TCONS_00050692 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050692
Unique NameTCONS_00050692
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length145

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050692 ID=TCONS_00050692|Name=TCONS_00050692|organism=Clytia hemisphaerica|type=transcript|length=145bp
ttcagttgGTTGACTTTTGTACCTGATGACTCAAGGGCGTACAAACTAAt
gcagaaaaatatttcaaaaaagagGAATTCATGGTCGCAGTGGATGGAAG
AACAAGAGGTCGTGCTCTACATCAACAGCGAAGAAAGGATTTTTC
Run BLAST on NCBI

transcript from alignment at scaffold_183:22985..23349+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050692 ID=TCONS_00050692|Name=TCONS_00050692|organism=Clytia hemisphaerica|type=transcript|length=365bp|location=Sequence derived from alignment at scaffold_183:22985..23349+ (Clytia hemisphaerica)
ttcagttgGTTGACTTTTGTACCTGATGACTCAAGGGCGTACAAACTAAt
gcagaaaaatatttcaaaaaagagGAATTCATGGGCGCAGTGGATGGAAG
AACAAGAGGTTGCGCTCTACATCAACAGCGAAGAAAGGATTTTTCTTTTG
GACAGGGAACACATGTGAATTTTCTCACAAGGTGAGTTTTGTGTTCAGGG
AAAAATGAAGATACTAATCACattcgtttttattttcaggggcGGATACA
GGAATTTTTATCACTGTGTGAAAATTTCGGTTTACCCCGATTTTCCAATA
TGNGTCGCAGTGGATGGAAGAACAAGAGGTCGTGCTCTACATCAACAGCG
AAGAAAGGATTTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032119XLOC_032119Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050692-exon-scaffold_183-1491911889:22985..23068TCONS_00050692-exon-scaffold_183-1491911889:22985..23068Clytia hemisphaericaexon
TCONS_00050692-exon-scaffold_183-1510915933:22985..23068TCONS_00050692-exon-scaffold_183-1510915933:22985..23068Clytia hemisphaericaexon
TCONS_00050692-exon-scaffold_183-1575043694:22985..23068TCONS_00050692-exon-scaffold_183-1575043694:22985..23068Clytia hemisphaericaexon
TCONS_00050692-exon-scaffold_183-1491911889:23289..23349TCONS_00050692-exon-scaffold_183-1491911889:23289..23349Clytia hemisphaericaexon
TCONS_00050692-exon-scaffold_183-1510915933:23289..23349TCONS_00050692-exon-scaffold_183-1510915933:23289..23349Clytia hemisphaericaexon
TCONS_00050692-exon-scaffold_183-1575043694:23289..23349TCONS_00050692-exon-scaffold_183-1575043694:23289..23349Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_183supercontigscaffold_183:22985..23349 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050692 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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