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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050686 ID=TCONS_00050686|Name=TCONS_00050686|organism=Clytia hemisphaerica|type=transcript|length=995bp
GGTAAATGACGtatttcaatgattttcaaaagcTGTCTTTCTAGATCCGT
GTTAAAGTTATTCGGAAAAGAAAATATCTCCAGGAATACTTTTAACTTCA
ACAAATTCTTTAGAATGAGTAATACTAAATTAAATTCATATAATACTGTA
ATCCTACTTGtgaaattcataacactaaatccgacactgttttttaaaaa
tttgttcttaTCATATTATATTAAATAGATAATCTTTGGCGATTTCTAAA
TATATTGTTCCatataaatcaaataaaaattaagGCTAGTTAAGTCCTGA
TGAAAAAGGGTTATGTCTTTGGTTATCATAACAAAAgggcaacctcgttc
cctgcgtattatcagcttatTGACGCTTACTTATAGCGCTAGATTATACC
CTGCAAGTCTACACCAAGGTATTCTCTAGCGttaatcagtaacgtaaata
aagcctgggctacacggggacgaggttgagcaAAGGGAACTAATTATTGC
GAGAACTAATTTAATCAAGCAGCAAAAAGTCTTCATCAATCATTTTGACA
AAACCTTAATTTTGGATAGGCAGCAAAATTTTTGGCGGAAGCAAatcaaa
ttcgccaaatttagttcTCGACAAACCAATTATCCTTCAGGTACTCACTG
TGCAAGTCAGGTAACATGTTGATCCAGATTCGAAATCATTAGAAACTCTA
CGTCATATCATatcattatttatttttatactaTATTCTTATACTATTTT
TTACTATAATTCTCTCTTTtgatataatatattttttcaataatgttaCA
TAGGGTAAAAATTTGTcagaaattttgtcaaaatctgCTTGTACATATAT
TACGGTTTTAAATCAACTCCAGAATCGATTAAATCATAGGTTAACCAACA
TCTTATACAATCAGTAACCCAGCCATCAATTTATTTAAGTTTTAATTGTA
CATATTCTCTTTAAAAAGTCTCGAAAATTCGTTCGATTTGAAANN Run BLAST on NCBI transcript from alignment at scaffold_182:107276..108270 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050686 ID=TCONS_00050686|Name=TCONS_00050686|organism=Clytia hemisphaerica|type=transcript|length=995bp|location=Sequence derived from alignment at scaffold_182:107276..108270 (Clytia hemisphaerica)
NNTTTCAAATCGAACGAATTTTCGAGACTTTTTAAAGAGAATATGTACAA
TTAAAACTTAAATAAATTGATGGCTGGGTTACTGATTGTATAAGATGTTG
GTTAACCTATGATTTAATCGATTCTGGAGTTGATTTAAAACCGTAATATA
TGTACAAGcagattttgacaaaatttctgACAAATTTTTACCCTATGtaa
cattattgaaaaaatatattatatcaAAAGAGAGAATTATAGTAAAAAAT
AGTATAAGAATAtagtataaaaataaataatgatATGATATGACGTAGAG
TTTCTAATGATTTCGAATCTGGATCAACATGTTACCTGACTTGCACAGTG
AGTACCTGAAGGATAATTGGTTTGTCGAgaactaaatttggcgaatttga
tTTGCTTCCGCCAAAAATTTTGCTGCCTATCCAAAATTAAGGTTTTGTCA
AAATGATTGATGAAGACTTTTTGCTGCTTGATTAAATTAGTTCTCGCAAT
AATTAGTTCCCTTtgctcaacctcgtccccgtgtagcccaggctttattt
acgttactgattaaCGCTAGAGAATACCTTGGTGTAGACTTGCAGGGTAT
AATCTAGCGCTATAAGTAAGCGTCAataagctgataatacgcagggaacg
aggttgcccTTTTGTTATGATAACCAAAGACATAACCCTTTTTCATCAGG
ACTTAACTAGCcttaatttttatttgatttatatGGAACAATATATTTAG
AAATCGCCAAAGATTATCTATTTAATATAATATGAtaagaacaaattttt
aaaaaacagtgtcggatttagtgttatgaatttcaCAAGTAGGATTACAG
TATTATATGAATTTAATTTAGTATTACTCATTCTAAAGAATTTGTTGAAG
TTAAAAGTATTCCTGGAGATATTTTCTTTTCCGAATAACTTTAACACGGA
TCTAGAAAGACAgcttttgaaaatcattgaaataCGTCATTTACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050686-exon-scaffold_182-1491911889:107276..108270 | TCONS_00050686-exon-scaffold_182-1491911889:107276..108270 | Clytia hemisphaerica | exon |
| TCONS_00050686-exon-scaffold_182-1510915933:107276..108270 | TCONS_00050686-exon-scaffold_182-1510915933:107276..108270 | Clytia hemisphaerica | exon |
| TCONS_00050686-exon-scaffold_182-1575043694:107276..108270 | TCONS_00050686-exon-scaffold_182-1575043694:107276..108270 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_182 | supercontig | scaffold_182:107276..108270 . |
Blast
The following BLAST results are available for this feature:
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