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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050651 ID=TCONS_00050651|Name=TCONS_00050651|organism=Clytia hemisphaerica|type=transcript|length=1094bp
TTCtactttaaaaaacaaacataagaTTTATCATAATTTGTTTATGTTAG
CAATCTAGCCTCAAATGAATATGTTACTATTGCTGATAATCATAAGTTCT
TTGTTGTTACGTACGggacaaactttcaaaatactACATACACTCTCTCA
CATCTCTAGGCTCTATATCATGAAAAAGGGtcagctaaaatttcaaacca
ataaCTTATAAGTTTAGAGAAACAGCTAGAGAAAAAACTTAAAGGGTTTC
AGTGAAATCTCAGGTTACGTTTAGTGGGTCACACTATAGATATAGATTGG
ACTCTGTATTGCAACCTTTTGAATTGTATTACTCCCTCACAGCTATCAAT
GACCCTTTCAATCACTCAACTGACTGAAAAAAGTTGTCTTGAAGGTACAT
AGGTGATTGATAACAGCCATCATATGTTCAATAAAATTGGAAGTAAACAC
TAAAATATAGTTTAAGAAACAGCTGTGTATTTAATAGAAATTTGTTGTTA
CGTACAGGACAAAGTTGGGTACGGGACAAATTTTATTTCTAAgcagtttt
ttggaaaaacgaTGTAGACCCAGAGAATTTAGCAATCATTTTTAGAGAGG
GATCTGGAAAACttacaaaaaactgaaaaaaaaacaaattttaaaccaaA
CTTTCCGCGAGATATGCCCAATTTTATAGGTGTTACGTACGGGACATTCA
CGTAGAACCATCTCCAATTAGGCTCAAATcagttaaaatatctttttttc
tatGGTTTTtacagcaaatttcaaattttagttaTGATCCTCAGATATCA
ATTAAGAAATCTATGTAAATTATTTGTCATAATGGTTTCACAAAAGATTA
TACCAGTTCATTCAACCAAACTGTTACGTACGGGACATAAAAGCTCAACC
GTGAAGTAAAATCTCTACCCATTTCTCCCACTAGcacttataaataaaaa
caaggcaAAAAATTTTACTTCAACCTATCCTTCATTGGATGATCCAACGA
AAGATGCCACACAACACAAGGATTATGTTACaattaaagctttaaaatta
gaattttctcaaaaccGTCCCGTACGTAACGCAAAATGTCCCGT Run BLAST on NCBI transcript from alignment at scaffold_180:85101..86194 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050651 ID=TCONS_00050651|Name=TCONS_00050651|organism=Clytia hemisphaerica|type=transcript|length=1094bp|location=Sequence derived from alignment at scaffold_180:85101..86194 (Clytia hemisphaerica)
ACGGGACATTTTGCGTTACGTACGGGACggttttgagaaaattctaattt
taaagctttaattGTAACATAATCCTTGTGTTGTGTGGCATCTTTCGTTG
GATCATCCAATGAAGGATAGGTTGAAGTAAAATTTTTtgccttgttttta
tttataagtgCTAGTGGGAGAAATGGGTAGAGATTTTACTTCACGGTTGA
GCTTTTATGTCCCGTACGTAACAGTTTGGTTGAATGAACTGGTATAATCT
TTTGTGAAACCATTATGACAAATAATTTACATAGATTTCTTAATTGATAT
CTGAGGATCAtaactaaaatttgaaatttgctgtaAAAACCatagaaaaa
aagatattttaactgATTTGAGCCTAATTGGAGATGGTTCTACGTGAATG
TCCCGTACGTAACACCTATAAAATTGGGCATATCTCGCGGAAAGTttggt
ttaaaatttgtttttttttcagttttttgtaaGTTTTCCAGATCCCTCTC
TAAAAATGATTGCTAAATTCTCTGGGTCTACAtcgtttttccaaaaaact
gcTTAGAAATAAAATTTGTCCCGTACCCAACTTTGTCCTGTACGTAACAA
CAAATTTCTATTAAATACACAGCTGTTTCTTAAACTATATTTTAGTGTTT
ACTTCCAATTTTATTGAACATATGATGGCTGTTATCAATCACCTATGTAC
CTTCAAGACAACTTTTTTCAGTCAGTTGAGTGATTGAAAGGGTCATTGAT
AGCTGTGAGGGAGTAATACAATTCAAAAGGTTGCAATACAGAGTCCAATC
TATATCTATAGTGTGACCCACTAAACGTAACCTGAGATTTCACTGAAACC
CTTTAAGTTTTTTCTCTAGCTGTTTCTCTAAACTTATAAGttattggttt
gaaattttagctgaCCCTTTTTCATGATATAGAGCCTAGAGATGTGAGAG
AGTGTATGTagtattttgaaagtttgtccCGTACGTAACAACAAAGAACT
TATGATTATCAGCAATAGTAACATATTCATTTGAGGCTAGATTGCTAACA
TAAACAAATTATGATAAAtcttatgtttgttttttaaagtaGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050651-exon-scaffold_180-1491911889:85101..86194 | TCONS_00050651-exon-scaffold_180-1491911889:85101..86194 | Clytia hemisphaerica | exon |
| TCONS_00050651-exon-scaffold_180-1510915933:85101..86194 | TCONS_00050651-exon-scaffold_180-1510915933:85101..86194 | Clytia hemisphaerica | exon |
| TCONS_00050651-exon-scaffold_180-1575043694:85101..86194 | TCONS_00050651-exon-scaffold_180-1575043694:85101..86194 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_180 | supercontig | scaffold_180:85101..86194 . |
Blast
The following BLAST results are available for this feature:
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