTTCAGGCACACGACAGTGCAGTTCGAGCGATGGAG
TGGTCTCACAACGATATGTGGCTTTTATCAGGAGATCACAATGGAATCAT
CAAATACTGGCAAAGCAATATGAATAATGTGAAACTAATACAAGCTCACA
ATGACCCTATCAGAGGATTGAGTTTTTGTCCAACCGACAATAAATTTGTG
ACATGCTCTGATGATGGTCTACTTAAAGTGTGGGATTTTTACCGATGCTT
AGAAGAACGAGTGTTAAGAGGCCATGGAGCAGATGTTAAATGCGTAGGCT
GGCATCCCTCAAAAAGTTTGGTAGCCTCCGGAAGCAAAGACAGTCAGCAG
CCTCTCAAATTGTGGGATCCAAGATCAGCCAGCAGTCTAGCAACAATGTA
TATGGCTACATTGGTGCAAAATCCGCCGCCATCTGTTACACCTGCTGCAG
ATGCACCTCCTCCTCAACAACAAGCTCAACCAACACAGCAACCGCAACAA
CATCAACAGCAACAGCACCACCACCATGGCGGTAATTACAACCAGCGTCA
ACAATTCCACCATCACCAACATCAACACCATCGGCCACACCATCACCACC
ATAGGCACCCTAATTTCCAACATCACCACAACCGACAACACCACCATCAT
CATGCGTCTTATACAGCAGCTGTCCCAATGATCTTTACGCAAGCTAATGG
CAGTACAACCACTTCAACAAATTTATTCAAACAAATCAATATTATTCCAG
GTCTAGATGCTGAAAATGCAATCGTTGATACAGGTGTAAGAGTTTTCAGA
CCAAACACTCAAGTTCAAACACAAACTGCGCCTGCAGAGTACGATGGGAA
ACGAATGCGACGCTCCATTCAAAGGAGAACTGTGGATTATAATGCATCAA
CAATACAACTCTTAAAAcatcgATTATACAAAAGATCCATTCTTCAAAAA
CCAATTGTACAATGTGACCCACTTTATTACACAGATATTGTTCAACCTCG
CTCTTTACAACACAACCCAGTGAATTCTGTAACGTCAAGATTTGTAAGGG
CGTCCACAAACAAAGTTAGATGTCCTGTGTTTACCGTTGCTtGGACACCT
GAAGGCAGAAGAGTTTTAACAGGGACAAGCAGCGGAGAATTTACACTATG
GAATGGATTGACATTCAACTTTGAGACTATTCTTCAGGCACACGACAGTG
CAGTTCGAGCGATGGAGTGGTCTCACAACGATATGTGGCTTTTATCAGGA
GATCACAATGGAATCATCAAATACTGGCAAAGCAATATGAATAATGTGAA
ACTAATACAAGCTCACAATGACCCTATCAGAGGATTGAGTTTTTGTCCAA
CCGACAATAAATTTGTGACATGCTCTGATGATGGTCTACTTAAAGTGTGG
GATTTTTACCGATGCTTAGAAGAACGAGTGTTAAGAGGCCATGGAGCAGA
TGTTAAATGCGTAGGCTGGCATCCCTCAAAAAGTTTGGTAGCCTCCGGAA
GCAAAGACAGTCAGCAGCCTCTCAAATTGTGGGATCCAAGATCAGCCAGC
AGTCTAGCAACAATGTATATGGCTACATTGGTGCAAAATCCGCCGCCATC
TGTTACACCTGCTGCAGATGCACCTCCTCCTCAACAACAAGCTCAACCAA
CACAGCAACCGCAACAACATCAACAGCAACAGCACCACCACCATGGCGGT
AATTACAACCAGCGTCAACAATTCCACCATCACCAACATCAACACCATCG
GCCACACCATCACCACCATAGGCACCCTAATTTCCAACATCACCACAACC
GACAACACCACCATCATCATGCGTCTTATACAGCAGCTGTCCCAATGATC
TTTACGCAAGCTAATGGCAGTACAACCACTTCAACAAATTTATTCAAACA
AATCAATATTATTCCAGGTCTAGATGCTGAAAATGCAATCGTTGATACAG
GTGTAAGAGTTTTCAGACCAAACACTCAAGTTCAAACACAAACTGCGCCT
GCAGAGTACGATGGGAAACGAATGCGACGCTCCATTCAAAGGAGAACTGT
GGATTATAATGCATCAACAATACAACTCTTAAAAcatcgATTATACAAAA
GATCCATTCTTCAAAAACCAATTGTACAATGTGACCCACTTTATTACACA
GATATTGTTCAACCTCGCTCTTTACAACACAACCCAGTGAATTCTGTAAC
GTCAAGATTTGTAAGGGCGTCCACAAACAAAGTTAGATGTCCTGTGTTTA
CCGTTGCTtGGACACCTGAAGGCAGAAGAGTTTTAACAGGGACAAGCAGC
GGAGAATTTACACTATGGAATGGATTGACATTCAACTTTGAGACTATTCT
TCAGGCACACGACAGTGCAGTTCGAGCGATGGAGTGGTCTCACAACGATA
TGTGGCTTTTATCAGGAGATCACAATGGAATCATCAAATACTGGCAAAGC
AATATGAATAATGTGAAACTAATACAAGCTCACAATGACCCTATCAGAGG
ATTGAGTTTTTGTCCAACCGACAATAAATTTGTGACATGCTCTGATGATG
GTCTACTTAAAGTGTGGGATTTTTACCGATGCTTAGAAGAACGAGTGTTA
AGAGGCCATGGAGCAGATGTTAAATGCGTAGGCTGGCATCCCTCAAAAAG
TTTGGTAGCCTCCGGAAGCAAAGACAGTCAGCAGCCTCTCAAATTGTGGG
ATCCAAGATCAGCCAGCAGTCTAGCAACAATGTATATGGCTACATTGGTG
CAAAATCCGCCGCCATCTGTTACACCTGCTGCAGATGCACCTCCTCCTCA
ACAACAAGCTCAACCAACACAGCAACCGCAACAACATCAACAGCAACAGC
ACCACCACCATGGCGGTAATTACAACCAGCGTCAACAATTCCACCATCAC
CAACATCAACACCATCGGCCACACCATCACCACCATAGGCACCCTAATTT
CCAACATCACCACAACCGACAACACCACCATCATCATGCGTCTTATACAG
CAGCTGTCCCAATGATCTTTACGCAAGCTAATGGCAGTACAACCACTTCA
ACAAATTTATTCAAACAAATCAATATTATTCCAGGTCTAGATGCTGAAAA
TGCAATCGTTGATACAGGTGTAAGAGTTTTCAGACCAAACACTCAAGTTC
AAACACAAACTGCGCCTGCAGAGTACGATGGGAAACGAATGCGACGCTCC
ATTCAAAGGAGAACTGTGGATTATAATGCATCAACAATACAACTCTTAAA
AcatcgATTATACAAAAGATCCATTCTTCAAAAACCAATTGTACAATGTG
ACCCACTTTATTACACAGATATTGTTCAACCTCGCTCTTTACAACACAAC
CCAGTGAATTCTGTAACGTCAAGATTTGTAAGGGCGTCCACAAACAAAGT
TAGATGTCCTGTGTTTACCGTTGCTtGGACACCTGAAGGCAGAAGAGTTT
TAACAGGGACAAGCAGCGGAGAATTTACACTATGGAATGGATTGACATTC
AACTTTGAGACTATTCTTCAGGCACACGACAGTGCAGTTCGAGCGATGGA
GTGGTCTCACAACGATATGTGGCTTTTATCAGGAGATCACAATGGAATCA
TCAAATACTGGCAAAGCAATATGAATAATGTGAAACTAATACAAGCTCAC
AATGACCCTATCAGAGGATTGAGTTTTTGTCCAACCGACAATAAATTTGT
GACATGCTCTGATGATGGTCTACTTAAAGTGTGGGATTTTTACCGATGCT
TAGAAGAACGAGTGTTAAGAGGCCATGGAGCAGATGTTAAATGCGTAGGC
TGGCATCCCTCAAAAAGTTTGGTAGCCTCCGGAAGCAAAGACAGTCAGCA
GCCTCTCAAATTGTGGGATCCAAGATCAGCCAGCAGTCTAGCAACAATGT
ATATGGCTACATTGGTGCAAAATCCGCCGCCATCTGTTACACCTGCTGCA
GATGCACCTCCTCCTCAACAACAAGCTCAACCAACACAGCAACCGCAACA
ACATCAACAGCAACAGCACCACCACCATGGCGGTAATTACAACCAGCGTC
AACAATTCCACCATCACCAACATCAACACCATCGGCCACACCATCACCAC
CATAGGCACCCTAATTTCCAACATCACCACAACCGACAACACCACCATCA
TCATGCGTCTTATACAGCAGCTGTCCCAATGATCTTTACGCAAGCTAATG
GCAGTACAACCACTTCAACAAATTTATTCAAACAAATCAATATTATTCCA
GGTCTAGATGCTGAAAATGCAATCGTTGATACAGGTGTAAGAGTTTTCAG
ACCAAACACTCAAGTTCAAACACAAACTGCGCCTGCAGAGTACGATGGGA
AACGAATGCGACGCTCCATTCAAAGGAGAACTGTGGATTATAATGCATCA
ACAATACAACTCTTAAAAcatcgATTATACAAAAGATCCATTCTTCAAAA
ACCAATTGTACAATGTGACCCACTTTATTACACAGATATTGTTCAACCTC
GCTCTTTACAACACAACCCAGTGAATTCTGTAACGTCAAGATTTGTAAGG
GCGTCCACAAACAAAGTTAGATGTCCTGTGTTTACCGTTGCTtGGACACC
TGAAGGCAGAAGAGTTTTAACAGGGACAAGCAGCGGAGAATTTACACTAT
GGAATGGATTGACATTCAACTTTGAGACTATTCTTCAGGCACACGACAGT
GCAGTTCGAGCGATGGAGTGGTCTCACAACGATATGTGGCTTTTATCAGG
AGATCACAATGGAATCATCAAATACTGGCAAAGCAATATGAATAATGTGA
AACTAATACAAGCTCACAATGACCCTATCAGAGGATTGAGTTTTTGTCCA
ACCGACAATAAATTTGTGACATGCTCTGATGATGGTCTACTTAAAGTGTG
GGATTTTTACCGATGCTTAGAAGAACGAGTGTTAAGAGGCCATGGAGCAG
ATGTTAAATGCGTAGGCTGGCATCCCTCAAAAAGTTTGGTAGCCTCCGGA
AGCAAAGACAGTCAGCAGCCTCTCAAATTGTGGGATCCAAGATCAGCCAG
CAGTCTAGCAACAATGTATATGGCTACATTGGTGCAAAATCCGCCGCCAT
CTGTTACACCTGCTGCAGATGCACCTCCTCCTCAACAACAAGCTCAACCA
ACACAGCAACCGCAACAACATCAACAGCAACAGCACCACCACCATGGCGG
TAATTACAACCAGCGTCAACAATTCCACCATCACCAACATCAACACCATC
GGCCACACCATCACCACCATAGGCACCCTAATTTCCAACATCACCACAAC
CGACAACACCACCATCATCATGCGTCTTATACAGCAGCTGTCCCAATGAT
CTTTACGCAAGCTAATGGCAGTACAACCACTTCAACAAATTTATTCAAAC
AAATCAATATTATTCCAGGTCTAGATGCTGAAAATGCAATCGTTGATACA
GGTGTAAGAGTTTTCAGACCAAACACTCAAGTTCAAACACAAACTGCGCC
TGCAGAGTACGATGGGAAACGAATGCGACGCTCCATTCAAAGGAGAACTG
TGGATTATAATGCATCAACAATACAACTCTTAAAAcatcgATTATACAAA
AGATCCATTCTTCAAAAACCAATTGTACAATGTGACCCACTTTATTACAC
AGATATTGTTCAACCTCGCTCTTTACAACACAACCCAGTGAATTCTGTAA
CGTCAAGATTTGTAAGGGCGTCCACAAACAAAGTTAGATGTCCTGTGTTT
ACCGTTGCTtGGACACCTGAAGGCAGAAGAGTTTTAACAGGGACAAGCAG
CGGAGAATTTACACTATGGAATGGATTGACATTCAACTTTGAGACTATTC
TTCAGGCACACGACAGTGCAGTTCGAGCGATGGAGTGGTCTCACAACGAT
ATGTGGCTTTTATCAGGAGATCACAATGGAATCATCAAATACTGGCAAAG
CAATATGAATAATGTGAAACTAATACAAGCTCACAATGACCCTATCAGAG
GATTGAGTTTTTGTCCAACCGACAATAAATTTGTGACATGCTCTGATGAT
GGTCTACTTAAAGTGTGGGATTTTTACCGATGCTTAGAAGAACGAGTGTT
AAGAGGCCATGGAGCAGATGTTAAATGCGTAGGCTGGCATCCCTCAAAAA
GTTTGGTAGCCTCCGGAAGCAAAGACAGTCAGCAGCCTCTCAAATTGTGG
GATCCAAGATCAGCCAGCAGTCTAGCAACAATGTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031953XLOC_031953Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050452-exon-scaffold_172-1491911889:104983..105023TCONS_00050452-exon-scaffold_172-1491911889:104983..105023Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1510915933:104983..105023TCONS_00050452-exon-scaffold_172-1510915933:104983..105023Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1575043694:104983..105023TCONS_00050452-exon-scaffold_172-1575043694:104983..105023Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1491911889:108290..109975TCONS_00050452-exon-scaffold_172-1491911889:108290..109975Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1510915933:108290..109975TCONS_00050452-exon-scaffold_172-1510915933:108290..109975Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1575043694:108290..109975TCONS_00050452-exon-scaffold_172-1575043694:108290..109975Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1491911889:110178..110311TCONS_00050452-exon-scaffold_172-1491911889:110178..110311Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1510915933:110178..110311TCONS_00050452-exon-scaffold_172-1510915933:110178..110311Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1575043694:110178..110311TCONS_00050452-exon-scaffold_172-1575043694:110178..110311Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1491911889:110978..111046TCONS_00050452-exon-scaffold_172-1491911889:110978..111046Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1510915933:110978..111046TCONS_00050452-exon-scaffold_172-1510915933:110978..111046Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1575043694:110978..111046TCONS_00050452-exon-scaffold_172-1575043694:110978..111046Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1491911889:111522..111626TCONS_00050452-exon-scaffold_172-1491911889:111522..111626Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1510915933:111522..111626TCONS_00050452-exon-scaffold_172-1510915933:111522..111626Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1575043694:111522..111626TCONS_00050452-exon-scaffold_172-1575043694:111522..111626Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1491911889:112996..113091TCONS_00050452-exon-scaffold_172-1491911889:112996..113091Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1510915933:112996..113091TCONS_00050452-exon-scaffold_172-1510915933:112996..113091Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1575043694:112996..113091TCONS_00050452-exon-scaffold_172-1575043694:112996..113091Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1491911889:113568..113719TCONS_00050452-exon-scaffold_172-1491911889:113568..113719Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1510915933:113568..113719TCONS_00050452-exon-scaffold_172-1510915933:113568..113719Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1575043694:113568..113719TCONS_00050452-exon-scaffold_172-1575043694:113568..113719Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1491911889:113950..114047TCONS_00050452-exon-scaffold_172-1491911889:113950..114047Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1510915933:113950..114047TCONS_00050452-exon-scaffold_172-1510915933:113950..114047Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1575043694:113950..114047TCONS_00050452-exon-scaffold_172-1575043694:113950..114047Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1491911889:114415..114545TCONS_00050452-exon-scaffold_172-1491911889:114415..114545Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1510915933:114415..114545TCONS_00050452-exon-scaffold_172-1510915933:114415..114545Clytia hemisphaericaexon
TCONS_00050452-exon-scaffold_172-1575043694:114415..114545TCONS_00050452-exon-scaffold_172-1575043694:114415..114545Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050452-proteinTCONS_00050452-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_172supercontigscaffold_172:104983..114545 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.1993	28.5678	36.2941	29.3232	45.4894	34.6453	26.9937	29.5245	15.1413	18.6062	18.3025	13.0697	15.6707	18.8197	19.5103	22.8356	20.9721	20.9566	6.90485	9.39857	19.269	20.5139	35.3094	30.6138	24.9804	28.2339	9.11765	7.09125	20.0964	24.2182
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00050452 vs. Swiss-Prot (Human)
Match: WDR33 (pre-mRNA 3' end processing protein WDR33 OS=Homo sapiens GN=WDR33 PE=1 SV=2)

HSP 1 Score: 374.4 bits (960), Expect = 7.587e-112
Identity = 164/257 (63.81%), Postives = 203/257 (78.99%), Query Frame = 2 
Query: 1742 RPNTQVQTQTAPAEYDGKRMRRSIQRRTVDYNASTIQLLKHRLYKRSILQKPIVQCDPLYYTDIVQPRSLQHNPVNSVTSRFVRASTNKVRCPVFTVAWTPEGRRVLTGTSSGEFTLWNGLTFNFETILQAHDSAVRAMEWSHNDMWLLSGDHNGIIKYWQSNMNNVKLIQAHNDPIRGLSFCPTDNKFVTCSDDGLLKVWDFYRCLEERVLRGHGADVKCVGWHPSKSLVASGSKDSQQPLKLWDPRSASSLATMY 2512
            RP+   Q       +DGKRMR+++ R+T+DYN S I+ L++R+++R       +Q D  YY D+V P  + +NP+N+VT++FVR STNKV+CPVF V WTPEGRR++TG SSGEFTLWNGLTFNFETILQAHDS VRAM WSHNDMW+L+ DH G +KYWQSNMNNVK+ QAH + IR  SF PTDNKF TCSDDG +++WDF RC EER+LRGHGADVKCV WHP+K LV SGSKDSQQP+K WDP++  SLAT++
Sbjct:   29 RPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKCPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLH 285
The following BLAST results are available for this feature:
BLAST of TCONS_00050452 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WDR337.587e-11263.81pre-mRNA 3' end processing protein WDR33 OS=Homo s... [more]
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