TCONS_00050559 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050559
Unique NameTCONS_00050559
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1141

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050559 ID=TCONS_00050559|Name=TCONS_00050559|organism=Clytia hemisphaerica|type=transcript|length=1141bp
CTTTATCCTTTTCCGACATATTTCAGAGTATTTTACATCTATTTCAAATC
ACCAATATTGCCTGGACTTCACAGCATCGATGTTGAAACAAATTCTCTTG
CAAATAGATTGGTTTTATTTGTTGCTGATGGACTGAGGGCAGACAAACTT
TTTCACCGAAGCAATGCCAAACATTCTCAATTTCTAAGAGAAATCATCCA
AACTTATGGAAGATGGGGTGTCTCACACACTAGAGTACCAACCGAATCAA
GAGTAGGACATGTCTCCATGATGGCAGGGACATATGAAGATGTTTCTGCT
ATTACAAACGGTTGGCAAGACAATCCAGTTGACTTTGACTCATTCTTCAA
CCAATCAACCAATACATGGTGCTGGGGAAACCCAGATATTCtgaatatct
ttacaaaaaCTAATACCAAGAATTACCACCCATCTTCATATGATGCCAAA
GAAATCGACTTTGCTTCAAAGGACCCCTCGCTTCTTGACACTTGGGTCTT
TGATAAAGTGGAGAACTTTTTgaacaaatcaaatcaaaatctagaaatga
gaaatgaaTTACTGAAAACAAAGACTGTATTCTTTCTTCACTTAGTAGgc
ATTGATACAAATGGGCATGCTAAGAAACCAGATTCGAAAGAATACTTAGA
CAACATTGGGGTTGTTGACAAAGGCATTGCAAAGGCTTATCGACAGtttg
aagaatttttcaatcatgatgGTAGAACAGCTTACATTTTAACATCCGAC
CACGGTATGTCACCTTGGGGTGCTCACGGTTCAGGACTTCAAAGTGAAAC
TGAAACACCTTTTGTAGCTTGGGGATCTGGCATTAAGAAACCCACAAAAC
ACAGACACGTCAATAAGGATACACAAAGCATGGTTTGGGAATTGGAAGAT
TGGGAACGGACAGACATCCAACAAATCGATTTGGCTGATTTGATGTCTTT
TTTGATTGGGACCAGCTTCCCGGTCAATTCAGTAGGTAAATTACCTCACT
TTGTTTTGGATACAAACATGAAGCAAAAATCACTTGGAATGTATCACAAT
GTCAAACAGATTCAACAACAATATCATGCACacgaaaagaaaattcaaaa
ttctgcTCTCTTTTTCACACCATTTCCTGAAATCACGGAAG
Run BLAST on NCBI

transcript from alignment at scaffold_179:450863..468135-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050559 ID=TCONS_00050559|Name=TCONS_00050559|organism=Clytia hemisphaerica|type=transcript|length=17273bp|location=Sequence derived from alignment at scaffold_179:450863..468135- (Clytia hemisphaerica)
CTTTATCCTTTTCCGACATATTTCAGAGGTAATTATGGCTTATAAATCTA
CGAACATTTTCCAAACAACAATCATTTTTTAAATAAAAAATATATCCTGT
TATAGTTACCTGGGCAAGGATCGGTATTACAATCTTGTGATTCAGATGTA
TCTCCAGCACAAGGGTCTCCTCCGTGGGCAGGTGTTGGATTTGTACAAGT
TCTTGACCGTTCCTGTGATCCTGTTCCGCAAGTAGCAGTGCAAGCACCCC
AAGTTCCCCAAGCAGTCCAACCACCGTTGACTAAGAAAAAGGCAATTTAG
TCTAGAGATATTGAGACTTTATCCTTTTCCGACATATTTCAGAGGTTATT
ATGGCTTACAAATCTACGAGCAGTGTCCAAAACAACAATCATTTTTACAA
TAAAAAATTATAATTAGGGAATGGTCAGAAAGTAATTATGGCTTATAAAT
CTACGAACATTTTCCAAACAACAATAATTTTTACAATAAAAAATATACCC
TGTTATAATTAGGGAATGGTCAGAAAGTATCTACTAGGGACTACGAGGGG
ATGGAGGATTTCAGAGGGGATTCGAAAATTATTTTGAGGGTTTAGGGGGG
GTCAAAAATATTTCAATAGAAAAGGGGGGAGTGAAATGTTTTTGGACAAC
TCAAGAGATATAACTCAGGAGATCAAATTTCATGGTTTCACATTTGAAGA
TTTGAAAATTTTCCGGCTTAACGGCCGACATTATTCATATTTCGTATAAT
TGTTAATTCTGTATTAATGAAATACATCGTGATAGCCTCACCATTTCAGT
TTCTGTAGGTCTTGACATTGTGTAAACAATGGTTCAGTGGACTAAGAGAG
AATTTTTTTTAAGGAATTTCCCCTCTTACAATTTCATATTTCAGCATAGT
CTAGCCTTTTTAAAAAAAGCTGAAAATACAGTGGTTTATTTAGCGAATAA
AGTAGTTGAAAATTGAATTTTTTCTCCTGTCGTCGCAAACCATGGTTGCG
CCTTCTTAATCTCTGATAACATTATTACCTTTAAACTCAACTCAAAATAT
TACTTTTGTTATATAACGATATTGTACATCCATATGATTCAGACATTGAA
AGCCTCATTTCTGGACAGAATCGGTCCGAAAAAGAGCTATGTTTGAAGGA
AATCAGGAGTCCAAAATCAAAATTTCTCCTGTCGGTGCAAACCATGGTTT
GCACGTTTGAAATCAAGCCACTAGCTGCCTTCTAAATAAAAATGTAGTCC
TCCCCAGCATGAGTGCACGCCATTTGGATATCGAAGCTTATAGGATCACT
CACAATCTGGAAATTTACTGTAGTTTGAGCCTGATTTATATTTGACAAGT
CACCCTTATTCAAAGGTAAATATAAGTAAGTATAACCCTCACCTTATTAA
TCAGTCACTTAGAGTGTAGGGAGAAAAAAATTTTAGCAAAGGGGGGGGGG
AGTGCGAAATATTTTTAAACCTCTTTGAGGGGGGCTCGAAAAATCTTTCC
AGGTCAGGGGTTGGGTAGACGATAGATCGTCTAGGGGTTGGGGTGAAAAA
ATTTTCTTTTGATTTTTTGAAATATCCTCCACTCCCCCTAGTAGATAGTT
TCTGACCACTCCCTTAAGTACCTGGGCAAGGATTGGTATTGCAATCTTGT
GATTCAGATGTATCTCCAGCACAAGGGTCTCCTCCGTGGGCAGGTGTTGG
ATTTGTACAAGTTCTTGACCGTTCCTGTGATCCTGTTCCGCATGGATCAC
TGCAAGCACCCCAAGTTCCCCAAGCAGTCCAACCACCGTTGACTATAAAT
AAAATAATTATATTTCGTAAATTAGTTGTGCAGGTTGTTCGAATTAACTG
TGAAAGTCTGTAATCCCGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNCAAGGGGAAGTAGTTTTTGCTGCCTTTTTAG
GAGATTTTATAAGTGAAATTTTACTTTTATTTTTATTTTTTCGCCGACCG
ACCGACTCTCTTTTTTTGGTAGCTTGGCCCGTAAAACAACAAATTAAATT
GGCCTCGCCTAAGCTTCCAATACGTAACTTACAAATTGCAGTCAATCAGT
AAATCCTACAATAACCTTTACCTTTGCTTTGAGTCGAATACATGCGTGTT
ATTACTAACCCTAACTGTAACTCTCAAATGAACACCGTATTAATTCGAAT
AAATGTTCTTTGGGAAAAAAACCAATTCTACATCCTCTAGATAAACATTT
GTACTCAAGACAAAATAAGGCTCCTATTCGTGATATGTACCATTGCAATG
TCTTCCACAGACCCAACAGTTGATTGTTTGGAAGTGTCGTATTGACCGAT
TTTACGTCACTTACAACCAATCAGCTGTTGGGTCTGTGATGTAATGTCAG
AAGACATTGCAGACATTGCAATGTTACATATGATGAATTCACTTTATCAA
AATAACTTTGGTTATATATGATTTAATAAACGCCTCTTTCTCTTAAACGT
CCCCTGCGACTAAACGACGCCCTTAAAAATGAAAAAAAATTAATAAACGT
CTAGGGTATATGTTATTCATTTCATTACCGTCTAGTTCACATAANNNNNN
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NGATGGTTTGATGAAAGAAATTGCGATAATTACCAAGATAATATACATTT
TAGTAAAACTTCTCTGAGTTGCTTTGCTATGTCAATTTCGCTTTAGCTTC
GATTTTTCTCTCTCTCTCTTAATATCTTGCTTCTGCCAGGAATAAAATCT
TACTGATATGAAAATCTAACATATAATTTTTTATTAAGAATTTTTGAAAC
CCCTTTGAATACCCCTTTGGTTCCTATTAGTACAATAATTTTCCTCTACT
TTGCAAGGTATTAATATTTGAACTATAATCTTCTGATGAATAGATTTCGA
CCATCTGCTAATTGTTTTTTTCCTCTTCTTTATAAATTTGATTTGATTGA
CCTAGCTTTTGATTTTTGAAATGGTGCAATATCAGGACATCCTTGGTCTT
GACGTTAATTTTCTCCAGTCTAAGCATATTACATTGTCATCATTCTAAGC
TGTTGCTCTAAAACGGTAATCAAAAGTTTTCCGCATCTATTAGATACTCT
GAGTTTAGTTTCCATGATTCCCGTAGAGAATCCTATTACAGCAAAAGAAC
TAAGCAGACAATGGTTTTCCTAATGGAATCATCAGCTAGGAGACAGTTGT
TTTTGTGATGAGTAATTTTAGCCAAACATGACGGAGAGTGCATCCAGTAG
TGCATCCGCCACTTTTAATACACCCCCGTATGACAGACCATGTTGTACCA
ACTCCCCACTAGGATATTTAGTTAAAAACCATTCCCGGCGGGAAGAAATA
CTTTGAAATATTATTTTCTATTCAGAAAATCCACTTAAATTATATCCTAT
CCCGCGGATTTTAGAAATATGCTCCGTATGTAAGACGTAATAAAAATCAT
ACAAAATTTTGGAGCCAACTGAAGCTGTTACCATAGAGGTACTGCACTAA
TAATTAGATGAAAATCCCAGAAAGAAAAAAACACAAATAAATTGAAGAAT
CTGTCCGTTGTTAGGGTCCTTTTTTTTCTTCAAAACCAACAGAAATTACA
ATATTTAAAAATTTAGATCTTTTAGCCATACTACCTACCCTGAGTATCAG
AGGTTAAGTTTTCAAAGAATATATTAACCTCTGAAGACCAATAATAGAAA
TTTTATCGCGCATGTGTCAATCTAATCACTGTAGAAAGAATCAAAGATGA
AGAGCAAATATTACCATATTAATGTCTAGCAGATTGTATCAGTATGCAGT
TTACTATTTACGAATTCCGCAGAAACCTCCAAGTGCAATTGAAATGAGTT
TCTTTCGAAAGAAATCTTTTACATGATCCCCAATGTATAACAGTAATACT
AAACTTTTAATCATGGAAATTTCACTTTAATTGAATCGAAATAATATCCA
GACTTTATGTTATGACTCTCTATCACTTATCACTGACTCTTTTTAAAAAG
CTTTGATGACATTTTTTAGTTGTATTTTCAACGACGGGAATAAAAATATC
AACTTTGAACTTCATCCAAGATCTTGGATGGTCGTCATGGTTGCTTTTCT
CTGCGTTGATTGCGCGCTGAATAGAATCGTAGTCATTATAAAAAAAAATT
AAACAAAAAGCTAAAACAATACATTACCAGACCGTATTTTTTATAATGAC
TATGTTTTCACGGTACATACTACCATCAAAGTTGATACCATATTTTTGAT
AGCCCAGGCTCATTTTTTAGAAGAAAAGATCTGCTCTGATGTGTCTGTAG
TTAAGGGTTAAAAGGCGATAAAATATACCTATGTTAAGAGCACTGTTCCA
TCAGGGTCCGACTTTTTTACATTGATTACAGGGTCGCAGCTATATAATAC
AGGTATGCGCGACGAAAAAATGGGCTTTTAAAATCATACGCTTATAGCGC
AGCAAATAATCTGTGAAATTCATAACCTTTTGATTTTGCATTTCCCTCGA
ACCCAAAAAAATCAGGATTTCTGGTCAAATATTTTCACTGAAATTTACAC
CACCGGTGCATTTTATTAATTTCTTATACTGTGCCTAAAATTGCAACTTA
AATCTTTCCCAAATACCACTTATAATAATACAGTAAACTTTCACTTATTC
AAGCTTCTATTATTCGAACTTGATTCCAGTCCCGCTCAAGAAGAAACCCT
CTAAATACTTTCTATAATTCAATTTTCTCTGTAATTCGAACAAATAAAAT
ATGTCGTTCTTTATTGTCGTTTTTTCGTTTTTTGTCGTAATTTGTCGTTT
TTTGTCGTTTTTATTCGTTCCTCGTTTTTTCTTCGTTCTTTCATAGTGTC
TTTATGGTGGTCTCATTTTGGCACTTACACTCCCTCTTAGATTGTATCAC
GACCATCAACAAAACCAAAAAAAGTGGTAATAAAAGTGGCTCTGGGTGTG
ACATTGTTTTCAACCTGATTAGCGACCCCCCATTAGCGTCCAGGGATAGC
TTGGAAGAAAACGCCGAGACGACGTCTGATATCGGAGACCGCTAGTTTAG
GGTGGTGCAGAAAGTGTCTTCTAGACTTGGGAGGAGTGGAGGATATTTCA
AAAAATAAAAAAAAAATTTCACACCCCCTCCCCTAACCTGGAAATTTTTT
TCGAACCCCCTCCCTCAAAAGGTAAAATAAACAAGAAGCCGAAGCGGCAT
GAAGGCCCAGCTGACGTGGCAATAACCAAATGTCGTTTGTATCTGGTATA
TACCTTAAGGGCTCTGACCATAGTGAATTTTTCATAATTGCCGTGTTTAA
AATGTGTTTTCTGACTGATGTAACCAACAAAACTATGGCATGTTATACAT
TTTCTGTTAGACAAACTATTCCTGAATCTGAAAATTCAAAGATTGCATTG
AAAAAATTTGATGAAGAAGAAACTGAAGACTTTTGCGAGGAAGAGTATTT
CAACTTTGAAGAGCTTAGTTTCGGCGAAGAAAAAACATTTTGAAAATTTT
TTCGCAGTAGATGGTGTATCTTTTACCAAAAAATAAAAATTTTTGCGGAA
AAGTTTTGTAAATGCTTCTTTGTCTCGAAATCTTAACGCGTAGCATCATG
AAAAACATTCCAAACTTATTCAAATTTACACTCACATGAGCTGCATTTTA
GTATCCTTTAATGAGTTACAGCATAAGTTTACTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCAGGTTTG
AAAAATCCAGCCACCGTCCGTTTAGAGCGATAAATCCAAAATTAACCATT
TTCACGGCGTAGCATCATGAAAAACATTCCAAACTTATTCAAATTTACAC
ACGAGCTGCATTTTAGTATCCTTTAATAACTTACAACATAAGTTTACGTG
GAAAAATTTCCTGTCAGGTTTGAAAAATCCAGCCACCGACCGTTTTTAGA
GCGATAAATCCAAAATTGACCATCTTCACGGATAGCATCATGAAAAACAT
TCCAAACTTATTCAAATTTACACATGAGCTGCATTTTAGTATCGTTAAAT
GACTTACAACATAAGTTTACTTGAAAAAAGTCTCTGTCAAGCTGGAAATA
TAAAACTCCAACATCCAAATGCTCCCACTTGCTCCCTGACAGATTCGGCT
AATGCTTCAGATGCATCCGGCCGCGCGGGACGCGCGCATATACCGCGCGG
AGCGCGTAGCGCGTAGCATAGGGTTAGGGANNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGCAGCCGGTTTGGCCTAGT
GGATAGGGCATTGGTTTCGGAACCTATAGGTTCCCGGTTCGAGACCCCCT
TTGGTCACTATTCAACTTGAAAAAAATTCCAAGTCCAGCCGGATGCATCT
GAAGCTTTAGCCAAATGTTCCCTGACCTGACTCCATCCATCTTGAAAACA
TTAAAAAATACTTTGCCATAAAGAGAATGAAATTTGACTTTACTACCAAT
TCAATCCAATATAAGAGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNGGACTTGTTAATTTATTGCGCGCACAGGCTCCGACAAAGCCAAAAT
CTTTTCGGTCAGTTGCTTTTTAAAGGCCCACTTGCGCTGCGCGGCTGGGC
CAAAAATCTCGCGAGTAAGGGCGAGTTGTCACATATAGATCAGGTTTAAC
TGCAGTAAATTTCCATATTGTGAGTGATCCTAAATGAAGATATTGTGCAC
TCATGTGGGGAGGACTACATTATCGACCGCCGGATGCGGTTTCTTTCATA
GTGGTACGCTTATCTCGTTTTGCCTTGGCTCATTACTTTCGGTTTTTTTA
ACTACCTGAATGTCTTTTATTCGAAATTGAATACTTTAATGGGATAAATT
TTCGCGGGGATTAATTTTCGCGGATTTCGCGGATTTGGGTGTCATCNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCAATAGTGCCATCCGCGAAAATTAATCCCCGCGAAATCTTAAAAT
TTCGCGGATGAGCTCAACCGCGAAATTTAATCCCCGCGAAAATTTATCCC
ATTAAAGTAATCGAGACATGAAAAATGACTATATTGTAATCTGTTTTCAT
TGAATAATCTAAAATGTACTGGAGATGGACATGTAGGCGTTAATAATGTG
CACGCGCTTTTTCACGAGCGTGATGCGTGATGGAAGGCGGTCGTTTCAGT
GTGGTTTACATTCACACTGTGACCTAGTTATACAGAAGGTAGCCCGGGGT
CCACTTAAAGCTTTTCGATAGACTGGATGGCGAGATTAAGTAGCCCGGTA
GTATATTATAGTAATATGCTTTTGTTTAGGTGGACTGTAAAACAGTCCGC
CAGATTTTAGTCTTTTTTGGAAGGTAAAAACCCCGGGGGGGGGTACTAGG
TTTGCGAGGTGCCGGGTATGTCCGAGCCGCCCCTTTGAGAGACTTTTTCC
TAAATTTTGGTCCATTTTTTCCAAATTTTGGTTTGATTTTCACCAAATTT
TGGTCAAAATTCTTGGAAATCGTGACCCTTTGAGAGAGAAATTTTTGATT
TTTGTGATTTTGGGATCCTTTCAGAGACTAACTTTTGAATTTGTACCCCT
TTGAGAGACTTTTTCCTAAATTTTGGTCCATTTTTTCCAAATTTTGGTTT
GATTTTCACCAAATTTTGGTCAAAATTCTTGGAAATCGTGACCCTTTGAG
AGAGAAATTTTTGATTTTTGTGATTTTGGGATCCTTTCAGAGACTAACTT
TTGAATTTGTACCCCTTTGAGAGACTTTTTCCTAAATTTTGGTCCATTTT
TTCCAAATTTTGGTTTGATTTTCACCAAATTTTGGTCAAAATTCTTGGAA
ATCGTGACCCTTTGAGAGAGAAATTTTTGATTTTTGTGATTTTGGGATCC
TTTCAGAGACTAACTTTTGAATTTGTACCCCTTTGAGAGACTTTTTCCTA
AATTTTGGTCCATTTTTTCCAAATTTTGGTTTGATTTTCACCAAATTTTG
GTCAAAATTCTTGGAAATCGTGACCCTTTGAGAGAGAAATTTTTGATTTT
TGTGATTTTGGGATCCTTTCAGAGACTAACTTTTGAATTTGTACCCCTTT
GAGAGACTTTTGAGGAATGAGAGGAGGTACCCTTATGGCTCGCCCATACC
CCGCACCCCTTTTGCCTAAATACCCCCCCCCCCCCGGGGTAAAAACAGTA
TGAAGCCTATGAAGCAATATTTTTATTTGAAAATAAGGGATTGCAAATCT
GTTAATCGTGTTTGTTTCTCATTTTTGATTATATCTTTCAACTCTCCAAG
TAGTTTTATTGTTATTTGGATTTAAAATTTTTTTTCAAAATGGCGACCTC
GCCAAATGCTCCTAGTCTACTTCACTGAACTCAGCGTCATCAAAAATCAT
TAGAAAGCAAAGTTCAGCCAGAATAAGACTCTAGTCTATATAGAAGGCAG
CAAGTGGCTTGATTTCAAAGGTACAGGGGCAAAGAATTTAGTGACGATCT
GACTGGGTCTCAATGATATGCATACGATATACGATACAGGTGTGCATTTA
ATACGTACCCCTGCGAAGAATACGTCGACGTACCCTGCGCTAGATCGATT
ATCCTCTCTACGGTCTTTCGCTTCCGGCTAAAATGATGTAAACAAAGATG
GCGCGCTCTCAGGTGGTGATTTTATTGAGTGGAATTTTTTTACATATTTT
ATATCTTTCCTCAGTATTTTACATCTATTTCAAATCACCAATATTGCCTG
GACTTCACAGCATCGATGTTGAAACAAATTCTCTTGCAAATAGATTGGTT
TTATTTGTTGCTGATGGACTGAGGGCAGACAAACTTTTTCACCGAAGCAA
TGCCAAACATTCTCAATTTCTAAGAGAAATCATCCAAACTTATGGAAGAT
GGGGTGTCTCACACACTAGAGTACCAACCGAATCAAGAGTAGGACATGTC
TCCATGATGGCAGGGACATATGAAGATGTTTCTGCTATTACAAACGGTAT
TATTGATATTGTTTTTAATTTTAGGGGGCAGGCCAGCCTGGCGAAGGGGT
ACTACCAGACAGACAGGGTGCGAATCGAACAAATCAAACGCCAAATCGAT
TGAACACAATCAAACTCAATCGAATAATTGCAATTCAATTGTCAAACACA
ATCAAATTGTAATCAATCTGTCAATACCACCGTGAGATTGGGTAACTTGC
ATCAGTGGATAATGAAAACAAAAATGGTAGAGAGTAGAGCTGCGAGCGCA
GCTGCGTAGTTCATTTGGTTTGACATTTTGCTGCTTTGGTTGGTTATTCA
TTTGAGGGCTATGCATGTTAGCCTCCACTGATGCAAGTTACCCGATCTCA
CGGTATTACCCGCCCAGTAGAATTTACCGTTCGATGCTTTGATTACGTTT
GATATATTTGATTATTATGTTTGATTATGTTTCAGATTGATTCAATTGCA
TTCGCTCGCTTTAATTGCTCTTGTGTTGTACTTATACGCTCGCTCTTATC
TGATTTCTGATGGTGTACCGGTATTTGAGGATCATTTATTTTACAGAAGA
AATGAAGTTGTCTTTTTTGTCTTTTTTTTGCTATTTTTAATTCATGACTT
TCACCCCATGATTCATAGGCTTTCCCTTCTCCTGAAAATCCAGTATTCTG
AAACTTTCAGCTAAAAAAAAATGCATAAAAATCGACTTTCGTCATTTTTT
GTCATTTACAAACTCTTTTCCAGAACCACAAGTGAAAAAAAAGCAAAGTG
ACTGAACATGTTACTTTTTAAAAATGATTGACAGATGATATTTATGTTTT
TTTGCTGACAAACCATTTTTTCAAACCCGAGACTTTTGCGTCCATTGATA
CAGTTAGGGAAACCATCCAGGATCCTGTCATTCTATAAGCCAGCAAAAAC
TAAATGACACTTGTAAACTTAAATTTCCTACCATTTTCCATTGAAACAAC
CAAAAACATTGCTACTTCCCAAAGCCGGAGACCAAAACAAATTATCTTCC
AAGATTATGGCGCCCTTTTTGATCTATTCTTAAGGCCATCTAAAATAGTG
GAAAGAGTTGGGGAAAGACAAAGGCGTCTGCTGCTTCAACGGTGGTAACG
CCAAAACGCCCAATATGATCTTCCAACAGAAGGCAAGTTAGTTGCCGCGC
AAGTTAAATTATGCACTCCACTGCATCGCAAAACAAAGTCTGTTTTAATG
AATATCATTAATTATTAGAATATCTTATGTGCTTACCTTCAGTATACAGT
AAACTTTGAATGCTGCATTGAAAATGAAGAAGGTAAGAGGATAAAAAATG
CGATGGAAAATTTTCATTGTAACAGTTTGGTCAATCATTACTGAAAGTTT
GAAAAGGTTTTTCTAACGCAAAAAAGATTTTTCCAACCATTACACTGAGA
TTTTTCCAACCATCAAATATTTTACCAACCGTATACGGAAAAAAATACGC
TTCGCCACATAAACAGAAAAAGGACCTTACTCCATTATCACACTTTTTGT
TTTTTTTAAACCAGAATCAAATTCTGTAAAAAAGTGAAAGAAAAAAGGCA
TAACTCCAATCTTTATCATTTCCTAATTGAATCCTAGGGAAATTTTTCAT
TCCATTTGCTTGATAAAGCAAGAATCCTTAAGGATCAATAAAAAAGATTC
TCTATTTATTTCAAAGTATCCCTCAGATTTTACTGTAAGTTGGTCTAGTA
TTGACATCTGTCATCTAATTCCGAGTACCTTATTACAGCTCAGAATCGCT
GATTGAAAAATATTTTTTCCTGTCCAACTGCTAATTAGCAACTGATGATT
CCAACCTTCATATTTTAAAGAAGGGTGTCGGACAAGGATTAGACGAGTGA
TGTTGTGTCGTCATTAGACCAAAGATTTCTTGTCATGTAACCAACTAAAA
ATCTCCAAGGACAAAAATCCTCCCCAGGTATTCATATTGATTAAATTCAC
TCATTTAGGTTGGCAAGACAATCCAGTTGACTTTGACTCATTCTTCAACC
AATCAACCAATACATGGTGCTGGGGAAACCCAGATATTCTGAATATCTTT
ACAAAAACTAATACCAAGAATTACCACCCATCTTCATATGATGCCAAAGA
AATCGACTTTGCTTCAAAGGACCCCTCGCTTCTTGACACTTGGGTCTTTG
ATAAAGTGGAGAACTTTTTGAACAAATCAAATCAAAATCTAGAAATGAGA
AATGAATTACTGAAAACAAAGACTGTATTCTTTCTTCACTTAGTAGGTAA
GTCTCTCAATTGAAGAAGTGTTTTTTTTTCTATTAAGAATGTTCTGTTTT
TTTTTCTCAAAAAAATCCATTTCAGATGAACCAAGTTTTATGCTATTTAT
TTGAAATGTATTTATAAACTTTAAAAAAAATCATGGCCTATCTCATTCAA
ATATTTTTTCCAAAGGCATTGATACAAATGGGCATGCTAAGAAACCAGAT
TCGAAAGAATACTTAGACAACATTGGGGTTGTTGACAAAGGCATTGCAAA
GGCTTATCGACAGTTTGAAGAATTTTTCAATCATGATGGTAGAACAGCTT
ACATTTTAACATCCGACCACGGTATGTCACCTTGGGGTGCTCACGGTTCA
GGACTTCAAAGTGAAACTGAAACACCTTTTGTAGCTTGGGGATCTGGCAT
TAAGAAACCCACAAAACACAGACACGTCAATAAGGATACACAAAGCATGG
TTTGGGAATTGGAAGATTGGGAACGGACAGACATCCAACAAATCGATTTG
GCTGATTTGATGTCTTTTTTGATTGGTTTGTTTTCTCTCTAACTATGAGA
ATATTACTTCTATTCATTGGCCGACTCAAATTTTTCAGATTGCTATATAA
TATTTGCTCATGATAATCAAGACTAGATTCCGATTTGCCTCACGGTATAT
AAACCGAAGCAGTTGACTCCAGGGAGTATATATATAGATCTCTTTATTTT
ATTCTAATGTTTTTTTGTTTATTTTTTATTGTTTTTACAGGGACCAGCTT
CCCGGTCAATTCAGTAGGTAAATTACCTCACTTTGTTTTGGATACAAACA
TGAAGCAAAAATCACTTGGAATGTATCACAATGTCAAACAGATTCAACAA
CAATATCATGCACACGAAAAGAAAATTCAAAATTCTGCTCTCTTTTTCAC
ACCATTTCCTGAAATCACGGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032016XLOC_032016Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050559-exon-scaffold_179-1575043694:468108..468135TCONS_00050559-exon-scaffold_179-1575043694:468108..468135Clytia hemisphaericaexon
TCONS_00050559-exon-scaffold_179-1575043694:454040..454321TCONS_00050559-exon-scaffold_179-1575043694:454040..454321Clytia hemisphaericaexon
TCONS_00050559-exon-scaffold_179-1575043694:451790..452077TCONS_00050559-exon-scaffold_179-1575043694:451790..452077Clytia hemisphaericaexon
TCONS_00050559-exon-scaffold_179-1575043694:451261..451620TCONS_00050559-exon-scaffold_179-1575043694:451261..451620Clytia hemisphaericaexon
TCONS_00050559-exon-scaffold_179-1575043694:450863..451045TCONS_00050559-exon-scaffold_179-1575043694:450863..451045Clytia hemisphaericaexon
TCONS_00050559-exon-scaffold_179-1510915933:468108..468135TCONS_00050559-exon-scaffold_179-1510915933:468108..468135Clytia hemisphaericaexon
TCONS_00050559-exon-scaffold_179-1510915933:454040..454321TCONS_00050559-exon-scaffold_179-1510915933:454040..454321Clytia hemisphaericaexon
TCONS_00050559-exon-scaffold_179-1510915933:451790..452077TCONS_00050559-exon-scaffold_179-1510915933:451790..452077Clytia hemisphaericaexon
TCONS_00050559-exon-scaffold_179-1510915933:451261..451620TCONS_00050559-exon-scaffold_179-1510915933:451261..451620Clytia hemisphaericaexon
TCONS_00050559-exon-scaffold_179-1510915933:450863..451045TCONS_00050559-exon-scaffold_179-1510915933:450863..451045Clytia hemisphaericaexon
TCONS_00050559-exon-scaffold_179-1491911889:468108..468135TCONS_00050559-exon-scaffold_179-1491911889:468108..468135Clytia hemisphaericaexon
TCONS_00050559-exon-scaffold_179-1491911889:454040..454321TCONS_00050559-exon-scaffold_179-1491911889:454040..454321Clytia hemisphaericaexon
TCONS_00050559-exon-scaffold_179-1491911889:451790..452077TCONS_00050559-exon-scaffold_179-1491911889:451790..452077Clytia hemisphaericaexon
TCONS_00050559-exon-scaffold_179-1491911889:451261..451620TCONS_00050559-exon-scaffold_179-1491911889:451261..451620Clytia hemisphaericaexon
TCONS_00050559-exon-scaffold_179-1491911889:450863..451045TCONS_00050559-exon-scaffold_179-1491911889:450863..451045Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_179supercontigscaffold_179:450863..468135 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.186529	0.229965	0	0.557701	5.81132	4.83715	2.74502	1.89501	4.08884	3.30142	6.79383	7.02994	6.27366	4.75939	4.09919	5.79699	3.05522	3.77345	4.51374	3.69264	1.53022	0.827264	0	2.72787	8.04572	5.67634	1.04802	0.74103	0.918343	2.3114
Blast
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BLAST of TCONS_00050559 vs. Swiss-Prot (Human)
Match: PIGN (GPI ethanolamine phosphate transferase 1 OS=Homo sapiens GN=PIGN PE=1 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 2.222e-110
Identity = 179/383 (46.74%), Postives = 246/383 (64.23%), Query Frame = 1 
Query:   10 FPTYFRVFYIYFKSPILPGLHSIDVETNSLANRLVLFVADGLRADKLFHRSNAKHSQ--FLREIIQTYGRWGVSHTRVPTESRVGHVSMMAGTYEDVSAITNGWQDNPVDFDSFFNQSTNTWCWGNPDILNIFTKTNTKNY-HPSSYDAKEIDFASKDPSLLDTWVFDKVENFLNKSNQNLEMRNELLKTKTVFFLHLVGIDTNGHAKKPDSKEYLDNIGVVDKGIAKAYRQFEEFFNHDGRTAYILTSDHGMSPWGAHGSGLQSETETPFVAWGSGIKKPTKHRHVNKDTQSMV-WELEDWERTDIQQIDLADLMSFLIGTSFPVNSVGKLPHFVLDTNMKQKSLGMYHNVKQIQQQYHAH--EKKIQNSALFFTPFPEITE 1140
            F  +  +F IYF SP++ G+          A RLVLFVADGLRAD L+      +S+  F+R II   G WG+SHTRVPTESR GHV+++AG YEDVSA+  GW++NPV+FDS FN+S  TW WG+PDIL +F K  + ++ +  SYDAK  DF ++D + LDTWVFD V++F + +  N  + +++ + K VFFLHL+GIDTNGHA +P S++Y  NI  VD G+ +    F  F+ +DG+T +I TSDHGM+ WG+HG+G  SET TP V WG+GIK P +      D   +  W LE+W+R D+ Q D+A LM+ LIG  FP+NSVG LP   L+     K+  M+ N  QI +Q+     +KK       FTPF  +++
Sbjct:   13 FVFFASIFDIYFTSPLVHGMTPQFTPLPPPARRLVLFVADGLRADALYELDENGNSRAPFIRNIIMHEGSWGISHTRVPTESRPGHVALIAGFYEDVSAVAKGWKENPVEFDSLFNESKYTWSWGSPDILPMFAKGASGDHVYTYSYDAKREDFGAQDATKLDTWVFDNVKDFFHHARNNQSLFSKINEEKIVFFLHLLGIDTNGHAHRPSSRDYKHNIKKVDDGVKEIVSMFNHFYGNDGKTTFIFTSDHGMTDWGSHGAGHPSETLTPLVTWGAGIKYPQRVSAQQFDDAFLKEWRLENWKRLDVNQADIAPLMTSLIGVPFPLNSVGILPVDYLNNTDLFKAESMFTNAVQILEQFKVKMTQKKEVTLPFLFTPFKLLSD 395
The following BLAST results are available for this feature:
BLAST of TCONS_00050559 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PIGN2.222e-11046.74GPI ethanolamine phosphate transferase 1 OS=Homo s... [more]
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