TCONS_00050650 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050650
Unique NameTCONS_00050650
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length128

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050650 ID=TCONS_00050650|Name=TCONS_00050650|organism=Clytia hemisphaerica|type=transcript|length=128bp
AAAAAATTTTACAGTGAGATTTTGTATATTAACAGCaacatataaaaaca
aaaaaccaacAAATTGAAGCACTCTTATAATCCCTGTGGGTCAAACCGTC
TCCATGTCCACTTTTACGCAAACCGACC
Run BLAST on NCBI

transcript from alignment at scaffold_180:84799..84926

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050650 ID=TCONS_00050650|Name=TCONS_00050650|organism=Clytia hemisphaerica|type=transcript|length=128bp|location=Sequence derived from alignment at scaffold_180:84799..84926 (Clytia hemisphaerica)
GGTCGGTTTGCGTAAAAGTGGACATGGAGACGGTTTGACCCACAGGGATT
ATAAGAGTGCTTCAATTTgttggttttttgtttttatatgttGCTGTTAA
TATACAAAATCTCACTGTAAAATTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032089XLOC_032089Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050650-exon-scaffold_180-1491911889:84799..84926TCONS_00050650-exon-scaffold_180-1491911889:84799..84926Clytia hemisphaericaexon
TCONS_00050650-exon-scaffold_180-1510915933:84799..84926TCONS_00050650-exon-scaffold_180-1510915933:84799..84926Clytia hemisphaericaexon
TCONS_00050650-exon-scaffold_180-1575043694:84799..84926TCONS_00050650-exon-scaffold_180-1575043694:84799..84926Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_180supercontigscaffold_180:84799..84926 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050650 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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