TCONS_00050942 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050942
Unique NameTCONS_00050942
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length180

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050942 ID=TCONS_00050942|Name=TCONS_00050942|organism=Clytia hemisphaerica|type=transcript|length=180bp
CTAAAGAATTGAGGAATTTAAGTGGATGCCCTGTGCTAGAATTCAAAAAG
AAGCTAGACAAGTTCCTTGTTTCTGTTCGGGATGAACCTTCTGTTCTAGG
TGCAACAACAAATGCTGCATCCAACTcaatcaaacatcaaatcaataatC
GGCAGGCGGACATTGGATTGTTCACCTAGA
Run BLAST on NCBI

transcript from alignment at scaffold_19:240427..240606

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050942 ID=TCONS_00050942|Name=TCONS_00050942|organism=Clytia hemisphaerica|type=transcript|length=180bp|location=Sequence derived from alignment at scaffold_19:240427..240606 (Clytia hemisphaerica)
TCTAGGTGAACAATCCAATGTCCGCCTGCCGattattgatttgatgtttg
attgAGTTGGATGCAGCATTTGTTGTTGCACCTAGAACAGAAGGTTCATC
CCGAACAGAAACAAGGAACTTGTCTAGCTTCTTTTTGAATTCTAGCACAG
GGCATCCACTTAAATTCCTCAATTCTTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032283XLOC_032283Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050942-exon-scaffold_19-1491911889:240427..240606TCONS_00050942-exon-scaffold_19-1491911889:240427..240606Clytia hemisphaericaexon
TCONS_00050942-exon-scaffold_19-1510915933:240427..240606TCONS_00050942-exon-scaffold_19-1510915933:240427..240606Clytia hemisphaericaexon
TCONS_00050942-exon-scaffold_19-1575043694:240427..240606TCONS_00050942-exon-scaffold_19-1575043694:240427..240606Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:240427..240606 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050942 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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