TCONS_00050642 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050642
Unique NameTCONS_00050642
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1497

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050642 ID=TCONS_00050642|Name=TCONS_00050642|organism=Clytia hemisphaerica|type=transcript|length=1497bp
ACCAGTTCAGCGTGTACgcctaaaacaaaagaaattgttCATTATCAGTC
TTCAATCATATGTCTATCCTGCATAAAAgctcaaatattttgaaagatat
ttcatgaCGTCAATGAGTTACATAGAGAAACTTCGGTCACAATGCACGAC
GAATGGAAACTAGGTTTCTCCCAGTCAGCGGTATTTACATGTCAGCGGCA
ATACAACTGTTTGTCAACGGTCAGCGgtttgaatttttcaataagCTGAA
ATAGAAAAACACACATGGAAAATGCAGATGTGTTGAAACAAGATGAAAGT
GGGAGTGTAAAGATTAGGGGAGAAATAAAGAACATTAGTTGagagttttt
ttaatttgaactgTATTATTTACCTTGAAGGCACGGTTTTTGTGAAAAAC
CAAGTGTAATGGATCCAACGGAGAAAAAGAAGCTCTACGTAGAGGGGAAT
TCCTTCGACTGGACCAAAGTTCCAGCTGTTTTACGAAAGGAATTGGAGTC
ACTTGCTCAGTCAATGAATCAAGATGCAATGACTATCCTTCTTTCACTGT
TAACTGTTTTTTCTGCATGTATCGGACACACACAGGTTGTCATTTCAAAT
AAGTGGAAGGAAAATACTCTAATTTGGGCAATGATATGTGCTGAATCAgG
ACGTGGGAAATCAGTCGTATACGCATTTGCAAAATCAATCattgaaaaag
ttaaaacaaatgTACATTACAACGAAGAGCGTAAAGGAAGAGACATTACT
GTACCCAATACTACCTGGGACAAGCTTGGGGACATCATGGCAAATAACGG
TGCTCGAATTTATGGGATGTTTGACGAAGTGATGGGGTTTTTCTCTCAAC
ATGGGATTTACACCAACAGGACAAAAATAACAGAGTGCAAAGAGCTCAGA
GACTTATTACGGTTATACAATTGTGATGATCTGAGGAGGGAAACAGTTAC
TGGTAATGCAAATTATAAAATGACTTTATCACAATTTACAATCCTTGGTT
TAACCCAGCCTGACTCAGCCATTGCCTTGATGAAAgatgaaaatggtcaa
agaaGTGGCTTCCCTTTTCGATTCATTTGGTATTTTCCGGAGCCAAAGTT
CAGCTCATTGGCAGATTTGCTTTCACCAGATCCGATTGACCAAGAAGTAT
TTGAAAGTGCTCTCGTGAAATACCTGACTTTAAAATATGAACGATCGGAT
GAGAATTGTATATATACAACGGAGGACAAGGTGTTATCGGTCAGACCTAC
GTTAGAGCAATATACTCTTTCCCCTACTGCATTGGAGATGTTCAGGGAAT
TTCATGATCATGTAGAGCTTGGTATTCTGAAGAAGTACCTGTTCAATTTG
ATAATCTCAGGTAAGCTACACTTTCTTTTAAACCAACCCCAATTTTCAGG
GCAGGGCTAGAGTTGCTAAggattttcaggatttcaaCCTAAAATTGATT
ACTATGTATATTTCCTCCAATAAGGGCCAGGGGGTACAAAGTTGGGG
Run BLAST on NCBI

transcript from alignment at scaffold_180:8863..26854+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050642 ID=TCONS_00050642|Name=TCONS_00050642|organism=Clytia hemisphaerica|type=transcript|length=17992bp|location=Sequence derived from alignment at scaffold_180:8863..26854+ (Clytia hemisphaerica)
ACCAGTTCAGCGTGTACgcctaaaacaaaagaaattgttCATTATCAGTC
TTCAATCATATGTCTATCCTGCATAAAAgctcaaatattttgaaagatat
ttcatgaCGTCAATGAGTTACATAGAGAAACTTCGGTCACAATGCACGAC
GAATGGAAACTAGGTTTCTCCCAGTCAGCGGTATTTACATGTCAGCGGCA
ATACAACTGTTTGTCAACGGTCAGCGgtttgaatttttcaataagCTGAA
ATAGAAAAACACACATGGAAAATGCAGATGTGTTGAAACAAGATGAAAGT
GGGAGTGTAAAGATTAGGGGAGAAATAAAGAACATTAGTTGagagttttt
ttaatttgaactgTATTATTTACCTTGAAGGCACGGTTTTTGTGAAAAAC
CAAGTGTAATGGATCCAACGGAGAAAAAGAAGCTCTACGTAGAGGGGAAT
TCCTTCGACTGGACCAAAGTTCCAGCTGTTTTACGAAAGGTAAGTACCAC
ATACTAaaggaaataataaaaaaaagttagctgAGTAAGCTAAATGGGCG
ATAGGTCAAACCGCAATGGCCAattcatagtgtgcacccccccaCTCTGC
AGGGGGGGTTTGGATTTTTGGGTCCAAAACAGCCAGGTGGGAGTCTGAAA
TTTTGGACTTTCGGGTGGGGGAAATAGGTTGAGGTGGGACTAGAAATCTT
TAGGTGGGACTCTAATGGAAAAACTTAAATTCATATCacagtttgttgtt
gttgttgaattgAATTGCTTTACATTTCCTATCCGTGAATAAGTAAAAAT
TGAAGGGGAGGTCAGCTCATCGAAATTtggtaattaaaaaaattttatta
aataaaatcccactttctagtccgacagtaaaaatgtccgacgttggatt
tgacgaaagtgtcagtattccgacaacaattttgtccgacaacgagtaaa
AANGTTTTAGGTGGGACCTtggggaggtcgtcagtagtccgacactttct
agtccgacagtaaaaatgtccgacgttggatttgacgaaagtgtcagtat
tccgacaacaattttgtcccaattgtccgacaacgagtaaaaaaaaaaca
tataaaaatcgaaatatgaatcgTGGAAGAGGAAACACATCttttccgat
tttgaggttaggcccctaaacccgacttttcttaaattttggaaagcttg
ttACGATTAGGCTATCAAGAGTCAATCAAGAgattggatttagctgtttt
tacgaccctattctttagtgatttacaaccctgattggtcctttatttct
acTTATGTCAAAATGTCgccaaaataaacttttattaatattatctcaga
gaaaaacccttattcaacattcgacactctaaaatcttgcgttttcggac
aaaagtgacgtcggaaaaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNGTATGGATCttactgagaaaatttt
aaccgcatcggctcgtgcttcttaactttaaacagctctagtaacattga
gcactttttatgaagactcatttcgccaatttatagtctgattatgatCC
CCTTACTCTCTTCAtggctaagttcctctgggctaatatctgctatcggc
ggggcattcatagcgacagctacttgctagtatttAATACTTATTTAATT
TACAGGAATTGGAGTCACTTGCTCAGTCAATGAATCAAGATGCAATGACT
ATCCTTCTTTCACTGTTAACTGTTTTTTCTGCATGTATCGGACACACACA
GGTTGTCATTTCAAATAANcaaagtgtcggactagtgacatgcacccggA
CCTTGACCCCCCTGCACACTATGCAATTTGAAATCAGCTCATTTTCGTTT
TTCAGTAAATTACCTTTTTGTATACATTTTCGCgagtacttaatttcgcg
agttttaggTTAAATTTCCCGAAATTAACCATGGATGTTGAAAGCTACTT
TTTATGGTTTTCTACGTAGTCGTAGCCATTATATACAATAAGGAGGGTTG
CCAAACTTATAACTTATACTTGAAGTCATGTACTTTTattattgaaagaa
aaactttttatttttaacttgTACTCCTTGGAAAATTGAGTCAGAATGAT
TCAAGTTATTATAAAAGCTTTATGATGATTTGCAACTGAGTGTCTTTTGG
CTGAAAAGTACTTTTGTTAATATTTAATACTTATTTAATTTACAGGAATT
GGAGTCACTTGCTCAGTCAATGAATCAAGATGCAATGACTATCCTTCTTT
CACTGTTAACTGTTTTTTCTGCATGTATCGGACACACACAGGTTGTCATT
TCAAATAAGTGGAAGGAAAATACTCTAATTTGGGCAATGATATGTGCTGA
ATCAggtattttatttaatttattgaAATAGTCTAAAGACACGAGGCAAG
ATAACCTTTTAGGGTCATATGTGGTGACCTCTTTTTTGGGTGTGGATATC
ACTTCATAGTCTCCTCCCCCTTTTAAAAGGGTGGGGAATTTTTTATTCAG
AAAATGGGAAATGGTTGgcgaaatcattttcaaaattctaggGGGGACAA
TTGAAAGGGGGAGAAAAAATAGCTCCAAGACCAAAAAGTCAAGGGTGGGG
AGAAAAAATAACCTTTAGGATCTGCGGTTGATCAAGTCTGATCCATCAAA
AATAAACTGGTATAAAAAGTCATTACGTTGACGGTGAATCTTCTTGAATT
TTTGGCTAAAAGTTTTGGCGTACTGTATAACCCGGACCCGGACCGGACGC
TGGACCCCTTGAAAACCCGGACCCCGGACTTTTACGAAAACCCGGACCCC
TCGTAATTTTTCGAGAAAACCCGGACCCCtcataattttttgagaaaatc
cagtgaaatgtgagtaatgtatcgtgattcaagtcgactgatataattat
atacataatatatgttacaagttcccaacggattctcaagctcgNNNNNN
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NNNNNNNNNNNNNNNNTTGTTAATATTTAATACTTATTTAATTTACAGGA
ATTGGAGTCACTTGCTCAGTCAATGAATCAAGATGCAATGACTATCCTTC
TTTCACTGTTAACTGTTTTTTCTGCATGTATCGGACACACACAGGTTGTC
ATTTCAAATAAGTGGAAGGAAAATACACTAATTTGGGCAATGATATGTGC
TGAATCAggtattttatttaatttattgaAATAGTCTAAAGACACGAGGC
AAGATAACCTTTTAGGGTCATATGTGGTGACCTCTTTTTTGGGTGTGGAT
ATCACTTCATAGTCTCCTCCCCCTTTTAAAAGGGTGGGGAATTTTTTATT
CAGAAAATGGGAAATGGTTGgcgaaatcattttcaaaattctaggGGGGA
CAATTGAAAGGGGGAGAAAAAATAGCTCCAAGACCAAAAAGTCAAGGGTG
GGGAGAAAAAATAACCTTTAGGATCTGCGGTTGATCAAGTCTGATCCATC
AAAAATAAACTGGTATAAAAAGTCATTACGTTGACGGTGAATCTTCTTGA
ATTTTTGGCTAAAAGTTTTGGCGTACTGTATAACCCGGACCCGGACCGGA
CGCTGGACCCCTTGAAAACCCGGACCCCGGACTTTTACGAAAACCCGGAC
CCCTCGTAATTTTTCGAGAAAACCCGGACCCCtcataattttttgagaaa
atccagtgaaatgtgagtaatgtatcgtgattcaagtcgactgatataat
tatatacataatatatgttacaagttcccaacggattctcaagctcgctt
ataataaaactattagatgttagtagcagacccgactgacaattgttatg
tagcaggttgaaacatgagtttctgctggaaagatgtagtttgttttcaa
gttaaatctttaaaataaaacaaactgtgtaggtttctttacttccaaac
aacctaccaatagttttggaacactccataataaaggaagatggctgttc
ttgtggattgactttctggtatatcccatataaacacgatgtgacatgaa
agtgaagagacatgattttgttggtttttgtttgatttgttgactcatat
ctcatggcaaatgggatagcaaatgacttttcatgtattgcttggctcta
catatgatacctctaactttgaacacctccagaatgttgaaaaaagcact
ttacgtttacgagataagtttcgattataattttcttggaaatttttaat
cgacagatttgacttggcgtcagttttgtttggttgataaatctttagct
acaCCATGACCAtgggatgattttcaataaatttttgttgttatacaata
actttttatttctgGCTTGGTTATAACAGAACAGTATTTGATCTTATGTA
CGTTCACGTGAAATGAATCTTGGCTCTTGACTTGGGGTAAACACAAGTTT
GTGTATGACAGAAAAATTCCATTTTTGCAACTAGAAGTTATGGAAATTAG
CTGATGCAAAACATTTTAAGCAACAAGTATCATGATCATttaaaaagcaa
tgaaatgccacacagtcactctacacatggtACTTTATGCCTCCAGGCTG
CTCCAGCCatccatgattggtatcagaatgttggaagaaaaaaaatttaa
ctagAAATTGtttatagaaattatattgacttatttttacaattttggcg
gtgtgggttttgttggttgataatgttcacaccgtgggatggttttcaaa
aaactattATATTGAtagttgtttgttggaattgattataccaaaaaaag
ggaatctttttttgataaatgctCAGGGGGGAGGGGTACAGAggcaactg
ctccaacttgagtgacgtcaaacgctcacaTTCGCGCGTGTTCCACTACG
ACACAGTGCCCTGTGTCTGTACACCCCCCTGAAatgctttattttttcat
gaatcaaaaaaaccgtgtggatggttgacatctttctctagtcttgTATA
ACCAATGTctattttcaaatcttgaaagctctaccgtgaaaaagggtaac
ttgcatcagtggaggctaacatgcatatccctcaaatgaaagacccggct
ggtcattaaaatacgaaaataaatcaaaacaaaNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNAGAGCTGCCAGCGGAGCTGCGtatg
tgtattttaatgaccagccaggtcattcatttgagggctatgcatgttag
cctccactgatgcaagttacctttTCTCACGGTATatctactgaattgaa
gctctgactagctgtttttaaaacttttagccattttttttctttatata
ttgctattaaagatagatttttactttgtcgtaatgtgaatttatggtaa
agttttagtttttgagtttagtttatCTACagcagtattttttcagtaat
cctttcttgtaaatatagtaacatttaaccacNTGTCGTAATGtgaattt
atggtaaagttttagtttttgagtttagtttatCTACagcagtatttttt
cagtaatcctttcttgtaaatatagtaacatttagcCACCGGACTCATTG
CCCTcgttatattcaatttttaatacatttaatatttttttaggactgat
aagtacatctTTTTGAACACCAAagcaaagcaaacaacatgccaattctt
tctggacaaatatatctctatactttattgtgtgctttgatttctatttt
aatcaacccttcaaactgctgatctttcaactatcatttaggagtataga
atgggcttccatagtgcCATTTTCTGcaaagtattttgtgcaaattttca
acaaagcagacttcttgactgtccttgtccctcgtgttaaaattgttcta
atggaggacattgccatttttggtagccttcacatatcaataaggagctt
tggcttaaatgttttttctgacgAAATTATACTAATCTggaactattagg
cctttatgaactttctagaacattaatcttgctccaatattgagaaacac
tggaaaatagATAAACGCCAATTATAATATTTCCTGGCCAACCCCggaat
tttgattggttttctCGTAAATTTGAGTAGGGTCCGGATTTTCTCGTAAA
TTTGGATGGGGTCCGGGTTTTCTCGTAAATTTGGATTGGGTCCGGGTTTT
CGTAAAAGTCCGGGGTCCGGGTTTTCTTGGGGTCCAGGGTCCGGTCTGGG
TCCGGGTTATACAGTACGCCAAAAGTTTTCAAGATGATACTCATCTGGTT
TGACAAAGGagaagtttttaattattcagcctttgtctcatgttaaaaaa
tcaacaaatttcTAAGGCAAAATCGCACATTTCTCGCATTTTCAACTTTA
TGCTTTATTCAATATCTTTAGGtctgaaaaagctaatcaaggATCGTATT
AAACACTAACTATACCCTACATCATGTGACAACTGTTGATTGACCAACGA
AGCATAACAATTTAAAAACCTGAAGACAGTACAAATGACAAAACAAATTC
AGTtacacagaaaaaaaaattgaaaaattttggttgctagACAACAGAGG
GTGAAAAAAAACGTGTGCATtcagaaaatataaagttttataGGTCTTTC
CAGTGGTCTCAtacttttaaaaagttcttcCTCATTGTGTACACTTAGGT
GTTTAGATATCCTAAAAACATGAAATAGTTTTCAGATCAAACGCATCAAA
GAggttaaaaacattaaaaacattCCCATTACAAATTTACTTATTAAATA
TTTAGGACGTGGGAAATCAGTCGTATACGCATTTGCAAAATCAATCattg
aaaaagttaaaacaaatgTACATTACAACGAAGAGCGTAAAGGAAGAGAC
ATTACTGTACCCAATACTACCTGGGTAGGAATTACTAATTAATATGTTTA
AACTTTTTAGCTTGATAATGTGATGAGCTTGTAGTTGTAGCTGTTTGTAG
CATTAGTTGAAATCTTATAATGTTGGTATTTTAGTCATTATTGTTAAGTA
ACAACAAACAAGTACTGTAAGtatcaaagaaaaatacaattcaaattaAA
ATCATACTTTCAGGACAAGCTTGGGGACATCATGGCAAATAACGGTGCTC
GAATTTATGGGATGTTTGACGAAGTGATGGGGTTTTTCTCTCAACATGGG
ATTTACACCAACAGGACAAAAATAACAGAGTGCAAAGAGCTCAGAGACTT
ATTACGGTTATACAATTGTGATGATCTGAGGAGGGAAACAGGTactttat
tttattcatttttaggATAAATAAGAGCCACAGAAATAAAGTAATACTGT
ACTGCTTTTAGAGTAAGTGTAGGCTATGTATTTCATTTGTTCAGAATATA
AAAGAATATCCCTTTGCTCTTATTTTGATTAATTAGAAtttccattttat
ttgaaaacatttgCAATAGGGCTTAAAACATAATCAGAAGATAGCTTTCT
CCATGAATTATTTTCTCAACCACAATTGCCTCAACTAAAGCAAGTGAAAT
AAATATTGGATGCTTTGAAATGTATATTTTTGATTGGTTCCATATAGGGA
ATTATAGTGAGGTTgctttacataaattattgcaACTATACTTCAAAATT
ATGTCAGGCTGACGTTTGGCACAAATGACACTTTAGGCCATGGCAAATGA
CCCTCTCCTTTTTTCAATATGTTGGTGAAAAAGCAATATTTGATTTTGGC
GATTGATTTTGtagtccaaaatgaaaaaaattggggAATTTCTCTCACAG
TCTACACAATTTTTAGACTTTGGTGTAATAGATTTTTTTGCTCAACTCAA
AAAGCTCTATCACATAGTATGGGGCCCAAGTAGTATAGTTCTTTAATTTT
AAAGACCCactaaaaatcacaaattttcagctatttttactcatttttca
tACTTTTATGGCCATAGATACCCACTTTGAACACCTCTGCTGTACTCAAA
CCTTGCCAGTAAaagtaattttgatgaaataaatGTTAATAGATGGATAA
CTTCAATAGTTACTTTGggtttttcttgaaataaaatccccctttttaaa
tcttttaagGGTTTTAGCTGTATATTATTGCTTCAATTTTTAGTTACTGG
TAATGCAAATTATAAAATGACTTTATCACAATTTACAATCCTTGGTTTAA
CCCAGCCTGACTCAGCCATTGCCTTGATGAAAgatgaaaatggtcaaaga
aGTGGCTTCCCTTTTCGGTAAGTGATAACTATTTTAAAATTCActatgtt
tatttttgtttataacttTGCAAAAGgtttgcaaaataaaataaaccagT
GTTCAGTGTTAACACGTGATTGGTAACATTCAAACTAAATTAGCAAAAAT
GGTAAATAAGTTACAGTGAAAAAAACAGATATTGCTATAAAGgctattta
tataaaaaaagatttatttggAtttactgaattgaaattgaattttacAT
AAAAGACTTTCTACTGCAGAATCATgagaaatcttcgaaaatcgAGATCT
CGGGGAAATAAAGAATCTTAAAATTCtacaactaaaataaaaataattgc
cTTTTGACCTAAAAATGCTGGCTTTGCATgaactcaaaataatttcttaa
ttttggcGGGCAATTTATTTGGCAGTTGGccaattttgattattttgatc
cACCAACCTGCttagttggtattttacagaccagacctTCCTATCCCTAA
AAAGGTGTgtgttttaatttaaaaatgtcTCTGTTAATGTCCTAATGTGA
CATGCGTAACTTTATTCAACAAAAATTGTGTatgacaaaattttgatatc
tacatctattcaagctgctctCTGCATTTTCTTATTACTCTCTTACTATT
TACCCTATTTTCATCTGAGTTTcattatcaggtaggtccatttcACAAgc
agcttgtttttttttattctgaaaTCGCTAAGTTACAAAATACACCAGAA
AGCTAAGCTTTATAGCATGAAAAAGAGTGTCGTCAACCCGCCTACAATCA
GAAACACCTCTTACAATCCAAAAGTAAACAAATACAAAATAAGCTGATAT
TCAAAAAAAcacattcttaaaaattgaaccaaGTTTAAtaaggaatttaa
ttttgcaattCTGGGTGTAATTCTTCCCTAAAAGTGTAAATCAGTAAAGT
AAGTTTTAATAAAGTAAGTAAGATTTAGAGGCAGTGAAAGTTACCCATAC
ATTATTAGTTACCCTCTTTCACGGTGCCATGTTTGAGGAAGATTGACTCA
ACAAATCCAAATAAATTAAGTACATTCTTGTAATCATTGACAATAAATGG
CCCCCAATAGATAGCTTAACCTAATACGTTCAGAATATAGTTTAAATCAA
AGGTCCTCAAGTGGGCataaagttattgaggtttgtGGAATTATTGACAC
GAAAAGAATTTGCTATCAAATCTACCAACCTTACGTTTATGATTGGGACT
GATTGGGCCACAGGAGAAATTTGTAAAGGATGATGAACCCCATctcattt
tatttatttgtgagattctgaaatttttaacataatGATTGCTCTCCTTC
ATAAAATTACTTAAAGGTTATGTATATTGGACATGGCTGACCCTGCTTTA
TCACTTTATTTCAATTATATTTTAGATTCATTTGGTATTTTCCGGAGCCA
AAGTTCAGCTCATTGGCAGATTTGCTTTCACCAGATCCGATTGACCAAGA
AGTATTTGAAAGTGCTCTCGGTAAATTTCAACATAATAACAAGGATTCTA
GGATAATTGctcccggaaaattgccccaaACAATCACCTTCAAAACCATA
ATTAATCGTTATGATACGCAATTATCAAGTCTAACAATAGAAATAATCAA
AAGACTTACCTCAACGATCAATAATTGTCTGGGAGGTAattgactgaaaa
aattttccgggggcATTTGTCCTGGTGGGTAATTGTCCTCGGGGGTAATT
GTCCAGGGGGTGATTGTCCTGGTGGCAATTGTCAGAAGCAGTCAACAAGG
CAAAAAGGTTGAAAAGCTGCTCCGTTTTCCCAGCCagcaaattttttcta
aaaaaatggtaTCAACAATCTTCTTCAAAACAGCTCATAACTTCCAGCTG
GAATCGTAAATTTTTATGGCCAATTTCTCAGAATGTCTCAAAACATTagt
tttttgtatatttctaCAAAATAGATGTTCTGGTTTTCAGGAGCAATCGT
AGAATTTCACTGGAACAGCCCTATTTTTACCTAATTTATACCTTCAAATT
CCCGGAACAGTTCAAAAATTTCAGACTGTCACAGGAATACCTATAAAAAT
TTCCCAGACTGTTACTAGACCAGCTCAAAAAATTTCCCAGACTGTCACTA
GAACAGCTCAAAAAATTTCCCAGACTGTCACCGGAACACCTAAAATATTT
CCCAGACTGTCACCAGAATACCTAAAAAATTCCAAGTTTTCATTATGGAC
CACTTCCGAATCTATATGCTAGGATCGTTGGGAACACCTCAAAATTTCCT
TACATGCCAAAACCAAATTCTATATTTATTGCAAGTTTTACCAGAACAGC
TCAAAATACTCAGCCATAAAAGCAAAGCACTATTAAAACTTTCCAAGACT
TCATTCAGGAACAGctttatatttttagaaaattcaatTTCGGAATTTTC
ACCGGAACACCCCACCTGCTTCCAAATGAGATAGGCCTTTGGAACagctt
tttgacaaaaatgctTTGGTGACTGCTTTCGAATTATCTGGGGGTAATTG
TCTGGGAGgcaatttccagggggtgattGTCCTGTCAAGATAACCAGATC
AGGTGACTAGTGTAAGGGATGAATTATAGGGGAAGGATACTACTTTCAAT
AGAAGCTGAAAAAATGTTTACAGCTTAGGACCAAAGTATGCCATTGACTT
TCTTATTTACCCCTCTACTTAACTATCTTCTTTGATCCTTTCTGATTACA
TCTAAGTTCCTTTATTTGCCGTTTATTTcttactttttctgtaaaaccAT
AGTGAGCAGAGCTGTCTTGGAAAGACTGAAAAggcaaaatagaccttttt
ttcatccaaatgaataaaaaataaaaaaatgaaataaaataatcatgaaa
aatttaaaaatgaacgGAATACTTTTTTGCAAATTGCCAAATTTTCTGAG
CCCCCCTGCCCCTTAGAATATGCACCCCTTCTTTTTTTTGCACATCTCTT
TTTTAATTCCCCTTTTTCAAGCCACTATAATGAAAACGCTTTACACCTCG
CTGGCTTTGAACTACCAAATACAAGCAACCATGTTTGAGAACCCAAGTCC
TACCAACTTATCCACAGCAAACTCCGTCACTCGAACTATTTATTTTAATT
TGCACACGCTATAAAGCAAGGAAGGAAGTCCCAATCCTATCCTAGGAGGA
ACGTCATGGACATTAGAGCTCCAACCCTGACTCTAACTTTTCATATGTTA
AACTGACTTAAGTCTTTTGAAATAAAGGCCTGAAAGTCTTTTAAGGTTAT
TTAAATTTTCATCTTGGTTTGAACGATGTCAACTCAATAACATCACTCAA
TCTTTTATAGTGAAATACCTGACTTTAAAATATGAACGATCGGATGAGAA
TTGTATATATACAACGGAGGACAAGGTGTTATCGGTCAGACCTACGTTAG
AGCAATATACTCTTTCCCCTACTGCATTGGAGATGTTCAGGGAATTTCAT
GATCATGTAGAGCTTGGTATTCTGAAGAAGTACCTGTTCAATTTGATAAT
CTCAGGTAAGCTACACTTTCTTTTAAACCAACCCCAATTTTCAGGGCAGG
GCTAGAGTTGCTAAggattttcaggatttcaaCCTAAAATTGATTACTAT
GTATATTTCCTCCAATAAGGGCCAGGGGGTACAAAGTTGGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032082XLOC_032082Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050642-exon-scaffold_180-1491911889:8863..9351TCONS_00050642-exon-scaffold_180-1491911889:8863..9351Clytia hemisphaericaexon
TCONS_00050642-exon-scaffold_180-1510915933:8863..9351TCONS_00050642-exon-scaffold_180-1510915933:8863..9351Clytia hemisphaericaexon
TCONS_00050642-exon-scaffold_180-1575043694:8863..9351TCONS_00050642-exon-scaffold_180-1575043694:8863..9351Clytia hemisphaericaexon
TCONS_00050642-exon-scaffold_180-1491911889:14658..14817TCONS_00050642-exon-scaffold_180-1491911889:14658..14817Clytia hemisphaericaexon
TCONS_00050642-exon-scaffold_180-1510915933:14658..14817TCONS_00050642-exon-scaffold_180-1510915933:14658..14817Clytia hemisphaericaexon
TCONS_00050642-exon-scaffold_180-1575043694:14658..14817TCONS_00050642-exon-scaffold_180-1575043694:14658..14817Clytia hemisphaericaexon
TCONS_00050642-exon-scaffold_180-1491911889:21718..21836TCONS_00050642-exon-scaffold_180-1491911889:21718..21836Clytia hemisphaericaexon
TCONS_00050642-exon-scaffold_180-1510915933:21718..21836TCONS_00050642-exon-scaffold_180-1510915933:21718..21836Clytia hemisphaericaexon
TCONS_00050642-exon-scaffold_180-1575043694:21718..21836TCONS_00050642-exon-scaffold_180-1575043694:21718..21836Clytia hemisphaericaexon
TCONS_00050642-exon-scaffold_180-1491911889:22026..22203TCONS_00050642-exon-scaffold_180-1491911889:22026..22203Clytia hemisphaericaexon
TCONS_00050642-exon-scaffold_180-1510915933:22026..22203TCONS_00050642-exon-scaffold_180-1510915933:22026..22203Clytia hemisphaericaexon
TCONS_00050642-exon-scaffold_180-1575043694:22026..22203TCONS_00050642-exon-scaffold_180-1575043694:22026..22203Clytia hemisphaericaexon
TCONS_00050642-exon-scaffold_180-1491911889:23056..23179TCONS_00050642-exon-scaffold_180-1491911889:23056..23179Clytia hemisphaericaexon
TCONS_00050642-exon-scaffold_180-1510915933:23056..23179TCONS_00050642-exon-scaffold_180-1510915933:23056..23179Clytia hemisphaericaexon
TCONS_00050642-exon-scaffold_180-1575043694:23056..23179TCONS_00050642-exon-scaffold_180-1575043694:23056..23179Clytia hemisphaericaexon
TCONS_00050642-exon-scaffold_180-1491911889:24588..24682TCONS_00050642-exon-scaffold_180-1491911889:24588..24682Clytia hemisphaericaexon
TCONS_00050642-exon-scaffold_180-1510915933:24588..24682TCONS_00050642-exon-scaffold_180-1510915933:24588..24682Clytia hemisphaericaexon
TCONS_00050642-exon-scaffold_180-1575043694:24588..24682TCONS_00050642-exon-scaffold_180-1575043694:24588..24682Clytia hemisphaericaexon
TCONS_00050642-exon-scaffold_180-1491911889:26523..26854TCONS_00050642-exon-scaffold_180-1491911889:26523..26854Clytia hemisphaericaexon
TCONS_00050642-exon-scaffold_180-1510915933:26523..26854TCONS_00050642-exon-scaffold_180-1510915933:26523..26854Clytia hemisphaericaexon
TCONS_00050642-exon-scaffold_180-1575043694:26523..26854TCONS_00050642-exon-scaffold_180-1575043694:26523..26854Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_180supercontigscaffold_180:8863..26854 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.0101708	0	0.322884	0	0	0	0	0	0	0	0	0	0	0	0	0	0.949847	0	0	0	0.2967	0	0	0	0.17467	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050642 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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