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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050721 ID=TCONS_00050721|Name=TCONS_00050721|organism=Clytia hemisphaerica|type=transcript|length=1016bp
CAATTCGCGAAGGAAAGAGAAGATCGGGGAGTACAAACGTGGCCAGTACG
TCAACGAGGTGccaaaagaaaaacgaaaaactgTTATTGTTAGTAGTGAC
GAGGAAGAAGATTGATATACATTATTTACAAACATTTTCTATTTCGTTTT
CCAAGCTTCTTTTTATCCCCAAGCCAATCGAGTCAAAATTATTAGGAGTT
AAATTTGATTATCTTGGTATATCAGCATTCCttagcttttttatttattg
aaagtttttaCCTACAGTATTCGCAATTTGTCTAAATTTAATTATCCTTG
ACACCGATAGTTGACCGAAAACACCGAAATAGAGATTTAAAAATCTGATG
TTCTTGAAGTACCAATTACCGCAACCTATTATTTTCCCTTAATACCGATC
TAAAGCGAGGGCAATATCGATAACCTATTAGCCCATCCGTTAATTCCACC
TTTTTGATTAGCTCATTAATATAAAAAAAggctttcaaatattttcatat
atcGTCTTTTTTGTCTGGAACAGCTGTACTGTACATCAAATTTAAGATCT
GGAACCGATTAGAGAAATGTTCCTTGATAATAACGAAAGTTCATCGGtaa
ctttgaatattttcttcACGAATGCATCGTCGTGTCGTCTTCTGTCTTAG
TCCAAAGGAATGCGATAGATAGTCCAACGTTAAGTACATAAAATAGAAAC
AAACGGTATACAGCTAATAGTGTTTAGCAAGCGTATATTAGGTATTAGGT
GTGACTAGTATAAACTTtactaggaatttgagaaaaaaagggggAGGATG
AAGTCTCCCAAAGAGAATAtgtataaaaacaaatatttaaaCATATGTTT
TTATATTCTCTTTCAGTCTCCCTAGTCTATctgcttccgccgggcctgct
CCATAAATTTCCTTTAAAGGGGACGGCGTGGGGACGGCGCAtgttatata
aaaatttttcttacttGTTTTATTTCCCAAGATGTGGTTCAATCATTTGC
GTTCTGAGAGAGATTT Run BLAST on NCBI transcript from alignment at scaffold_185:107169..108184+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050721 ID=TCONS_00050721|Name=TCONS_00050721|organism=Clytia hemisphaerica|type=transcript|length=1016bp|location=Sequence derived from alignment at scaffold_185:107169..108184+ (Clytia hemisphaerica)
CAATTCGCGAAGGAAAGAGAAGATCGGGGAGTACAAACGTGGCCAGTACG
TCAACGAGGTGccaaaagaaaaacgaaaaactgTTATTGTTAGTAGTGAC
GAGGAAGAAGATTGATATACATTATTTACAAACATTTTCTATTTCGTTTT
CCAAGCTTCTTTTTATCCCCAAGCCAATCGAGTCAAAATTATTAGGAGTT
AAATTTGATTATCTTGGTATATCAGCATTCCttagcttttttatttattg
aaagtttttaCCTACAGTATTCGCAATTTGTCTAAATTTAATTATCCTTG
ACACCGATAGTTGACCGAAAACACCGAAATAGAGATTTAAAAATCTGATG
TTCTTGAAGTACCAATTACCGCAACCTATTATTTTCCCTTAATACCGATC
TAAAGCGAGGGCAATATCGATAACCTATTAGCCCATCCGTTAATTCCACC
TTTTTGATTAGCTCATTAATATAAAAAAAggctttcaaatattttcatat
atcGTCTTTTTTGTCTGGAACAGCTGTACTGTACATCAAATTTAAGATCT
GGAACCGATTAGAGAAATGTTCCTTGATAATAACGAAAGTTCATCGGtaa
ctttgaatattttcttcACGAATGCATCGTCGTGTCGTCTTCTGTCTTAG
TCCAAAGGAATGCGATAGATAGTCCAACGTTAAGTACATAAAATAGAAAC
AAACGGTATACAGCTAATAGTGTTTAGCAAGCGTATATTAGGTATTAGGT
GTGACTAGTATAAACTTtactaggaatttgagaaaaaaagggggAGGATG
AAGTCTCCCAAAGAGAATAtgtataaaaacaaatatttaaaCATATGTTT
TTATATTCTCTTTCAGTCTCCCTAGTCTATctgcttccgccgggcctgct
CCATAAATTTCCTTTAAAGGGGACGGCGTGGGGACGGCGCAtgttatata
aaaatttttcttacttGTTTTATTTCCCAAGATGTGGTTCAATCATTTGC
GTTCTGAGAGAGATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050721-exon-scaffold_185-1491911889:107169..108184 | TCONS_00050721-exon-scaffold_185-1491911889:107169..108184 | Clytia hemisphaerica | exon |
| TCONS_00050721-exon-scaffold_185-1510915933:107169..108184 | TCONS_00050721-exon-scaffold_185-1510915933:107169..108184 | Clytia hemisphaerica | exon |
| TCONS_00050721-exon-scaffold_185-1575043694:107169..108184 | TCONS_00050721-exon-scaffold_185-1575043694:107169..108184 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_185 | supercontig | scaffold_185:107169..108184 + |
Blast
The following BLAST results are available for this feature:
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