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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050860 ID=TCONS_00050860|Name=TCONS_00050860|organism=Clytia hemisphaerica|type=transcript|length=1102bp
AATTTATAGGTAGACTGGAAAAACCATTAGCAGAAAAATTAGGACGACCT
TTACAAAAATTACGAACAAAATTACGTGACGAGAAACGAAAACTTCTCGG
TATTGAAAAACTTGACGACGATGATAAATTATGCGATGATGTCGGCGACA
ATTAATCCTCTGGAAAAGGATTCAAGAACTAATGAATTGCACTAACTGAA
TCTGTTTCTTCAAACACTAATACATATTATCAACAATTCGAGTCTCCGTA
ATTCAAACATCTATAACTCGAACAGACTCCTTGACTCGAACAAGGTGTCT
TTAGTCCTTTAGGATAGCGTGAGGATCACATTGCATGAATAATTCAGAGA
AAGCTAAAATGTGATGCTCACGGAACCTTCAAACCAATAAGTCTCTGTAA
CTCGAATTTTCCATAATTTGAATTTCTATAAAGACTTAGCTCTATGAGAG
GAAACGGGTTCGAGTTTATCGCGAAATATTAAATGACGTCAAAAACAGTG
TCGGAATATTCTGACAAGCCCATTTCCATTTATCGAACATTTACAAGTTG
GAAAACTACTGCATTTTATGTAAAAAAGTAATTCGTAAATACTTCCATAA
TTTGAAAAAAGGGAATGGCGCAGATGATTGAGAAAACCATGTTTTGAACA
AGGCGGTCATTATTTAACGCCTTAAAGAACATgattttttacaagaacca
aaatttttatttaaattttttcgtGCTTATAGCATTTTGACAAATTAACA
AAGATAACCAACATCCgtatattatttttaaaatgaatatATAACGTAAC
ATTTTATACAGACtacgggtaacttgcatcagtggaggcaaacatgcata
accctcaaatgactgacctgtctggtcattaaaatacaaagttaaatcaa
aacaaaaatggtagagtagatctGCGAGCGGAgatgcgtagttcatttgt
tttgaaattgtgctgctttgattggtccgtcatttaagggctctggtcat
agtgaaaaatcaattttataatttgaagataaaaccttatgttttcgctt
ctttgacatgtttaagaacaaactgcttttgaaaaaaagaatttaagtaA
TA Run BLAST on NCBI transcript from alignment at scaffold_189:303487..304588 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050860 ID=TCONS_00050860|Name=TCONS_00050860|organism=Clytia hemisphaerica|type=transcript|length=1102bp|location=Sequence derived from alignment at scaffold_189:303487..304588 (Clytia hemisphaerica)
TATtacttaaattctttttttcaaaagcagtttgttcttaaacatgtcaa
agaagcgaaaacataaggttttatcttcaaattataaaattgatttttca
ctatgaccagagcccttaaatgacggaccaatcaaagcagcacaatttca
aaacaaatgaactacgcatcTCCGCTCGCagatctactctaccatttttg
ttttgatttaactttgtattttaatgaccagacaggtcagtcatttgagg
gttatgcatgtttgcctccactgatgcaagttacccgtaGTCTGTATAAA
ATGTTACGTTATatattcattttaaaaataatatacGGATGTTGGTTATC
TTTGTTAATTTGTCAAAATGCTATAAGCacgaaaaaatttaaataaaaat
tttggttcttgtaaaaaatcATGTTCTTTAAGGCGTTAAATAATGACCGC
CTTGTTCAAAACATGGTTTTCTCAATCATCTGCGCCATTCCCTTTTTTCA
AATTATGGAAGTATTTACGAATTACTTTTTTACATAAAATGCAGTAGTTT
TCCAACTTGTAAATGTTCGATAAATGGAAATGGGCTTGTCAGAATATTCC
GACACTGTTTTTGACGTCATTTAATATTTCGCGATAAACTCGAACCCGTT
TCCTCTCATAGAGCTAAGTCTTTATAGAAATTCAAATTATGGAAAATTCG
AGTTACAGAGACTTATTGGTTTGAAGGTTCCGTGAGCATCACATTTTAGC
TTTCTCTGAATTATTCATGCAATGTGATCCTCACGCTATCCTAAAGGACT
AAAGACACCTTGTTCGAGTCAAGGAGTCTGTTCGAGTTATAGATGTTTGA
ATTACGGAGACTCGAATTGTTGATAATATGTATTAGTGTTTGAAGAAACA
GATTCAGTTAGTGCAATTCATTAGTTCTTGAATCCTTTTCCAGAGGATTA
ATTGTCGCCGACATCATCGCATAATTTATCATCGTCGTCAAGTTTTTCAA
TACCGAGAAGTTTTCGTTTCTCGTCACGTAATTTTGTTCGTAATTTTTGT
AAAGGTCGTCCTAATTTTTCTGCTAATGGTTTTTCCAGTCTACCTATAAA
TT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050860-exon-scaffold_189-1491911889:303487..304588 | TCONS_00050860-exon-scaffold_189-1491911889:303487..304588 | Clytia hemisphaerica | exon |
| TCONS_00050860-exon-scaffold_189-1510915933:303487..304588 | TCONS_00050860-exon-scaffold_189-1510915933:303487..304588 | Clytia hemisphaerica | exon |
| TCONS_00050860-exon-scaffold_189-1575043694:303487..304588 | TCONS_00050860-exon-scaffold_189-1575043694:303487..304588 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_189 | supercontig | scaffold_189:303487..304588 . |
Blast
The following BLAST results are available for this feature:
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