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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050630 ID=TCONS_00050630|Name=TCONS_00050630|organism=Clytia hemisphaerica|type=transcript|length=886bp
TCTGCAAAAGATTGAGCTATAAAGATATGCctctttttgtacaaaaaaat
tggaatgaaaaaattggtcaaaaccactattttcataattttgagatgaa
gaacatttttcaggatttaaataAAGTTCGGGCGAGTATTGAGTTGTCAA
TAGCTCttcaataatattttgaatttagaGAGATTAGTACATGACGAATG
ATTAGAATCTATTCCAGGTGTTTGATTAATCGAAACATAAAACTCTTCAA
AACACCTTATATTGACTATATAGAAAATGCTGAAACTCGATGTTGATCAA
ATTTAATGGGCGTAAATTTCCCGGTGACTCCTTTTCCGAAGAAGAAATAT
TTCCCAAGGGATAAGTTCTTATCACCAATTGCTATAATCCTTACGAATTT
TCAAAGTATAATTTTCAACTCTGAGTCGTCTTgttgtctttttctttgat
tttctcaaaaacgcgtttccgggggtttgcaaacACCTTGTCAGGAAAAT
CTCAGGATCAGAAAGTAATatagacttgaaattttcagggaagttGCCTG
GCATGATTGTGCATGGAATGAGTGGattaaaaagtttcaaagttggtttc
ctgatttttgatttcaaaaaatcgtttttttcagtttcttaccccctgga
aaatttttttttttactcattCCGTAATTTTTCCATATAATactgaactt
taaaaaaaaaagtaactTTGTAGGTAACTCAGTGTTTCAGAAAACCTGAC
ACAAGCAAAATATagtattttaccccctggctgattttacccccgtcttt
agttatttttagaatgtttttctatttttagaaaccttaataaTTGATTa
tcatttcctgaaaatttcatcaaaaatattaaGCAG Run BLAST on NCBI transcript from alignment at scaffold_18:43361..44246 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050630 ID=TCONS_00050630|Name=TCONS_00050630|organism=Clytia hemisphaerica|type=transcript|length=886bp|location=Sequence derived from alignment at scaffold_18:43361..44246 (Clytia hemisphaerica)
CTGCttaatatttttgatgaaattttcaggaaatgatAATCAAttattaa
ggtttctaaaaatagaaaaacattctaaaaataactaaagacgggggtaa
aatcagccagggggtaaaatactATATTTTGCTTGTGTCAGGTTTTCTGA
AACACTGAGTTACCTACAAagttacttttttttttaaagttcagtATTAT
ATGGAAAAATTACGGaatgagtaaaaaaaaaaattttccagggggtaaga
aactgaaaaaaacgattttttgaaatcaaaaatcaggaaaccaactttga
aactttttaatCCACTCATTCCATGCACAATCATGCCAGGCaacttccct
gaaaatttcaagtctatATTACTTTCTGATCCTGAGATTTTCCTGACAAG
GTgtttgcaaacccccggaaacgcgtttttgagaaaatcaaagaaaaaga
caacAAGACGACTCAGAGTTGAAAATTATACTTTGAAAATTCGTAAGGAT
TATAGCAATTGGTGATAAGAACTTATCCCTTGGGAAATATTTCTTCTTCG
GAAAAGGAGTCACCGGGAAATTTACGCCCATTAAATTTGATCAACATCGA
GTTTCAGCATTTTCTATATAGTCAATATAAGGTGTTTTGAAGAGTTTTAT
GTTTCGATTAATCAAACACCTGGAATAGATTCTAATCATTCGTCATGTAC
TAATCTCtctaaattcaaaatattattgaaGAGCTATTGACAACTCAATA
CTCGCCCGAACTTtatttaaatcctgaaaaatgttcttcatctcaaaatt
atgaaaatagtggttttgaccaattttttcattccaatttttttgtacaa
aaagagGCATATCTTTATAGCTCAATCTTTTGCAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050630-exon-scaffold_18-1491911889:43361..44246 | TCONS_00050630-exon-scaffold_18-1491911889:43361..44246 | Clytia hemisphaerica | exon |
| TCONS_00050630-exon-scaffold_18-1510915933:43361..44246 | TCONS_00050630-exon-scaffold_18-1510915933:43361..44246 | Clytia hemisphaerica | exon |
| TCONS_00050630-exon-scaffold_18-1575043694:43361..44246 | TCONS_00050630-exon-scaffold_18-1575043694:43361..44246 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_18 | supercontig | scaffold_18:43361..44246 . |
Blast
The following BLAST results are available for this feature:
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