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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050509 ID=TCONS_00050509|Name=TCONS_00050509|organism=Clytia hemisphaerica|type=transcript|length=665bp
GGCTAGCTAGGCTCCTTGGGAGAGAATAATCAATCTGGGCTGATCCtaaa
ttcagcaaaaaattgGGATCTCAAATTAAAGTCTTATAGTGCAGGCCGTT
TTCCAAATACAcggaaataaaaaattgagttcAATGGGGCTTTCTTAAAA
CCTTCAAACCACGTCTCTCACTAAATTGCGACCGATTCTCTTTCGCATTT
AGATTCACCAGTTTTGGTTCTTTTTTTCGGTCCCGTAGAATTCTCTGTTC
CCCTTTGCTCAAACAACTTCTTCCTATCTTCTACAACTGACCGATTTTTC
TTCCCAATTTTCTCGGGTTTCCCCTTTTCCACAGGTGTAGATTTTCCGCG
CTTCATTGCAACATCCGCAAGTTCGTAACCGTTTGCATTCTTGCCACTCT
GTTTTTTCTTTCCACTTTCTGAAGGTTTTAGTCCTGTATCCTGTTTATCT
GATTCCAGATTCGATTTTCCCGATTTCGACTTTTCGGATTGTTCATTGTG
GCTTCCGTCTTCATTCATTTCGTAAATAGTTTGTCTTACACTTGGTCCTT
TCGGTAAGCCACCGCCGTAATTAAACTCTTGCCCTGTGTTAAAAAAAGTA
GTGATattaatgacgtaatgttttctacggaaatgtTACATCGTattatg
tttttgattattAGA Run BLAST on NCBI transcript from alignment at scaffold_179:37139..38097+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050509 ID=TCONS_00050509|Name=TCONS_00050509|organism=Clytia hemisphaerica|type=transcript|length=959bp|location=Sequence derived from alignment at scaffold_179:37139..38097+ (Clytia hemisphaerica)
GGCTAGCTAGGCTCCTTGGGAGAGAATAATCAATCTGGGCTGATCCtaaa
ttcagcaaaaaattgGGATCTCAAATTAAAGTCTTATAGTGCAGGCCGTT
TTCCAAATACAcggaaataaaaaattgagttcAATGGGGCTTTCTTAAAA
CCTTCAAACCACGTCTCTCACTAAATTGCGACCGATTCTCTTTCGCATTT
AGATTCACCAGTTTTGGTTCTTTTTTTCGGTCCCGTAGAATTCTCTGTTC
CCCTTTGCTCAAACAACTTCTTCCTATCTTCTACAACTGACCGATTTTTC
TTCCCAATTTTCTCGGGTTTCCCCTTTTCCACAGGTGTAGATTTTCCGCG
CTTCATTGCAACATCCGCAAGTTCATAACCANTTCCAAATACAcggaaat
aaaaaattgagttcAATGGGGCTTTCTTAAAACCTTTAAACCACGTTTCT
CACTAAATCGCCACCGATTCTCTTTCGCATTTAGATTCAACAGTTTTGGT
TCTTTTTTTCGGTCCCGTAGAAATCTCTGTTCCTTTTTGCTCGAACAACT
TCTTCCTATCTTCTACAACTGAGCGATTTTTCTTCCCGATTTTCTCGGGT
TCGATTTTTGGTTTCCCCTTTTCCACAGGTGTAGATTTTCCGCGCTTCAT
TACAACATCCGCAAGTTCGTAACCGTTTGCATTCTTGCCACTCTGTTTTT
TCTTTCCACTTTCTGAAGGTTTTAGTCCTGTATCCTGTTTATCTGATTCC
AGATTCGATTTTCCCGATTTCGACTTTTCGGATTGTTCATTGTGGCTTCC
GTCTTCATTCATTTCGTAAATAGTTTGTCTTACACTTGGTCCTTTCGGTA
AGCCACCGCCGTAATTAAACTCTTGCCCTGTGTTAAAAAAAGTAGTGATa
ttaatgacgtaatgttttctacggaaatgtTACATCGTattatgtttttg
attattAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050509-exon-scaffold_179-1491911889:37139..37500 | TCONS_00050509-exon-scaffold_179-1491911889:37139..37500 | Clytia hemisphaerica | exon |
| TCONS_00050509-exon-scaffold_179-1510915933:37139..37500 | TCONS_00050509-exon-scaffold_179-1510915933:37139..37500 | Clytia hemisphaerica | exon |
| TCONS_00050509-exon-scaffold_179-1575043694:37139..37500 | TCONS_00050509-exon-scaffold_179-1575043694:37139..37500 | Clytia hemisphaerica | exon |
| TCONS_00050509-exon-scaffold_179-1491911889:37795..38097 | TCONS_00050509-exon-scaffold_179-1491911889:37795..38097 | Clytia hemisphaerica | exon |
| TCONS_00050509-exon-scaffold_179-1510915933:37795..38097 | TCONS_00050509-exon-scaffold_179-1510915933:37795..38097 | Clytia hemisphaerica | exon |
| TCONS_00050509-exon-scaffold_179-1575043694:37795..38097 | TCONS_00050509-exon-scaffold_179-1575043694:37795..38097 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_179 | supercontig | scaffold_179:37139..38097 + |
Blast
The following BLAST results are available for this feature:
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