|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050827 ID=TCONS_00050827|Name=TCONS_00050827|organism=Clytia hemisphaerica|type=transcript|length=1211bp
ttgagtttaaaaagATTTCCTTCTGAGAAGTAAAAGGAGTAACTTCAGAA
CCTTTTAAAAACTTGTGATAGTTAAAGGAGCAATAAagtgtacatgtttt
ttttctataagcataacgtttataagcatatgacaTGCTCAGTTTTAAAC
AGTGGCTCTgttgtttaagaacaatagaatgttatgcataatgcgagcct
gatgtaggggtaCACGCTTTgcttaataaaaacaaacaaacatgtGCTCG
AATTTTTGGAGAAATTCGAGTTATGAGAGATTACCCAACATCTTAAAAAA
GTGTAAGATTTCTTTGGTCAATTAATTGAAACATATAGAATCTgctaata
tttttgtaaatgatACCCTCTTGAAGGCTtcagaaaagaaagaaaattac
gAAATATCTCTGAAGAAAAAATGCCAAAACCACGAAACAAACAAGGAAAG
AAAACATTGAAGGAAATCAATGCGATCAGTGAACGTTTGTATAGTTCAAG
TAACGCCAATACAACACGATTAACTAAGAAGGAGATGCCTGGAAAAACTG
GTAAACATTTGAGTAAGGATGACATGAACTCCATGGTGGAAAGACTACAT
GAGTCTGACCCGAACGCTAAACGTAAAGAACTTGGTGAGAAACATAACAT
GAATTTTGATAAAGAACGTCCTGAGAATATGGGTTGGCAGAAGAAGGAAA
AGGAAGAGATTGACGCTGTGACGTCGCGGCTTTTTGTGGCCGATTATAAT
AACCGGAACGTAGGTAAACAAACGGTCCCCAAGGTAACAGATAAGGAGCT
AAGCAAAGAAGAGTTTGATGGTATGGTAGAGCGTTTATTTATAAGTGGAT
ACTCAAATCGAAATTTGGttaaaaatcaacaattttatgaTTTGATTATG
AATAAGAAAAAAGCTGAAGAGAAAACATTGAATAAAGAAGAAGTTGAAGA
GGCACTGGGTCGACTTTCGAAACAGACCCGTGAACCGGCTGAATGTAATA
AAGACATGCTTGGTAAACAAACTTATATTGCCAAAGGGATTTATGGAACT
CACGCAATAAATGGTGGGAATGAAAGATATATACCTAAAGATGGTAGTAG
TAATGGGACCACTAGTATTTAATTTGAATAAAGAAGTCGCAAACTTGTTG
AAGCGAGTTTAGAGACTTTGTTGATTTGAATAAACGATACGAGTTTACTG
AATATATTAAG Run BLAST on NCBI transcript from alignment at scaffold_189:342361..343571- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050827 ID=TCONS_00050827|Name=TCONS_00050827|organism=Clytia hemisphaerica|type=transcript|length=1211bp|location=Sequence derived from alignment at scaffold_189:342361..343571- (Clytia hemisphaerica)
TTGAGTTTAAAAAGATTTCCTTCTGAGAAGTAAAAGGAGTAACTTCAGAA
CCTTTTAAAAACTTGTGATAGTTAAAGGAGCAATAAAGTGTACATGTTTT
TTTTCTATAAGCATAACGTTTATAAGCATATGACATGCTCAGTTTTAAAC
AGTGGCTCTGTTGTTTAAGAACAATAGAATGTTATGCATAATGCGAGCCT
GATGTAGGGGTACACGCTTTGCTTAATAAAAACAAACAAACATGTGCTCG
AATTTTTGGAGAAATTCGAGTTATGAGAGATTACCCAACATCTTAAAAAA
GTGTAAGATTTCTTTGGTCAATTAATTGAAACATATAGAATCTGCTAATA
TTTTTGTAAATGATACCCTCTTGAAGGCTTCAGAAAAGAAAGAAAATTAC
GAAATATCTCTGAAGAAAAAATGCCAAAACCACGAAACAAACAAGGAAAG
AAAACATTGAAGGAAATCAATGCGATCAGTGAACGTTTGTATAGTTCAAG
TAACGCCAATACAACACGATTAACTAAGAAGGAGATGCCTGGAAAAACTG
GTAAACATTTGAGTAAGGATGACATGAACTCCATGGTGGAAAGACTACAT
GAGTCTGACCCGAACGCTAAACGTAAAGAACTTGGTGAGAAACATAACAT
GAATTTTGATAAAGAACGTCCTGAGAATATGGGTTGGCAGAAGAAGGAAA
AGGAAGAGATTGACGCTGTGACGTCGCGGCTTTTTGTGGCCGATTATAAT
AACCGGAACGTAGGTAAACAAACGGTCCCCAAGGTAACAGATAAGGAGCT
AAGCAAAGAAGAGTTTGATGGTATGGTAGAGCGTTTATTTATAAGTGGAT
ACTCAAATCGAAATTTGGTTAAAAATCAACAATTTTATGATTTGATTATG
AATAAGAAAAAAGCTGAAGAGAAAACATTGAATAAAGAAGAAGTTGAAGA
GGCACTGGGTCGACTTTCGAAACAGACCCGTGAACCGGCTGAATGTAATA
AAGACATGCTTGGTAAACAAACTTATATTGCCAAAGGGATTTATGGAACT
CACGCAATAAATGGTGGGAATGAAAGATATATACCTAAAGATGGTAGTAG
TAATGGGACCACTAGTATTTAATTTGAATAAAGAAGTCGCAAACTTGTTG
AAGCGAGTTTAGAGACTTTGTTGATTTGAATAAACGATACGAGTTTACTG
AATATATTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050827-exon-scaffold_189-1575043694:342361..343571 | TCONS_00050827-exon-scaffold_189-1575043694:342361..343571 | Clytia hemisphaerica | exon |
| TCONS_00050827-exon-scaffold_189-1510915933:342361..343571 | TCONS_00050827-exon-scaffold_189-1510915933:342361..343571 | Clytia hemisphaerica | exon |
| TCONS_00050827-exon-scaffold_189-1491911889:342361..343571 | TCONS_00050827-exon-scaffold_189-1491911889:342361..343571 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_189 | supercontig | scaffold_189:342361..343571 - |
Blast
The following BLAST results are available for this feature:
|
