TCONS_00050458 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050458
Unique NameTCONS_00050458
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1662

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050458 ID=TCONS_00050458|Name=TCONS_00050458|organism=Clytia hemisphaerica|type=transcript|length=1662bp
NAATTGGCTGCTCAGTGGATCACGTGACCGATTGGTCAAAGTCTTTGATA
TTCGAACGATGAAAGAAATTTCTACATTCCGCGGACACAAGAAAGAAGCT
GCTTCTGTGAATTGGCATCCCATCTACGAGAAGATGTTTGCAAGTGGAGG
TTCGGATGGATCCATCATGTTTTGGTTGATGGGGTGTGAAAAAGAGCTGG
GTTGTATAGAAGGAGCTCATGACGGCATGATCTGGGATTTGAAATGGCAT
CCGCTGGGCCATATTTTGTGCACTGGCTCCAACGATCATACCACGAAATT
TTGGACGCGGAATCGACCGGGAGACAAGATGCGAGACAAATACAATCTCA
ATGTTTTGCCAACTGGCTTTGAAGACGATTATGAGTACGAGATACCGAAC
ACATCACAATCAGAACTGGACACAACTCAGGAGACAGACACCTCCATCAA
CGAGAACAGCAAAGGTGAACAAGAACAGGAAGGGAAGCCAGATTTAAATT
CACCAGTGGTCAAAGCATTGTTGGAACAATCCACTCTCGAAGTTTCAAAA
CCCAAGGAAACAGACGTTCCTGCACAAATTTATACATTCTCGCGAAGTAA
TCAACTGAAGAAGTTCCGTATCGATCCGGGAAAACAAAGGCGGGCTATCG
AAGAAGCGGAAAAATCACAATACGATCACGAGAGACAGATGGAAGAAAAC
ATGGAGAAAACGAGAAATCGACGTGCGATGGAGCAACAACAACACGGAGG
AGGGTTTATACCAGGCGCTCCTTCGTTGCTTACCATGGATGTTCCTGTAC
CCGACTTTTTAGAAGGAGAGTATTGGGATGAAGGAGAAGAACCAAGTATG
CATGAAGCTAAAAGAAGGTACAACCAACGTACAAGGCCCAATGACGACGG
GATGGACCCTAATGCTGGACACATCGGCCCTTCTGGATTCTATCACGGCC
CTGATGAACATTTCGGACCTGGTGGCCCTCATGGACCACCACCAATGCGT
CCGCCCTTTGATGGAGGTCGATTTCCAGGACCACGGCCTCGCTTTGATGG
ACCGCCGCCGCCACACGATTTTCATGGTCCACCGCCAGGGCATTTCAACG
AAGGAGAGGGCTACGATGAGAATTGGGAAGGTGGAGGATACGAACCTCAT
CCTCCTTTCCAAGGACAATTTCAAGGTGGACCTAGATTCCGACCACATGG
TCCTCCTGGTCCAGGTTTTGGTCCTGGTGGACCCCGTCCTCCTCGCATGA
GAGGACCTCGCCCGAACTTCCACGGTGGTCGCCCACCACGCCCACCTTAT
TGAAAAGTTAGATTTTCATATGATGGAGAAGGAGTTACGGTTCCAATGAA
TGAATGGATGTGCTTCGGTGTCTTGTTAGAGCTCTGATAGAAAATGCAGT
GAGCCAATATTGCTGGTTATCTTCTTTTACTTGGAGATTCCTTGATTCGC
AGAGTTTTAGGAGCTTTTACCTAAAACAATTTTGATTATATTGTTTTACA
AATAAATTCCCTCCTttagtaaatatttttaatcTTGTAAGTAAAGAGAA
AAATGATgggattttatgaaaaaaatttattacttGTGTATTTCCAGTAC
CTTTTGTgcggttttttattttttgaaaaagaaaacatttatatTTTCTG
TTTCGTTAAATT
Run BLAST on NCBI

transcript from alignment at scaffold_172:116822..127055+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050458 ID=TCONS_00050458|Name=TCONS_00050458|organism=Clytia hemisphaerica|type=transcript|length=10234bp|location=Sequence derived from alignment at scaffold_172:116822..127055+ (Clytia hemisphaerica)
NAATTGGCTGCTCAGTGGATCACGTGACCGATTGGTCAAAGTCTTTGATA
TTCGAACGATGAAAGAAATTTCTACATTCCGCGGACACAAGAAAGAAGCT
GCTTGTGAGTTACTTTTTCTGTGTCTTAGTTGATAAGAAAATCAGGGAAT
ACTTCAATATCCTAGGTTTAAGATGGCTGCTACGTCTTTATATAAGGGTA
TTGGGAAAAGGGAAGTCCTTACTTAgatttggtgtttttaccaGAAGGAG
GGTTAATAACTTTAATAAAAAAGCGTTATTTTGTAATTTGGGattgtaaa
gttttttgctGCAAATAACTTCTACCTTGTTCGAGAGTTAAATACATTGC
CATTAAAGCCAGCCTTGTAAAAAATGCTTCATAAAATTTCTTCTTGAACC
TGTTTGAAAAGGTTGTCGAATCCAGGANAAAATGCTTCATAAAATTACTT
CTTGAACCTGTTTGAAAAGGTTGTCAAATCCTGGGTAAAGGAGGGTTTGT
CTTAAGATTAGCGACCTCCATTCATATTATGGTATAAATTTCATTATGAG
AAATTTTGTTTGACTTGTTTTTATAGCTGTGAATTGGCATCCCATCTACG
AGAAGATGTTTGCAAGTGGAGGTTCGGATGGATCCATCATGTTTTGGTTG
ATGGGGTGAGTGTTCTTCCTCTACACAGAATGTATCTCTTTACCACGTAC
CTTATTTGCTAAAAGTGAAGGTTTAAAATGTATGATTGACCAACACTGGA
GATTTTTCAATGGAAAAGCTTTTATACGCAAATTATCTCCGGTATCTTAA
AAAAAGGCCTTACAAACCATAAGAGGATGCGGACTTATAAGTGATTCTAT
TTTTCTTAGAGATGGTTGAAAACGTTATAGTTTTgtggtttgtttttgtt
ttgttggtgaAATCTATGTCAGCTAGGAACAGACTGCTTGCTTTTGTTAC
GGTTGAAGATTTTTCCTATCTGGGTTTGGCGGAATCGGTCAATTTAAAAG
CACGAAGAAATCGAAtaaattccaaattttaaagGAAGGGTGATCAAATT
TCAACATTATTTTCAGGTGTGAAAAAGAGCTGGGTTGTATAGAAGGAGCT
CATGACGGCATGATCTGGGATTTGAAATGGCATCCGCTGGGCCATATTTT
GTGCACTGGCTCCAACGATCATACCACGTAAGACGCTATTACTTATCTTT
TTTCACTAATAGTTCGGTGGCCCAGATCTTCCTATTTAGAATCGAGTACT
TTTTCGGTTATAAGATCGAGGTAgactccaggtaagtgacctaccggaca
tgcggcccttaagggtaggttttttggactttggaaagtgcgctgtaagg
gttgatttgtgagcaaatgggaaaaagtgcattgtaagggtgtaaaattt
gagaaaataccaaattttcaggtaaaatttgagaaatttcgaaaaattac
actataagggtcgattttcatccagatttttcctgcactgtaagggtccg
attttagagacctgatttttggccgaacgtacggtggttttcaaaatcga
gtgccccccccgggctcATCTTATGCGCAActtgttttaaaagtttctct
ATTNAAtctaaattatttcgtagaggtcgatagacctgtgaaatataatt
ctatgaataatgCACGTGCATAAGTAATAATAATGATTGTTTAAAGGATC
AAATTAAAGAGGGAATCgaagttttttaagaaaaataactaTGCTGGAAC
ATTTTGGATGTTGATATATATTTGGCaaggatttttttgtttttgatgtt
gTAATACAAGAAATCTTAATGAAAATATGCAGCGGTGTTCAAAGCACCGC
CGACATGTGCTAAAAGTTTTTGAACGACATCAAGTTTGCATGCGGTCGTT
CGACTTTTGGACAATGTGGAAAACAAGCTTTTCTTCTGTAAACAATCTTT
AAGATGTTTTAATCCAATTTGGATCGTGAGATCATGGTTCATTTGGATTG
CGTGTGAGTGGACAACGGTTTTTAGATCAGCCTCGGATTTGGCGAGTTGC
TCAGATAATTTGTCTTTGGTGATGTTTGACATTCTAATTTCACTATGTGC
TTCTGCCAACGATTTCTCATACTGTCCTCGTTGTTCACGCTTTTCTTTTA
CTAATTTCCGGATCCAGAAATCCAATCCGTTTTGTTCGACAATCATTTCT
TCCAAACGGCGTTCAAGAACTTCGTTCTGTTGATCCAAATCTTCGATGTC
TTTATCGGCAGACTCTAAATCTGCTTGGAAATCGTTGTTATCTTTCTCCA
AGAATTCTACTTTACACGCATACtcttccaactgaattttcaaCTCTTGC
ATTTGTCGCATGGACTGCTCAAATACGGCTCGTTCTCTACGGGAATTTTC
CTCGATTTTTTCATTAGCAACACGAAGCATGTTTTTTAGCTGGATATTGT
CTTGATCTTGTCGATTAATTTTCTGTTTGTAACTGGCAAGTTCAGTTTCG
AGTTGCCTGATTTGTCCAGCTCCAATAAGGGAGGTTTTTTGACTCACTTC
GCTTCGAAGATCGTCGTTTTCAATCTTGAGTTGGTGATTCTGTTGAACGA
GTTCCTCAATTTGctgaaattaagaaaaaaagaaatttttaaaagacgAT
GTAAATTTCCAAGCAGTTTTTCAAAGTTTATGCATACGGTTAACACTGTT
GAGTTTGAATTGGAAAACTTAGCTAAAGATACTCTCAACTAACCTGTCTA
GCTTGTTCGTAGAGTTCGCGGTAATTTACTTCGTTTGTTTTCTCCATCTT
GGTAGAGAAATGAAGACAAACAATTTGTCCTTAACTGACTTTCTTGATAA
AgtctttcttatttttttacaattttcacaaTTACTTGAGATGAAGTCTC
TCACTATCTTCCAAGGAAtaatttatcaaacaaaattatTCTTAATAACA
ATACTATCGACTACACTTGTCGCTTTCTGGGAAGATTTTGAAAACATTGA
TTCGCAAAAAATGTtaattaacaaaaaatatatatttgacgtcagtttga
AATATTCGACGTCACAATTTGATGACGTCTTGTCCCTTTCGAAGTTTGGT
ACATTCCATTTTCGCTAACCGTAGTTTTCAAACGCTGTGTAATAATTTGT
AATTACAGAAATCCTTGAAGGGTTCGCTTGCAGTGCCTTTGATCAGTATG
TTTCATGCTTTTGTCTCTGTTTAAGCCCCTTCCAGGAGACCACCGCCATA
TCTAGCGTGTAGCGAATACAGTAAACAATTAAACAAATCGACTGTTGGTC
AAGGAGAAGTGACTGTTTAAAACACTCTCTTAATTTGTTATAGGAAATTT
TGGACGCGGAATCGACCGGGAGACAAGATGCGAGACAAATACAATCTCAA
TGTTTTGCCAACTGGCTTTGAAGACGATTATGGTATGTCTTTTTATTGTT
ACATTTATTTTGGTTGGTTCTCctttatcaattttttattgATTAAATCC
ATTTCCCCTGCCACGAGCTATAGTTTAACttatatttttgcatttctgaa
AAAATACCTGACTTTACTAGGATGCAGATCCTTTCTagatcaagtaccat
tttaagCACAGTCATGGATATAAGTACGGATTAATACTGAACCAATTTTT
TTGTAGAGTACGAGATACCGAACACATCACAATCAGAACTGGACACAACT
CAGGAGACAGACACCTCCATCAACGAGAACAGCAAAGGTATTAGACTTag
agtcgtttataatccgtgtgtaatacagtaataagGGTGTTATATGGTAA
TACGATAATTATTACGGGATAACATCAGTTTGTNTGGTCAAGGAGAAGTG
ACTGTTTAAAACACTCTCTTAATTTGTTATAGGAAATTTTGGACGCGGAA
TCGACCGGGAGACAAGATGCGAGACAAATACAATCTCAATGTTTTGCCAA
CTGGCTTTGAAGACGATTATGGTATGTCTTTTTATTGTTACATTTATTTT
GGTTGGTTCTCctttatcaattttttattgATTAAATCCATTTCCCCTGC
CACGAGCTATAGTTTAActtatatttttgtatttctgaaaaaataCCTGA
CTTTACTAGGATGCAGATCCTTTCTagatcaagtaccattttaagCACAG
TCATGGATATAAGTACGGATTAATACTGAACCAATTTTTTTGTAGAGTAC
GAGATACCGAACACATCACAATCAGAACTGGACACCACTCAGGAGACAGA
CACCTCCATCAACGAGAACAGCAAAGGTATTAGACTTagagtcgtttata
atccgtgtaatacagtaatgtgggtgttatatgataatacgataattgtt
acgggataacaTCAGTTTGAATAAACCTTCACTCGGCTCTCAATTTACAA
ATAGGAATTTTCCCCATGTATTACTACGCTATTTTCTCAGCCAATTTTCA
ACTTCGGCTTTGACTTGGAATCCGCCATTTATATTTCACCAGAGGTTTTA
CATCTATCAAAAGCAATTTCTACCTGATGTGCTGCATTTTCGTAATTTGC
CAggttaccgtattacttcgaataaacgccccttcttttaaacgcccctc
gaataaacgcgcctcctaaaaggaaaattatttaataaacgcccccctca
aataaacgcccccttcaaATAATCGCCCTTTTAggagaggggcgtttatt
agaaacttgtgactttaatacttcaataccagtgttaactgggtttgaaa
aggaatattttagtcatttcttgtaaccagagcagttttcgaCGCAATTT
TAAtcgttgaaccaaagaaattttgcactaaaatcctaataaagaactaa
aacaaagggtatatttgctctaaattttcgactttagactaaaataattc
aataatCACCCCCTTCTTttcccttcttttaaacgccccctcgaataaag
gCATcttctaaaatcgaaaaaaattaaataaacgcccaataaacgccccg
ggcgtttattcgagtaATACggtatacagtggagtctcatAACTCGAACT
CGAACACGTACATGTACTCGGAACATTAATTTGTTTAAGGAGAGTTATAG
AGATTCGATTAAATGAGCCACTGGACCACTGGACTAGGTTTCAATGGCAT
TCCATCCTTACATAAGCCGATTCGTCCAACATTTTATATTGAATATGTAT
TTCTGTAAGcaatgtttgaaaataattcgaatttcaatatcgtcaaataa
aaattcttttgattctCAGGTGAACAAGAACAGGAAGGGAAGCCAGATTT
AAATTCACCAGTGGTCAAAGCATTGTTGGAACAATCCACTCTCGAAGTTT
CAAAACCCAAGGAAACAGACGTTCCTGTAAGAAGATTTTCACCTGTGTAc
tttgactctcgctaattcgaacttacTCTaatcatgaaggtaataaagat
atagatggagagaaaacgtctcggtaatgacctgaATGGTCgttaaaatc
ttttataaatctattcaaagcggcttttctttgatgtaccatcattggaa
gcaaaacacatcaatttataactttataagaacagaaagagactgtttgg
ttgattttgaaaaacttaattttgccgaaaatccttgttaaaatgcgatt
cgaaatagtttcaactgatgtaagactaaaagagtatattaatttcatag
ggacacatttttgggctggcattttgttaacattgagagttgcatcacat
tatcattgaaagtttcttatcttaaaatcttcacgtctaagttgGCAGCG
GTTTTCAAACTCTGACAAAAAAATANGTTCTAACTTTCAAAAAGATTGAA
TATTTCATTTTGAGTTATTGAGGGTTGCGAGTTATTTATGagggaaaaag
aaaagaatacaTTTCATGTTAAAGAGGTCTGAGCTAAGAAGACTCAGCTT
TATTACATTCTTAGACCTTGAAATAAACAAGGAAAAATGTACCCGAGATA
TTATGTCCTGTTGAAGAATATTCGATAATAtctttaacacccctgtgtca
gtgGTCCGGTCAGATTCGCCCCGGTCAGATTCGCCCCGGTCGATAACCCG
GTGTAAAAATCGAGTGAAGAACAATGGGAATCTCAACCCGGGCAAAAAAC
GAGAACTTTATCAAAAACCCCGATTTTTCTAAAGTGGTGAATGGCACAAA
CCCAGGGAAAAATCCTGCTNcttattcccaaagcaaccaaacagctgttt
gcttccgatgataaatcagaatagaacaaaaggcattgactctccatcta
tctttattacctacATGCTCTAATGGGGAATTTCGAATGTTCGAATTACA
Tagagattcaaattatagaaagtatattgagtgggtttctccttgacggg
gactgggaACAAGTTCGAATTCTATAAAGATTGATTCGAATGATAGAAGT
TCGATTAAGAGATATTCTGCTGCACTTTTGATGAATGAAGTTCAATGTGT
AACTCAAGTTAATTTGAGAGGTTCTAACTTTCAAAAAGATTGAATATTTC
ATTTTGAGTTATTGAGGGTTGCGAGTTATTTATGagggaaaaagaaaaga
atacaTTTCATGTTAAAGAGGTCTGAGCTAAAAAGACTCAGCTTTATTAC
ATTCTTAGACCTTGAAATAAACAAGGAAAAATGTACCCGAGATATTATGT
CCTGTTGAAGAATATTCGATAATAtctttaacacccctgtgtcagtgGTC
CGGTCAGATTCGCCCCGGTCAGATTCGCCCCGGTCGATAACCCGGTGTAA
AAATCGAGTGAAGAACAATGGGAATCTCAACCCGGGCAAAAAACGAGAAC
TTTATCAAAAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGACCCAGCG
ACTGAAATCTCTACCCCGGTGGATATTTCTCATTTCAAAGTCACCCCGGT
GAACTTTTAAGACCCAAtgggttactgagacaggggtgttcagGGTGCAT
TTTGAACACTTTCTCTAGACTCCAAAATGTTAATGACAAATTGAACAACA
CAATACCTaatcaataattatttttatgCTAGGCACAAATTTATACATTC
TCGCGAAGTAATCAACTGAAGAAGTTCCGTATCGATCCGGGAAAACAAAG
GCGGGCTATCGAAGAAGCGGAAAAATCACAATACGATCACGAGAGACAGA
TGGAAGAAAACATGGAGAAAACGAGAAGTAAGAAGCCTAGTTTATTTTGA
TTCTTATTTTGAACTAAATCCGAATGGATATGTTGTTTTAGGCAGCCCAT
CTTCcctggaaatgaaaaaaattcaacggAAAATGTTATGTTACCATCAA
CTTCCTCTTTTATCTAAATTATAAGATTTACAATTTTTAACCATCAGAGC
TTTCGTTTAATACACTAGACTAGCAACAATCTTTTGTTgattatattcat
gatatgcaacattGCAATATCTTCTGACATTAAATCATGgttccaacagc
tgattggttgtaagtggcGTAAAATTAGTCAATAcatcacttgcaaccaa
tcagctgttgggtccgtggaagacattgcaatggtgcatatcatgaattc
ttttttgaaatttgcaaaACAAGGACAATTTGGAGTTTCTTGCCAGAGAG
CGAATTTCATTTGTCTATTTGAGGTCAGTTAGACATTTGATAATTTATCA
CCGCGCTCCTTTATTTTTGTTCAGATCGACGTGCGATGGAGCAACAACAA
CACGGAGGAGGGTTTATACCAGGCGCTCCTTCGTTGCTTACCATGGATGT
TCCTGTACCCGACTTTTTAGAAGGTAAAACAACGATTTAGATTTTTCTTG
ATATATTGAACTTCCATTTACCCACCATTCTAAAAGTAGTAGAAAGAGAA
AGATTTGAAAGTATATTTCAAAGTATGTGAACACTTTTTCCTCTATTAAA
TGatgtatatataatatatgtagCACCAGTACTTGAAACAGgcctctttt
tcttcttcatcagttttcttcttcaatttgtaaaataatgaaataatttt
aGGCTTATAACAATCCACTCATTACTCGCTTTCCAACGAGGTGGAAATTT
GTGAAAGTAAAGTCAAATTAAGTTTCCACATACTTTATAGACAGAAttta
gaaagaaaaattgatttgTGCTTTATCCTGAATAACTTTTTTGACTCGTT
TTATGCAAATTACAACAAAGCTAATCAACTGAGTGTTACTAGTTGATTAC
CAGGAAACTTGGTAAATTTGTCCACCTTTTTCTATAGGAGAGTATTGGGA
TGAAGGAGAAGAACCAAGTATGCATGAAGCTAAAAGAAGGTACAACCAAC
GTACAAGGCCCAATGACGACGGGATGGACCCTAATGCTGGACACATCGGC
CCTTCTGGATTCTATCACGGCCCTGATGAACATTTCGGACCTGGTGGCCC
TCATGGACCACCACCAATGCGTCCGCCCTTTGATGGAGGTCGATTTCCAG
GACCACGGCCTCGCTTTGATGGACCGCCGCCGCCACACGATTTTCATGGT
CCACCGCCAGGGCATTTCAACGAAGGAGAGGGCTACGATGAGAATTGGGA
AGGTGGAGGATACGAACCTCATCCTCCTTTCCAAGGACAATTTCAAGGTG
GACCTAGATTCCGACCACATGGTCCTCCTGGTCCAGGTTTTGGTCCTGGT
GGACCCCGTCCTCCTCGCATGAGAGGACCTCGCCCGAACTTCCACGGTGG
TCGCCCACCACGCCCACCTTATTGAAAAGTTAGATTTTCATATGATGGAG
AAGGAGTTACGGTTCCAATGAATGAATGGATGTGCTTCGGTGTCTTGTTA
GAGCTCTGATAGAAAATGCAGTGAGCCAATATTGCTGGTTATCTTCTTTT
ACTTGGAGATTCCTTGATTCGCAGAGTTTTAGGAGCTTTTACCTAAAACA
ATTTTGATTATATTGTTTTACAAATAAATTCCCTCCTttagtaaatattt
ttaatcTTGTAAGTAAAGAGAAAAATGATgggattttatgaaaaaaattt
attacttGTGTATTTCCAGTACCTTTTGTgcggttttttattttttgaaa
aagaaaacatttatatTTTCTGTTTCGTTAAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031954XLOC_031954Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050458-exon-scaffold_172-1491911889:116822..116925TCONS_00050458-exon-scaffold_172-1491911889:116822..116925Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1510915933:116822..116925TCONS_00050458-exon-scaffold_172-1510915933:116822..116925Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1575043694:116822..116925TCONS_00050458-exon-scaffold_172-1575043694:116822..116925Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1491911889:117398..117476TCONS_00050458-exon-scaffold_172-1491911889:117398..117476Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1510915933:117398..117476TCONS_00050458-exon-scaffold_172-1510915933:117398..117476Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1575043694:117398..117476TCONS_00050458-exon-scaffold_172-1575043694:117398..117476Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1491911889:117888..117998TCONS_00050458-exon-scaffold_172-1491911889:117888..117998Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1510915933:117888..117998TCONS_00050458-exon-scaffold_172-1510915933:117888..117998Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1575043694:117888..117998TCONS_00050458-exon-scaffold_172-1575043694:117888..117998Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1491911889:120165..120253TCONS_00050458-exon-scaffold_172-1491911889:120165..120253Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1510915933:120165..120253TCONS_00050458-exon-scaffold_172-1510915933:120165..120253Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1575043694:120165..120253TCONS_00050458-exon-scaffold_172-1575043694:120165..120253Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1491911889:120478..120535TCONS_00050458-exon-scaffold_172-1491911889:120478..120535Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1510915933:120478..120535TCONS_00050458-exon-scaffold_172-1510915933:120478..120535Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1575043694:120478..120535TCONS_00050458-exon-scaffold_172-1575043694:120478..120535Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1491911889:121075..121097TCONS_00050458-exon-scaffold_172-1491911889:121075..121097Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1510915933:121075..121097TCONS_00050458-exon-scaffold_172-1510915933:121075..121097Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1575043694:121075..121097TCONS_00050458-exon-scaffold_172-1575043694:121075..121097Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1491911889:122091..122197TCONS_00050458-exon-scaffold_172-1491911889:122091..122197Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1510915933:122091..122197TCONS_00050458-exon-scaffold_172-1510915933:122091..122197Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1575043694:122091..122197TCONS_00050458-exon-scaffold_172-1575043694:122091..122197Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1491911889:125004..125148TCONS_00050458-exon-scaffold_172-1491911889:125004..125148Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1510915933:125004..125148TCONS_00050458-exon-scaffold_172-1510915933:125004..125148Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1575043694:125004..125148TCONS_00050458-exon-scaffold_172-1575043694:125004..125148Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1491911889:125646..125744TCONS_00050458-exon-scaffold_172-1491911889:125646..125744Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1510915933:125646..125744TCONS_00050458-exon-scaffold_172-1510915933:125646..125744Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1575043694:125646..125744TCONS_00050458-exon-scaffold_172-1575043694:125646..125744Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1491911889:126209..127055TCONS_00050458-exon-scaffold_172-1491911889:126209..127055Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1510915933:126209..127055TCONS_00050458-exon-scaffold_172-1510915933:126209..127055Clytia hemisphaericaexon
TCONS_00050458-exon-scaffold_172-1575043694:126209..127055TCONS_00050458-exon-scaffold_172-1575043694:126209..127055Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_172supercontigscaffold_172:116822..127055 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	9.9363	10.0431	5.41796	6.15519	2.76834	4.71903	1.77685	2.13533	2.39727	4.6996	0.131616	0.231124	0.27116	0	0	0	0	0	0	0	10.2927	16.7037	0	0	0	0
Blast
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BLAST of TCONS_00050458 vs. Swiss-Prot (Human)
Match: WDR33 (pre-mRNA 3' end processing protein WDR33 OS=Homo sapiens GN=WDR33 PE=1 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 9.474e-58
Identity = 91/131 (69.47%), Postives = 110/131 (83.97%), Query Frame = 2 
Query:    2 NWLLSGSRDRLVKVFDIRTMKE-ISTFRGHKKEAASVNWHPIYEKMFASGGSDGSIMFWLMGCEKELGCIEGAHDGMIWDLKWHPLGHILCTGSNDHTTKFWTRNRPGDKMRDKYNLNVLPTGFEDDYEYE 391
            NWLL+ SRD L K+FDIR +KE +  FRGHKKEA +V WHP++E +FASGGSDGS++FW +G EKE+G +E AH+GMIW L WHPLGHILC+GSNDHT+KFWTRNRPGDKMRD+YNLN+LP   ED  EY+
Sbjct:  301 NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDGVEYD 431
The following BLAST results are available for this feature:
BLAST of TCONS_00050458 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WDR339.474e-5869.47pre-mRNA 3' end processing protein WDR33 OS=Homo s... [more]
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