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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050782 ID=TCONS_00050782|Name=TCONS_00050782|organism=Clytia hemisphaerica|type=transcript|length=1163bp
ACCGGATCCAACTTCCTAAACGATGAATAAACCCAGAATCGGCGGGTTTT
CGCAACCAGCCGGGTTGCCCAGACTCAAGGCCTGGCCTCTCATCACCGTG
CACAGCCTAATAGCTACAGGAAACTGTCCATCGCGCGTAATTCGTGTTGG
ACAAAATCTCTTGCTGTATGAAATGGAAAACACAAAGCCTAAAACAACGC
TATGGACAGTTTCCCTACCGTATCATCCTCGCAGCTGAGANCGGCCagaa
atataataaaattgttCCCATTTTTGCGAGCCCCTTGCATAACACCCAAA
ACCTAAttccaaataaaaatgttaaatatcACACAATCAAACATCTGTTA
GAGTTCATACCAATCATATTGAAAGCTTTTTATCCATATGGCTATTTCTT
GTTCCACCTTGTTCCAAGCAACTGAACTTTAGCATTCTCTTAAAGTATGT
AAATAAAATGATAACCTGGGACAATATAAAGCTATGTNAATACTGAAACT
TAAGTGAGATCCGCCACCAGCCGGGAAGGAGCCGGACTTTGTTCCGAATC
TGATCTCCTTATCACGATGGGTTTGCTTCAGAATCAGCGGATTTTCGCAA
CCAGCCGGGTTGCCCAGACAGCCGGCCTGGATCCTCACAACTTGCACTAC
AAACAATTACACTAACATCCTCGCTGCTGAGAGACTCCTAACCGTACAGC
CGGTCCGGTAGGAGAATTTATCACAACCGTGTGCGCCCGAAAACTGAGGA
GGTCCGCCACCAGCCGGGATAAAGCCGGACTTTGTTCCGAATCTGACCTC
CCTATCGAGANGAATCTCCCAATACCAGCgacaatcaccttggccaacat
ctcccaataccagcgacaatcaccttggccaacatctcccAATACCAACG
ACAATCCCCTTGGCCATCATCTCCAAAAACCAGCGACAATCACCTCGGCC
CAACATCTCATCACCACCCATCTCCTTTGCCAAATTTAGTTGCAGATATT
GTTATATACTTGATAATATCTTGATGGTTTGTTTCATACAGTTTTCCCCC
AAAAAAAATACTGTTTGAATGTTGTCTCCTTTCGTTTCGTGTGCTACGAA
AATTGTACGCTTCACTGCACAAACTACATTTATATCCATGAATGTGCATA
CTCTATATCTCTT Run BLAST on NCBI transcript from alignment at scaffold_186:115980..117142+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050782 ID=TCONS_00050782|Name=TCONS_00050782|organism=Clytia hemisphaerica|type=transcript|length=1163bp|location=Sequence derived from alignment at scaffold_186:115980..117142+ (Clytia hemisphaerica)
ACCGGATCCAACTTCCTAAACGATGAATAAACCCAGAATCGGCGGGTTTT
CGCAACCAGCCGGGTTGCCCAGACTCAAGGCCTGGCCTCTCATCACCGTG
CACAGCCTAATAGCTACAGGAAACTGTCCATCGCGCGTAATTCGTGTTGG
ACAAAATCTCTTGCTGTATGAAATGGAAAACACAAAGCCTAAAACAACGC
TATGGACAGTTTCCCTACCGTATCATCCTCGCAGCTGAGANCGGCCagaa
atataataaaattgttCCCATTTTTGCGAGCCCCTTGCATAACACCCAAA
ACCTAAttccaaataaaaatgttaaatatcACACAATCAAACATCTGTTA
GAGTTCATACCAATCATATTGAAAGCTTTTTATCCATATGGCTATTTCTT
GTTCCACCTTGTTCCAAGCAACTGAACTTTAGCATTCTCTTAAAGTATGT
AAATAAAATGATAACCTGGGACAATATAAAGCTATGTNAATACTGAAACT
TAAGTGAGATCCGCCACCAGCCGGGAAGGAGCCGGACTTTGTTCCGAATC
TGATCTCCTTATCACGATGGGTTTGCTTCAGAATCAGCGGATTTTCGCAA
CCAGCCGGGTTGCCCAGACAGCCGGCCTGGATCCTCACAACTTGCACTAC
AAACAATTACACTAACATCCTCGCTGCTGAGAGACTCCTAACCGTACAGC
CGGTCCGGTAGGAGAATTTATCACAACCGTGTGCGCCCGAAAACTGAGGA
GGTCCGCCACCAGCCGGGATAAAGCCGGACTTTGTTCCGAATCTGACCTC
CCTATCGAGANGAATCTCCCAATACCAGCgacaatcaccttggccaacat
ctcccaataccagcgacaatcaccttggccaacatctcccAATACCAACG
ACAATCCCCTTGGCCATCATCTCCAAAAACCAGCGACAATCACCTCGGCC
CAACATCTCATCACCACCCATCTCCTTTGCCAAATTTAGTTGCAGATATT
GTTATATACTTGATAATATCTTGATGGTTTGTTTCATACAGTTTTCCCCC
AAAAAAAATACTGTTTGAATGTTGTCTCCTTTCGTTTCGTGTGCTACGAA
AATTGTACGCTTCACTGCACAAACTACATTTATATCCATGAATGTGCATA
CTCTATATCTCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050782-exon-scaffold_186-1491911889:115980..117142 | TCONS_00050782-exon-scaffold_186-1491911889:115980..117142 | Clytia hemisphaerica | exon |
| TCONS_00050782-exon-scaffold_186-1510915933:115980..117142 | TCONS_00050782-exon-scaffold_186-1510915933:115980..117142 | Clytia hemisphaerica | exon |
| TCONS_00050782-exon-scaffold_186-1575043694:115980..117142 | TCONS_00050782-exon-scaffold_186-1575043694:115980..117142 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_186 | supercontig | scaffold_186:115980..117142 + |
Blast
The following BLAST results are available for this feature:
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