TCONS_00050931 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050931
Unique NameTCONS_00050931
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1612

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050931 ID=TCONS_00050931|Name=TCONS_00050931|organism=Clytia hemisphaerica|type=transcript|length=1612bp
GCGAATAAAAGCTAACTTGGAGCATCTTAGCGAATTTTAACTGATTCGTT
TGACTTATAAATTTCGTCGTATGGAAGGATTGACTTTACAACTTGAGCCA
GGATAAGAGTGGTCATAACCCACGAGAGACAAAAATTTAAGCATCTAAAA
ACACTTGCAtggtattttatgaaatttttatcaCTTTTCGTTCGAATATT
TACCCTTTTATAGCTGATTGAGCGTTTGTTGTGGCTGCGAGCTTTCTTTC
AAATACGGCGATAAAtcaaaaaagcaagaaaaagagaGTCACATTAATGA
TTTGAAggttgctttgaaactttgtcACTTTGTTAAGTTTTGAGGCCTAT
CAAACAGAAGTGATCATCATGGCGGAAGAGGAGGGTCGAGTGAAAGCAAC
CTTTCTAACCAAATATCTCATCTCAATCACGGCAGCTGGTGCTGCAGAAA
CAACAACATATCCCCTCGACATCACTAAGACAAGACTTCAGGTACAAGGT
GAACATGCTTCACGGTCAGCTTCGACCGAGACACGTGCCTATCGTGGAAT
GGTGGGGACTGCTATTGGTATAGCGAAAGAAGAAGGATTCTTGAAATTAT
GGGAAGGTTTACCTCCAGCACTCGCCAGACACATCATTTACAGTGGATCG
CGAATGGTATTTTACGAACATCTTCGCAACAACGTTTTCAAGAGAAATGA
AGATGGCTCATTTGATTTATGGAAGGCGATAATAGCTTCAAGTGCTGCAG
GAGCTGCTGGTCAATTCCTTGCTTCACCAACAGATCTGGTCAAAGTCACC
ATGCAATATGAAGGGAAACGTATCCTTGATGGTCATCAGAAACGGTATAA
AGGAGCTACAGATGCGTTTCTGGTGTTATTAAAACAACGTGGTTTCATTG
GTATGTGGAAAGGATGGCTACCAAACGTACAGCGAGGTGCTTTGGTTAAC
TTAGGAGATGTTGTAACATATGATAAATCGAAACGCTTCTTTATGCTACA
CTTCAATACAGGTGATAGTATACTGACCCATAGTTTAGCAAGTGTATGTT
CCGGATTTGTTGCCTCATTGTTCAGTACacctgctgacgtcatcaaaaca
aggATTATGAGCAACCCCGATGCTTATAAAGGGGTCGTTGATTGTTTTAC
TCAAGCTgTCAGAAACGAAGGTTTTATGTCTCTGTATAAAGGCTTCATAC
CAACTTGGGCAAGATTGGCACCTTGGATCGTCATTTTTTGGCTGAGTAAT
GAACAAATTCGAAAAGGCATTGGTGTGGAAGGATTTTAATCAATCCTGAG
AGAATGCAAAAGCCCAGGAgatactagggttggcggatgaaGGTTATGTG
CGGACAGGACCTCCAAAAACTGActcttagagagaccaaatttttagTGA
GAAAGTGCCTATTAGCCTATTAGAGACACTTTTTTACAATTCTTCTCTCG
ATCGtgaattttccaacccttatCGTTGAAATTGCTTGGTAGGcctttca
aatttatttttcagcttCAGTTTAGATCTATTTTATGAAATTATAGTTTG
TAAATTTTTAGACGTTTGATAAGTATTTTGATTAGAATAATACATGCAAA
GTAATAGTTTCT
Run BLAST on NCBI

protein sequence of TCONS_00050931-protein

>TCONS_00050931-protein ID=TCONS_00050931-protein|Name=TCONS_00050931-protein|organism=Clytia hemisphaerica|type=polypeptide|length=306bp
MAEEEGRVKATFLTKYLISITAAGAAETTTYPLDITKTRLQVQGEHASRS
ASTETRAYRGMVGTAIGIAKEEGFLKLWEGLPPALARHIIYSGSRMVFYE
HLRNNVFKRNEDGSFDLWKAIIASSAAGAAGQFLASPTDLVKVTMQYEGK
RILDGHQKRYKGATDAFLVLLKQRGFIGMWKGWLPNVQRGALVNLGDVVT
YDKSKRFFMLHFNTGDSILTHSLASVCSGFVASLFSTPADVIKTRIMSNP
DAYKGVVDCFTQAVRNEGFMSLYKGFIPTWARLAPWIVIFWLSNEQIRKG
IGVEGF
Run BLAST on NCBI

transcript from alignment at scaffold_19:716958..726034-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050931 ID=TCONS_00050931|Name=TCONS_00050931|organism=Clytia hemisphaerica|type=transcript|length=9077bp|location=Sequence derived from alignment at scaffold_19:716958..726034- (Clytia hemisphaerica)
GCGAATAAAAGCTAACTTGGAGCATCTTAGCGAATTTTAACTGATTCGTT
TGACTTATAAATTTCGTCGTATGGAAGGATTGACTTTACAACTTGAGCCA
GGATAAGAGTGGTCATAACCCACGAGAGACAAAAATTTAAGCATCTAAAA
ACACTTGCATGGTATTTTATGAAATTTTTATCACTTTTCGTTCGAATATT
TACCCTTTTATAGCTGATTGAGCGTTTGTTGTGGCTGCGAGCTTTCTTTC
AAATACGGCGATAAATCAAAAAAGCAAGAAAAAGAGAGTCACATTAATGA
TTTGAAGGTTGCTTTGAAACTTTGTCACTTTGTTAAGTTTTGAGGCCTAT
CAAACAGAAGTGATCATCATGGCGGAAGAGGAGGGTCGAGTGAAAGCAAC
CTTTCTAACCAAATATCTCATCTCAATCACGGCAGCTGGTGCTGCAGAAA
CAAGTTAGTAAGTTTTTTTTTCAAAAATTTAAATTCGTTTGTTTAGATTT
ATTACAGAGCACATAATAATATTTTGATTCAAGGTGTAGTACAGCATGGT
TAACAATATATTCAGACAGAATTGGAAATAAGCAAAAAGTGGGAGGGTTC
AAACTAATATTATACCCTTAAAATTTCCATATTATCATATAAGACCCGTA
TTACTGTATTACAGGCATTGTAAACGACTCAAGGTATATTTAAGGAGCTT
TTCAAGTTTCTCCTATGTATTCTTCAAAAGTAATACCTCTTTGATTAGAT
GGGATATGACAAAACCTAAAGCATTAAGCGATGTTTGTAGCCCCTTGTGA
ACGTCCCTCTTATATCTTTTATATTTTTACTTGAAATACATCACAATGCT
GTCTTGAACACACCCGTCACCTCGCAAACCCAGTACCCCCTATTATCCTC
TGAAAAAGTCATCTTTGCATCAAACTATCTTTTAGCAACATATCCCCTCG
ACATCACTAAGACAAGACTTCAGGTACAAGGTGAACATGCTTCACGGTCA
GCTTCGACCGAGACACGTGCCTATCGTGGAATGGTGGGGACTGCTATTGG
TATAGGTAAGCATCTACTCTTTAAAAAGTATAATCAATCAATTCTTTTGC
AATTTATATTCTGTCTAGATACGAGTCATTCAAATAATAGTAAAAAATTG
GTTCTTGAACAAATCTTACTTTAAGTTGAACAACTGTATAGGGTCTCTAA
AACTAAATTAGAGTATCCGTAATTTGAGCCTATTTATCTCGAAGTTACTT
TGTCTATTTCGATGATTTTTTTCTTGTAAATTGAATTAGAATGGTTTAAA
ATGTCCACAAAAAATTTACATGTCAAATGACAAGCATCAATTCTCAGATG
CAACGTAACTAGCAACACTTTTCTTGGCAATTGCCACTCTCTCCAGTCAT
TTTAACCCAAGATTCTTCATCGTATAGCGAAAGAAGAAGGATTCTTGAAA
TTATGGGAAGGTTTACCTCCAGCACTCGCCAGACACATCAGTAAGTAGAT
AGACGTATATAAATATTCAACTCACTACATAGAATGGCTTGGATCTCAGT
TTATGGTCAAACAAATTCACAAGCTATATTTTTTTATTCGACATTCTATC
ATTTAATACACCCCTCATTCGATAAATTGAAAGTCACCGTCAACAAGAAT
CTCATGAACGATGCTCTACTATTTGATGCCCTCCCTCATTTGATGAAAAT
TCTATTCCTTCAAAAATCGAATTAGAGAGCGTCAACCGTATTTCACATTT
TCATTATTACGTCACTTTTTCATCTAACAACATCACTTGATATCCTCCCT
TTAAAACTCAATTTCTTTATAAATTTAGTTTACAGTGGATCGCGAATGGT
ATTTTACGAACATCTTCGCAACAACGTTTTCAAGAGAAATGAAGATGGCT
CATTTGATTTATGGTAACAGTTGTTTAGCACCTTCAACTTTATAATGGAA
CTTCCTATAGAAAATAGAAATGTGATAGAAGTACCCCATTTTAAGCAAAA
CGAATAAGTTTCTTATCCCAGAATGAATGACACAATACACGGGCTGAAAA
ATTACATCAATGCAGTCAAAACATGTGATTACTCGAAAAATTCCACGTGA
TTTTATTCCCATGTTACTTGCTTTACAACTTACAGCTGATATCTTTATTA
GTGTCAATAACTCCGAACCAAAGAAATAAATGTCATGTAACAAGCACATA
AAAATTTTGAGTAAAAACGTGATTTGTCTTCAAACTTTTTATTTTGCAAC
CTGTGTATTGATCTGATCAATACCAAAGTCGATATCTAATTAGTGGCTTC
TGAGGTTTGGAAGAGACGTGGAAGTCACAGACTGCCCTCAGACCACAGAC
TGCAAACCAGTCTCCAGTGTATAAATTCCACCCTTGAAAAAACCATCTGA
TAATATTACAAAATATGATAGGATCACTCACTTTCAATAAAAAAAGGTTA
AGTCAATCACTCCACATCATGGTGAATTTATCAGGTTTCAATGATATTTC
CCCAGCAGGTGTCAGTCCATATTTTAGACACAATGTAAAAACTGCATGAA
GTAGTTGATCAAAATCGACCAAAAAGTTCATTTCGATCTAGTCTTTTTCG
AGGCATAATTGATCGAAATGTAATCTTTGTTTTCTATATTTAGAGTTTTT
AGCATGGGCTTTTCCAGAAAAAAACCGTGCACCCCCTGTTGAGGAGGTCC
AACCTTTTCTGACCTACCCCCTTGGAATTCCAGGCAATTTTAGGATCATA
TCTCTCTGGAATTCTGAATTTTTACAAATTTTCAATCATTAACCCCTTGG
AATTCCATTTATTTTTGACGGATTTTCGTCTATCCTTATGAAATTCCACT
GCATTTCAAACCTTACCCCCTTGGAACGGAAATGGACCTCCTCAACAGGG
GGTATACGATTTTTTTCTGGAAAAGACCATTGTTAATAGACTTTTTAACT
GACTTTTCCCAATCTCCAGGAAGGCGATAATAGCTTCAAGTGCTGCAGGA
GCTGCTGGTCAATTCCTTGCTTCACCAACAGATCTGGTCAAAGTCACCAT
GCAATATGAAGGGAAACGTATCCTTGATGGTCATCAGAAACGGTAAGAAT
CTTTCCCTGTCTATCGATAACAATAGTGTGTATTGGACGATGAGAAGGAT
CTATGTATATATGGTGTTGCTTTTGTATATCTCTTAAAAATCTAGTTGCA
AGAGTTGTTGTTTGTCGATGTTGTTAGTTGATGTTGTGTTGCTTCCATGG
ATAAACTAATGGACACAGTTACAATAGTGTGTATATATGATCTCCGTGTC
TATACCTGAAAGGGTAAAATCTGCTCCAGAGGGAGAATTTAGCTCTTGAC
ATAGAGAAAGCGAACTGAAATATATAGAGATAGAGAGGCTCTCATCATGA
CAGTGAATGTCTAACCCCAATCGGTTTACGTGTTTTCTCTATTAATCTCT
ACCTAGACTATGCTATAGTCTGAGACAAATCACTATCTAACAATTAAGCC
CAAAGCTGAAGAAAATTCGCAAACGGGCTTTTTTGGCGAAAAGACTTTAC
AGCTGGTAGAGTTTGCCAGTTCTTCGAAACTCTCCCGCCGATTTTTTTCC
GTATACCACCATAACACCATACCACCATAATCTTTCACCTTTACTATCAC
TGTAATGGACGATAACATCGTGTAATCTCTACCCATCAATTTTCATTTAA
TTTCAATAACTGTAAACCCTCGTGGGATACTGCGTTTGGATGAATTATGT
AAAATTTGTTCCGTATTTTCCAGACACACTTTATTTATAGCTGTTACAAA
AAGCAAATTCGCTTTGAGTCTTCCCTCTTTGTTGTGGAAACCATGCCAAC
GTTATTATGGTAAATTGCATGAGAGTGGTTTCCACATGGCTATGATGAGA
CACTTGATAATAATATCTCACTCCTGTGTTTTGGAAACTTTTAGGTATAA
AGGAGCTACAGATGCGTTTCTGGTGTTATTAAAACAACGTGGTTTCATTG
GTATGTGGAAAGGATGGCTACCAAACGTACAGCGAGGTGCTTTGGTTAAC
TTAGGAGGTGAGGATACTGGCACACAACGTTGTTTCAACGTTTATTTAAC
GTTCCCAACGTCCATATAACGTTAGATGAACGTTGAAACAACGTTGTGTG
CCAGCTGGTTGAGGATGCTTAAATAGAGAGTTCTGGGTATTAAGTCGGGA
TATATATTAGCCGTTTCTTGAATTTTCAAGTTCTGGTGAGAGTGCCAAAA
TCAGCCTTTCCACTTTATTTCATTGGCTTTTTTTTCGGTTATCGAGGGTT
TGGCTATCCAATTATCATGTAGATTTAAGGTATATTTACTCTTAGATTTC
TTTTTGAAGTGAAAACTTGTTAATGACTTTTGACTTTGCTGCTGCTTTAT
AGAATCAGGGGGAACATTGAACTAGATGAAAAACAGGGAACGCGTTGCTG
GAATTGGGACATATCTTTTTAGCAAAATTTTATAACAGCCATTACACGCT
TTTTTATAAGAATGATGTAAATCCATTTCATCATGGATATTTTAAACTTT
TTTGGGAAAATCATCCTAAAATATTCTTACAGCTTTCTTTCCGGTTAGGA
AAGGTAACTAGGTTAGGATCCTATTTCAGACTAGATTCAACATTTAGTCC
ATACGTCTCAAGCATAAAATGCTGTAAAATGGAGTGAGCCTTACTTTGGG
CTAATTGGCAATATAATAAAAAATGACATTCTTAGCAATTAGTAGCCAAA
TTCCATGATGGTGATATTCTTAGCATTATTCTTAAATTTTTGGCCATTTT
CATCATGGACATTCTTATAAAGTGTATTCTTATAAAAAAAAACGTGTATC
GAATTTGGACCAGGATAGAGGAAATTTTGACCCTATCTGATAAAGAAATG
GAACCATGACCAGCGACACTGCCCCGTATCCTCCCACTGAAAGGTTAATT
TCTGCACGAAAAACCCTTTGCATCATCGGTGACCCTCTTAGGGGGTATTT
CTTCTCGAAAAAAATACAATGTCATATAAGAACTTTCTTTTCTCTTTATT
ACACAGATGTTGTAACATATGATAAATCGAAACGCTTCTTTATGCTACAC
TTCAATACAGGTGATAGTATACTGACCCATAGTTTAGCAAGGTAAATTGT
AATTCTTTTTTCATATATGGTAGATTCACTATTTTAGCCAGGGGATGAAG
TGTTGAATGAAGTGTTTTCTTATGGGTTTGTCCCAAGGGGTACTAACTTT
GCGAGGGGACGGGTATGAGAGACAAAACTTTGGTGATTTTGGGATCCTTT
GAGAGACTTTTTCCTAAATTTTGGTCAATTTTTTCCAAATTTTGGTTTGA
TTTTCACCAAATCTTGGTCAAAACTTTTGGAAATCGTGACCCTTTAAGAG
AGAAATTTTTGATTTTCGTGATTTTGGGACCCTTTTGAGACTAACTTTTG
AATTTGTACTCCTTTGAGAGACTTTTGAGGAATGAGAAAAGGTACCCTTA
TGGCTCGCACATACCCGGCACCCATTTTGCCTAAGCACCCCCTGGGGGTT
TGTGTACTGATCTTTAACTACTTGACTGGATCGAGCTCTCAATATAAAAG
GAAGCGTATTCTTTCTAGGGCTGACTAGCCACCATCTTGTTAATTCTGGT
TAACAGTGCGATACGAATATTTTGAAATTCTGACGTTCGAAAATTCAAGG
TGAATTAGAAAAGAAAACAGCATGGTGGTCTAGTCAATTTCAAAACTGTT
GGAAGTTATACCTCGTTGGAAAGATAATTTCGAACCACTTGATTTAGAAC
TTCCTTTTCTTGAAATTGAAGATGAAAATGAAAAAATCTTCTTTTTTCCT
TCTAAATTTTCCATCTACATTTTCAAATTCTTAGGAATTCTAATAAAATT
AAATTAAACCGCACAAAATTATCGTTCTACCGGAGCAGTTTTAAAATTAT
GGACCAGTAACTGTTTGGAGCGGACTCTAGTATACTGCACTTTAATAGAC
TACAGTATATTTTTGGCTTACATTTCATTTTTTGATAATTTTTTATGACG
CCGAGTCCAATGAAGAAGGCTAGGAGCATTTGACAAGTTCACCATTTCGA
AAGAAAACACTAAAATTCCAAATAACAAAGAAACTACTTGGAGTGTTGAA
AAATATAATATCCTATTTTTGACTATCAAAAGCAACTAAAATCTTGCGGA
CTATTTTACAGTAAATAACATATTACCATATATTACCGGGCCATTTAATT
GCACCATCCATTCTATAAAAAAAGCTTTAAGAGGACCCCGGGCTAGCACT
TTAATAGCACTCTATTTTTGGGTATCTTGGAGATCTTTCTCTATAGATAT
ATAGATGGATAGATATGCCCTCCGATGCATCAGAATGGGTACTAATCACG
ATATAGTAGGAATCACAGCGCAATCAGACTTTGCAACCCTGCAGATGTGA
GCTGACGAGCCATGACGTATACTATGACACTCGAACTACACGGGAGAATG
GATGTCCTCGCAGGTGTAGAACCGCCTAAGTGTCTCAGCACACCATAATG
TCTGGAATATCTACCCATAATCTTGCATCAGAGTTATGGTACACAATTCC
CCTCACATGGCATGGGTTGACCCGGGCGAAATCGCATTCACTTGCCATGT
GAATCGTAGTGTCTCGGTGAGTATCGAACTCGGGCCTCCTGGACATAAGT
CAAGCACGACAACCATTATACCACTACGCCTTTCTTTCTCTATACAACAG
TGTATGTTCCGGATTTGTTGCCTCATTGTTCAGTACACCTGCTGACGTCA
TCAAAACAAGGATTATGAGCAACCCCGATGCTTATAAAGGGGTCGTTGAT
TGTTTTACTCAAGCTGTAAGTGAAGATACATGTTTTTTTATATGCATAAC
CTTTATAAGCATACAGAGACCTGAATTCGGTGAAAGGATAAGCATATCAT
TAGTATACCAGTGAGAGCTTGGTCATTGTTCTGGGTTATGTACTTGTGAA
GGTTAATTTTTCTTTTCAATTTTAAATAAGCCATTTTTTTTTTTCAGAAA
AGTAAACATATCGCAAGCTTGACTCTTGAAATATAGCTTAAGCATAACTG
AGGCTGTTTTCCAAAAATTATGCTTATAAAAACTCCAAACGCACGGTCTT
AGAAAAATATATCTGTGATAGGGCTCTAAATTCCATTCCCCTCAACTCTT
TTTAGCTCACACATTGCCGAAATTCTCTCAAATTATGTTTAATGCAAAGT
ATTTCCTATTAACGCATTCACGCAGCTTTTTTGAAATTTTCACGTATATT
CACGCAAGTGAAAAATACCATTCACGTATTCACGTGAAACGCTGGAATCA
CTCTCTATAGTTATAGCATAGACTCTTACTAGTAACGAGTTTTATGTATC
CTGCGTTTTCTTAGCCAAACTCGGTATAAATTCATGTTAAATCATGACTG
ACTGAGGAAGACCAAAAGTCAGCAGGCTGTGTGTCAAACTGCAGGTTTTT
CCCAATCGTTTCAGTCACTTCAAAGAGTAGGCACATGAACTCGCTTCCAC
TATGGTCTACCGTTGATCGAAACTTTTTTATCAAACTTAAACTTTTTTAG
TCTTTTTCTATGTTTTAGGTCAGAAACGAAGGTTTTATGTCTCTGTATAA
AGGCTTCATACCAACTTGGGCAAGATTGGTACGTGATTTTCATACATTAA
GTCAATTTTTACAAATATCTACCCGGCTATTTATCGTTCTCAGTTCCCAC
ACGGGAGACCAGAGTTCGATTCCCACTCTTGTACTGATTTTCCCTTGGCA
AGTGAATGTACCTTCACCCGGGTCAACACAACCCATGTCTGCGGGGAATT
AGGTACCGCACTATAAAACAATAATGTATGGAGAGATATGCCTAGCTCTG
TAGGCTGTAAGAGGTTGCCAATACTTATCAGGTTTGTCCATGCGAGGATG
CACTGTAGTCTTCGTCCATGCAAGGATGTACTCCCGAACTTTGCTTAAGG
TATGAGAAATTGAGGTTAGACTTACATCCTAAGGAATACCGTTTAGAATA
TTTTCGGGGTTTGATTTCCATTCGGTACTGTGATTCACTTGTAAAAGTGA
ATGTACTTTTGCTCGGGTTAACCCAAACTATGTGAGGGGGGTTGGTGTAT
ACAAGAGATTATATCTTGGGTAGTAAAGTTGCGAGAACTCTTTGTTGTGT
TGTCAGAACACGGTCAACGGTGTCTGGCAGGCACTATATTGTCCCATTCT
AGAATATAGGTAATTATCTCGGGATAGGGCAAATACCGTCGACAAGATCA
CCCCCTTCAATTTGATCACGTACGTACCCCATTCTACTAAATCGTTGTCA
TATTATTTGAAAAAAATATCTGAATTTTCAACAAAGTTGTAGTGCTGTAA
CTTAATTACGAAGGAGCCTAGGGATTCCAAAATGTAAGAACATACCCCAC
CCTCCCAAATCGAAATATCCAATAAAATAAAATTTCCATTTAGAAATTTG
CATCCTCGTCTTCTCGTCGGGACTTTCAAATTCTCAAAAATGACAACATA
CCCCGAAATCCAAATAAATTTTTATCAAGGTTGTAGTAGATAAACCACCA
CATTCTAAAACATATTTTTTGGTACTTCTAATTTAACCGAATTATTTAAC
GTATATTATGATCGATGTTTTTCTTATTTCAGGCACCTTGGATCGTCATT
TTTTGGCTGAGTAATGAACAAATTCGAAAAGGCATTGGTGTGGAAGGATT
TTAATCAATCCTGAGAGAATGCAAAAGCCCAGGAGATACTAGGGTTGGCG
GATGAAGGTTATGTGCGGACAGGACCTCCAAAAACTGACTCTTAGAGAGA
CCAAATTTTTAGTGAGAAAGTGCCTATTAGCCTATTAGAGACACTTTTTT
ACAATTCTTCTCTCGATCGTGAATTTTCCAACCCTTATCGTTGAAATTGC
TTGGTAGGCCTTTCAAATTTATTTTTCAGCTTCAGTTTAGATCTATTTTA
TGAAATTATAGTTTGTAAATTTTTAGACGTTTGATAAGTATTTTGATTAG
AATAATACATGCAAAGTAATAGTTTCT

Coding sequence (CDS) from alignment at scaffold_19:716958..726034-

>TCONS_00050931 ID=TCONS_00050931|Name=TCONS_00050931|organism=Clytia hemisphaerica|type=CDS|length=9210bp|location=Sequence derived from alignment at scaffold_19:716958..726034- (Clytia hemisphaerica)
GCACCTTGGATCGTCATTTTTTGGCTGAGTAATGAACAAATTCGAAAAGG
CATTGGTGTGGAAGGATTTTAAGTCAGAAACGAAGGTTTTATGTCTCTGT
ATAAAGGCTTCATACCAACTTGGGCAAGATTGTGTATGTTCCGGATTTGT
TGCCTCATTGTTCAGTACACCTGCTGACGTCATCAAAACAAGGATTATGA
GCAACCCCGATGCTTATAAAGGGGTCGTTGATTGTTTTACTCAAGCTATG
TTGTAACATATGATAAATCGAAACGCTTCTTTATGCTACACTTCAATACA
GGTGATAGTATACTGACCCATAGTTTAGCAAGGTATAAAGGAGCTACAGA
TGCGTTTCTGGTGTTATTAAAACAACGTGGTTTCATTGGTATGTGGAAAG
GATGGCTACCAAACGTACAGCGAGGTGCTTTGGTTAACTTAGGAGGAAGG
CGATAATAGCTTCAAGTGCTGCAGGAGCTGCTGGTCAATTCCTTGCTTCA
CCAACAGATCTGGTCAAAGTCACCATGCAATATGAAGGGAAACGTATCCT
TGATGGTCATCAGAAACGTTTACAGTGGATCGCGAATGGTATTTTACGAA
CATCTTCGCAACAACGTTTTCAAGAGAAATGAAGATGGCTCATTTGATTT
ATGCGAAAGAAGAAGGATTCTTGAAATTATGGGAAGGTTTACCTCCAGCA
CTCGCCAGACACATCACAACATATCCCCTCGACATCACTAAGACAAGACT
TCAGGTACAAGGTGAACATGCTTCACGGTCAGCTTCGACCGAGACACGTG
CCTATCGTGGAATGGTGGGGACTGCTATTGGTATAGATGGCGGAAGAGGA
GGGTCGAGTGAAAGCAACCTTTCTAACCAAATATCTCATCTCAATCACGG
CAGCTGGTGCTGCAGAAACAAGCACCTTGGATCGTCATTTTTTGGCTGAG
TAATGAACAAATTCGAAAAGGCATTGGTGTGGAAGGATTTTAAGTCAGAA
ACGAAGGTTTTATGTCTCTGTATAAAGGCTTCATACCAACTTGGGCAAGA
TTGTGTATGTTCCGGATTTGTTGCCTCATTGTTCAGTACACCTGCTGACG
TCATCAAAACAAGGATTATGAGCAACCCCGATGCTTATAAAGGGGTCGTT
GATTGTTTTACTCAAGCTATGTTGTAACATATGATAAATCGAAACGCTTC
TTTATGCTACACTTCAATACAGGTGATAGTATACTGACCCATAGTTTAGC
AAGGTATAAAGGAGCTACAGATGCGTTTCTGGTGTTATTAAAACAACGTG
GTTTCATTGGTATGTGGAAAGGATGGCTACCAAACGTACAGCGAGGTGCT
TTGGTTAACTTAGGAGGAAGGCGATAATAGCTTCAAGTGCTGCAGGAGCT
GCTGGTCAATTCCTTGCTTCACCAACAGATCTGGTCAAAGTCACCATGCA
ATATGAAGGGAAACGTATCCTTGATGGTCATCAGAAACGTTTACAGTGGA
TCGCGAATGGTATTTTACGAACATCTTCGCAACAACGTTTTCAAGAGAAA
TGAAGATGGCTCATTTGATTTATGCGAAAGAAGAAGGATTCTTGAAATTA
TGGGAAGGTTTACCTCCAGCACTCGCCAGACACATCACAACATATCCCCT
CGACATCACTAAGACAAGACTTCAGGTACAAGGTGAACATGCTTCACGGT
CAGCTTCGACCGAGACACGTGCCTATCGTGGAATGGTGGGGACTGCTATT
GGTATAGATGGCGGAAGAGGAGGGTCGAGTGAAAGCAACCTTTCTAACCA
AATATCTCATCTCAATCACGGCAGCTGGTGCTGCAGAAACAAGCACCTTG
GATCGTCATTTTTTGGCTGAGTAATGAACAAATTCGAAAAGGCATTGGTG
TGGAAGGATTTTAAGTCAGAAACGAAGGTTTTATGTCTCTGTATAAAGGC
TTCATACCAACTTGGGCAAGATTGTGTATGTTCCGGATTTGTTGCCTCAT
TGTTCAGTACACCTGCTGACGTCATCAAAACAAGGATTATGAGCAACCCC
GATGCTTATAAAGGGGTCGTTGATTGTTTTACTCAAGCTATGTTGTAACA
TATGATAAATCGAAACGCTTCTTTATGCTACACTTCAATACAGGTGATAG
TATACTGACCCATAGTTTAGCAAGGTATAAAGGAGCTACAGATGCGTTTC
TGGTGTTATTAAAACAACGTGGTTTCATTGGTATGTGGAAAGGATGGCTA
CCAAACGTACAGCGAGGTGCTTTGGTTAACTTAGGAGGAAGGCGATAATA
GCTTCAAGTGCTGCAGGAGCTGCTGGTCAATTCCTTGCTTCACCAACAGA
TCTGGTCAAAGTCACCATGCAATATGAAGGGAAACGTATCCTTGATGGTC
ATCAGAAACGTTTACAGTGGATCGCGAATGGTATTTTACGAACATCTTCG
CAACAACGTTTTCAAGAGAAATGAAGATGGCTCATTTGATTTATGCGAAA
GAAGAAGGATTCTTGAAATTATGGGAAGGTTTACCTCCAGCACTCGCCAG
ACACATCACAACATATCCCCTCGACATCACTAAGACAAGACTTCAGGTAC
AAGGTGAACATGCTTCACGGTCAGCTTCGACCGAGACACGTGCCTATCGT
GGAATGGTGGGGACTGCTATTGGTATAGATGGCGGAAGAGGAGGGTCGAG
TGAAAGCAACCTTTCTAACCAAATATCTCATCTCAATCACGGCAGCTGGT
GCTGCAGAAACAAGCACCTTGGATCGTCATTTTTTGGCTGAGTAATGAAC
AAATTCGAAAAGGCATTGGTGTGGAAGGATTTTAAGTCAGAAACGAAGGT
TTTATGTCTCTGTATAAAGGCTTCATACCAACTTGGGCAAGATTGTGTAT
GTTCCGGATTTGTTGCCTCATTGTTCAGTACACCTGCTGACGTCATCAAA
ACAAGGATTATGAGCAACCCCGATGCTTATAAAGGGGTCGTTGATTGTTT
TACTCAAGCTATGTTGTAACATATGATAAATCGAAACGCTTCTTTATGCT
ACACTTCAATACAGGTGATAGTATACTGACCCATAGTTTAGCAAGGTATA
AAGGAGCTACAGATGCGTTTCTGGTGTTATTAAAACAACGTGGTTTCATT
GGTATGTGGAAAGGATGGCTACCAAACGTACAGCGAGGTGCTTTGGTTAA
CTTAGGAGGAAGGCGATAATAGCTTCAAGTGCTGCAGGAGCTGCTGGTCA
ATTCCTTGCTTCACCAACAGATCTGGTCAAAGTCACCATGCAATATGAAG
GGAAACGTATCCTTGATGGTCATCAGAAACGTTTACAGTGGATCGCGAAT
GGTATTTTACGAACATCTTCGCAACAACGTTTTCAAGAGAAATGAAGATG
GCTCATTTGATTTATGCGAAAGAAGAAGGATTCTTGAAATTATGGGAAGG
TTTACCTCCAGCACTCGCCAGACACATCACAACATATCCCCTCGACATCA
CTAAGACAAGACTTCAGGTACAAGGTGAACATGCTTCACGGTCAGCTTCG
ACCGAGACACGTGCCTATCGTGGAATGGTGGGGACTGCTATTGGTATAGA
TGGCGGAAGAGGAGGGTCGAGTGAAAGCAACCTTTCTAACCAAATATCTC
ATCTCAATCACGGCAGCTGGTGCTGCAGAAACAAGCACCTTGGATCGTCA
TTTTTTGGCTGAGTAATGAACAAATTCGAAAAGGCATTGGTGTGGAAGGA
TTTTAAGTCAGAAACGAAGGTTTTATGTCTCTGTATAAAGGCTTCATACC
AACTTGGGCAAGATTGTGTATGTTCCGGATTTGTTGCCTCATTGTTCAGT
ACACCTGCTGACGTCATCAAAACAAGGATTATGAGCAACCCCGATGCTTA
TAAAGGGGTCGTTGATTGTTTTACTCAAGCTATGTTGTAACATATGATAA
ATCGAAACGCTTCTTTATGCTACACTTCAATACAGGTGATAGTATACTGA
CCCATAGTTTAGCAAGGTATAAAGGAGCTACAGATGCGTTTCTGGTGTTA
TTAAAACAACGTGGTTTCATTGGTATGTGGAAAGGATGGCTACCAAACGT
ACAGCGAGGTGCTTTGGTTAACTTAGGAGGAAGGCGATAATAGCTTCAAG
TGCTGCAGGAGCTGCTGGTCAATTCCTTGCTTCACCAACAGATCTGGTCA
AAGTCACCATGCAATATGAAGGGAAACGTATCCTTGATGGTCATCAGAAA
CGTTTACAGTGGATCGCGAATGGTATTTTACGAACATCTTCGCAACAACG
TTTTCAAGAGAAATGAAGATGGCTCATTTGATTTATGCGAAAGAAGAAGG
ATTCTTGAAATTATGGGAAGGTTTACCTCCAGCACTCGCCAGACACATCA
CAACATATCCCCTCGACATCACTAAGACAAGACTTCAGGTACAAGGTGAA
CATGCTTCACGGTCAGCTTCGACCGAGACACGTGCCTATCGTGGAATGGT
GGGGACTGCTATTGGTATAGATGGCGGAAGAGGAGGGTCGAGTGAAAGCA
ACCTTTCTAACCAAATATCTCATCTCAATCACGGCAGCTGGTGCTGCAGA
AACAAGCACCTTGGATCGTCATTTTTTGGCTGAGTAATGAACAAATTCGA
AAAGGCATTGGTGTGGAAGGATTTTAAGTCAGAAACGAAGGTTTTATGTC
TCTGTATAAAGGCTTCATACCAACTTGGGCAAGATTGTGTATGTTCCGGA
TTTGTTGCCTCATTGTTCAGTACACCTGCTGACGTCATCAAAACAAGGAT
TATGAGCAACCCCGATGCTTATAAAGGGGTCGTTGATTGTTTTACTCAAG
CTATGTTGTAACATATGATAAATCGAAACGCTTCTTTATGCTACACTTCA
ATACAGGTGATAGTATACTGACCCATAGTTTAGCAAGGTATAAAGGAGCT
ACAGATGCGTTTCTGGTGTTATTAAAACAACGTGGTTTCATTGGTATGTG
GAAAGGATGGCTACCAAACGTACAGCGAGGTGCTTTGGTTAACTTAGGAG
GAAGGCGATAATAGCTTCAAGTGCTGCAGGAGCTGCTGGTCAATTCCTTG
CTTCACCAACAGATCTGGTCAAAGTCACCATGCAATATGAAGGGAAACGT
ATCCTTGATGGTCATCAGAAACGTTTACAGTGGATCGCGAATGGTATTTT
ACGAACATCTTCGCAACAACGTTTTCAAGAGAAATGAAGATGGCTCATTT
GATTTATGCGAAAGAAGAAGGATTCTTGAAATTATGGGAAGGTTTACCTC
CAGCACTCGCCAGACACATCACAACATATCCCCTCGACATCACTAAGACA
AGACTTCAGGTACAAGGTGAACATGCTTCACGGTCAGCTTCGACCGAGAC
ACGTGCCTATCGTGGAATGGTGGGGACTGCTATTGGTATAGATGGCGGAA
GAGGAGGGTCGAGTGAAAGCAACCTTTCTAACCAAATATCTCATCTCAAT
CACGGCAGCTGGTGCTGCAGAAACAAGCACCTTGGATCGTCATTTTTTGG
CTGAGTAATGAACAAATTCGAAAAGGCATTGGTGTGGAAGGATTTTAAGT
CAGAAACGAAGGTTTTATGTCTCTGTATAAAGGCTTCATACCAACTTGGG
CAAGATTGTGTATGTTCCGGATTTGTTGCCTCATTGTTCAGTACACCTGC
TGACGTCATCAAAACAAGGATTATGAGCAACCCCGATGCTTATAAAGGGG
TCGTTGATTGTTTTACTCAAGCTATGTTGTAACATATGATAAATCGAAAC
GCTTCTTTATGCTACACTTCAATACAGGTGATAGTATACTGACCCATAGT
TTAGCAAGGTATAAAGGAGCTACAGATGCGTTTCTGGTGTTATTAAAACA
ACGTGGTTTCATTGGTATGTGGAAAGGATGGCTACCAAACGTACAGCGAG
GTGCTTTGGTTAACTTAGGAGGAAGGCGATAATAGCTTCAAGTGCTGCAG
GAGCTGCTGGTCAATTCCTTGCTTCACCAACAGATCTGGTCAAAGTCACC
ATGCAATATGAAGGGAAACGTATCCTTGATGGTCATCAGAAACGTTTACA
GTGGATCGCGAATGGTATTTTACGAACATCTTCGCAACAACGTTTTCAAG
AGAAATGAAGATGGCTCATTTGATTTATGCGAAAGAAGAAGGATTCTTGA
AATTATGGGAAGGTTTACCTCCAGCACTCGCCAGACACATCACAACATAT
CCCCTCGACATCACTAAGACAAGACTTCAGGTACAAGGTGAACATGCTTC
ACGGTCAGCTTCGACCGAGACACGTGCCTATCGTGGAATGGTGGGGACTG
CTATTGGTATAGATGGCGGAAGAGGAGGGTCGAGTGAAAGCAACCTTTCT
AACCAAATATCTCATCTCAATCACGGCAGCTGGTGCTGCAGAAACAAGCA
CCTTGGATCGTCATTTTTTGGCTGAGTAATGAACAAATTCGAAAAGGCAT
TGGTGTGGAAGGATTTTAAGTCAGAAACGAAGGTTTTATGTCTCTGTATA
AAGGCTTCATACCAACTTGGGCAAGATTGTGTATGTTCCGGATTTGTTGC
CTCATTGTTCAGTACACCTGCTGACGTCATCAAAACAAGGATTATGAGCA
ACCCCGATGCTTATAAAGGGGTCGTTGATTGTTTTACTCAAGCTATGTTG
TAACATATGATAAATCGAAACGCTTCTTTATGCTACACTTCAATACAGGT
GATAGTATACTGACCCATAGTTTAGCAAGGTATAAAGGAGCTACAGATGC
GTTTCTGGTGTTATTAAAACAACGTGGTTTCATTGGTATGTGGAAAGGAT
GGCTACCAAACGTACAGCGAGGTGCTTTGGTTAACTTAGGAGGAAGGCGA
TAATAGCTTCAAGTGCTGCAGGAGCTGCTGGTCAATTCCTTGCTTCACCA
ACAGATCTGGTCAAAGTCACCATGCAATATGAAGGGAAACGTATCCTTGA
TGGTCATCAGAAACGTTTACAGTGGATCGCGAATGGTATTTTACGAACAT
CTTCGCAACAACGTTTTCAAGAGAAATGAAGATGGCTCATTTGATTTATG
CGAAAGAAGAAGGATTCTTGAAATTATGGGAAGGTTTACCTCCAGCACTC
GCCAGACACATCACAACATATCCCCTCGACATCACTAAGACAAGACTTCA
GGTACAAGGTGAACATGCTTCACGGTCAGCTTCGACCGAGACACGTGCCT
ATCGTGGAATGGTGGGGACTGCTATTGGTATAGATGGCGGAAGAGGAGGG
TCGAGTGAAAGCAACCTTTCTAACCAAATATCTCATCTCAATCACGGCAG
CTGGTGCTGCAGAAACAAGCACCTTGGATCGTCATTTTTTGGCTGAGTAA
TGAACAAATTCGAAAAGGCATTGGTGTGGAAGGATTTTAAGTCAGAAACG
AAGGTTTTATGTCTCTGTATAAAGGCTTCATACCAACTTGGGCAAGATTG
TGTATGTTCCGGATTTGTTGCCTCATTGTTCAGTACACCTGCTGACGTCA
TCAAAACAAGGATTATGAGCAACCCCGATGCTTATAAAGGGGTCGTTGAT
TGTTTTACTCAAGCTATGTTGTAACATATGATAAATCGAAACGCTTCTTT
ATGCTACACTTCAATACAGGTGATAGTATACTGACCCATAGTTTAGCAAG
GTATAAAGGAGCTACAGATGCGTTTCTGGTGTTATTAAAACAACGTGGTT
TCATTGGTATGTGGAAAGGATGGCTACCAAACGTACAGCGAGGTGCTTTG
GTTAACTTAGGAGGAAGGCGATAATAGCTTCAAGTGCTGCAGGAGCTGCT
GGTCAATTCCTTGCTTCACCAACAGATCTGGTCAAAGTCACCATGCAATA
TGAAGGGAAACGTATCCTTGATGGTCATCAGAAACGTTTACAGTGGATCG
CGAATGGTATTTTACGAACATCTTCGCAACAACGTTTTCAAGAGAAATGA
AGATGGCTCATTTGATTTATGCGAAAGAAGAAGGATTCTTGAAATTATGG
GAAGGTTTACCTCCAGCACTCGCCAGACACATCACAACATATCCCCTCGA
CATCACTAAGACAAGACTTCAGGTACAAGGTGAACATGCTTCACGGTCAG
CTTCGACCGAGACACGTGCCTATCGTGGAATGGTGGGGACTGCTATTGGT
ATAGATGGCGGAAGAGGAGGGTCGAGTGAAAGCAACCTTTCTAACCAAAT
ATCTCATCTCAATCACGGCAGCTGGTGCTGCAGAAACAAGCACCTTGGAT
CGTCATTTTTTGGCTGAGTAATGAACAAATTCGAAAAGGCATTGGTGTGG
AAGGATTTTAAGTCAGAAACGAAGGTTTTATGTCTCTGTATAAAGGCTTC
ATACCAACTTGGGCAAGATTGTGTATGTTCCGGATTTGTTGCCTCATTGT
TCAGTACACCTGCTGACGTCATCAAAACAAGGATTATGAGCAACCCCGAT
GCTTATAAAGGGGTCGTTGATTGTTTTACTCAAGCTATGTTGTAACATAT
GATAAATCGAAACGCTTCTTTATGCTACACTTCAATACAGGTGATAGTAT
ACTGACCCATAGTTTAGCAAGGTATAAAGGAGCTACAGATGCGTTTCTGG
TGTTATTAAAACAACGTGGTTTCATTGGTATGTGGAAAGGATGGCTACCA
AACGTACAGCGAGGTGCTTTGGTTAACTTAGGAGGAAGGCGATAATAGCT
TCAAGTGCTGCAGGAGCTGCTGGTCAATTCCTTGCTTCACCAACAGATCT
GGTCAAAGTCACCATGCAATATGAAGGGAAACGTATCCTTGATGGTCATC
AGAAACGTTTACAGTGGATCGCGAATGGTATTTTACGAACATCTTCGCAA
CAACGTTTTCAAGAGAAATGAAGATGGCTCATTTGATTTATGCGAAAGAA
GAAGGATTCTTGAAATTATGGGAAGGTTTACCTCCAGCACTCGCCAGACA
CATCACAACATATCCCCTCGACATCACTAAGACAAGACTTCAGGTACAAG
GTGAACATGCTTCACGGTCAGCTTCGACCGAGACACGTGCCTATCGTGGA
ATGGTGGGGACTGCTATTGGTATAGATGGCGGAAGAGGAGGGTCGAGTGA
AAGCAACCTTTCTAACCAAATATCTCATCTCAATCACGGCAGCTGGTGCT
GCAGAAACAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032273XLOC_032273Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050931-proteinTCONS_00050931-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050931-exon-scaffold_19-1575043694:725582..726034TCONS_00050931-exon-scaffold_19-1575043694:725582..726034Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1575043694:724980..725099TCONS_00050931-exon-scaffold_19-1575043694:724980..725099Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1575043694:724545..724607TCONS_00050931-exon-scaffold_19-1575043694:724545..724607Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1575043694:724122..724206TCONS_00050931-exon-scaffold_19-1575043694:724122..724206Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1575043694:722943..723065TCONS_00050931-exon-scaffold_19-1575043694:722943..723065Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1575043694:721978..722090TCONS_00050931-exon-scaffold_19-1575043694:721978..722090Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1575043694:720894..720978TCONS_00050931-exon-scaffold_19-1575043694:720894..720978Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1575043694:719170..719284TCONS_00050931-exon-scaffold_19-1575043694:719170..719284Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1575043694:718357..718416TCONS_00050931-exon-scaffold_19-1575043694:718357..718416Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1575043694:716958..717352TCONS_00050931-exon-scaffold_19-1575043694:716958..717352Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1510915933:725582..726034TCONS_00050931-exon-scaffold_19-1510915933:725582..726034Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1510915933:724980..725099TCONS_00050931-exon-scaffold_19-1510915933:724980..725099Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1510915933:724545..724607TCONS_00050931-exon-scaffold_19-1510915933:724545..724607Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1510915933:724122..724206TCONS_00050931-exon-scaffold_19-1510915933:724122..724206Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1510915933:722943..723065TCONS_00050931-exon-scaffold_19-1510915933:722943..723065Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1510915933:721978..722090TCONS_00050931-exon-scaffold_19-1510915933:721978..722090Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1510915933:720894..720978TCONS_00050931-exon-scaffold_19-1510915933:720894..720978Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1510915933:719170..719284TCONS_00050931-exon-scaffold_19-1510915933:719170..719284Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1510915933:718357..718416TCONS_00050931-exon-scaffold_19-1510915933:718357..718416Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1510915933:716958..717352TCONS_00050931-exon-scaffold_19-1510915933:716958..717352Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1491911889:725582..726034TCONS_00050931-exon-scaffold_19-1491911889:725582..726034Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1491911889:724980..725099TCONS_00050931-exon-scaffold_19-1491911889:724980..725099Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1491911889:724545..724607TCONS_00050931-exon-scaffold_19-1491911889:724545..724607Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1491911889:724122..724206TCONS_00050931-exon-scaffold_19-1491911889:724122..724206Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1491911889:722943..723065TCONS_00050931-exon-scaffold_19-1491911889:722943..723065Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1491911889:721978..722090TCONS_00050931-exon-scaffold_19-1491911889:721978..722090Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1491911889:720894..720978TCONS_00050931-exon-scaffold_19-1491911889:720894..720978Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1491911889:719170..719284TCONS_00050931-exon-scaffold_19-1491911889:719170..719284Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1491911889:718357..718416TCONS_00050931-exon-scaffold_19-1491911889:718357..718416Clytia hemisphaericaexon
TCONS_00050931-exon-scaffold_19-1491911889:716958..717352TCONS_00050931-exon-scaffold_19-1491911889:716958..717352Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:716958..726034 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0858939	0	0.034101	0	5.94942	5.93501	6.11566	4.09115	4.71393	5.23756	13.3532	15.1599	13.5978	14.5155	5.27725	6.42076	9.86522	4.95065	9.97518	10.4108	4.581	3.13677	1.03168	1.62343	1.8377	1.6282	11.1705	5.60472
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR018108Mitochondrial_sb/sol_carrier
IPR023395Mt_carrier_dom
Blast
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BLAST of TCONS_00050931 vs. Swiss-Prot (Human)
Match: UCP4 (Mitochondrial uncoupling protein 4 OS=Homo sapiens GN=SLC25A27 PE=2 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 5.939e-109
Identity = 164/303 (54.13%), Postives = 214/303 (70.63%), Query Frame = 3 
Query:  408 TKYLISITAAGAAETTTYPLDITKTRLQVQGEHASR---SASTETRAYRGMVGTAIGIAKEEGFLKLWEGLPPALARHIIYSGSRMVFYEHLRNNVFKRNEDGSFDLWKXXXXXXXXXXXXQFLASPTDLVKVTMQYEGKRILDGHQKRYKGATDAFLVLLKQRGFIGMWKGWLPNVQRGALVNLGDVVTYDKSKRFFMLHFNTGDSILTHSLASVCSGFVASLFSTPADVIKTRIMSNPD-------AYKGVVDCFTQAVRNEGFMSLYKGFIPTWARLAPWIVIFWLSNEQIRKGIGVEGF 1286
            +K+L+S  AA  AE  T+PLD+TKTRLQ+QGE A       + E+  YRGMV TA+GI +EEGFLKLW+G+ PA+ RH++YSG RMV YEHLR  VF ++ED  + LWK++I    AG  GQFLA+PTDLVKV MQ EGKR L+G   R++G   AF  +L + G  G+W GW+PN+QR ALVN+GD+ TYD  K + +L+    D+I+TH L+S+CSG VAS+  TPADVIK+RIM+ P         YK   DC  QAV+ EGFMSLYKGF+P+W R+ PW ++FWL+ E+IR+  GV  F
Sbjct:   21 SKFLLSGCAATVAELATFPLDLTKTRLQMQGEAALARLGDGARESAPYRGMVRTALGIIEEEGFLKLWQGVTPAIYRHVVYSGGRMVTYEHLREVVFGKSEDEHYPLWKSVIGGMMAGVIGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRGVHHAFAKILAEGGIRGLWAGWVPNIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSSLCSGLVASILGTPADVIKSRIMNQPRDKQGRGLLYKSSTDCLIQAVQGEGFMSLYKGFLPSWLRMTPWSMVFWLTYEKIREMSGVSPF 323
The following BLAST results are available for this feature:
BLAST of TCONS_00050931 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UCP45.939e-10954.13Mitochondrial uncoupling protein 4 OS=Homo sapiens... [more]
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