TCONS_00050815 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050815
Unique NameTCONS_00050815
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1511

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050815 ID=TCONS_00050815|Name=TCONS_00050815|organism=Clytia hemisphaerica|type=transcript|length=1511bp
ATTATGCAAACAGGTCATCGATAAAAAAGAAGACTACAACAAAGAAATTA
ACTGAAAGACATAGATAGAAAATGAGGGGACTGATCATTTTGCTGGCTTG
TGTTGTCAACTTTACGTTCGCATCACATGGATCCCATGGTTACAAAGCAA
GTGATGCTTGTACCACTTTCTCCGAATTCGCTCTTGTTTTGGACGAATCG
AAATCCATTCAACCAGACGATTGGAAAGCTGTAAAAAACTTCGCCAGCGA
AATAATCCAGACTGTTGGGATTTCGGCTGCCGGCAATAGAGCTGGTATTG
CATCATTCTCTGACGAAGCAAGGATCAGAATCACGTGTAAAGAACATGAT
AATACGAAGGACTTTGAAAAAGCAATTGAAGGCTTGAATCAGACAGGCGA
TTATACGAACATGGAAGATGGCTTGATTAAAGgaaaatcattATTGGAGA
AGGGGTCAGGCTGTGGAGAACGTCCTTCAGTTTTCTCAAAAGTATTGGTC
ATTCTATCTGATGGTATTCCAAATAAAAGACCAAGAGGGTCTGATGGTGA
TGGGTTTGACTCACTCTTCCAAAGAGCCAAAGAAATCCGCGGTGACGGCA
CCAAAATCATTGCTATCGGCGTTGGAGATGAATTCGAAGAATCCAAACAG
CAAAAACGCGATTTCACTGGTTTAGGCATCCTCCGTAAAATTACTGGAAG
CCCAATGTACGTTTTCACGAGTCAAACATTCAGTCAATTAACCAATAGTG
ATTTCATCAAACAAGTTATCGACCCTATTTGTACAGATCCTTTAAAGACA
TCTGTTAAACCATTCCCAAGAACGAAACCGAAGCCTACTCAACCAGGTGG
TGGATCTAAAACAAAGTCGCCAACTACAAAACCAGTCACTCAAGACCCGA
CAAAAGCAACAACAAAGGCTACAGAACCAGCTTCAGAGCCGTCCACAGTC
AAACCTAACCATCGAACAAAACAAACTCCCAAAACTCCTTCCACTAAAAA
ACCTACACCTACACAAAAGAAACCAGATACAACTAAGGGTCCAGCACCAC
GACCTACGACCTCAAAACCAGGTCCCCCAGGTCCAACTGAAGACCCAGAC
ACTGGAATATGTAGATGTATTGGTGCAACTGAAAGTCACTTCCCAGCATT
GAGTTTATCTGTCTTCGATATCGAAGAGTTCCCAGGAGAAGCTCGAAAAG
ACAAATTAAAAGCAGCCATTACAAGTATCATTAAACAACGACGTCAAATC
AAAGTGCTCCGTGCGCAATACAACGGTTGCAAAAAATCTTTACGTAACAT
GCTACTCAAGactgtcaaaaaattcaaggaCGGCACTGATCTTTTCCTTA
ACATTGATGAATGCACTGCAAAGGCTGAATGTAAATTCCCAACATGGATT
ATGAGGTTGGAACAGAAGAAATGTAAATTAGAAGATGAATTGAGATGGTA
TGAAGGAACCTTTGGACGCATTTATGATTATGGAGAGAACGCTTATCAAC
AACTATCTGGT
Run BLAST on NCBI

protein sequence of TCONS_00050815-protein

>TCONS_00050815-protein ID=TCONS_00050815-protein|Name=TCONS_00050815-protein|organism=Clytia hemisphaerica|type=polypeptide|length=480bp
MRGLIILLACVVNFTFASHGSHGYKASDACTTFSEFALVLDESKSIQPDD
WKAVKNFASEIIQTVGISAAGNRAGIASFSDEARIRITCKEHDNTKDFEK
AIEGLNQTGDYTNMEDGLIKGKSLLEKGSGCGERPSVFSKVLVILSDGIP
NKRPRGSDGDGFDSLFQRAKEIRGDGTKIIAIGVGDEFEESKQQKRDFTG
LGILRKITGSPMYVFTSQTFSQLTNSDFIKQVIDPICTDPLKTSVKPFPR
TKPKPTQPGGGSKTKSPTTKPVTQDPTKATTKATEPASEPSTVKPNHRTK
QTPKTPSTKKPTPTQKKPDTTKGPAPRPTTSKPGPPGPTEDPDTGICRCI
GATESHFPALSLSVFDIEEFPGEARKDKLKAAITSIIKQRRQIKVLRAQY
NGCKKSLRNMLLKTVKKFKDGTDLFLNIDECTAKAECKFPTWIMRLEQKK
CKLEDELRWYEGTFGRIYDYGENAYQQLSG
Run BLAST on NCBI

transcript from alignment at scaffold_189:128555..133780-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050815 ID=TCONS_00050815|Name=TCONS_00050815|organism=Clytia hemisphaerica|type=transcript|length=5226bp|location=Sequence derived from alignment at scaffold_189:128555..133780- (Clytia hemisphaerica)
ATTATGCAAACAGGTCATCGATAAAAAAGAAGACTACAACAAAGAAATTA
ACTGAAAGACATAGATAGAAAATGAGGGGACTGATCATTTTGCTGGCTTG
TGTTGTCAACTGTAAGTATCTGAACTTGATTATTCATTTACAAGACCTGC
ATTCGTACTCTCTCTTATTTGGAAATTCAGTCAAATATTTTAACATATGT
CCTAGTGAAAAGAGCATTTTCAATCATTATTTTGGATTCTTTGCAACATC
CTTGTTGGTGATTTTTATTCGAAATTTGACACTGGTTTAAAGCACTTTTA
TACTGAAGATACTTAAAGAGCGAGAAACGTTGTTCAAAAATCATATAACA
TTATGAATTTTCATCTGTTGACTCTCATGTTTGTAACTAGTGGATCTTCT
CGAATTAACGCAAAAATATTTAATTCGGCTCCCATTAACATATGGGCATG
GCATTCATGAAAGCAAGTATTAAAAGAGGATATACTGCAGAAGGGGGATA
ATTTCACTAAATCAGTCAAAAAATGCAAAAAGATATACAAAAAATAAAAA
ATCCGCTTTCATTTTCAATCTTCAATCAAAATTCTTCACTACAAAATGGC
GTCGATTTCGATTTCTTTCCTGTTTACACTCTTTCGGTCAATCTTAACAT
ATCTTTATCAAATCCGGCGATTTAAAATACACCTGCTTCAATATACGCAT
ATTTCATAATGGTATTATCAATCACGTAACAAGATTTAGCTTTGATTAAT
CAGAAAGCCATTTAAAGCATTACACTCGTACGGTAATTCCATAAACTTAA
GTCCTCTCTAATTAAGAAAAGAATTGATGCTATCAAATCCCTAAAATATC
AGCTTCAGTAATTACTAAGAATAAAATGAAAAAAATAATACTTTTAAGTG
TTTTTTTAAAGCAGGTAATACGGGCGGATCATCTCCAAGTAGATCCTGAT
TGCTCCATTGAATTTTGCATGAGGAGCCAGTATATGCAGGGGGGTTATCC
ATGTATCAATATCAGTGTCTACTCGGAAACTACTAATGTGGAGGTTTAGG
TACGCAACCAATTTAAATGCTTCGATAGAAGGCCCTGCTTAGTAGGGTTG
TTGCCAAAAAGCAAATCCTTCAGTCTAAATCATCTGCGAAAGACTTTTTT
CTGAGTCGCTTGCTGTGGAAAAATAATTCAATATCAAATTAAAATTTCCA
TCACATCTGTTTTTTATTCTAAAGTTACGTTCGCATCACATGGATCCCAT
GGTTACAAAGCAAGTGATGCTTGTACCACTTTCTCCGAATTCGCTCTTGT
TTTGGACGAATCGAAATCCATTCAACCAGACGATTGGAAAGCTGTAAAAA
ACTTCGCCAGCGAAATAATCCAGACTGTTGGGATTTCGGCTGCCGGCAAT
AGAGCTGGTATTGCATCATTCTCTGACGAAGCAAGGATCAGAATCACGTG
TAAAGAACATGATAATACGAAGGACTTTGAAAAAGCAATTGAAGGCTTGA
ATCAGACAGGCGATTATACGAACATGGAAGATGGCTTGATTAAAGGTATA
TTGATTGTTCATTACTTTAGATAATGATTAGGAGAGAACTCTAAACAGAA
CATCCTTTCTCTAAACGTTTCGGCCTCAACAGTAAAATATTTTGTTGTAA
TCAACAATTCAACATTACAACAAAATTTTTTGCTGATGATGGTACTCTGT
TGAGGCCGAAACGTTTTGAAAAATAAATTTCAAAAATGAACCAAAAGCAG
CTTCTGTTATTTAATCTTTTACTGAAATTGTATATGGAAGGATTGATTTA
TTTAACATCCTTTCTATAGTACCTAACAGTTTCTTGGCAAGGTCTTGTTC
TTGGTACGAAATTGCAAGGTATGACAAACAAAATCCAAACAGCATTGAAG
ACAAACAGATACCCAGAGAGACAGACATTCTAAAATTCTAGTTACTTCTT
TAGTATAAATAGGGAAATTGCGACTATTGAACTCTTCTTTTTATATTCAT
TTTTTTAGGAAAATCATTATTGGAGAAGGGGTCAGGCTGTGGAGAACGTC
CTTCAGTTTTCTCAAAAGTATTGGTCATTCTATCTGATGGTATTCCAAAT
AAAAGACCAAGAGGGTCTGATGGTGATGGGTTTGACTCACTCTTCCAAAG
AGCCAAAGAAATCCGCGGTGACGGTAAGTTCAACCACTGGAATCCGTGAA
TTAATAGCGAGTTTATGTATTTCAACTTTTGAGGACGGTAGAGTGACTGA
AGCAATTTGGAATAACCCGCACAGGGGGGGGGGCACGCAGTTACTACAAG
ACATGATGTGTAGTAAGTGCTTTTTCAACACTTTTTTTCAGGACCACCAC
CCTTTGCAGTTACTACACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCTGAC
CCGCACACAAATCGAGGACAGTAAAAGTGCTAATTTACTGTCGTCCTGAG
TCAGTCAGGATGAAGACAAATTTAGAGCTTTACCGTCTCTGTCGCAGAAA
AACACACATACATAAACTCGGTAATATCAGAGTGTGGTTTGCTTTTAAAG
TAGGCTATTGAATTTTAGAAAGTCATTTGGCCATTGATTCAATCATAAAT
TGCTACTAAGTACTTAATAACTTTCACTTAGGATTGCATACTAGTTAAGA
TTTTACCCGTAACAACGTCTCTTATGCAAATTAAGCAAAACTTTGTCGAT
TTTTGTGCGAGAGAAATTGGTAGATTGATTTTGCGATTGATTGCGATTGA
TCAGGTTCTACAGACAAGACAAAAAGACAACTTATTAATTTCCTCAATTC
AACAGGCACCAAAATCATTGCTATCGGCGTTGGAGATGAATTCGAAGAAT
CCAAACAGCAAAAACGCGATTTCACTGGTTTAGGCATCCTCCGTAAAATT
ACTGGAAGCCCAATGTACGTTTTCACGAGTCAAACATTCAGTCAATTAAC
CAATAGTGATTTCATCAAACAAGTTATCGACCCTATTTGTACAGATCCTT
TAAAGACATCTGTTAAACCATTCCCAAGAACGAAACCGAAGCCTACTCAA
CCAGGTGGTGGATCTAAAACAAAGTCGCCAACTACAAAACCAGTCACTCA
AGACCCGACAAAAGCAACAACAAAGGCTACAGAACCAGCTTCAGAGCCGT
CCACAGTCAAACCTAACCATCGAACAAAACAAACTCCCAAAACTCCTTCC
ACTAAAAAACCTACACCTACACAAAAGAAACCAGATACAACTAAGGGTCC
AGCACCACGACCTACGACCTCAAAACCAGGTCCCCCAGGTCCAACTGAAG
ACCCAGACACTGGAATATGTAGATGTATTGGTGCAACTGAAAGTCACTTC
CCAGCATTGAGTTTATCTGTCTTCGATATCGAAGAGTTCCCAGGTAAATA
TTTTTCGAATTTTTTAGCCTAAGTNGACACTGGAATATGTAGATGCACTG
GTGCAACTGAAAGTCACTTCCCAGCATTGAGTTTATCTGTCTTCGATATC
GAACAGTTCCCAGGTAAATATCTTTCGAATTTTTTAGCCTAAGTCAATCG
AACAACCTCTAACTAAAATTGTGGGTAAATTCTCTTGTTAGAGTGATACA
TAAACTGGATTAGAAGAACCTTAAACCTTTTTAGTTCGGATGGTTTAGAT
TTCAAAGTAAAATTTATTCAATGGATTACCCAGGGCAAGTGGGTGAGTAA
ACATGAAACTATAAAGCTGCTAACTTTCTAAATTTATATAGGAGAAGCTC
GAAAAGACAAATTAAAAGCAGCCATTACAAGTATCATTAAACAACGACGT
CAAATCAAAGTGCTCCGTGCGCAATACAACGGTTGCAAAAAATCTTTACG
TAACATGCTACTCAAGGTAAGTTTACGATTATGTTCAACACAAGTCACTA
ACTAAACAGTAAGCTCCAGACTACTGAAAGTGTATGGAGTTGGGGATCTG
GTTGTCGATACGATTTGACAGCCGGTAGAGTTAGCGGTCTTCTTCGAAAT
TAAGTCTGCCGCGGCAGATTTTCTGTCGATTTTCTTCATTAATAGCTGTA
AATTATGAACATAATTATTTTCCCGCGTGTAAAATTGCTGTAATATGGAA
GGTAACATCTTCTACGTAATTATGGAGTGAAAGTTCACCGTGTCATCAAA
TACTTCTTCCAAAAGATACGCGAAGGGCTCTCTCATTGTGTTTCTGTATG
ATGAATCATTTCATTTTTTCTTTAATTTTCAGACTGTCAAAAAATTCAAG
GACGGCACTGATCTTTTCCTTAACATTGATGAATGCACTGCAAAGGCTGA
ATGTAAATTCCCAACATGGATTATGAGGTTGGAACAGAAGAAATGTAAAT
TAGAAGATGAATTGAGATGGTATGAAGGAACCTTTGGACGCATTTATGAT
TATGGTAAGATAGTTACTTGATTCCTTTTAAGTAATTCTGATAGGAATCG
TACATAGCAAACCATGCACAAACCTTGACTTTACCATATCTCAGTAAAAT
AATTATCCAATTGTTGGTGGAAAGAAAAATTAACTTTTTTTGCTTAAACT
GAATCGTCAAATCTGTTTTTTCGAAATCCTTCGAAAATTATTTTTTTTGG
ATTTCTAGGTAGTGGTGTTCTAAATTTTCTTGGTATATTTTTTTCAGGAG
AGAACGCTTATCAACAACTATCTGGT

Coding sequence (CDS) from alignment at scaffold_189:128555..133780-

>TCONS_00050815 ID=TCONS_00050815|Name=TCONS_00050815|organism=Clytia hemisphaerica|type=CDS|length=10080bp|location=Sequence derived from alignment at scaffold_189:128555..133780- (Clytia hemisphaerica)
GAGAGAACGCTTATCAACAACTATCTGGTACTGTCAAAAAATTCAAGGAC
GGCACTGATCTTTTCCTTAACATTGATGAATGCACTGCAAAGGCTGAATG
TAAATTCCCAACATGGATTATGAGGTTGGAACAGAAGAAATGTAAATTAG
AAGATGAATTGAGATGGTATGAAGGAACCTTTGGACGCATTTATGATTAT
GGAGAAGCTCGAAAAGACAAATTAAAAGCAGCCATTACAAGTATCATTAA
ACAACGACGTCAAATCAAAGTGCTCCGTGCGCAATACAACGGTTGCAAAA
AATCTTTACGTAACATGCTACTCAAGGCACCAAAATCATTGCTATCGGCG
TTGGAGATGAATTCGAAGAATCCAAACAGCAAAAACGCGATTTCACTGGT
TTAGGCATCCTCCGTAAAATTACTGGAAGCCCAATGTACGTTTTCACGAG
TCAAACATTCAGTCAATTAACCAATAGTGATTTCATCAAACAAGTTATCG
ACCCTATTTGTACAGATCCTTTAAAGACATCTGTTAAACCATTCCCAAGA
ACGAAACCGAAGCCTACTCAACCAGGTGGTGGATCTAAAACAAAGTCGCC
AACTACAAAACCAGTCACTCAAGACCCGACAAAAGCAACAACAAAGGCTA
CAGAACCAGCTTCAGAGCCGTCCACAGTCAAACCTAACCATCGAACAAAA
CAAACTCCCAAAACTCCTTCCACTAAAAAACCTACACCTACACAAAAGAA
ACCAGATACAACTAAGGGTCCAGCACCACGACCTACGACCTCAAAACCAG
GTCCCCCAGGTCCAACTGAAGACCCAGACACTGGAATATGTAGATGTATT
GGTGCAACTGAAAGTCACTTCCCAGCATTGAGTTTATCTGTCTTCGATAT
CGAAGAGTTCCCAGGAAAATCATTATTGGAGAAGGGGTCAGGCTGTGGAG
AACGTCCTTCAGTTTTCTCAAAAGTATTGGTCATTCTATCTGATGGTATT
CCAAATAAAAGACCAAGAGGGTCTGATGGTGATGGGTTTGACTCACTCTT
CCAAAGAGCCAAAGAAATCCGCGGTGACGTTACGTTCGCATCACATGGAT
CCCATGGTTACAAAGCAAGTGATGCTTGTACCACTTTCTCCGAATTCGCT
CTTGTTTTGGACGAATCGAAATCCATTCAACCAGACGATTGGAAAGCTGT
AAAAAACTTCGCCAGCGAAATAATCCAGACTGTTGGGATTTCGGCTGCCG
GCAATAGAGCTGGTATTGCATCATTCTCTGACGAAGCAAGGATCAGAATC
ACGTGTAAAGAACATGATAATACGAAGGACTTTGAAAAAGCAATTGAAGG
CTTGAATCAGACAGGCGATTATACGAACATGGAAGATGGCTTGATTAAAG
ATGAGGGGACTGATCATTTTGCTGGCTTGTGTTGTCAACTGAGAGAACGC
TTATCAACAACTATCTGGTACTGTCAAAAAATTCAAGGACGGCACTGATC
TTTTCCTTAACATTGATGAATGCACTGCAAAGGCTGAATGTAAATTCCCA
ACATGGATTATGAGGTTGGAACAGAAGAAATGTAAATTAGAAGATGAATT
GAGATGGTATGAAGGAACCTTTGGACGCATTTATGATTATGGAGAAGCTC
GAAAAGACAAATTAAAAGCAGCCATTACAAGTATCATTAAACAACGACGT
CAAATCAAAGTGCTCCGTGCGCAATACAACGGTTGCAAAAAATCTTTACG
TAACATGCTACTCAAGGCACCAAAATCATTGCTATCGGCGTTGGAGATGA
ATTCGAAGAATCCAAACAGCAAAAACGCGATTTCACTGGTTTAGGCATCC
TCCGTAAAATTACTGGAAGCCCAATGTACGTTTTCACGAGTCAAACATTC
AGTCAATTAACCAATAGTGATTTCATCAAACAAGTTATCGACCCTATTTG
TACAGATCCTTTAAAGACATCTGTTAAACCATTCCCAAGAACGAAACCGA
AGCCTACTCAACCAGGTGGTGGATCTAAAACAAAGTCGCCAACTACAAAA
CCAGTCACTCAAGACCCGACAAAAGCAACAACAAAGGCTACAGAACCAGC
TTCAGAGCCGTCCACAGTCAAACCTAACCATCGAACAAAACAAACTCCCA
AAACTCCTTCCACTAAAAAACCTACACCTACACAAAAGAAACCAGATACA
ACTAAGGGTCCAGCACCACGACCTACGACCTCAAAACCAGGTCCCCCAGG
TCCAACTGAAGACCCAGACACTGGAATATGTAGATGTATTGGTGCAACTG
AAAGTCACTTCCCAGCATTGAGTTTATCTGTCTTCGATATCGAAGAGTTC
CCAGGAAAATCATTATTGGAGAAGGGGTCAGGCTGTGGAGAACGTCCTTC
AGTTTTCTCAAAAGTATTGGTCATTCTATCTGATGGTATTCCAAATAAAA
GACCAAGAGGGTCTGATGGTGATGGGTTTGACTCACTCTTCCAAAGAGCC
AAAGAAATCCGCGGTGACGTTACGTTCGCATCACATGGATCCCATGGTTA
CAAAGCAAGTGATGCTTGTACCACTTTCTCCGAATTCGCTCTTGTTTTGG
ACGAATCGAAATCCATTCAACCAGACGATTGGAAAGCTGTAAAAAACTTC
GCCAGCGAAATAATCCAGACTGTTGGGATTTCGGCTGCCGGCAATAGAGC
TGGTATTGCATCATTCTCTGACGAAGCAAGGATCAGAATCACGTGTAAAG
AACATGATAATACGAAGGACTTTGAAAAAGCAATTGAAGGCTTGAATCAG
ACAGGCGATTATACGAACATGGAAGATGGCTTGATTAAAGATGAGGGGAC
TGATCATTTTGCTGGCTTGTGTTGTCAACTGAGAGAACGCTTATCAACAA
CTATCTGGTACTGTCAAAAAATTCAAGGACGGCACTGATCTTTTCCTTAA
CATTGATGAATGCACTGCAAAGGCTGAATGTAAATTCCCAACATGGATTA
TGAGGTTGGAACAGAAGAAATGTAAATTAGAAGATGAATTGAGATGGTAT
GAAGGAACCTTTGGACGCATTTATGATTATGGAGAAGCTCGAAAAGACAA
ATTAAAAGCAGCCATTACAAGTATCATTAAACAACGACGTCAAATCAAAG
TGCTCCGTGCGCAATACAACGGTTGCAAAAAATCTTTACGTAACATGCTA
CTCAAGGCACCAAAATCATTGCTATCGGCGTTGGAGATGAATTCGAAGAA
TCCAAACAGCAAAAACGCGATTTCACTGGTTTAGGCATCCTCCGTAAAAT
TACTGGAAGCCCAATGTACGTTTTCACGAGTCAAACATTCAGTCAATTAA
CCAATAGTGATTTCATCAAACAAGTTATCGACCCTATTTGTACAGATCCT
TTAAAGACATCTGTTAAACCATTCCCAAGAACGAAACCGAAGCCTACTCA
ACCAGGTGGTGGATCTAAAACAAAGTCGCCAACTACAAAACCAGTCACTC
AAGACCCGACAAAAGCAACAACAAAGGCTACAGAACCAGCTTCAGAGCCG
TCCACAGTCAAACCTAACCATCGAACAAAACAAACTCCCAAAACTCCTTC
CACTAAAAAACCTACACCTACACAAAAGAAACCAGATACAACTAAGGGTC
CAGCACCACGACCTACGACCTCAAAACCAGGTCCCCCAGGTCCAACTGAA
GACCCAGACACTGGAATATGTAGATGTATTGGTGCAACTGAAAGTCACTT
CCCAGCATTGAGTTTATCTGTCTTCGATATCGAAGAGTTCCCAGGAAAAT
CATTATTGGAGAAGGGGTCAGGCTGTGGAGAACGTCCTTCAGTTTTCTCA
AAAGTATTGGTCATTCTATCTGATGGTATTCCAAATAAAAGACCAAGAGG
GTCTGATGGTGATGGGTTTGACTCACTCTTCCAAAGAGCCAAAGAAATCC
GCGGTGACGTTACGTTCGCATCACATGGATCCCATGGTTACAAAGCAAGT
GATGCTTGTACCACTTTCTCCGAATTCGCTCTTGTTTTGGACGAATCGAA
ATCCATTCAACCAGACGATTGGAAAGCTGTAAAAAACTTCGCCAGCGAAA
TAATCCAGACTGTTGGGATTTCGGCTGCCGGCAATAGAGCTGGTATTGCA
TCATTCTCTGACGAAGCAAGGATCAGAATCACGTGTAAAGAACATGATAA
TACGAAGGACTTTGAAAAAGCAATTGAAGGCTTGAATCAGACAGGCGATT
ATACGAACATGGAAGATGGCTTGATTAAAGATGAGGGGACTGATCATTTT
GCTGGCTTGTGTTGTCAACTGAGAGAACGCTTATCAACAACTATCTGGTA
CTGTCAAAAAATTCAAGGACGGCACTGATCTTTTCCTTAACATTGATGAA
TGCACTGCAAAGGCTGAATGTAAATTCCCAACATGGATTATGAGGTTGGA
ACAGAAGAAATGTAAATTAGAAGATGAATTGAGATGGTATGAAGGAACCT
TTGGACGCATTTATGATTATGGAGAAGCTCGAAAAGACAAATTAAAAGCA
GCCATTACAAGTATCATTAAACAACGACGTCAAATCAAAGTGCTCCGTGC
GCAATACAACGGTTGCAAAAAATCTTTACGTAACATGCTACTCAAGGCAC
CAAAATCATTGCTATCGGCGTTGGAGATGAATTCGAAGAATCCAAACAGC
AAAAACGCGATTTCACTGGTTTAGGCATCCTCCGTAAAATTACTGGAAGC
CCAATGTACGTTTTCACGAGTCAAACATTCAGTCAATTAACCAATAGTGA
TTTCATCAAACAAGTTATCGACCCTATTTGTACAGATCCTTTAAAGACAT
CTGTTAAACCATTCCCAAGAACGAAACCGAAGCCTACTCAACCAGGTGGT
GGATCTAAAACAAAGTCGCCAACTACAAAACCAGTCACTCAAGACCCGAC
AAAAGCAACAACAAAGGCTACAGAACCAGCTTCAGAGCCGTCCACAGTCA
AACCTAACCATCGAACAAAACAAACTCCCAAAACTCCTTCCACTAAAAAA
CCTACACCTACACAAAAGAAACCAGATACAACTAAGGGTCCAGCACCACG
ACCTACGACCTCAAAACCAGGTCCCCCAGGTCCAACTGAAGACCCAGACA
CTGGAATATGTAGATGTATTGGTGCAACTGAAAGTCACTTCCCAGCATTG
AGTTTATCTGTCTTCGATATCGAAGAGTTCCCAGGAAAATCATTATTGGA
GAAGGGGTCAGGCTGTGGAGAACGTCCTTCAGTTTTCTCAAAAGTATTGG
TCATTCTATCTGATGGTATTCCAAATAAAAGACCAAGAGGGTCTGATGGT
GATGGGTTTGACTCACTCTTCCAAAGAGCCAAAGAAATCCGCGGTGACGT
TACGTTCGCATCACATGGATCCCATGGTTACAAAGCAAGTGATGCTTGTA
CCACTTTCTCCGAATTCGCTCTTGTTTTGGACGAATCGAAATCCATTCAA
CCAGACGATTGGAAAGCTGTAAAAAACTTCGCCAGCGAAATAATCCAGAC
TGTTGGGATTTCGGCTGCCGGCAATAGAGCTGGTATTGCATCATTCTCTG
ACGAAGCAAGGATCAGAATCACGTGTAAAGAACATGATAATACGAAGGAC
TTTGAAAAAGCAATTGAAGGCTTGAATCAGACAGGCGATTATACGAACAT
GGAAGATGGCTTGATTAAAGATGAGGGGACTGATCATTTTGCTGGCTTGT
GTTGTCAACTGAGAGAACGCTTATCAACAACTATCTGGTACTGTCAAAAA
ATTCAAGGACGGCACTGATCTTTTCCTTAACATTGATGAATGCACTGCAA
AGGCTGAATGTAAATTCCCAACATGGATTATGAGGTTGGAACAGAAGAAA
TGTAAATTAGAAGATGAATTGAGATGGTATGAAGGAACCTTTGGACGCAT
TTATGATTATGGAGAAGCTCGAAAAGACAAATTAAAAGCAGCCATTACAA
GTATCATTAAACAACGACGTCAAATCAAAGTGCTCCGTGCGCAATACAAC
GGTTGCAAAAAATCTTTACGTAACATGCTACTCAAGGCACCAAAATCATT
GCTATCGGCGTTGGAGATGAATTCGAAGAATCCAAACAGCAAAAACGCGA
TTTCACTGGTTTAGGCATCCTCCGTAAAATTACTGGAAGCCCAATGTACG
TTTTCACGAGTCAAACATTCAGTCAATTAACCAATAGTGATTTCATCAAA
CAAGTTATCGACCCTATTTGTACAGATCCTTTAAAGACATCTGTTAAACC
ATTCCCAAGAACGAAACCGAAGCCTACTCAACCAGGTGGTGGATCTAAAA
CAAAGTCGCCAACTACAAAACCAGTCACTCAAGACCCGACAAAAGCAACA
ACAAAGGCTACAGAACCAGCTTCAGAGCCGTCCACAGTCAAACCTAACCA
TCGAACAAAACAAACTCCCAAAACTCCTTCCACTAAAAAACCTACACCTA
CACAAAAGAAACCAGATACAACTAAGGGTCCAGCACCACGACCTACGACC
TCAAAACCAGGTCCCCCAGGTCCAACTGAAGACCCAGACACTGGAATATG
TAGATGTATTGGTGCAACTGAAAGTCACTTCCCAGCATTGAGTTTATCTG
TCTTCGATATCGAAGAGTTCCCAGGAAAATCATTATTGGAGAAGGGGTCA
GGCTGTGGAGAACGTCCTTCAGTTTTCTCAAAAGTATTGGTCATTCTATC
TGATGGTATTCCAAATAAAAGACCAAGAGGGTCTGATGGTGATGGGTTTG
ACTCACTCTTCCAAAGAGCCAAAGAAATCCGCGGTGACGTTACGTTCGCA
TCACATGGATCCCATGGTTACAAAGCAAGTGATGCTTGTACCACTTTCTC
CGAATTCGCTCTTGTTTTGGACGAATCGAAATCCATTCAACCAGACGATT
GGAAAGCTGTAAAAAACTTCGCCAGCGAAATAATCCAGACTGTTGGGATT
TCGGCTGCCGGCAATAGAGCTGGTATTGCATCATTCTCTGACGAAGCAAG
GATCAGAATCACGTGTAAAGAACATGATAATACGAAGGACTTTGAAAAAG
CAATTGAAGGCTTGAATCAGACAGGCGATTATACGAACATGGAAGATGGC
TTGATTAAAGATGAGGGGACTGATCATTTTGCTGGCTTGTGTTGTCAACT
GAGAGAACGCTTATCAACAACTATCTGGTACTGTCAAAAAATTCAAGGAC
GGCACTGATCTTTTCCTTAACATTGATGAATGCACTGCAAAGGCTGAATG
TAAATTCCCAACATGGATTATGAGGTTGGAACAGAAGAAATGTAAATTAG
AAGATGAATTGAGATGGTATGAAGGAACCTTTGGACGCATTTATGATTAT
GGAGAAGCTCGAAAAGACAAATTAAAAGCAGCCATTACAAGTATCATTAA
ACAACGACGTCAAATCAAAGTGCTCCGTGCGCAATACAACGGTTGCAAAA
AATCTTTACGTAACATGCTACTCAAGGCACCAAAATCATTGCTATCGGCG
TTGGAGATGAATTCGAAGAATCCAAACAGCAAAAACGCGATTTCACTGGT
TTAGGCATCCTCCGTAAAATTACTGGAAGCCCAATGTACGTTTTCACGAG
TCAAACATTCAGTCAATTAACCAATAGTGATTTCATCAAACAAGTTATCG
ACCCTATTTGTACAGATCCTTTAAAGACATCTGTTAAACCATTCCCAAGA
ACGAAACCGAAGCCTACTCAACCAGGTGGTGGATCTAAAACAAAGTCGCC
AACTACAAAACCAGTCACTCAAGACCCGACAAAAGCAACAACAAAGGCTA
CAGAACCAGCTTCAGAGCCGTCCACAGTCAAACCTAACCATCGAACAAAA
CAAACTCCCAAAACTCCTTCCACTAAAAAACCTACACCTACACAAAAGAA
ACCAGATACAACTAAGGGTCCAGCACCACGACCTACGACCTCAAAACCAG
GTCCCCCAGGTCCAACTGAAGACCCAGACACTGGAATATGTAGATGTATT
GGTGCAACTGAAAGTCACTTCCCAGCATTGAGTTTATCTGTCTTCGATAT
CGAAGAGTTCCCAGGAAAATCATTATTGGAGAAGGGGTCAGGCTGTGGAG
AACGTCCTTCAGTTTTCTCAAAAGTATTGGTCATTCTATCTGATGGTATT
CCAAATAAAAGACCAAGAGGGTCTGATGGTGATGGGTTTGACTCACTCTT
CCAAAGAGCCAAAGAAATCCGCGGTGACGTTACGTTCGCATCACATGGAT
CCCATGGTTACAAAGCAAGTGATGCTTGTACCACTTTCTCCGAATTCGCT
CTTGTTTTGGACGAATCGAAATCCATTCAACCAGACGATTGGAAAGCTGT
AAAAAACTTCGCCAGCGAAATAATCCAGACTGTTGGGATTTCGGCTGCCG
GCAATAGAGCTGGTATTGCATCATTCTCTGACGAAGCAAGGATCAGAATC
ACGTGTAAAGAACATGATAATACGAAGGACTTTGAAAAAGCAATTGAAGG
CTTGAATCAGACAGGCGATTATACGAACATGGAAGATGGCTTGATTAAAG
ATGAGGGGACTGATCATTTTGCTGGCTTGTGTTGTCAACTGAGAGAACGC
TTATCAACAACTATCTGGTACTGTCAAAAAATTCAAGGACGGCACTGATC
TTTTCCTTAACATTGATGAATGCACTGCAAAGGCTGAATGTAAATTCCCA
ACATGGATTATGAGGTTGGAACAGAAGAAATGTAAATTAGAAGATGAATT
GAGATGGTATGAAGGAACCTTTGGACGCATTTATGATTATGGAGAAGCTC
GAAAAGACAAATTAAAAGCAGCCATTACAAGTATCATTAAACAACGACGT
CAAATCAAAGTGCTCCGTGCGCAATACAACGGTTGCAAAAAATCTTTACG
TAACATGCTACTCAAGGCACCAAAATCATTGCTATCGGCGTTGGAGATGA
ATTCGAAGAATCCAAACAGCAAAAACGCGATTTCACTGGTTTAGGCATCC
TCCGTAAAATTACTGGAAGCCCAATGTACGTTTTCACGAGTCAAACATTC
AGTCAATTAACCAATAGTGATTTCATCAAACAAGTTATCGACCCTATTTG
TACAGATCCTTTAAAGACATCTGTTAAACCATTCCCAAGAACGAAACCGA
AGCCTACTCAACCAGGTGGTGGATCTAAAACAAAGTCGCCAACTACAAAA
CCAGTCACTCAAGACCCGACAAAAGCAACAACAAAGGCTACAGAACCAGC
TTCAGAGCCGTCCACAGTCAAACCTAACCATCGAACAAAACAAACTCCCA
AAACTCCTTCCACTAAAAAACCTACACCTACACAAAAGAAACCAGATACA
ACTAAGGGTCCAGCACCACGACCTACGACCTCAAAACCAGGTCCCCCAGG
TCCAACTGAAGACCCAGACACTGGAATATGTAGATGTATTGGTGCAACTG
AAAGTCACTTCCCAGCATTGAGTTTATCTGTCTTCGATATCGAAGAGTTC
CCAGGAAAATCATTATTGGAGAAGGGGTCAGGCTGTGGAGAACGTCCTTC
AGTTTTCTCAAAAGTATTGGTCATTCTATCTGATGGTATTCCAAATAAAA
GACCAAGAGGGTCTGATGGTGATGGGTTTGACTCACTCTTCCAAAGAGCC
AAAGAAATCCGCGGTGACGTTACGTTCGCATCACATGGATCCCATGGTTA
CAAAGCAAGTGATGCTTGTACCACTTTCTCCGAATTCGCTCTTGTTTTGG
ACGAATCGAAATCCATTCAACCAGACGATTGGAAAGCTGTAAAAAACTTC
GCCAGCGAAATAATCCAGACTGTTGGGATTTCGGCTGCCGGCAATAGAGC
TGGTATTGCATCATTCTCTGACGAAGCAAGGATCAGAATCACGTGTAAAG
AACATGATAATACGAAGGACTTTGAAAAAGCAATTGAAGGCTTGAATCAG
ACAGGCGATTATACGAACATGGAAGATGGCTTGATTAAAGATGAGGGGAC
TGATCATTTTGCTGGCTTGTGTTGTCAACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032193XLOC_032193Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050815-exon-scaffold_189-1575043694:133670..133780TCONS_00050815-exon-scaffold_189-1575043694:133670..133780Clytia hemisphaericaexon
TCONS_00050815-exon-scaffold_189-1575043694:132236..132556TCONS_00050815-exon-scaffold_189-1575043694:132236..132556Clytia hemisphaericaexon
TCONS_00050815-exon-scaffold_189-1575043694:131608..131772TCONS_00050815-exon-scaffold_189-1575043694:131608..131772Clytia hemisphaericaexon
TCONS_00050815-exon-scaffold_189-1575043694:129838..130425TCONS_00050815-exon-scaffold_189-1575043694:129838..130425Clytia hemisphaericaexon
TCONS_00050815-exon-scaffold_189-1575043694:129365..129489TCONS_00050815-exon-scaffold_189-1575043694:129365..129489Clytia hemisphaericaexon
TCONS_00050815-exon-scaffold_189-1575043694:128827..128998TCONS_00050815-exon-scaffold_189-1575043694:128827..128998Clytia hemisphaericaexon
TCONS_00050815-exon-scaffold_189-1575043694:128555..128583TCONS_00050815-exon-scaffold_189-1575043694:128555..128583Clytia hemisphaericaexon
TCONS_00050815-exon-scaffold_189-1510915933:133670..133780TCONS_00050815-exon-scaffold_189-1510915933:133670..133780Clytia hemisphaericaexon
TCONS_00050815-exon-scaffold_189-1510915933:132236..132556TCONS_00050815-exon-scaffold_189-1510915933:132236..132556Clytia hemisphaericaexon
TCONS_00050815-exon-scaffold_189-1510915933:131608..131772TCONS_00050815-exon-scaffold_189-1510915933:131608..131772Clytia hemisphaericaexon
TCONS_00050815-exon-scaffold_189-1510915933:129838..130425TCONS_00050815-exon-scaffold_189-1510915933:129838..130425Clytia hemisphaericaexon
TCONS_00050815-exon-scaffold_189-1510915933:129365..129489TCONS_00050815-exon-scaffold_189-1510915933:129365..129489Clytia hemisphaericaexon
TCONS_00050815-exon-scaffold_189-1510915933:128827..128998TCONS_00050815-exon-scaffold_189-1510915933:128827..128998Clytia hemisphaericaexon
TCONS_00050815-exon-scaffold_189-1510915933:128555..128583TCONS_00050815-exon-scaffold_189-1510915933:128555..128583Clytia hemisphaericaexon
TCONS_00050815-exon-scaffold_189-1491911889:133670..133780TCONS_00050815-exon-scaffold_189-1491911889:133670..133780Clytia hemisphaericaexon
TCONS_00050815-exon-scaffold_189-1491911889:132236..132556TCONS_00050815-exon-scaffold_189-1491911889:132236..132556Clytia hemisphaericaexon
TCONS_00050815-exon-scaffold_189-1491911889:131608..131772TCONS_00050815-exon-scaffold_189-1491911889:131608..131772Clytia hemisphaericaexon
TCONS_00050815-exon-scaffold_189-1491911889:129838..130425TCONS_00050815-exon-scaffold_189-1491911889:129838..130425Clytia hemisphaericaexon
TCONS_00050815-exon-scaffold_189-1491911889:129365..129489TCONS_00050815-exon-scaffold_189-1491911889:129365..129489Clytia hemisphaericaexon
TCONS_00050815-exon-scaffold_189-1491911889:128827..128998TCONS_00050815-exon-scaffold_189-1491911889:128827..128998Clytia hemisphaericaexon
TCONS_00050815-exon-scaffold_189-1491911889:128555..128583TCONS_00050815-exon-scaffold_189-1491911889:128555..128583Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050815-proteinTCONS_00050815-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_189supercontigscaffold_189:128555..133780 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0265717	0	0	3.20247	2.5756	0.560519	0.557548	0.0688857	0.0853261	0	0.0544423	0.276666	2.33551	3.03275	0.522455	0.122733	0	0.0579318	0.121243	0.0263455	0	0	0	0.087767	0.02611	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050815 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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