TCONS_00050467 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00050467
Unique Name	TCONS_00050467
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3735

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_172:88634..99408-

transcript sequence

>TCONS_00050467 ID=TCONS_00050467|Name=TCONS_00050467|organism=Clytia hemisphaerica|type=transcript|length=3735bp
GGGGGTTTTAACCAAAGCTATTCCTTATATTCTGCAATTGCCAAAGGAGC
CAGAACTCTGAAATACAAtgatcaaatttcttttttgcttcCAGAGCAAC
TTTGTGACTTTTGATTCCACAGTTGGAACTATGTTATTTCTTCTGGATAT
TTGACAAAGAAACTTGCACCCTAGCAAACATTCCCGTATCTAAATCGCAA
TTTTGATTGAGGTTACGTTATCTCTGTCATTTACAATGGGTCAGAGATTC
TCCTACAATTTTATACATGGTACtgcaatttcaaaatcaaaatggcgaag
CTGAACTCGAGTCTGACAGCCATGGATTGGCTTCCTCAACTCTCTGTTGG
GGGAGCCTTGACAACTGGTAACCCTGCGAACATTAATCAAACACAACCCA
TGAAGGCTACCCAACGTGTACCCTTTGGACAATTTGATGTAACTGCAAAA
TATGATGGCACTTCAGAACGATTTGGAAAGTCAAAACCTCCATACAGTTA
TGCAAATCTGATAGCATTTGCTATTAACTCTACTGCTAAGAATAAAATGA
CTCTATCAGAAATATATCAATGGATATCTGAAAGTTTTCCTTACTATAAT
GAAACTAGCAATGGCTGGAAGaATTCCATCCGGCACAACCTATCATTGAA
TAAATGCTTTATCAAACTTCCTCGGACAAAAGATGACCCAGGAAAGGGCT
CTTACTGGGCAATAGACACTTCAAATATTCATACAAATTCAGAACAAGAT
TCTTACAAACAATCAACAAATCAAACCAAAttcaagctaaaaaatgatac
cAGACAACTATCACCATACGGTAACAACAGAGGTCATTCCCCTGGGAGGA
CTTCACCGATTGTTTCTCCATCATCGCCACAAAAGTTGAATAATTCTTTT
GAATCAACAAGTAGTTCAGATTACTCCAATCCAAATAGTGTCGGTTCATC
GCTTGAAACACCTCAAATATTTGTCAACAATCAATCTGCTGCAGCTCTTG
CCACTCAAGTAAACTCTACTAAACCCTCATCTCAAAAGACAGACCCCTCA
AGGCAATGTGCGTTAGACAATAAAGTTTTTGCAGAACATTTTAACTTGGA
CGATTTATCAGCATCCTTTAGAAGTTTATACAAATCAGTTTTCAGCCAAC
AGTCTTCTTCCTCGTCCATATCCTCGTCAGCTGGGATGAACTCGATCAGT
TCTGTTTCCTCTCAAAACTCAACACCCAAAGaaaaaaatattttctcatc
aCAACTGCAACCAACTTCATCATCAGGCGGTGCCAATCATTTGTCACATT
CTGGTCAATTGGCACCTGTCTCAATCACCGAGCCGTCAAACAGCATGTCT
GAGAAAGAAGTTCTAAGTACCATGGAAGCCTTAATGTCAAGTATGAATTC
TGGCGACTGGGGAAGCATTATGCCTGATCAGTTTTACAGTTTGATAGATT
CGTTACAGGAGATGGACGGGCTTGACCAGAAAGATATAGACTCTTTAGAA
GAGTCGTATACAAACTATTTGAAATTGCAAGGAACATTTGATTACCTTGA
TAATGATGATGTTGAATTAAAAGCAGAACTTCTTCAACCTTCTCATCACa
atattcaacaaaataatTTCAGTACAATCCCTGAAAATCATGTCAGCCCA
CATGGTAGTCCTTACACAAGTCCACTACCACCGCCTACTTTACAGCCAAA
TCCAAATATGTTAAACCATGGTCGAATGAGCCCTGCAAGTTCTGCAACAT
CACCAATGCCTACTTTAATGGACAGTAATGATTTAAACCACGTGTTACAG
CCTATGTATGCAAATTCTATGAGCCCTATTAATCCTAACAGTGTCTTAGG
TAAATCAACATCAAGCAATGGTTCAGTTGGAAGAAACATGGCAATGAATC
CGCCagtttcaaatcaaatgaatgcTCGATACTCCATGAATGCAAACAGC
CCAATGCAACCATCACCCTTGAATCATTACAGCCATTCTCCATCTACTTC
TCCCCAACCTCCGCCCTCTTACTCACCTCAACCACCTCAATACACCAACC
AAGGTTCGCCAGCTATGCAAATGAACCATTCCAATGAAATGAATCGTGCT
TTAATGCAAGGTAGTCCACAACcacctccgctctaccaacaaCCACAGCC
GCCAAGACAACCATCGCCAAGAACGGCTCATCAACAACCACGATCACAGA
ATCAACAATCGAGGAAACTTTACCAGCAtgttgaagatgaagaagatttT
GATTGGAATTCTCTCCTATGATGCaagaaataacaaaatattAGTTAAAT
CCCTTAAATATTCAAGAAATGGTTCCACCCACACCAGATTATGCATACAC
GTTATAttacaatacaatacaaaaaATGATTATTATGAATTACCACATTA
CCAGGGAAGGAATGAAATCCAATTGCTcaatgatttgaaaaatatagtcC
AACTagaatcaaaaaatattcaaatttaaagtaaaatttaatgTGATTGG
ATATGTTGAGTATTGGTTGAACACTCTTGCATCCTCAACAAAACTATTAA
TACTGGTTTTCAGTGAGGGTAATTCAGTTTTTATTTGCACTTATTTTTAT
GACGACCTCCTCTGCAAATGTATATAGATTAAGTTTTTTGGCAGGAAACC
CAGGGTGCTGGAAACAGATCCTGGCATCAGAAGAAAACTAAAACTGAAAT
GGAATTTTCCTTTAACAAAATGTTGAGAAAAAATGTAAAACGGAAAAATT
ATGTAGTATATTTATATTTTGAAAAAAACAAGTATTCTTACAGTACTGTA
TTTATATTTTTGCTTTTATTGTTTTAGTTTTTTTTGTTTTATGTTGTCTT
GAAATGGAACATTTTGCGCAGATTGTTTTCTTAATTTTTCATGATGGAGT
AGAAACTGGCTCAAGTTCTGAACCATATACAGCCGAGTCTCCATGATTCG
ATCAACTCTACATTACATTTCGATcgagttttatggtcccttcaatTAAC
AATGCCTCATAAATCTTACTccgtaactcgaaatttccttaactctaACA
AACCTGCGTcagagttaaagagactccattTTATCACCAATCACGACATG
AAATTAACTATATTGCCCTTTTGTGTTTACTGCGTGTGCAAGATTTCCAT
TACtcctttttttgttattttttgctcCAAGTTTTTATTAGGTGACAATT
TTTGCAGctatttattattttgatacAGTGATACTATTTTTTCTTTATAG
TGGGTTTTAAATAATGTGCTGGTGGTACAAACTTAACAAACAACCAAAAA
TAACGGTGTAGGCCAATCTAAAAAGGCTTCTTGATTGACATATCGCCAAG
GGACATTTTCCTTGATTCTCATTTTTTCGGCTAATTGAAAAATGATTCGC
AGATAACCTAAACCCTCTTTCAATACAATAAATGACAATATGTCATTTGT
AGGCTTTTCTGCCTTAAAATCACCTCACTTACTAGTTGATTTAATCGAAT
AGATTCTACGTTGTTTTAATGAAACTTGGTCTACCAATTTTTGGTTAGTT
TGTTCATTTGCatgaatttcaagaattttttttctttttgtaaatagGAA
CTTTTTGTATATGATGAATTTTTATGCATTTGGTTTGTTGTCTGTTCTAT
TCTCTTATGATCTTTAAAAAAGTCGGAAAGAATTGAAGAGCTCCGTGATG
ACATATTGttgagttttgaatttttttgaatggcA

Run BLAST on NCBI

transcript from alignment at scaffold_172:88634..99408-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00050467 ID=TCONS_00050467|Name=TCONS_00050467|organism=Clytia hemisphaerica|type=transcript|length=10775bp|location=Sequence derived from alignment at scaffold_172:88634..99408- (Clytia hemisphaerica)
GGGGGTTTTAACCAAAGCTATTCCTTATATTCTGCAATTGCCAAAGGAGC
CAGAACTCTGAAATACAATGATCAAATTTCTTTTTTGCTTCCAGAGCAAC
TTTGTGACTTTTGATTCCACAGTTGGAACTATGTTATTTCTTCTGGATAT
TTGACAAAGAAACTTGCACCCTAGCAAACATTCCCGTATCTAAATCGCAA
TTTTGATTGAGGTTACGTTATCTCTGTCATTTACAATGGGTCAGAGATTC
TCCTACAATTTTATACATGGTACTGCAATTTCAAAATCAAAATGGCGAAG
CTGAACTCGAGTCTGACAGCCATGGATTGGCTTCCTCAACTCTCTGTTGG
GGGAGCCTTGACAACTGGTAACCCTGCGAACATTAATCAAACACAACCCA
TGAAGGCTACCCAACGTGTACCCTTTGGACAATTTGATGTAACTGCAAAA
TATGATGGCACTTCAGAACGATTTGGAAAGTCAAAACCTCCATACAGTTA
TGCAAATCTGATAGCATTTGCTATTAACTCTACTGCTAAGAATAAAATGA
CTCTATCAGAAATATATCAATGGATATCTGAAAGTTTTCCTTACTATAAT
GAAACTAGCAATGGCTGGAAGGTGAATGTTTACATTTTTATTTATTTATT
GTGTTTTGTTTTGATTTAGCTATGTTTGTTCCTTTTGTCACAGTGTTGCA
ACTCTTGTAAACCAAGGCAATTGAATATCTCAAAAAGTCTACAGTCTATT
GGTCCTATATCATTCTGGTTGTATTTCCCACACAGCATGGTTAGCGGTAT
AGCCCTAACTTTTTCCGGTACTTGGGTGCACTTGGCAATTTTGAATTTGA
AAAAGTCCCGAACATTACTCGAACTAGCTTGCATATGTTCAGGCCAGGTT
TTTGGAAGTGAAAATCCAAAATTTTGTGGCTCAAATTGATTACCGTAAGT
TGGTCTAATATCGACATCCCTCGTCTAATTCCGACACCCTTCTTTAGAGA
CAGGAATATAATATGAAAGCTTGAGTTGAATCACTGATTGAAAAAAGATT
ATTCCTCTCTGACCACTAAGCAAAGAAAAACAGTTTTAACCTTTCTATCA
ATTTCAGCTGATAAAAAGGGTGTCGGAATTAGAGGAGGGCGGATGTCGAC
ATTAGACCAAGTTACGGTATTTTGGTATGTTTTCCAGCCATACCCTTGGT
CATTTTGTATTCTTTTCAGCAGTTAACCAGATTGCACAGTATACGTATGA
CAGAAATCATCTAGATCAAAAAGTAGTTGAGCCTACATTATCAGAGGATA
CCTTAAATCAGTCTAAATGTCAATATCCCTCTTTTAATTATGACACTTTT
TTTTAGAGCAGGTATCAATGGAAAGGTTGAGATTGCCGATTGAAACTATA
TTTCTTTGCCTAGTGGTCAGAGGAGAGGCACACATCCTTCAGTCAGTTAG
TCACACTAGCGTCCCGCGTATAAAAAATTAATGCTGCGAAAGCGCTATAT
CATTTACTTGACTCGCAAGCAAAATAATGCACCACAAAACTTTTAAAGGG
ATTCATGAAAAAATAACCCAGCACTTTTTAATGAAATTAACATTTTCAAA
AACTATGAAAAATTGCCCAAAATTTTAGCCTTAGATGAAAAATTTTTAGC
CAAGCCAACCTTGAAAACTAATTTGAAGATCAACTTCCCAAGAAAAAGAT
CTACGGGGGAGACGGAACCCACCTAGATTTGCGCACCGCCAGATAGGCTT
TTTCCTGGAAATTTTGCCGGACTTCGAACACTGACCCCTTTACCTGTGCG
GAATTTTTTAATTTTGCGTATAAACAAAGCCTTAAAAATTGAAGCGCTGT
CTCAGGAATTGAATGACAAAATTTGGTTGGTTAATGCTGCACGTTCGCAA
TCAGTCATTTTGTCTCATTTTAAGTTTTAATTATTGTCTCAGAAACTTGA
ACTTGATTCAGGTAACTCTCATCCTTGTTGTGGCAAATACATCCCGTACC
TTGAGTGGTCCTAGATTCAACAGCCCTGCCTAATTCCGCCTAATTCCGAC
CCCAAATAACAGTTATGAAAAAATTCTATGTTTACAAATCTTCCTTCTCC
AAGTTGAACGATAAACTATTGCAAGGACTCTCGAAACAAAACATCTAACA
TGATGGCTATAATGTCAAGATGTCAATTAATGTGATCAAAAAAGTGTGAG
TTGTAAAAATAATTACCTCTATTATTCTGAATCTGTTGTTCGTGTTTAAA
ACGTTAACAATTTATGTAATAAAAAATTATGTTTTGTATAAGAAGCACAA
TTATTATAATTTGGTTCAAATCAATGTGTATCAAATCTTTCAGTTTAGTT
GACACTTTGGTATCTTCATTGCGTTACAGCGAAAGGTTTGTTTTTGTTTT
AGTTTGTATCTTTGAAAGACCCCATCAGATTTAGGCAGGGCTGTCGGATT
TAGGATTACTCACGGTAGATGTCTGGATTTCCTAGTGTGACTAACATTGG
CAGTTCAACCCATTTCATTTTAAAGAAAATTGGTAGCCAGTCAAAGGTGC
TGACAGTGCCCATTTAAAAAAAGCTTCTATAGCTGTGAAATGTGCCTCAC
AGGCTCCTGCAATTCAACCAAATAAAATAGAAAAAAGAAGCACTGTTAAG
CTGTCTTTAGCAGGCTAGCTCTAAAGCTCTAAAAAAGCATCTAATAACAT
GAAAACAAACCAAAACTATTAAGTGTACTTACAAACATCAATTTGTCAGA
TCTAACAAAATGAATAACGACACTGTCATCATTGACAATCGAACAAAGGA
TTTTCTGTCAAGAGCCTTGAAAACATTTCAACAGCAAGCTAAGTTCAACA
ATTTTAGTGTGGTTCGAGGATTGAGTAGAGAACACTCCCATTACGTCCGC
AAGCTCCTGCACAGGTGAAAAACTTTCTTAATCTGTCAATCATTCTCTTA
AGCGAAGAGTACGCAAAGCAATTCTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTG
TTGTTTGGCAACTCCGCAAAAACAAACAAATACCATTTAGGCGTGAGACA
GCGAGGCACTAGCTTTTTTGTCGTGATACGTTGATTCAATTTGCGGAACG
TCTTTGATGAGGCGTAGGGTCAAGTGAATCTGTTTGTTCAGAGTTGTACG
TTTCTCGTTTCTGAAGCGTATCGTCGGCAACCAGCTGTTCATTTCGTACA
CTGGTCACAACCACAACGCAACGAAAGCAAAGAAAAGTTAAAAGCCAAAG
CTGATTTGAAAAGATTTCAGAAGAAACAGAATCTCATTCGTTTTTCAAGT
TTTTCAAGTCAACAGGTATTATGTTGATACTTTTGGTTTTCTCTTTAAAT
TTTTAAATCATTTTTGTAGTTTTTTGTATCTGTAATATATTGGGAACTTC
TTACAGTAGAGATTTTTTTTTTAAGTTATGTGTTTGTTTCTGGATGGTAT
TCAATTAACATTATCCCTTTATCCCTTTATTTTCATTTCTGGTTTTTAGT
TGTAATTTTGCTGCTCTATTCACAGCATTGGGTACAGAGTAAAAGTATGC
ATTTCTATCCTTGCACCTTTGCCAGGCAGTGCCCACTGGTGGCCTAATAG
GGCACTTTTTCTAATGTTTTTCCATTAAAAAGGCTTTTTCCACCAAAATT
TTAGAGATTTCAGGAGGGGCAGCATCTCTGTGTGAAACCCCCCCCCCTTT
GGAAAGCAAGGGAGTAGAACCATTTAAAAAATCAAAAATGGGAGGGGTCT
TTTTATAACGGGAGAGGTAAGCAATAAAGGGAGTTGAAGCTTTTAAAAGG
AGGATAAGGATTTCAGTATGAAAATTTGTACCAATTTGAGACTAAATTTT
CCTGGGAAAACATTTTTTACCGTTACTATTATTTTACAGGTTTGATATAA
AATAGGTTATGTTACACAAAAAATTATCCCTCTTTCCAAGTTCAGATAAT
CCTGGCTTTTCTTGTGTTCCAGGTTTTTTTGTAAAGAAGCCTAAGGAAAC
TAATTATGAGCACAACCAAGATTTTCTTCAATTCCAAGGGTTTGTCAAAT
AAATGTCCAAGGTTTTTGAGTAACCTGGTAGAGTGTTTAGAAAGTGTGGA
TATATTCAAACAATGAGGCCAGAGCACCAGAAAAAACCTTCACTGCTCTG
CACTGTTTGTTGTTTTCGCTGAAAAGTCTCCCCAACTTTTTGTTTGGCAT
CAGGAAATTTTTGTCAGATTTAATGATGTCAAACCATTACCAGTCATGTT
TTAGCATGATATATGGAATCAACATACGGATACAATATGAAAATTTGGCA
AAATATAGTTAGGGTTTTTTGATCTGCCTTGTGTGTGTGAATTAATATTA
TTTATTTCTTTTATTATTCAGAATTTTGAAGAAATCCTTTAATAAGCTGG
ACCAAGGTGTGCAAAACCTGCGCTAGTTTAAAAAATTGGAGCTGATCTAA
AAACATTAGAAAATTCTTTTAGAATACTTGTGCATGTGAGATATAAGTTG
TCCTCTCCTATATTACAAAAGATATCTCAACTTTTAAGAACAAACAAAGC
GTTGATATGGTAAAATTTCTTATTAAATATCTCGGCAACCTTTAGAACGA
TTTCAGAGTTGATGCCATAACAATAATTTCTGTATGCTTGGAAGATTTCT
TTGTTATTGCATCATAAATTGTTTAGATCGCACTTAATCATTCAGCAGTT
AAAAAGTATGTCCATTGCCTTTAGTACCAGATTTAAGTCTGGTTTAGCCA
GACAGGTTAGCCTGTCAAAACATTTTGGTATAACTCTAAAAGAAAACCGA
ACATGTAAAAATATATTTTATAACCCCCACAAGTTTTAATAAAGGTGCAA
AATGGAAACTCATTTGTACTTGGAAAGTTTCCAGTGGGCAATTGACCTTT
TATGCCCTTGAGGGGGTTCTTGCCAGGTGTGAACTTGAACAATAGCAACT
TCTCTGAATTTTCACTTGTTGTAAGAAATAGTAATTATTGTAATATTATC
CTTGCCTTCAGTATTTTTAAATCAGTTTAAATTTAAAAGAGCAAGCGAAA
TGAAGGTACCTCTGTTTGTGTAACCTGTGTTATTATCAGTCATATACCTG
TGTGGAAACTAATTTTTGCCGTTTTGGGTGTCGTCCAAGAAATTTAGGAA
ATCGAACTTTCATATGCTTATTCTATTACAGATTATTAATGAAATCTGTA
AAAGCCCTTTAGGAAAATGAAAGAATTTTCTTTATAATTAGTTAAGATAC
TACAAAAAGTCACCTTATAATAAGGTAACTGTCATCTAATTTTATAGTTT
AGTACTTTTGTATTGTTAATGGCTTGGTGAATTTCCCTTCCCTAACGAGC
ATAAACCTGAATGCGCATAATCGAGCGTTATTTTATGGTCCCTGGTTAGG
CTTCTCAATATTAGAATGAATTGATTTTGATTTCATTAGGTAAATTTTCC
TAAGCTTTCAAAAGTGCTTTACTTATCCCTTATTTTTTTGGGTAATATGA
TTTTAAGATTTAGAAGTTCCCAAATGACCTTTTAAAGAATGTTATATCAA
GGTAGTTTAATGCTCAATTTTTTCACTTTTGAATTTGCTATTTTCCCTTG
CATTGTTCAGGCTTGATAGTAACAAGTTCTTCGATACTTGTAGGTTTCAT
TGATAAAAGTTTGTTTGTCTTTTTTCCATTCATTACACAGAGGGTGCATA
GTGATTTTTTAATATCATTTTATGAGGAAAAAAAATTGTGTTTGAATTGA
CTTTAGAATGAATTATTAAGTTTTTAATGAAAATCTCATAAAGAGAAATC
ACAATGGCCAAAAATAAATATTTTCAAAATAAGAAATTAAGAAAGAAAAA
ATAGAAACAGTAAAATAGAACTTGAAAAAATAGAATACTATTTCAGTTTT
GCAATTAATTATTCATTGATTGTTCATTCTTATTTTTGTTCAATACAAGT
TCAATACAAATCATCAGTTCCTTCCTACTCTCACTTGACAGAATTAAATT
ATGACAATTAATATTTCAATTAGCAAATTAATGACTTTTGCATGAAATAG
ATTATTCAATTAAATCTATGTCGCACTCTTCCATTCATGAAATATATTTC
TCATTCATTTTGCAAATTATGTTTTTCATCAAGATTGTTTTTGTCTACTT
CTTATGATGCAATTTTCTTACAATGATAATTTGTTTTTGTTTTGTAGAAT
TCCATCCGGCACAACCTATCATTGAATAAATGCTTTATCAAACTTCCTCG
GACAAAAGATGACCCAGGAAAGGTAAAACAAAACCTGTCCTCTTTTGATT
TTGTTGAAACATTTATGCTAATTTGAATAAATTTCTCATCAAATCGAAAC
CCAAGAAAGTTTTTTTTAAATGAAACCCAATCTTGAACTTAAACTTACAG
CAACCATGAGACATGCTTCAGTTTTTCCTCGGAAACTCATTCTAACATAT
TCCTTTTCTTTTATCAGGGCTCTTACTGGGCAATAGACACTTCAAATATT
CATACAAATTCAGAACAAGATTCTTACAAACAATCAACAAATCAAACCAA
ATTCAAGCTAAAAAATGATACCAGAGTAAGAAGATTTCTTCTTTTTTTTT
AGTTTATTTTATTTTAAATGAAGAAACTTCTGGAAAATTATTTTTAAGAA
AAAATCCTTCATTTGAACTTTGAACTGAATGAACTTCTGAACTTTGATCT
CAATACATTACAACCTCTTTTATTTTCACAGCAACTATCACCATACGGTA
ACAACAGAGGTCATTCCCCTGGGAGGACTTCACCGATTGTTTCTCCATCA
TCGCCACAAAAGTTGAATAATTCTTTTGAATCAACAAGTAGTTCAGATTA
CTCCAATCCAAATAGTGTCGGTTCATCGCTTGAAACACCTCAAATATTTG
TCAACAATCAATCTGCTGCAGCTCTTGCCACTCAAGTAAACTCTACTAAA
CCCTCATCTCAAAAGACAGACCCCTCAAGGCAATGTGCGTTAGACAATAA
AGTTTTTGCAGAACATTTTAACTTGGACGATTTATCAGCATCCTTTAGAA
GTTTATACAAATCAGTTTTCAGCCAACAGTCTTCTTCCTCGTCCATATCC
TCGTCAGCTGGGATGAACTCGATCAGTTCTGTTTCCTCTCAAAACTCAAC
ACCCAAAGGTAAGTAGATTTTTTCAATATGAAAGCAAAATCTTATATTTT
TCCTAAGTAGTATGTTTTTGCTTCTAATCACAAGGTAACTACGCGATAGA
TGAGAACATATTCTAAAATACTGAACAATATTTAAACATATCCAAATTGT
TCTTTTTAGAAAAAAATATTTTCTCATCACAACTGCAACCAACTTCATCA
TCAGGCGGTGCCAATCATTTGTCACATTCTGGTCAATTGGCACCTGTCTC
AATCACCGAGCCGTCAAACAGCATGTCTGAGAAAGAAGTTCTAANACAAG
TAGTTCAGATTACTCCAATCCAAATAGTGTCGGTTCATCGCTTGAAACAC
CTCAAATATTTGTCAACAATCAATCTGCTGCAGCTCTTGCCACTCAAGTA
AACTCTACTAAACCCTCATCTCAAAAGACAGACCCCTCAAGGCAATGTGC
GTTAGACAATAAAGTTTTTGCAGAACATTTTAACTTGGACGATTTATCAG
CATCCTTTAGAAGTTTATACAAATCAGTTTTCAGCCAACAGTCTTCTTCC
TCGTCCATATCCTCGTCAGCTGGGATGAACTCGATCAGTTCTGTTTCCTC
TCAAAACTCAACACCCAAAGGTAAGTAGATTTTTTCAATATGAAAGCAAA
ATCTTATATTTTTCCTAAGTAGTATGTTTTTGCTTCTAATCACAAGGTAA
CTACGCGATAGATGAGAACATATTCTAAAATACTGAACAATATTTAAACA
TATCCAAATTGTTCTTTTTAGAAAAAAATATTTTCTCATCACAACTGCAA
CCAACTTCATCATCAGGCGGTGCCAATCATTTGTCACATTCTGGTCAATT
GGCACCTGTCTCAATCACCGAGCCGTCAAACAGCATGTCTGAGAAAGAAG
TTCTAAGTACCATGGAAGCCTTAATGTCAAGTATGAATTCTGGCGACTGG
GGAAGCATTATGCCTGATCAGTTTTACAGTTTGATAGATTCGTTACAGGA
GATGGACGGGCTTGACCAGAAAGATATAGACTCTTTAGAAGAGTCGTATA
CAAACTATTTGAAATTGCAAGGAACATTTGATTACCTTGATAATGATGAT
GTTGAATTAAAAGCAGAACTTCTTCAACCTTCTCATCACAATATTCAACA
AAATAATTTCAGTACAATCCCTGAAAATCATGTCAGCCCACATGGTAGTC
CTTACACAAGTCCACTACCACCGCCTACTTTACAGCCAAATCCAAATATG
TTAAACCATGGTCGAATGAGCCCTGCAAGTTCTGCAACATCACCAATGCC
TACTTTAATGGACAGTAATGATTTAAACCACGTGTTACAGCCTATGTATG
CAAATTCTATGAGCCCTATTAATCCTAACAGTGTCTTAGGTAAATCAACA
TCAAGCAATGGTTCAGTTGGAAGAAACATGGCAATGAATCCGCCAGTTTC
AAATCAAATGAATGCTCGATACTCCATGAATGCAAACAGCCCAATGCAAC
CATCACCCTTGAATCATTACAGCCATTCTCCATCTACTTCTCCCCAACCT
CCGCCCTCTTACTCACCTCAACCACCTCAATACACCAACCAAGGTTCGCC
AGCTATGCAAATGAACCATTCCAATGAAATGAATCGTGCTTTAATGCAAG
GTAGTCCACAACCACCTCCGCTCTACCAACAACCACAGCCGCCAAGACAA
CCATCGCCAAGAACGGCTCATCAACAACCACGATCACAGAATCAACAATC
GAGGAAACTTTACCAGCATGTTGAAGATGAAGAAGATTTTGATTGGAATT
CTCTCCTATGATGCAAGAAATAACAAAATATTAGTTAAATCCCTTAAATA
TTCAAGAAATGGTTCCACCCACACCAGATTATGCATACACGTTATATTAC
AATACAATACAAAAAATGATTATTATGAATTACCACATTACCAGGGAAGG
AATGAAATCCAATTGCTCAATGATTTGAAAAATATAGTCCAACTAGAATC
AAAAAATATTCAAATTTAAAGTAAAATTTAATGTGATTGGATATGTTGAG
TATTGGTTGAACACTCTTGCATCCTCAACAAAACTATTAATACTGGTTTT
CAGTGAGGGTAATTCAGTTTTTATTTGCACTTATTTTTATGACGACCTCC
TCTGCAAATGTATATAGATTAAGTTTTTTGGCAGGAAACCCAGGGTGCTG
GAAACAGATCCTGGCATCAGAAGAAAACTAAAACTGAAATGGAATTTTCC
TTTAACAAAATGTTGAGAAAAAATGTAAAACGGAAAAATTATGTAGTATA
TTTATATTTTGAAAAAAACAAGTATTCTTACAGTACTGTATTTATATTTT
TGCTTTTATTGTTTTAGTTTTTTTTGTTTTATGTTGTCTTGAAATGGAAC
ATTTTGCGCAGATTGTTTTCTTAATTTTTCATGATGGAGTAGAAACTGGC
TCAAGTTCTGAACCATATACAGCCGAGTCTCCATGATTCGATCAACTCTA
CATTACATTTCGATCGAGTTTTATGGTCCCTTCAATTAACAATGCCTCAT
AAATCTTACTCCGTAACTCGAAATTTCCTTAACTCTAACAAACCTGCGTC
AGAGTTAAAGAGACTCCATTTTATCACCAATCACGACATGAAATTAACTA
TATTGCCCTTTTGTGTTTACTGCGTGTGCAAGATTTCCATTACTCCTTTT
TTTGTTATTTTTTGCTCCAAGTTTTTATTAGGTGACAATTTTTGCAGCTA
TTTATTATTTTGATACAGTGATACTATTTTTTCTTTATAGTGGGTTTTAA
ATAATGTGCTGGTGGTACAAACTTAACAAACAACCAAAAATAACGGTGTA
GGCCAATCTAAAAAGGCTTCTTGATTGACATATCGCCAAGGGACATTTTC
CTTGATTCTCATTTTTTCGGCTAATTGAAAAATGATTCGCAGATAACCTA
AACCCTCTTTCAATACAATAAATGACAATATGTCATTTGTAGGCTTTTCT
GCCTTAAAATCACCTCACTTACTAGTTGATTTAATCGAATAGATTCTACG
TTGTTTTAATGAAACTTGGTCTACCAATTTTTGGTTAGTTTGTTCATTTG
CATGAATTTCAAGAATTTTTTTTCTTTTTGTAAATAGGAACTTTTTGTAT
ATGATGAATTTTTATGCATTTGGTTTGTTGTCTGTTCTATTCTCTTATGA
TCTTTAAAAAAGTCGGAAAGAATTGAAGAGCTCCGTGATGACATATTGTT
GAGTTTTGAATTTTTTTGAATGGCA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_031959	XLOC_031959	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_172	supercontig	scaffold_172:88634..99408 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.40934	6.10294	7.3709	8.02492	44.4922	32.3706	33.3231	36.1256	15.426	21.9501	17.034	12.0887	16.4507	15.9907	14.4378	20.2702	16.4662	12.3561	13.6158	17.4155	14.5243	13.8083	8.84858	10.887	10.5652	12.2444	14.6107	13.3254	10.4642	9.88764

Blast

[Close]

BLAST of TCONS_00050467 vs. Swiss-Prot (Human)
Match: FOXJ3 (Forkhead box protein J3 OS=Homo sapiens GN=FOXJ3 PE=1 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 7.499e-43
Identity = 84/147 (57.14%), Postives = 102/147 (69.39%), Query Frame = 1

Query:  295 AKLNSSLTAMDWLPQLSVGGALTTGNPA-NINQTQPMKATQRV----PFGQFDVTAKYDGTSERFGKSKPPYSYANLIAFAINSTAKNKMTLSEIYQWISESFPYYNETSNGWKNSIRHNLSLNKCFIKLPRTKDDPGKGSYWAIDT 720
            ++L SSLT+MDWLPQL++  A+   +   N + T   K    +       Q +V    DG        KPPYSYA+LI FAINS+ K KMTLSEIYQWI ++FPYY E  +GWKNSIRHNLSLNKCF+K+PR+KDDPGKGSYWAIDT
Sbjct:   18 SELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGISKKNALLDPNTTLDQEEVQQHKDG--------KPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDT 156

The following BLAST results are available for this feature:

BLAST of TCONS_00050467 vs. Swiss-Prot (Human)

BLAST of TCONS_00050467 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FOXJ3	7.499e-43	57.14	Forkhead box protein J3 OS=Homo sapiens GN=FOXJ3 P...	[more]

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TCONS_00050467 (transcript) - C. hemisphaerica