TCONS_00050983 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050983
Unique NameTCONS_00050983
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4508

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050983 ID=TCONS_00050983|Name=TCONS_00050983|organism=Clytia hemisphaerica|type=transcript|length=4508bp
cgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcg
ttcgttcgttcgttcgttcgttcgatcGTTCGATCGTTCGATCGTTcgat
cgttcgttcgttcgttcgttcgttcgttcgttcgttcgttatacAATCGG
TACTACCTGTTGCATTTATTTTGATTATCTAGGCGGAACTTTACTGGGAT
GTGTCCGTCATAAAGGTTTGATCCCCTGGGACGATGATCTCGATATAAGC
GTAATGGCAAAAGACGAGGAAAGGCTACTTTCCCTAAGAAATGTTCTTTT
GGAGGAAGGCATCATCCTTAAAGAGGCGTTTACAGGCTATGTCATGTACC
ACAAGACGGAATCAACACCCTCTGAAAATAATGTCAACAACGAGGTGAAC
GATCGTCGGCTGccattttgtgacgtcataattatgCAAGATAGTGATAA
AGCCGATCGTGTTGAAATACGAAACGGTCGAGCGCGAACATTTTGGCTCA
ACGAATGGTTCAAACACACTGAAATCAAATCACTGAAACCATgtcttttt
ggtgatttttattTCATGATCCCGTGCGATCCTATGGGATATTTACACCG
TAGTTATGGTGAAGATTGTTTGAAAGTTGCACGAACTCACGATTACGATC
ACAATACGAGATCGTCAATGCAATCTGAAGTTATACCATCGTTTGAATTG
GAACCTGCCAAACCCTTTTACTTAGATAATGTGAAATGAGATAACGACAG
CATCGAAGAAGAACGTCACAGATGACGGTAATAATGGTGATTATATGATG
ATGTTGGTGATGATGAATTTTAGGAATAGCCTTACAGCGACTGGATGCTG
TCAAACGTATTTCCACCTATAGTAAAAGCAGAAAGTCGTAAGACTTTGTT
GATAATACGTAGATCGTTTATGAAACTTTAAAAGAGAGAAGAATCGACGA
GAAGGGTGAAAACTATGAGGTGCCATAAAAACTGATCTGTTGGGAGTTAA
AAGGTGAATTTTTCAGGATTGTCTTTTCTCATGGATATCTCCGTCtggta
aaaaattgaagaaaatcagAGAGGTAACGatgtcaagattttttgaattt
tggatgactTGACATGGAATTACCCTTTCAGTTCCTCCTGagttagaaaa
attttaaaattcgacattttgattgaaagtgaaagtgaattgaaagtgaa
agttgtaataaaaacaaaaatcggAGGTACCTTTCTAGAAGAAAcggttg
gaaattttgatttatgaAGCGTATGTAGATGGAATAACAATTGAGTTATG
AATTGGTATATGCATGAAAACGTTTCTTTGAGTCAGCAATTATCGTTCAG
CCACAACAAAGCTCCTCCcttttgtcaaattttatgcaatttttattttt
gtggaATATTTTGTAAGTACAACActgtattttagcatttttcaaTGCTC
TTGCTATTGTTTTCTTTAATCTGAAGATGGTAACGGAATGTCCAAGCGTA
TTTTGTCTATATAGTATAGAATATAGGTTTTTATCTGTTCATTCATCTGC
ATTCAATCAGATGCTTGTAGCTTGTTTCTTTATAATGATcatcttttttt
cactttacagTAAAAGATACAATGTAGAAAAGTTAAAAGCTATACTTTAT
CCATATATCACAATAACTTACAGAAGCATTTAGTTCAAAAGATGGTGTCG
TATGGGGATTACAGAAAACGAACGTGCAAAATATGATGGCATTGTTGAAA
ACTGTATGGATCCAGAATCAACAACGACAAACCTAAATTGGCTCTTCCAG
TTAAAGACCGTTACACAGGGGTGGACGACAGCGGATTTTCgagCTAAAGT
AACATATCCTACCACACCACAACAAATCAACCATTATGGGTTCATGTACA
AGTAAAGGAGGTGTTGTAGTGCATCACCATCACCATGACGACAATCATAA
TGAAAATGGCAACCTACCAAAACAACAACCCAATCAACCACCTGTCAATC
ATCacgaaaatcaagaaaacattAAACCCGTTGTTAACCATGAAAATACA
CAGCCGTCAAGAGACGTGAACGTTCCTATCAAAGAGGAGAGTCCTCAACC
GGAGGAAGAACGGAAAGCGGGCGACGGGCAGGATATACAACCGGACTCTT
CTTCACCGAAAGAACAAACTGAAGTCAATGTGATTGAAGAtgctaaaaaa
gaaattgaagatgCTGACGAGGTGACAAGTCTTGACCTAGAACAAACACC
ACTGGCAGAAACGATACCAAACGAAACGGCAGAGAGTGAAAGTAAACCAG
AAAATCCTACTGAAACACCAGCAGAGGAAACTCCAACGTCAAAAACAGCA
GTAACAGAGGAAACCCCTTCTGTTGATGCTCATGCAGAAGAAACGCCAGA
ACAAGCAAAACCTAAGGACTCAGCAGACCCTGCTCCTGAGGAACCTAAAG
AAGAAGGAACTCCTGCAGACCAAACTGATGAAACGACTGCACAAGAAACA
ACAGAGGAAACCCCGTCAACAGAAAACGAAACTAAAGAGGAAACCCCAGC
AGAAACAAATGAAACTGAAGCAACACCAGTAGAATCAGCTGAAAACACAG
AAGATAAACCGTCAGAATCAACTGAGGCTACAGACGAACAGCCAGCTGAA
TCAACTGGTGATGAAAACCATAGTGAATTCAAAGAAGAACCAAAACCAGA
CGAAAGTACAAAGGCTACAGAAAGTGCAGAGGCAACGGGGGAAAGCGCAG
AGGCTACAGAACCAGAACCATCAGCTGAAAATACGGAAGAAGCACCACCG
ATTAGTGATGAAGGTGATAAGCCAAGTGAGGAGGCTTCTCCATCTGAGGA
CAATGTAACTGAGGAAGCTGCCCCTGAAAGTGAAGAGGCAGCCCCCGTTG
AAGAAAGTCAGGAGCCAGCACCAGAAAGCAGTGAGCCAGCTGTAGAAGAA
CAATCGGAGGCTCCCGCTGAACCTTCAGAGTAACATGTTTGCTGTTATAG
TTTTATACAAATGGAAATGGTCTATTTTGACTCCCTTTTTGGAGTTCTCG
CTTGACTCTATCTTGTAATAGGGTGGAGTTAGTTTATATGAGCAGTGAGA
AGCCTGTCTGTCTAAAGCCCAGCAGACAATAAATAGTTTAACGTTCAGTT
TGGGACCTTACTTGTTCCCCAGGTAGCATCAGCCGTCCACAGCATCCAAA
TAACGGTACGCGGTCTTTGTGTTCCATTTTTGGACGCCCTTTTGAATTTA
TGAAGGCTAAACGACACGAGGTTATAAAACTTTACTTTGGAAAAGTACGT
TTGTCAATAGGTATATATCGGTGGataataaattttgtaaatatctgATT
TAAcattataattttttatgaacaCAAATAATTGGGAAAGGGCGTTTCTC
taattttgactaaaaatcGTAGTTGAAAACTTAACAAAGACTTATTCGTA
GACCTTTAGGAGGATATACCccatgaaatttgaaattttgggtgCGTTCA
GTAAATATGATAAATATCAGTCTGGGGAAATAGGGTAATTTTCGCGATTT
ATTGCAAAGGGAAAATCAGATCCATGTTTTTCCCGCAAACTTTTAGGCTG
CACGTATCCCCTCTGATGTTTtgaacatccccttctcactaGCCTGTACC
ACCCCGCCCACGATCGtttagtattttttgaaaaaacttaccgtgttatc
ttttcagtcagcgaaGAAAAGTTTGTTACAGGCTACCTCCTCAAAGACCT
CGTAggattttttcatgttttttaacGGCGGGGAacttgaattccattgt
tttcaagtcagaaaattcagtgggaatagaaaaaatagcacaatattttg
ctaATGCTATtagaggatttgtttattttattttcacagTGGGAGGGATG
CTCATTGTGTTTAAAATTCCCACCCGAGAACTACCTTCGTGGTTGTGTTT
TTAAGTATTTGAAGTTACCTGATTAGTAAGTTTTTCTTACGAGAggtctt
taaatttcattaaatttgaattaaaaatttgaatggctagaATTAGCCTC
TAGCCATTCaagcttttaattcaaatttaatgaaaacacgctttttttat
aagaataacttctataactTATAAGAGTATCAAGGTGAGATTTCAGAGTT
AGAGCAATGGACTTATTGTTtataacaatagaaaaagaagaataatgctc
acccagccaaagtacactattcttataaaaaaaagcgtgtacaatcattg
gatttctgaacctttttaagaaaattatcgTTTCATTTTACACACGATAT
TAGCATTCCTATATCAAATCAGGGGATGTGGGCAGCCAACGCAAACTCAT
AAAAATTGAGAGGGTTAAAGAATTCATAAGTTTTTATGAGCCTTGTTATA
ACCGTTGTAAATATGGAACTATAAAAAAGTTTATATTGTATCTGTACTTT
aagttcaaaaatttttaaccaTCAAAGAAGAAGTGTGCTTTTAGTAAATA
ATTTCTAA
Run BLAST on NCBI

transcript from alignment at scaffold_190:5087..21942+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050983 ID=TCONS_00050983|Name=TCONS_00050983|organism=Clytia hemisphaerica|type=transcript|length=16856bp|location=Sequence derived from alignment at scaffold_190:5087..21942+ (Clytia hemisphaerica)
cgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcg
ttcgttcgttcgttcgttcgttcgatcGTTCGATCGTTCGATCGTTcgat
cgttcgttcgttcgttcgttcgttcgttcgttcgttcgttatacAATCGG
TACTACCTGTTGCATTTATTTTGATTATCTAGGCGGAACTTTACTGGGAT
GTGTCCGTCATAAAGGTTTGATCCCCTGGGACGATGATCTCGATATAAGC
GTAATGGCAAAAGACGAGGAAAGGCTACTTTCCCTAAGAAATGTTCTTTT
GGAGGAAGGCATCATCCTTAAAGAGGCGTTTACAGGCTATGTCATGTACC
ACAAGACGGAATCAACACCCTCTGAAAATAATGTCAACAACGAGGTTAtt
ctaataatattttttcaataattaacCATTACAAAAGTGAAGGCATTCTC
TTGGTGATATAGTTGTGAAGAAAGATGCCTGTCCTCTCTTTCTTATAAAG
GACTCCCCTCTTTCTTATAAAGGACTCCCCTTTTCTTGGCACTACACCCT
AAACTTTCTTAACTAGAGAAATAGGACCACTCACAGAAATTTTCAATCCC
CaccaatatatttttcagaaaattctagAAATTTTTAATCCCCATCAATT
GATTTCTCAGAGAATTCTTTTCGTTACACACATACACATTCATTATAGAC
AACCATTTTGTGACGCCATGTGATGTCATAATTATGCAACATGGCAATTA
AGCCGATTGTGGAATGAAAATACTGAACAAAGAAAAACAGCCGTgttaat
aaatattttctatacATGGGGTTTATATTTAAAACAGCTCATTATATATG
TCTTTTGgtaactacagttgacgctctctaattcgacattttACTATTCG
ATAAGTTCCATTactcgataatattgaaagtcatctTCAACAACATCGTC
TGAtaaacgacgttctactattcgatattctcccttattcgatgaaaatc
taatcCTCCTTTAAAGTCGAATTAGAAAGCATCAACTGTATTGAATTTCA
TACATCGATTTCAGCTTATGCTCatggaaaaatctttcaaagactTGAAC
CTGGATATGCCTTTTTGTgtcattcttataaagttatgtAATTCCTTCAC
TTAAGGGCTCAGACTCAAAGTCACATTTTGACTATATTTTTGCTTAAAGT
CCTGAGTTGTTTTTAAGCTGAAATCGAATTCTTTTTATATTCAGGTGAAC
GATCGTCGGCTGccattttgtgacgtcataattatgCAAGATAGTGATAA
AGCCGATCGTGTTGAAATACGAAACGGTCGAGCGCGAACATTTTGGCTCA
ACGAATGGTTCAAACACACTGAAATCAAATCACTGAAACCATgtcttttt
ggtgatttttattTCATGATCCCGTGCGATCCTATGGGATATTTACACCG
TAGTTATGGTGAAGATTGTTTGAAAGTTGCACGAACTCACGATTACGATC
ACAATACGAGATCGTCAATGCAATCTGAAGTTATACCATCGTTTGAATTG
GAACCTGCCAAACCCTTTTACTTAGGTAAGAAATGAATTATTACTCTAAG
ACCATGTTTGCACGTAACGATTCCGTTActctccgaaacgaaatgaagcc
gttctattggttacattcaagttttgcgtcacttctaaccaatggaatgg
cttcatttcgtttcggagcgaatcaacatttaaaaaatttcgtgTGGATT
TGATTTTGTCGAATGactcaaaaagaatttttaaagtGCCCCTGTTATAA
CGCCAAAAATAGCCACTTTACATCGAATTGTAAAAGCTATTTCATAAAAA
CTACTCTCACTTACCCATTAAGCGTCCGCCCCCGCTATTTTGCCCTAATA
TAGCtagctgtattagcctcttcaaaaattttccacccagcacattttta
ttccaacccgcTTATTCCACCCCACCCCGGCTATCAGGTACCCTAGAGTA
CGCCTTGTTGGTCCAATTGGATTAAGGAAAAGTGTTTATTCTTTTACTAG
ATAATGTGAAATGAGATAACGACAGCATCGAAGAAGAACGTCACAGATGA
CGGTAATAATGGTGATTATATGATGATGTTGGTGATGATGAATTTTAGGA
ATAGCCTTACAGCGACTGGATGCTGTCAAACGTATTTCCACCTATAGTAA
AAGCAGAAAGTCGTAAGACTTTGTTGATAATACGTAGATCGTTTATGAAA
CTTTAAAAGAGAGAAGAATCGACGAGAAGGGTGAAAACTATGAGGTGCCA
TAAAAACTGATCTGTTGGGAGTTAAAAGGTGAATTTTTCAGGATTGTCTT
TTCTCATGGATATCTCCGTCtggtaaaaaattgaagaaaatcagAGAGGT
AACGatgtcaagattttttgaattttggatgactTGACATGGAATTACCC
TTTCAGTTCCTCCTGagttagaaaaattttaaaattcgacattttgattg
aaagtgaaagtgaattgaaagtgaaagttgtaataaaaacaaaaatcggA
GGTACCTTTCTAGAAGAAAcggttggaaattttgatttatgaAGCGTATG
TAGATGGAATAACAATTGAGTTATGAATTGGTATATGCATGAAAACGTTT
CTTTGAGTCAGCAATTATCGTTCAGCCACAACAAAGCTCCTCCcttttgt
caaattttatgcaatttttatttttgtggaATATTTTGTAAGTACAACAc
tgtattttagcatttttcaaTGCTCTTGCTATTGTTTTCTTTAATCTGAA
GATGGTAACGGAATGTCCAAGCGTATTTTGTCTATATAGTATAGAATATA
GGTTTTTATCTGTTCATTCATCTGCATTCAATCAGATGCTTGTAGCTTGT
TTCTTTATAATGATcatctttttttcactttacagTAAAAGATACAATGT
AGAAAAGTTAAAAGCTATACTTTATCCATATATCACAATAACTTACAGAA
GCATTTAGTTCAAAAGATGGTGTCGTATGGGGATTACAGAAAACGAACGT
GCAAAATATGATGGCATTGTTGAAAACTGTATGGATCCAGAATCAACAAC
GACAAACCTAAATTGGCTCTTCCAGTTAAAGACCGTTACACAGGGGTGGA
CGACAGCGGATTTTCgaggtaaaatgtttttttgaaattcctggaTTTCC
TATACAAAAGCAATTGACCCTACTGGATTTCCAATCTGGATTTTCCGata
cttttgaagattttgataaattctatggaatttccaagggtttaaataaa
aaattgagcgGAATTTCCGTAGCACTTTTAAAAATTGACTGGATTTCCAA
gtgtttttttatctgaaaattcctGTCATCCACCCCCTATAtcgaatttt
tttctgaaagagcccAATCCGCAAACGTCTTTTATGGACAAACccaaccc
agctgacacacaacgttgtttcaacgttcatctaacgttatatgaatgtt
gtgaacgttagataaacgtcgaaaaaacgttgtgtgccagctgggaatga
TCAAATTGTAGCCTGCTAAATTATTGCTCACCCAGACAGATTTTTAAATA
TGATTTGTTGGACCATCCAAAATAAGGATGtatgatacacccccttctca
tagacccactggaaaaattgtccaaaatatcgtccccggtggaaaattat
cctccaatttttgtcccactgaaaataatcaaataaaccaatcctcactg
caaaaaatAATGCTTTTTTCCCCATCCCcaatgacttgaaaacaaaagaa
ttgaaattcccagccataaaaaatataggaATATCAAGTTTCAgcccgtt
atttttatccccacttgcTGAAAAAATCCTTCCGTGTCTGTAAGAAGGGG
GTATGTATGATCTTTAAAATCCTGAAAAGCTCGTCAATTTTCAGAACATC
GTTATCAAAGGGTCACAACTTCAGCACGCATCTTTATGAACCCTGGGTTA
AAACTTTCGGACTTGTCCAATTGGGTGGGCCTGTGTCGCAGGTGACCCTG
TTTTCATCTTGGTACAAGTAAGTCCAGCAAAAAGGGTCGAAACTGAGCTA
CTTACGTACCCTTACAATATTGTCGTCggatttgtcattttattggaTTT
GTCTTTTATACTGTGTATGTTGGATGGAAATGGGTATTTAAGTGTGTGGG
TTGATGGATGTGTACTACATGGCAGTTTTTACACTAGGCTCTCTGATAGT
GGTATCTGAGAGTTAAGTGGTATTCGAGCATTTGCTTTGAGCTATTTTCA
GCAATGAtctttgaaattgattttttggacttggacctaccttaaggtag
tcctttaaattaacccttgtccgttcgtccgtccgttcgttcgttcgtct
gttgccagcttttctcgggatcggctcattagttttttctaattttttgc
acaatgatgtaaaatggcaatacccaaaatgtgacggagcccgattttcg
aaaaaaatttttttccggtcgcCAGGTCCGGAAATGTCCcggaaaaagcg
gttttttgggattttctcgagatttcatcattagttttttctaatttttt
gctcaaagatgcgtattaacaatgcccaaaacatggcctagtccaattct
tgagaaaaatttttttccggccgaaaatgccggaaatatgccggaaatcg
ccgtttttctggattttcattgggctttttccatataattggttattttt
tcattcaaaaacattattaatagcaatgcccaccattaagcatgtttcaa
ttttcaataaaattgatttttgaagcNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCtttaatcatcaggtaggtccattcagcatattgcttgttGTGATTGG
GTTCGCTAGTTTTTGGATTCAGttattaaactttttctttatcaatagTT
CTGAATTGCTTTCTTTATATTTCGAATCTTGCTCtagttcaaagaaaatt
tttggcccgttgaagatcgaattagagagagtcaacatctgaaggcttta
aagacttatgattttttttaatgtgaCAATGATCAACACGTTTCTTTAAT
TATCAGAACATCCAAAAAGTTTTCGAAGCCCTCAGTTTTGAATTCGACAA
CTTCATTTCCTTAGAAATTGGGTGCTTTAATAGTCCACGAAGccttaact
tttttttgatatATATTGTAGCCCGCCGATTGTTCTCAAATACAAtcccg
gacaaaaggttgtagacttttcaaaattgaaaaaaaatctataaaatggC
CAGAATTCCCCTCCCCCTCCCAATGTTGTAGTAGTGGGATGGTCACACGG
CATCACCACAAACAGTATTGAAGGGAGGGATTTTTCTGAATGTCTTCAAA
CCTTTTGTCCGAGattgtagtttgttcttataaaaaaaatgtgttagGGG
CTTGATCTTTGAGCAGTAATAAGATCCCCTGAGAATATCAAGTTTTCAGG
CTTCAAACGGGTCGTCAACGTAACGTTAtaagacaaaaacaaaacacaca
aacaaaacaatcccatataaaaataaaatatgaaaaaaaaaaactaaaag
taaTAAGAGTATTAAATAATGGTCTTCAAATTGCTACTTTTTATTAACAC
TTTCGTTATGTTTTTATTTGCCATGGTAACCGTTAATAAACATTTGATgg
gagatttttttttcattatgtgtctttgtatgtttttttttgtgttgagA
TTTTGAGAGATGAGGGATTTATAGACAGAACTGTTTAAACTTTGCATtgg
tttttctcgaaatctCAAATTGACTTGTTTGATATGAGATTTCACATCTC
TCATAAATCTCAAATACTCTTTTTGTTATCTTCGAGTgatatgtttttaa
tttttcgcgATTATTTGAATGGCGTAATAAAGAGGGTAATCACAGCTATT
AGTATAATATCTCTTTAAAGGAGATGAtatataattttcttaaaaataag
tTATGGTTCATAAAATATTTATAGACAATTTGAACTTTAGAAGAATTCTT
GTCTTTGTACGGAAAGTTACAAAGTTataattacttttttctgatttagt
TTCTCTCAAGTTTTTAAAGTGACATTAGatgtttattttgaagatttgtt
GATAGTTTTCGCACTCTAGGTGCTAAATCCTggtacttttgattttttta
cctGGACTACCTCACGGGGAAAGACGGGTGTTTGGTATGTGCGAAGGATa
aggtaagggtcggtttttgatCTCTCAAAGCCTCTCTAAGGGTTTTGAGA
TTAGGTCTCGTCTGCAAATACCCggccagctggcacacaacgttgttcca
ACGTTACATGGACGTTGCGaagattagataaacgttgaaacgacgttgtg
tgccagctgggctacATTCTCCAACCCTACTAGCAACCCCCGGATTACCT
AGAGTAGATATTAATCGTAGATATTAATTCTTACGTTAcgctattttata
aaaatttaattgataTCAACTATAATTCCGTAATTCCAGTGTAATTAACt
ccatatatatatatatggaTTATCGCATCTTTTTTAAGAAAGTTCATCAC
ACTAGGTAAATCCAAGGTGTCGGACGGTCGTAGTGGATACCACATTttga
tatatatattttttgtatcCATTTTCCAGTGCAATTTATCTCATTCAAGT
TATATCGTCACTCCACATAAATAACAGTCGAATTAGTTTACCTTCTTATA
ACACTTCATCCGCCCCAGAACTTCAGAGGTCACCAATGCTGAGAACTAGA
AAATTCCTTTGTAATGACTGAGTACAAAATGCCGACCGTTGTCTTTCATT
TGTACACTTGAAACGAAAGGGActtcaactttttgtttttgtgggTAATA
TGACACTTTTGTCTATATGGCATACTTCCTGCTCTTGCGAGTATTTTGTT
CAGTTCTACACAGCATTTTAGAGAGAGATGTGTGGACGGTTGTGTTGACT
GTTTGTTCTATATTTTGTTAAATGTGtgtttttaatttgaaagaTATATC
CTTGGGCCAATAATTTAAAGGTTTTGTTTTTAAAtcagagtgatatcgtt
tgcttactcatcacttttaattcgcaagctttttcacattggattgacac
gtatgtggagcaagattggtcagaaaaggaaaagaaaaacaatttttgct
tattttaacataatataacaataggcagacactgtcctgatatgaaatat
caaCAGCTCAAATAAATCCATTAGCAATCATTAACTCCGCAGTTTGATGT
TTCTTATCGTCACAGATAGAGAACCGGAATTCTTAGAGAGAATCTgtctg
tcctgatatgaaatatgtgtctgatatgaaacgggaacactttaaaacct
ttaaaaacgttttaattTGATAACCTTTTCTGGAACTATTGTTGGTCATT
GTTAAAAAGTTGTTGGACtcaaatttgatttgttgttattttatttatat
aatCTTTAATGAACTGAAGTAAGTTTTTTGGTACACGTAGTATttcaaaa
ggatttttacgTTCTCTTTTTAACTGTCATTTTTAATGGTCCGCTACTAA
ACGGCTTTTTTGAAGAACATCCAATTTTTGATCCCTCTCGGATCTTCTta
gatttttgagttttaagcctaaaaatgttcttaacatgttcttattttca
ccattttgtgagtatttttgtcaattattctaagaaattgggtgttttag
ggtcCGGTTTTAGGGTCTGCAGAGCCTTAAAATGTATTCgacttgttttt
aacattttggccatctaAGCCTTATATTCtaatatagtttgttcctataa
aaattGTGTTGTCATAAGAAGACCACAGCACAGGCTCCTCTTTGAGAAAT
GATAAatttgggctattccagaaatagtctgtaccccctatgttggtCAG
TAAAACGGGGTCAAAAGTCCAGGTTGGTccaaaaaatacgaaaaaaacCT
TAGGGAGGTCctgaaaatttgtgaaaaaaaatccaggggggtcACCTTTC
TCCAAAAAAAAAGACATCAACAACATAGGGCAACATAGGGgtaacatttt
tttctggaatagcccattatgTGTTGTTTTATTGCAGTCGAAGAAGGGAA
ATTCACGATGGAATTAAGATCTTATTGGAACAGGTTAACACAGAGATAGG
GGTATAATATATAAGTTGCAAAtcttgattttatcaaaaccgAAAAGAGA
TTACAAAATAGTGATCATTCTAGTATCCGCCATGTTGTCTTGAGAGTTCG
TCACCATGGTAATATCTTAAACAAATTACGTAATCAGCGTATACATATAT
CTCGTTTAAGTAAATTAACTGTCTGTCTATATAATATAGAAATTGATATA
GTGCAAACATTGAAAATATAGTGTAACAAGATCATCTTgccaaaaattgc
attttctgTCAATTGGTTCAACGTCTTCGAAAGTATTTTATGTTCGGATT
AAATTACTTGCTTGAAAAAGGGTGTAGTACGATATAGCATTGTTTTGAGA
TTGTTTTAAAGGGTAAGGATGTGTTTTGTCGGTTTGAGCAACGTTGGTTC
GAGTAtaccatgttttttttaaagaacatctaaaatttttgaagcctttg
gatgttcctaactttttgggtttaaataaagtcttaaaatgtttttattt
tttccattaTGAGACcattttttacccattttccctaaaaaatcGGATGT
TTTCGAGTCTGCAAatccttaaaatgctcttaacttgttctttagtattt
tggccatcgaagccttaattttcttatatagtttgttcttataaaagaaa
acgtgtTTGTGTGAATTTTGTTGATTTGAGTGTTTTATCAGGAGAGGGAT
GTTTTTCAAACCCTGgtgtttttttgtttgcaaacccaaattcttgatat
gcgaAAGTCATTTTTCTAACGGAAACACCCTGAAAAAGAAACACGGTGGT
CACAATccagcttttttcttttttgtgcTTCCGTTAGCCAATATGACGCC
ATCTTGATGACTTACTTGATATAAGGAATAGAGACAAAAGAATAGCTGAG
CTTTCAGCTCTGAAAGAGGGTTAGAGCTTTGTCGTAATTCTCCTCGGTAT
TCGTTTTTTATCCGGACAATTTTACCGTAATATGTAAAAGACCACATTTG
ACCTAAACATAGGATATGATAGATTTCAGGTTCCTTAGCGCTAAAAATAA
TCGAGACTCGACAGAAACTTAGTATCGAAGTTATCGtacgttacagtgat
agtaaaggtgGGAAAGTATGGCGGTAtgggcgttatggcggtatactgAA
AAAagtcggcgggagagtttcgaagactggcaaactctaccggctgtaaa
ctgtttttggcaaaaaagcccgtttgcgaattttctttctcctttgggct
tatttcttagatagcgatttgtcttagactatagcagtctacatttttct
ttgatcgtagaatcaaaagaaaaaggatGTATATATTCTTGGGAGCCTCG
GTTCGGACCACAAGTTTTGGAAGTAATGAAACCGCTATCAGTCGAATTGA
AATAAACTTTTATCTAAATGGATAGTTTCGATGATATTTTGATACCtcat
taaattttgaatatttttttcacatAAGGATTTTCAAGTTGGACGTTGAT
TAGTGCGAGAGATTAGTGTAATGCATCTTAACGTTGTGAATTTCAACATT
TCCAGAATTTTGAATTGTCAactttatttgaaagtttttaaatatttgca
cATTACTACCCAAGAGAGCTctatattttatgaaatatttaaatCTCTCA
TTCAATAAATTTTTATGATAAGTTTGTTACCATAATATGTTTGTTAACTT
ATTTCCTAATACCGAATTCATATTTTAAAAGTCTTTGTAACTAAGGGTTA
CCAAGAAAACAATATGGCAGCTTCTTCTTTCTTTACGGATTTCCGATTGA
CTATTACCTACTGATTTTTTTCCTTCGAATGTCAAAatctaaaagaattt
tttagatttgaTTTTATGAAGGTTTTCAgctatcaaaaaaatttgttaaa
attttactTATATTTCTGTCGTCTTGACAACAAAACTGGcttggtttttt
tcttttttcccgtGTGAAGGTAAAATTATGCGGAATTAATCTTCTAGTAT
TTTGATATTGTTAAATTATAGTGttttaaaagaaatattatttCGAAAAT
GTCTGAGAACATTTCTCAAATTGATGTAAATTAGATTTTTGAGTGCTCTA
TGATTATCACCTCTTTCCTAGGTTTTTACTCTTTTACTTACTTTGCATAT
TCCCATGGTTTTTCACCCAAACTGAAGAAGAAGTTGTGTAATTGTTTATA
AAGGGCTTAAAACTATGTTCACGCACATCTTAGATTTTATGAGGTTTTTA
TCATGCTTAGTAAAAAATTAAGCAATTAACcttgatttttttggtttttc
aaatCTCAAATCGAGTTTTTCACCGTGCAAGTCACCGTGGCTTTCAcggt
gaaaaattaataaatcacCGATCTAAAATTTCATATTGAATTGCTACTTT
TTACACCGAGAGTTGGTCAATACGTATAAATTACCTTTCCATAGCAGATC
TTGTCCTTTGGgacacttgttttttttttaattttttctcagtGGATATT
AACTTTATCAAAAATAGTACTTGGGATACATATACGAGAGTAAGATTATG
GAAGAATGAATCCGAGAGATTGTTAAAgtcataaaagtaaaaatttcttt
catcTTGTTTTCCAGCTAAAGTAACATATCCTACCACACCACAACAAATC
AACCATTATGGGTTCATGTACAAGTAAAGGAGGTGTTGTAGTGCATCACC
ATCACCATGACGACAATCATAATGAAAATGGCAACCTACCAAAACAACAA
CCCAATCAACCACCTGTCAATCATCacgaaaatcaagaaaacattAAACC
CGTTGTTAACCATGAAAATACACAGCCGTCAAGAGGTAGTAAAACCACTG
TTTCGTACAAAGCAAATCTGGCCGAAATTTCGTCTCCAAAGGgaaaaata
cctaatttcaGGTCCACcggggaaattgactttgatttaatCCCAAGTCG
TTCAATGTAAAAGATTCTATTGGATCTTTTGAGCTTGAATGTTGGAACAA
CAGAATTTCTACCCCAATATACAGGttgcaaaaataaagtttgaagtcaa
atcacgcttttgctcgaaatttttatgtgcttgttacatgacctttattt
ctgattggttcgaatttattaaTACTGAGTTAAAAaccaagtaacatggg
aataaagtcacatgaactttttcgaggaatcacatgttttgactgcactg
ctataattttgcaacccgtgtattgggacttcgatagaaatttttatccc
cgtggggaaaagtttcaccggggctgcgagacaaGCGTGTCAGACTGTTG
CTTAGATTTTATTAAGGTTTCTTAGCTTTCACGTACTTATCTTTAAATCa
tcattttaaaaaatattaatgatttttttgaaattcttactACAGACGTG
AACGTTCCTATCAAAGAGGAGAGTCCTCAACCGGAGGAAGAACGGAAAGC
GGGCGACGGGCAGGATATACAACCGGACTCTTCTTCACCGAAAGAACAAA
CTGAAGTCAATGTGATTGAAGAtgctaaaaaagaaattgaagatgCTGAC
GAGGTATGAATTCAACCTTATTCCTGATTGGCGCAAACTATCAAAACAAG
GTCTatctaagctctagtttagacggccNTTCTCAGTTAAATGACTGATT
CAGTCTTGTTTATCTTAAACTCATTATCTTTTGCATTGTcaatatttaaa
atttcatattaccattttacaaCTCTgagtcacagacccggtgggacccg
cCCTACTGGCAAATCTGGCCGAAATTTCGTCTCCAAAGGgaaaaatacct
aatttcaGGTCCACcggggaaattgactttgatttaatCCCAAGTCGTTC
AATGTAAAAGATTCTATTGGATCTTTTGAGCTTGAATGTTGGAACAACAG
AATTTCTACCCCAATATACAGGttgcaaaaataaagtttgaagtcaaatc
acgcttttgctcgaaatttttatgtgcttgttacatgacctttatttctg
attggttcgaatttattaaTACTGAGTTAAAAaccaagtaacatgggaat
aaagtCACATGacctttatttctgattggttcgaatttattaaTACTGAG
TTAAAAaccaagtaacatgggaataaagtcacatgaactttttcgagtaa
tcacatgttttgactgcactgctataattttgcaacctgtgtattgggac
ttcgatagaaatttttatccccgtggggaaaagtttcaccggggctgcga
gacaaGTGTGTCAGACTGTTGCTTAGATTTAATTAAGGTTTCTTAACTTT
CACGTACTTATCTTTAAATCatcattttaaaaaatattaatgattttttt
gaaattcttactACAGACGTGAACGTTCCTATCAAAGAGGAGAGTCCTCA
ACCGGAGGAAGAACGGAAAGCGGGCGACGGGCAGGATATACAACCGGACT
CTTCTTCACCGAAAGAACAAACTGAAGTCAATGTGATTGAAGAtgctaaa
aaagaaattgaagatgCTGACGAGGTATGAATTCAACCTTATTCCTGATT
GGCGCAAACTATCAAAACAAGGTCTatctaagctctagtttagactgcat
ttagtagggggccaagcctggggttccgtgacatcttttttaagACCTAa
tcatttttagtctattccaaagaacagtatattacaagatatttttgaga
gggaggacgcggattaggcccgggaaaactctttatgaccaaaatagtga
cgccataggcaaaactgcaaggaaAAATAAGGGGTAGGAGAATAGCTGAT
TTtcgaaagtcaaaataaacgaaattgATTGGTACTatctgatagagcat
gaaattctgaacaaaaaattgtattacaacaactctgtgactaaaacaca
caataAAATGCagccgctttaagaccaactaactgtcagctctactgcga
tttgacgtcaaatcttgtcttggTCAGTCTTGATCGTACTatgacgtcgg
tatgtttttgaacttcaagcggctgtatttctttgtgtgttttagtcaga
gagttgttgtaatacattttttttgctcaggttttcatgctctttctgat
ggtaccaatcattttggtttattttgactttcgaAAATCAGCTGTTTTcc
taccccttattttcccttgcagttttgcctatggcgtcactattttggtc
ataaaaagtttttccaggcctaatccgcgtcctccctctcaaaattatct
tttaatatactgttcttttgaatagactaaaaatggctaggtcgtagaaa
agatgtcacgggaccccaggcttggccccctactaattCTCTACCAATTC
AGCAAAGTCCGCCGTCTAAACTAAAGCTAACCTTCACATCATATACCTAT
CAACCCTTTGTAGTGCGATTGGCTTTTGAGGAAAGGAAAGCAAGTTTTTC
CCTAGCGCAGGGCATTTTCAAGATTGCCTCTAAAACAAACCAAGCGAATT
CCCGCTAAAACTTTAAGATATGAGAGACATTTCACTGTGGTGGAGTGGTG
TAAACAATCATAACCCTTTAGCGACGCTACTTACTCATTTTTCATTGGTT
AAAGGTATATCAGGCAACATTAAATTCCTTGTATTTCAATTATATTTATA
CCTCTGGTTCATCTTACAGGTGACAAGTCTTGACCTAGAACAAACACCAC
TGGCAGAAACGATACCAAACGAAACGGCAGAGAGTGAAAGTAAACCAGAA
AATCCTACTGAAACACCAGCAGAGGAAACTCCAACGTCAAAAACAGCAGT
AACAGAGGAAACCCCTTCTGTTGATGCTCATGCAGAAGAAACGCCAGAAC
AAGCAAAACCTAAGGACTCAGCAGACCCTGCTCCTGAGGAACCTAAAGAA
GAAGGAACTCCTGCAGACCAAACTGATGAAACGACTGCACAAGAAACAAC
AGAGGAAACCCCGTCAACAGAAAACGAAACTAAAGAGGAAACCCCAGCAG
AAACAAATGAAACTGAAGCAACACCAGTAGAATCAGCTGAAAACACAGAA
GATAAACCGTCAGAATCAACTGAGGCTACAGACGAACAGCCAGCTGAATC
AACTGGTGATGAAAACCATAGTGAATTCAAAGAAGAACCAAAACCAGACG
AAAGTACAAAGGCTACAGAAAGTGCAGAGGCAACGGGGGAAAGCGCAGAG
GCTACAGAACCAGAACCATCAGCTGAAAATACGGAAGAAGCACCACCGAT
TAGTGATGAAGGTGATAAGCCAAGTGAGGAGGCTTCTCCATCTGAGGACA
ATGTAACTGAGGAAGCTGCCCCTGAAAGTGAAGAGGCAGCCCCCGTTGAA
GAAAGTCAGGAGCCAGCACCAGAAAGCAGTGAGCCAGCTGTAGAAGAACA
ATCGGAGGCTCCCGCTGAACCTTCAGAGTAACATGTTTGCTGTTATAGTT
TTATACAAATGGAAATGGTCTATTTTGACTCCCTTTTTGGAGTTCTCGCT
TGACTCTATCTTGTAATAGGGTGGAGTTAGTTTATATGAGCAGTGAGAAG
CCTGTCTGTCTAAAGCCCAGCAGACAATAAATAGTTTAACGTTCAGTTTG
GGACCTTACTTGTTCCCCAGGTAGCATCAGCCGTCCACAGCATCCAAATA
ACGGTACGCGGTCTTTGTGTTCCATTTTTGGACGCCCTTTTGAATTTATG
AAGGCTAAACGACACGAGGTTATAAAACTTTACTTTGGAAAAGTACGTTT
GTCAATAGGTATATATCGGTGGataataaattttgtaaatatctgATTTA
AcattataattttttatgaacaCAAATAATTGGGAAAGGGCGTTTCTCta
attttgactaaaaatcGTAGTTGAAAACTTAACAAAGACTTATTCGTAGA
CCTTTAGGAGGATATACCccatgaaatttgaaattttgggtgCGTTCAGT
AAATATGATAAATATCAGTCTGGGGAAATAGGGTAATTTTCGCGATTTAT
TGCAAAGGGAAAATCAGATCCATGTTTTTCCCGCAAACTTTTAGGCTGCA
CGTATCCCCTCTGATGTTTtgaacatccccttctcactaGCCTGTACCAC
CCCGCCCACGATCGtttagtattttttgaaaaaacttaccgtgttatctt
ttcagtcagcgaaGAAAAGTTTGTTACAGGCTACCTCCTCAAAGACCTCG
TAggattttttcatgttttttaacGGCGGGGAacttgaattccattgttt
tcaagtcagaaaattcagtgggaatagaaaaaatagcacaatattttgct
aATGCTATtagaggatttgtttattttattttcacagTGGGAGGGATGCT
CATTGTGTTTAAAATTCCCACCCGAGAACTACCTTCGTGGTTGTGTTTTT
AAGTATTTGAAGTTACCTGATTAGTAAGTTTTTCTTACGAGAggtcttta
aatttcattaaatttgaattaaaaatttgaatggctagaATTAGCCTCTA
GCCATTCaagcttttaattcaaatttaatgaaaacacgctttttttataa
gaataacttctataactTATAAGAGTATCAAGGTGAGATTTCAGAGTTAG
AGCAATGGACTTATTGTTtataacaatagaaaaagaagaataatgctcac
ccagccaaagtacactattcttataaaaaaaagcgtgtacaatcattgga
tttctgaacctttttaagaaaattatcgTTTCATTTTACACACGATATTA
GCATTCCTATATCAAATCAGGGGATGTGGGCAGCCAACGCAAACTCATAA
AAATTGAGAGGGTTAAAGAATTCATAAGTTTTTATGAGCCTTGTTATAAC
CGTTGTAAATATGGAACTATAAAAAAGTTTATATTGTATCTGTACTTTaa
gttcaaaaatttttaaccaTCAAAGAAGAAGTGTGCTTTTAGTAAATAAT
TTCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032324XLOC_032324Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050983-exon-scaffold_190-1491911889:5087..5480TCONS_00050983-exon-scaffold_190-1491911889:5087..5480Clytia hemisphaericaexon
TCONS_00050983-exon-scaffold_190-1510915933:5087..5480TCONS_00050983-exon-scaffold_190-1510915933:5087..5480Clytia hemisphaericaexon
TCONS_00050983-exon-scaffold_190-1575043694:5087..5480TCONS_00050983-exon-scaffold_190-1575043694:5087..5480Clytia hemisphaericaexon
TCONS_00050983-exon-scaffold_190-1491911889:6331..6661TCONS_00050983-exon-scaffold_190-1491911889:6331..6661Clytia hemisphaericaexon
TCONS_00050983-exon-scaffold_190-1510915933:6331..6661TCONS_00050983-exon-scaffold_190-1510915933:6331..6661Clytia hemisphaericaexon
TCONS_00050983-exon-scaffold_190-1575043694:6331..6661TCONS_00050983-exon-scaffold_190-1575043694:6331..6661Clytia hemisphaericaexon
TCONS_00050983-exon-scaffold_190-1491911889:7137..8254TCONS_00050983-exon-scaffold_190-1491911889:7137..8254Clytia hemisphaericaexon
TCONS_00050983-exon-scaffold_190-1510915933:7137..8254TCONS_00050983-exon-scaffold_190-1510915933:7137..8254Clytia hemisphaericaexon
TCONS_00050983-exon-scaffold_190-1575043694:7137..8254TCONS_00050983-exon-scaffold_190-1575043694:7137..8254Clytia hemisphaericaexon
TCONS_00050983-exon-scaffold_190-1491911889:16602..16821TCONS_00050983-exon-scaffold_190-1491911889:16602..16821Clytia hemisphaericaexon
TCONS_00050983-exon-scaffold_190-1510915933:16602..16821TCONS_00050983-exon-scaffold_190-1510915933:16602..16821Clytia hemisphaericaexon
TCONS_00050983-exon-scaffold_190-1575043694:16602..16821TCONS_00050983-exon-scaffold_190-1575043694:16602..16821Clytia hemisphaericaexon
TCONS_00050983-exon-scaffold_190-1491911889:18353..18510TCONS_00050983-exon-scaffold_190-1491911889:18353..18510Clytia hemisphaericaexon
TCONS_00050983-exon-scaffold_190-1510915933:18353..18510TCONS_00050983-exon-scaffold_190-1510915933:18353..18510Clytia hemisphaericaexon
TCONS_00050983-exon-scaffold_190-1575043694:18353..18510TCONS_00050983-exon-scaffold_190-1575043694:18353..18510Clytia hemisphaericaexon
TCONS_00050983-exon-scaffold_190-1491911889:19656..21942TCONS_00050983-exon-scaffold_190-1491911889:19656..21942Clytia hemisphaericaexon
TCONS_00050983-exon-scaffold_190-1510915933:19656..21942TCONS_00050983-exon-scaffold_190-1510915933:19656..21942Clytia hemisphaericaexon
TCONS_00050983-exon-scaffold_190-1575043694:19656..21942TCONS_00050983-exon-scaffold_190-1575043694:19656..21942Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_190supercontigscaffold_190:5087..21942 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.91729	6.2222	8.94664	8.61504	3.27923	2.58483	4.64802	4.27867	2.53801	2.41318	1.88523	2.25803	1.76047	1.93611	3.2092	3.16806	5.32199	5.65779	3.02097	2.89394	5.00085	4.61201	8.52164	7.58662	1.08408	1.56757	4.34019	3.59403	4.86498	5.43115
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050983 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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